MELO3C034606.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C034606.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	ATP-binding/protein serine/threonine kinase
Location	chr11 : 1534525 .. 1534995 (-)
Sequence length	373

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAATCACATAATACTCACCCACTAGACATTTGATATGGTGAAGTCCTCAACTAAGTTTGCTCTCTTGTTTTTAATGTTCTTTATTATCTCAGGTATATAAATCCATTTCATTTATTTTTAATAGATAATTTTTTTTTCTTTTCGCGAATGTTATCTTATCATATGACAAATAATTATTAAAATATTTCAGAAACATTCGTGGCAGATGCCAGAAATGTCGTAAACATTCCATGCAATAGTCGCATTGATTGTTCTGATCCATGGGATTGTGATTGCAAGCTCAACCTATGTTTTTGCCACCCACATGGATTGAAAAAGAAATTGCTTCACAAAGACTTTCCCGAATATTTGGGAGAAGAAAAGACAACACCGCTCCTTAAAAATTGAATGGGAAATATTAACATATATTCTCCACTCCCAAATTAGATCTACCTACATAGCTCATAAATCGATAGAAATGTATTTTCAC

mRNA sequence

CCAAATCACATAATACTCACCCACTAGACATTTGATATGGTGAAGTCCTCAACTAAGTTTGCTCTCTTGTTTTTAATGTTCTTTATTATCTCAGAAACATTCGTGGCAGATGCCAGAAATGTCGTAAACATTCCATGCAATAGTCGCATTGATTGTTCTGATCCATGGGATTGTGATTGCAAGCTCAACCTATGTTTTTGCCACCCACATGGATTGAAAAAGAAATTGCTTCACAAAGACTTTCCCGAATATTTGGGAGAAGAAAAGACAACACCGCTCCTTAAAAATTGAATGGGAAATATTAACATATATTCTCCACTCCCAAATTAGATCTACCTACATAGCTCATAAATCGATAGAAATGTATTTTCAC

Coding sequence (CDS)

ATGGTGAAGTCCTCAACTAAGTTTGCTCTCTTGTTTTTAATGTTCTTTATTATCTCAGAAACATTCGTGGCAGATGCCAGAAATGTCGTAAACATTCCATGCAATAGTCGCATTGATTGTTCTGATCCATGGGATTGTGATTGCAAGCTCAACCTATGTTTTTGCCACCCACATGGATTGAAAAAGAAATTGCTTCACAAAGACTTTCCCGAATATTTGGGAGAAGAAAAGACAACACCGCTCCTTAAAAATTGA

Protein sequence

MVKSSTKFALLFLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGLKKKLLHKDFPEYLGEEKTTPLLKN

Homology

[Close]

BLAST of MELO3C034606.2.1 vs. NCBI nr
Match: KGN61993.1 (hypothetical protein Csa_2G285280 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 8.7e-36
Identity = 74/83 (89.16%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 1  MVKSSTKFALLFLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60
          MVKSSTK ALL LMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL
Sbjct: 1  MVKSSTKLALLLLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60

Query: 61 KKKLLHKDFPEYLGEEKTTPLLK 84
          +KK LH  FPE+L EEKTT LLK
Sbjct: 61 EKKFLHNAFPEHLREEKTTSLLK 83

[Close]

BLAST of MELO3C034606.2.1 vs. NCBI nr
Match: KGN61957.1 (hypothetical protein Csa_2G276990 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 3.0e-28
Identity = 63/78 (80.77%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 1  MVKSSTKFALLFLMFFIISE-TFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHG 60
          MVK  TKFAL FLM FIISE  FV+DARNVVNIPC SRIDCSDPWDCDCKLNLCFCHPHG
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 LKKKLLHKDFPEYLGEEK 78
          L+KK LHK FPE L E++
Sbjct: 61 LEKKFLHKAFPESLREDR 78

[Close]

BLAST of MELO3C034606.2.1 vs. NCBI nr
Match: OMO57769.1 (ATP-binding/protein serine/threonine kinase [Corchorus olitorius])

HSP 1 Score: 55.5 bits (132), Expect = 1.0e-04
Identity = 29/75 (38.67%), Postives = 44/75 (58.67%), Query Frame = 0


Query: 2  VKSSTKFALLFLMFFIIS---ETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPH 61
          ++ +T   ++FL   +I+        +ARN +NIPCN+  DC DP  C+C++NLCFCHP 
Sbjct: 1  MEKTTLMKMIFLAALLINFAGSQVGVEARN-INIPCNTIKDCPDPVKCECRINLCFCHPA 60

Query: 62 GLKKKLLH--KDFPE 72
           +     H  KD P+
Sbjct: 61 AMFVAANHVAKDNPK 74

[Close]

BLAST of MELO3C034606.2.1 vs. NCBI nr
Match: EOY32073.1 (Uncharacterized protein TCM_039538 [Theobroma cacao])

HSP 1 Score: 53.9 bits (128), Expect = 3.0e-04
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 8  FALLF---LMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 58
          F L+F   L+ F +      +ARN +N PCN+  DC+DP  C+C++NLCFCHP
Sbjct: 6  FKLIFLATLLVFALGLQVGVEARN-INTPCNTVKDCADPIKCECRMNLCFCHP 57

[Close]

BLAST of MELO3C034606.2.1 vs. NCBI nr
Match: EOY32074.1 (Uncharacterized protein TCM_039540 [Theobroma cacao])

HSP 1 Score: 53.9 bits (128), Expect = 3.0e-04
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 8  FALLF---LMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 58
          F L+F   L+ F +      +ARN +N PCN+  DC+DP  C+C++NLCFCHP
Sbjct: 6  FKLIFLAALLVFALGLQVGVEARN-INTPCNTVKDCADPIKCECRINLCFCHP 57

[Close]

BLAST of MELO3C034606.2.1 vs. TrEMBL
Match: tr|A0A0A0LJR0|A0A0A0LJR0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.8e-36
Identity = 74/83 (89.16%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 1  MVKSSTKFALLFLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60
          MVKSSTK ALL LMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL
Sbjct: 1  MVKSSTKLALLLLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60

Query: 61 KKKLLHKDFPEYLGEEKTTPLLK 84
          +KK LH  FPE+L EEKTT LLK
Sbjct: 61 EKKFLHNAFPEHLREEKTTSLLK 83

[Close]

BLAST of MELO3C034606.2.1 vs. TrEMBL
Match: tr|A0A0A0LMG3|A0A0A0LMG3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.0e-28
Identity = 63/78 (80.77%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 1  MVKSSTKFALLFLMFFIISE-TFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHG 60
          MVK  TKFAL FLM FIISE  FV+DARNVVNIPC SRIDCSDPWDCDCKLNLCFCHPHG
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 LKKKLLHKDFPEYLGEEK 78
          L+KK LHK FPE L E++
Sbjct: 61 LEKKFLHKAFPESLREDR 78

[Close]

BLAST of MELO3C034606.2.1 vs. TrEMBL
Match: tr|A0A1R3GI95|A0A1R3GI95_9ROSI (ATP-binding/protein serine/threonine kinase OS=Corchorus olitorius OX=93759 GN=COLO4_35133 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.9e-05
Identity = 29/75 (38.67%), Postives = 44/75 (58.67%), Query Frame = 0


Query: 2  VKSSTKFALLFLMFFIIS---ETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPH 61
          ++ +T   ++FL   +I+        +ARN +NIPCN+  DC DP  C+C++NLCFCHP 
Sbjct: 1  MEKTTLMKMIFLAALLINFAGSQVGVEARN-INIPCNTIKDCPDPVKCECRINLCFCHPA 60

Query: 62 GLKKKLLH--KDFPE 72
           +     H  KD P+
Sbjct: 61 AMFVAANHVAKDNPK 74

[Close]

BLAST of MELO3C034606.2.1 vs. TrEMBL
Match: tr|A0A061GY75|A0A061GY75_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039540 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-04
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 8  FALLF---LMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 58
          F L+F   L+ F +      +ARN +N PCN+  DC+DP  C+C++NLCFCHP
Sbjct: 6  FKLIFLAALLVFALGLQVGVEARN-INTPCNTVKDCADPIKCECRINLCFCHP 57

[Close]

BLAST of MELO3C034606.2.1 vs. TrEMBL
Match: tr|A0A061GRN9|A0A061GRN9_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039538 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-04
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 8  FALLF---LMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 58
          F L+F   L+ F +      +ARN +N PCN+  DC+DP  C+C++NLCFCHP
Sbjct: 6  FKLIFLATLLVFALGLQVGVEARN-INTPCNTVKDCADPIKCECRMNLCFCHP 57

The following BLAST results are available for this feature:

BLAST of MELO3C034606.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61993.1	8.7e-36	89.16	hypothetical protein Csa_2G285280 [Cucumis sativus]	[more]
KGN61957.1	3.0e-28	80.77	hypothetical protein Csa_2G276990 [Cucumis sativus]	[more]
OMO57769.1	1.0e-04	38.67	ATP-binding/protein serine/threonine kinase [Corchorus olitorius]	[more]
EOY32073.1	3.0e-04	47.17	Uncharacterized protein TCM_039538 [Theobroma cacao]	[more]
EOY32074.1	3.0e-04	47.17	Uncharacterized protein TCM_039540 [Theobroma cacao]	[more]

BLAST of MELO3C034606.2.1 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C034606.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C034606.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LJR0\|A0A0A0LJR0_CUCSA	5.8e-36	89.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1	[more]
tr\|A0A0A0LMG3\|A0A0A0LMG3_CUCSA	2.0e-28	80.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1	[more]
tr\|A0A1R3GI95\|A0A1R3GI95_9ROSI	6.9e-05	38.67	ATP-binding/protein serine/threonine kinase OS=Corchorus olitorius OX=93759 GN=C...	[more]
tr\|A0A061GY75\|A0A061GY75_THECC	2.0e-04	47.17	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039540 PE=4 SV=1	[more]
tr\|A0A061GRN9\|A0A061GRN9_THECC	2.0e-04	47.17	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039538 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016301	kinase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C034606.2	MELO3C034606.2	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C034606.2.1	MELO3C034606.2.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C034606.2.1.five_prime_UTR.1	MELO3C034606.2.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C034606.2.1.exon.2	MELO3C034606.2.1.exon.2	exon
MELO3C034606.2.1.exon.1	MELO3C034606.2.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C034606.2.1.CDS.2	MELO3C034606.2.1.CDS.2	CDS
MELO3C034606.2.1.CDS.1	MELO3C034606.2.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C034606.2.1.three_prime_UTR.1	MELO3C034606.2.1.three_prime_UTR.1	three_prime_UTR