MELO3C034623.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C034623.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Myb/SANT-like DNA-binding domain protein
Location	chr11 : 1885460 .. 1886564 (-)
Sequence length	1006

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTATCATGCCTATTTTTTTTACTGTTCAATTGTGAAATTACTTACGTACTCCATGTATTTTTTCTAATTTCTCATTCTCAGTATGTCAACCTCAAATCGTGCCCCGAGACATGTCTGGACGAAGGAGGAGGATTGCACTCTTGTGGAATGTTTAATGGAGTTGGTGTGAATGGGGGGATGAAAATCAGATAATGATACGTTCCGCCCAGGTTACCTTGCGCAGTTGGTACGCATGATGGCGGAGAAACTACCTGGATGTCAGGTCCGAGCAACAACTGTAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCAGGCCATTGCCGAAATGCAGGGCCCAGCGTGCAGTGGCTCTGGGTGGAACGATGAAGAGAAATGTATCATTGGGAAGAAGGAATTATTTGATAATTGGGTTAGGGTATGGAAAATCATTTAAACGTCACACAACGTTCACAATGTACATTTAGTTAACAATTTTTCAATCAGTACTCATACGTGATATTTTTTTTGCCCGCAGTCGCATCCTGCAGCGAAGGGACTCCTGAACAAATCATTCCTGTATTACGACGAACTTACATATGTCTTCGGTCGCAATAGGGTGATCAGTCGGTTCGCTGAGACATTCGCGGACGTCGGGTCTAACGAGCCTGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCTTGCCCGTGTACAGCCAGGGAATTGACCTCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCGAGTGGATCCAAGAGGAAGAGGGAAAGTCAGCAAGACTTCGATGTTGAAGCGATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCGGAGTGGCCTGCACGCAACCTTGCAAATGACAACCATGTGCGCATGGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCCTGAGGATGAGAGGGAGGGATTTTGTAGAGTCCTCCTACGAGACATAGAGAGATAG

mRNA sequence

TTTGTATCATGCCTATTTTTTTTACTGTTCAATTGTGAAATTACTTACGTACTCCATGTATTTTTTCTAATTTCTCATTCTCAGTATGTCAACCTCAAATCGTGCCCCGAGACATGTCTGGACGAAGGAGGAGGATTGCACTCTTGTGGAATGTTTAATGGAGTTGGTGTGAATGGGGGGATGAAAATCAGATAATGATACGTTCCGCCCAGGTTACCTTGCGCAGTTGGTACGCATGATGGCGGAGAAACTACCTGGATGTCAGGTCCGAGCAACAACTGTAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCAGGCCATTGCCGAAATGCAGGGCCCAGCGTGCAGTGGCTCTGGGTGGAACGATGAAGAGAAATGTATCATTGGGAAGAAGGAATTATTTGATAATTGGGTTAGGTCGCATCCTGCAGCGAAGGGACTCCTGAACAAATCATTCCTGTATTACGACGAACTTACATATGTCTTCGGTCGCAATAGGGTGATCAGTCGGTTCGCTGAGACATTCGCGGACGTCGGGTCTAACGAGCCTGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCTTGCCCGTGTACAGCCAGGGAATTGACCTCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCGAGTGGATCCAAGAGGAAGAGGGAAAGTCAGCAAGACTTCGATGTTGAAGCGATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCGGAGTGGCCTGCACGCAACCTTGCAAATGACAACCATGTGCGCATGGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCCTGAGGATGAGAGGGAGGGATTTTGTAGAGTCCTCCTACGAGACATAGAGAGATAG

Coding sequence (CDS)

ATGATGGCGGAGAAACTACCTGGATGTCAGGTCCGAGCAACAACTGTAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCAGGCCATTGCCGAAATGCAGGGCCCAGCGTGCAGTGGCTCTGGGTGGAACGATGAAGAGAAATGTATCATTGGGAAGAAGGAATTATTTGATAATTGGGTTAGGTCGCATCCTGCAGCGAAGGGACTCCTGAACAAATCATTCCTGTATTACGACGAACTTACATATGTCTTCGGTCGCAATAGGGTGATCAGTCGGTTCGCTGAGACATTCGCGGACGTCGGGTCTAACGAGCCTGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCTTGCCCGTGTACAGCCAGGGAATTGACCTCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCGAGTGGATCCAAGAGGAAGAGGGAAAGTCAGCAAGACTTCGATGTTGAAGCGATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCGGAGTGGCCTGCACGCAACCTTGCAAATGACAACCATGTGCGCATGGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCCTGAGGATGAGAGGGAGGGATTTTGTAGAGTCCTCCTACGAGACATAGAGAGATAG

Protein sequence

MMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMQGPACSGSGWNDEEKCIIGKKELFDNWVRSHPAAKGLLNKSFLYYDELTYVFGRNRVISRFAETFADVGSNEPGGGYDRFDMGDGNEDFLPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRESQQDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRMEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER

Homology

[Close]

BLAST of MELO3C034623.2.1 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 447.6 bits (1150), Expect = 2.9e-122
Identity = 234/256 (91.41%), Postives = 241/256 (94.14%), Query Frame = 0


Query: 1   MMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMQGPACSGSGWNDEEKCIIGKKELFDN 60
           MMAEKL GCQVRATTVIDCRIKTLKRTFQAIAEM GPACSG GWNDEEKCI+ +KELFDN
Sbjct: 368 MMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEMLGPACSGFGWNDEEKCIVAEKELFDN 427

Query: 61  WVRSHPAAKGLLNKSFLYYDELTYVFGRNRVISRFAETFADVGSNEPGGGYDRFDMGDGN 120
           WVRS PAAKGLLN  F YYDELTYVFGR+R   RFAETFADVGSNEPGGGYDRFDMGDGN
Sbjct: 428 WVRSPPAAKGLLNNPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGN 487

Query: 121 EDFLPVYSQGIDLSQDDVRASRPSXXXXXXXXXXXXXRKRESQQDFDVEAIHLALDQTNE 180
           EDF PVYS+G+D+ QDDVRASRPSXXXXXXXXXXXXXRKR SQ+DFDVEAIHLALDQTNE
Sbjct: 488 EDFPPVYSRGVDILQDDVRASRPSXXXXXXXXXXXXXRKRGSQRDFDVEAIHLALDQTNE 547

Query: 181 QLRQIAEWPARNLANDNHVRMEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPE 240
           QLRQIAEWPARNLANDNHVR EFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPE
Sbjct: 548 QLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPE 607

Query: 241 DEREGFCRVLLRDIER 257
           DEREGFCRVLLRDIER
Sbjct: 608 DEREGFCRVLLRDIER 623

[Close]

BLAST of MELO3C034623.2.1 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 223.4 bits (568), Expect = 8.8e-55
Identity = 108/255 (42.35%), Postives = 169/255 (66.27%), Query Frame = 0


Query: 1   MMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMQGPACSGSGWNDEEKCIIGKKELFDN 60
           MMAEKLPG  ++ ++ IDC +K+LK+T+ AIAEM+GP+CSG GWN+E +CII +++LFD+
Sbjct: 51  MMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDS 110

Query: 61  WVRSHPAAKGLLNKSFLYYDELTYVFGRNRVISRFAETFADVGSNEPGGGYDRFDMGDGN 120
           W++SHPAAKGLL+KSF YYD+L+YVFG++R     +ETF +VGSN      D   +GD +
Sbjct: 111 WIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSH 170

Query: 121 EDFLP-VYSQGIDLSQDDVRASRPSXXXXXXXXXXXXXRKRESQQDFDVEAIHLALDQTN 180
           ++ +P +YSQG+ +S D++   R               RKR S++   VE I   ++  N
Sbjct: 171 DEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGN 230

Query: 181 EQLRQIAEWPARNLANDNHVRMEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMP 240
           EQL+ IA+WP    A +  +R +  + L+++P+L S DRA L + L   ++ + GF+ +P
Sbjct: 231 EQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIP 290

Query: 241 EDEREGFCRVLLRDI 255
            + +  +C +LL++I
Sbjct: 291 TELKLEYCNILLQNI 305

[Close]

BLAST of MELO3C034623.2.1 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 221.5 bits (563), Expect = 3.3e-54
Identity = 114/257 (44.36%), Postives = 163/257 (63.42%), Query Frame = 0


Query: 1   MMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMQGPACSGSGWNDEEKCIIGKKELFDN 60
           MMA K+PG  + A+T ID RIK +KR F A+AEM+GP CSG GWNDE+KCI+ +KE+FD+
Sbjct: 406 MMAFKIPGSNIHAST-IDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDD 465

Query: 61  WVRSHPAAKGLLNKSFLYYDELTYVFGRNRVISRFAETFADVGSNEPGGGYDRFDMGDG- 120
           W  SHPAAKGLLNKSF++YDEL+YVFG++R     AE+FAD+GSN+P G    +D G   
Sbjct: 466 W--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPG----YDAGAAD 525

Query: 121 ---NEDFLPVYSQGIDLSQDDVRASRPSXXXXXXXXXXXXXRKRESQQDFDVEAIHLALD 180
              + DF P+YS G+++S DD+  +R +             RKR        + +  A++
Sbjct: 526 AMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIE 585

Query: 181 QTNEQLRQIAEWPARNLANDNHVRMEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFV 240
             NEQL +IAEWP     +    R E  R L  +PELT +DR  L R L+  +DD++ F+
Sbjct: 586 YGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFL 645

Query: 241 LMPEDEREGFCRVLLRD 254
            +P+  +  +C ++L++
Sbjct: 646 EVPDHMKYPYCSLILQE 655

[Close]

BLAST of MELO3C034623.2.1 vs. NCBI nr
Match: XP_016899497.1 (PREDICTED: uncharacterized protein LOC107990554 [Cucumis melo])

HSP 1 Score: 180.6 bits (457), Expect = 6.5e-42
Identity = 85/103 (82.52%), Postives = 92/103 (89.32%), Query Frame = 0


Query: 1   MMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMQGPACSGSGWNDEEKCIIGKKELFDN 60
           MMAEKLPGCQV ATTVID RIKTLK+TFQAIAEM+GPACSG GWND+EKCII +K LFDN
Sbjct: 1   MMAEKLPGCQVHATTVIDSRIKTLKQTFQAIAEMRGPACSGLGWNDKEKCIIAEKGLFDN 60

Query: 61  WVRSHPAAKGLLNKSFLYYDELTYVFGRNRVISRFAETFADVG 104
           WVRS+PAAK LLNK F YYDELTYVFGR++   RFAETFADVG
Sbjct: 61  WVRSYPAAKELLNKLFPYYDELTYVFGRDKATGRFAETFADVG 103

[Close]

BLAST of MELO3C034623.2.1 vs. NCBI nr
Match: XP_008459131.1 (PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo])

HSP 1 Score: 171.4 bits (433), Expect = 4.0e-39
Identity = 94/191 (49.21%), Postives = 121/191 (63.35%), Query Frame = 0


Query: 1   MMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMQGPACSGSGWNDEEKCIIGKKELFDN 60
           MMA K+PGC + A+T ID RIK LKR F A+AEM+GP CSG GWNDE+KCI+ +KE    
Sbjct: 47  MMAFKIPGCNIHAST-IDSRIKLLKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKE---- 106

Query: 61  WVRSHPAAKGLLNKSFLYYDELTYVFGRNRVISRFAETFADVGSNEPGGGYDRFDMGDGN 120
              SHPAAKGLLNKSF++YDEL+YVFG++R     AE FAD+GSN+P  GYD F + D  
Sbjct: 107 ---SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAEIFADIGSNDP-AGYDAF-VADAA 166

Query: 121 ED--FLPVYSQGIDLSQDDVRASRPSXXXXXXXXXXXXXRKRESQQDFDVEAIHLALDQT 180
            D  F P+YS  +++S DD+  +R +             RK         + +  A+   
Sbjct: 167 PDTNFSPMYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYG 226

Query: 181 NEQLRQIAEWP 190
           NEQL +IAEWP
Sbjct: 227 NEQLHRIAEWP 227

[Close]

BLAST of MELO3C034623.2.1 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 1.9e-122
Identity = 234/256 (91.41%), Postives = 241/256 (94.14%), Query Frame = 0


Query: 1   MMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMQGPACSGSGWNDEEKCIIGKKELFDN 60
           MMAEKL GCQVRATTVIDCRIKTLKRTFQAIAEM GPACSG GWNDEEKCI+ +KELFDN
Sbjct: 368 MMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEMLGPACSGFGWNDEEKCIVAEKELFDN 427

Query: 61  WVRSHPAAKGLLNKSFLYYDELTYVFGRNRVISRFAETFADVGSNEPGGGYDRFDMGDGN 120
           WVRS PAAKGLLN  F YYDELTYVFGR+R   RFAETFADVGSNEPGGGYDRFDMGDGN
Sbjct: 428 WVRSPPAAKGLLNNPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGN 487

Query: 121 EDFLPVYSQGIDLSQDDVRASRPSXXXXXXXXXXXXXRKRESQQDFDVEAIHLALDQTNE 180
           EDF PVYS+G+D+ QDDVRASRPSXXXXXXXXXXXXXRKR SQ+DFDVEAIHLALDQTNE
Sbjct: 488 EDFPPVYSRGVDILQDDVRASRPSXXXXXXXXXXXXXRKRGSQRDFDVEAIHLALDQTNE 547

Query: 181 QLRQIAEWPARNLANDNHVRMEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPE 240
           QLRQIAEWPARNLANDNHVR EFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPE
Sbjct: 548 QLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPE 607

Query: 241 DEREGFCRVLLRDIER 257
           DEREGFCRVLLRDIER
Sbjct: 608 DEREGFCRVLLRDIER 623

[Close]

BLAST of MELO3C034623.2.1 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.8e-55
Identity = 108/255 (42.35%), Postives = 169/255 (66.27%), Query Frame = 0


Query: 1   MMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMQGPACSGSGWNDEEKCIIGKKELFDN 60
           MMAEKLPG  ++ ++ IDC +K+LK+T+ AIAEM+GP+CSG GWN+E +CII +++LFD+
Sbjct: 51  MMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDS 110

Query: 61  WVRSHPAAKGLLNKSFLYYDELTYVFGRNRVISRFAETFADVGSNEPGGGYDRFDMGDGN 120
           W++SHPAAKGLL+KSF YYD+L+YVFG++R     +ETF +VGSN      D   +GD +
Sbjct: 111 WIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSH 170

Query: 121 EDFLP-VYSQGIDLSQDDVRASRPSXXXXXXXXXXXXXRKRESQQDFDVEAIHLALDQTN 180
           ++ +P +YSQG+ +S D++   R               RKR S++   VE I   ++  N
Sbjct: 171 DEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGN 230

Query: 181 EQLRQIAEWPARNLANDNHVRMEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMP 240
           EQL+ IA+WP    A +  +R +  + L+++P+L S DRA L + L   ++ + GF+ +P
Sbjct: 231 EQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIP 290

Query: 241 EDEREGFCRVLLRDI 255
            + +  +C +LL++I
Sbjct: 291 TELKLEYCNILLQNI 305

[Close]

BLAST of MELO3C034623.2.1 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.2e-54
Identity = 114/257 (44.36%), Postives = 163/257 (63.42%), Query Frame = 0


Query: 1   MMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMQGPACSGSGWNDEEKCIIGKKELFDN 60
           MMA K+PG  + A+T ID RIK +KR F A+AEM+GP CSG GWNDE+KCI+ +KE+FD+
Sbjct: 406 MMAFKIPGSNIHAST-IDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDD 465

Query: 61  WVRSHPAAKGLLNKSFLYYDELTYVFGRNRVISRFAETFADVGSNEPGGGYDRFDMGDG- 120
           W  SHPAAKGLLNKSF++YDEL+YVFG++R     AE+FAD+GSN+P G    +D G   
Sbjct: 466 W--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPG----YDAGAAD 525

Query: 121 ---NEDFLPVYSQGIDLSQDDVRASRPSXXXXXXXXXXXXXRKRESQQDFDVEAIHLALD 180
              + DF P+YS G+++S DD+  +R +             RKR        + +  A++
Sbjct: 526 AMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIE 585

Query: 181 QTNEQLRQIAEWPARNLANDNHVRMEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFV 240
             NEQL +IAEWP     +    R E  R L  +PELT +DR  L R L+  +DD++ F+
Sbjct: 586 YGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFL 645

Query: 241 LMPEDEREGFCRVLLRD 254
            +P+  +  +C ++L++
Sbjct: 646 EVPDHMKYPYCSLILQE 655

[Close]

BLAST of MELO3C034623.2.1 vs. TrEMBL
Match: tr|A0A1S4DU21|A0A1S4DU21_CUCME (uncharacterized protein LOC107990554 OS=Cucumis melo OX=3656 GN=LOC107990554 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.3e-42
Identity = 85/103 (82.52%), Postives = 92/103 (89.32%), Query Frame = 0


Query: 1   MMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMQGPACSGSGWNDEEKCIIGKKELFDN 60
           MMAEKLPGCQV ATTVID RIKTLK+TFQAIAEM+GPACSG GWND+EKCII +K LFDN
Sbjct: 1   MMAEKLPGCQVHATTVIDSRIKTLKQTFQAIAEMRGPACSGLGWNDKEKCIIAEKGLFDN 60

Query: 61  WVRSHPAAKGLLNKSFLYYDELTYVFGRNRVISRFAETFADVG 104
           WVRS+PAAK LLNK F YYDELTYVFGR++   RFAETFADVG
Sbjct: 61  WVRSYPAAKELLNKLFPYYDELTYVFGRDKATGRFAETFADVG 103

[Close]

BLAST of MELO3C034623.2.1 vs. TrEMBL
Match: tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME (uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.6e-39
Identity = 94/191 (49.21%), Postives = 121/191 (63.35%), Query Frame = 0


Query: 1   MMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMQGPACSGSGWNDEEKCIIGKKELFDN 60
           MMA K+PGC + A+T ID RIK LKR F A+AEM+GP CSG GWNDE+KCI+ +KE    
Sbjct: 47  MMAFKIPGCNIHAST-IDSRIKLLKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKE---- 106

Query: 61  WVRSHPAAKGLLNKSFLYYDELTYVFGRNRVISRFAETFADVGSNEPGGGYDRFDMGDGN 120
              SHPAAKGLLNKSF++YDEL+YVFG++R     AE FAD+GSN+P  GYD F + D  
Sbjct: 107 ---SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAEIFADIGSNDP-AGYDAF-VADAA 166

Query: 121 ED--FLPVYSQGIDLSQDDVRASRPSXXXXXXXXXXXXXRKRESQQDFDVEAIHLALDQT 180
            D  F P+YS  +++S DD+  +R +             RK         + +  A+   
Sbjct: 167 PDTNFSPMYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYG 226

Query: 181 NEQLRQIAEWP 190
           NEQL +IAEWP
Sbjct: 227 NEQLHRIAEWP 227

The following BLAST results are available for this feature:

BLAST of MELO3C034623.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33754.1	2.9e-122	91.41	retrotransposon protein [Cucumis melo subsp. melo]	[more]
XP_008441954.1	8.8e-55	42.35	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]	[more]
ADN34114.1	3.3e-54	44.36	retrotransposon protein [Cucumis melo subsp. melo]	[more]
XP_016899497.1	6.5e-42	82.52	PREDICTED: uncharacterized protein LOC107990554 [Cucumis melo]	[more]
XP_008459131.1	4.0e-39	49.21	PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo]	[more]

BLAST of MELO3C034623.2.1 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C034623.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C034623.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GBB2\|E5GBB2_CUCME	1.9e-122	91.41	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3B4L3\|A0A1S3B4L3_CUCME	5.8e-55	42.35	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
tr\|E5GCB5\|E5GCB5_CUCME	2.2e-54	44.36	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S4DU21\|A0A1S4DU21_CUCME	4.3e-42	82.52	uncharacterized protein LOC107990554 OS=Cucumis melo OX=3656 GN=LOC107990554 PE=...	[more]
tr\|A0A1S3C8Z4\|A0A1S3C8Z4_CUCME	2.6e-39	49.21	uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C034623.2	MELO3C034623.2	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C034623.2.1.five_prime_UTR.1	MELO3C034623.2.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C034623.2.1.exon.2	MELO3C034623.2.1.exon.2	exon
MELO3C034623.2.1.exon.1	MELO3C034623.2.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C034623.2.1.CDS.2	MELO3C034623.2.1.CDS.2	CDS
MELO3C034623.2.1.CDS.1	MELO3C034623.2.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C034623.2.1	MELO3C034623.2.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..163
None	No IPR available	PANTHER	PTHR31704:SF62	SUBFAMILY NOT NAMED	coord: 2..139
None	No IPR available	PANTHER	PTHR31704	FAMILY NOT NAMED	coord: 2..139