MELO3C034543.2.1 (mRNA) Melon (DHL92) v3.6.1

Overview
NameMELO3C034543.2.1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionzinc finger BED domain-containing protein RICESLEEPER 3-like
Locationchr10 : 26230947 .. 26236753 (+)
Sequence length2115
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCGGTCCAGACTCCCTTTCTCCAGGTACTCATACACAAGGAGACGATTCTGGCCCTCAATGCAACATCCATGCAACTTCACGAGGTTGCGATGCTGCACAGCGGATAATGTAGAAATCTCAGCCACAAATTGGTTCCTTCCTTGACCAGATTTAACAGAAAGTTGCTTCACTGCAATTACTCTTCCATCATTTAGTATTCCCTACAAGTAAAATAACATGTTAAGAACAATATTTGATAAGGATGTTATTGGAATAACGTATATTATTGTTACAGCATGTATTTATATATGTTATTGATTTGAGTGTTTTTTTCTATGTGTTTTGTTTGATGATTATTAGGATGACTTCATTCTCGGTAGACGAGACTTCAAATCAGAGTTGTTCTAGTCCAGTGTTAGGAAAAAGAAAACCGGTTAAACCACCATCATTGGTATGGGAACATTTTATAAAAGTAGAAGGATGTGATCCTAAATATCCTAGGGCTGCTTGTAAACATTGTGGGACTTCATATGCTTGTGATTCCAAAAGAAATGGTACCATGAATTTAAAAAGACATTTAGAGAAATGTAAGATGTATGTAAATTCATTGGAAGATAATATTGAAAGAGAGAGAGATTCTGAAAGTAGTTTGATGGCTGCATCATTGACTCAAGAAAATTTTAGAAAAATGCTTGCTAGGATGGTTATCTTGGATGAATTGCCATTTAAGTTCGTAGAAACTGAAGGGTTTCACCAATTTTGTCGGGCATTAAATCCAAAGTTTGTGATTCCATCAAGAGTAACCGTTGCAAAAGATTGTTTTCAAATGTATATGAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaattatcccatataagctaactgtttgtcattttgatctagaattcataaacataggAAAGGAGATGGAAGCTGCATTTGAGAATTTGAATAATGACTCTATGGTTTAAATCCCTACTCTCAAATCTTTATTTACATTTTTTTAAAATTGTTAACTTGTTAAATATCGAATGTTGTTTTTTTAGAGTCTTGAAGCTCAGTGATGGAAGCACTTTGGGTTATACAAATAAGGTGGTCTCGTGAAAATGTTCATTAATTCATACCTTCACACTTGTAAACTCTATTGTTTGCATAAGGATTTGAAGGGCCAGTAGCTTCTCTACTATCAACTCTTTAATCCCGCTATGTGTGTCCTCAGAAGATTCTTAGTTTATTTTCCTTTGTTTTCTATTTTTCATTTTTAAGTAATATACTTTAGTAATATACTTTATGTGCAGTTTTCACTTTTTATCCCAGTGTAGATATATGTTTTTCTCTCATAGGTACAAATTAAAGAACTAACTATACTTTATTTAGCTTTTGATTATCATTTGGGAGATGGACAAGCTTGTGTTGTCACCATTATCGTTGCCTTTGATTATTTATTCTCATGGTTTCCATTTTCATTTTTAGTGTGAACTGTGAGAATTTATATATTTAATTTCGATCTTCCTTCACTTTATTGGGTGCTTCTATTTTTCTTCTTCTAAAAGAGATAAAGATGCTTCATCAATAAGTGGACTTCAATAAGCATTTTGCCCATAAGTTATGTGTCTAATTGTTTCAAGGAGCTAATTGTTTATTTTGGTGTATAACGTTGGACCCATATTTATTTTCATTGAAGTGGTTTCTAAATAAATTTTTCATTCATGTAAATTATACCCATATTTATTTTATTTTATGCTTCATCAATAAAAGGAGGAGGAGGAAAAAAAAAAACGACCTGACCCAACCCATTCGGCCCGACCCGAATGTGGGTCTGGTCGGGTCGGGTTTAAAAAATAACCGTACATTTCGGGTCGGTCGGTTTTGAAGAAAACCCGACCCGACCCAATTACACCCCTACCGTGCACATCCCTTTTCCTTGGATTGCCTTGCCGGATCCCATGATGACCCCAAATTGGTCATCTCTGTTGTAGGGACTTTTAACTCCTCCACCAGCTTTAAGGAGATGAAATTATGTGTGGCCCCGCAATCGATCATCACCACGACTTCCCGCTCTTCCATTTTTCTTTTAATCTTAAACGTACCCGGAGCCGTGAGACCAACCACTGAGTTCAGAGATAGCTCGACGACAGGACTGACCTCCACCATTCCTTCTTCGATTTCCATCTCTCCCATTTCTGCGTCGTCAAGGTTGTCGGCTACCACACACAGTCGGAGCTCCTTGTTCTTGCAGCGGTGGCCTTTGCTGAACGGTTCGTCACACCGATAGCATAAACCATTCTCTTTCCTCGCTTGTAGCTCAGAGTCGGTCCACCGTCGAAAGGGATGTTCGCGTCGGCCTCCCCCTCCCACGGTATTAGGTTGAAATGTGTTTGAATTTGACGGATGGGGGAAAACTTTTTCCGCCAAGGTCACCATCTTCGTGGTCGGGCTTTCGTAATTTTTTGGGCTCAGTTTTGGGTTTGTTTTCGCGGCCTCCTTCGGGTACGGGTGTGGGCCACCCTTTGCCACTTCAATCTTTTCTTCCGCAAGTTGGGCTGCCTCCATCAGATCTTCAAGGCCCACGGCCCTCATGGAGAATACCTCTTTTCTAATTATTGGGTCCAGACCGTTGGTGAATGTTCCCTCCAAAACATCTTCTGCAATCTCCGGTAGGGGCACCGATAGTTCTTCAAACTTTTGCAGACATTCACTCACCGAACCTTCCTACTTGACTGCCAAAAATCTTGCACACGCCGTTCCGTGTTCTCTATTCCGGAATCGATTATATATTCTTTCTTTCAACTCCTTCCAAGATCTGAACCGTTTTCGGTTTTCTGCCCATCTAAACCAGCTCAATCCCTTTCCTTTCAAGCTAACCATGACGATCTTTAGCTTTTCCCGTTCATTCAAGAGATGCATTTGGAAGTAGTGTTCCGCCCTGTAAAACCATCCATCCGGATCCTCCCCGTTAAAAACCGGCATTTCTAATTTCTTGAACTTGATCCTATCCTGTCCTGCCCCTATTTCCACGCTCAAAGACGTCTCCCCTTTTCCCCCTCCTCTTCAGCCGTGTCTTTATTCCTGAGCTTCCTCTTCCTGGTGCTTATCCCGGTCATTTTTGAACCTCCCAGCTGTCTCTGGCGGTCCTCGTAAATCGCCAATATAGTCTCCGAACCTCTTGTTTAATCGCCTCGATCTCTGCTTCTGAAGCGGTTAAACGATCCTCTATCATCTTTTGCGTCATCTTCTTCCACCTCCCCAGATTGTCGACTCGCTCGGCTAACAATGTTAGCGCCCGAGGTTCCTGTTACAATAATACCAGCACACACAAACTAACAGCTAACACAACACAAGAACAAGTTATCACACAACACTCTATATCAATCCGAGGCAATCTGGAACTTATATATTTATATAGGAATGATCATTCATTACAAAAGGTTACCACAAAATGATTACAGCCAAATGAGAGGGTTGTTCTCTCCCAAATGAACAAGGTAGTCCATTCGAAACATTCCAAACATTCCAATGCCTAACCCTAGCTAAACGCTCCCCTATATATAAACTCCTTTTGCTGCTGCCACATGCCCCAGGGACCACTGGCCATTTCAACTACCATTTTGTCTATGCTGAAATGCCTTTCTTACCTTTTTTCCTCTTTCTATGATAAACTTGGATAATTGGAGGCCTAGCAAAGTCACAGTCGAGTCTACCACACTCAAAAGAATGGTGACAAGAAGCTTCACTTTATCACCTCAAACTCAAGGACAGTTGGATAAGCACTACTAACACTACTGTTTCACTTACTAATTTATAAGCATGTAATTGTATTAGATATGAGCATCGTGATTTGAGACAACCAGAAACAAGACTCATGGGTCATTTAAAGGAATTAAATATACCTTGTAAACGGGTCCAAACCCCCCTTCTCCAAGCTTGTTGGATGAACTAAAATCCTCCGTGGCATTCCTTAGTTCAGAATAACCGTAGGTGTGAGGTCTCTCGTCAATTCCGAAGAGTTCTGCAATGGTAAAGAATATATAAGTAGATTGTGGATAGGTTTCATTACCTTTCCTCTCGAATCATTCTGATGGGAGAAAATGAGGCACCGAAGGACTAAGGGTGGTTGTGGCACACCTTTTAGTTTAAGCATTTCTTAGAAAAACACACCTTTAAAAAAAAAACCAAAACAAAACAAAAACAACATGCTCTAATTTATGCATACTGTTATATTTTTTTCTTGAAGTGCCTTCAATAGAAAAATTGTTTGATTGCATTACTATAGGGTTTCCCCTCCACGATTGAACTGCAAAATTCAATGAACAATATTACAACAACAAAAAAACACAACAATGTTCAACTGATTTCCCTTCGCCAAGAATTCCAAAAACAACACAGGAAGCAGCTAGACAGAATAAGAAAAAAGGCTATCAGCAACCAGCTATGTCAGCTATTTCTAGATAGCTAA

mRNA sequence

ATGCTCGGTCCAGACTCCCTTTCTCCAGGTACTCATACACAAGGAGACGATTCTGGCCCTCAATGCAACATCCATGCAACTTCACGAGGTTGCGATGCTGCACAGCGGATAATGATGACTTCATTCTCGGTAGACGAGACTTCAAATCAGAGTTGTTCTAGTCCAGTGTTAGGAAAAAGAAAACCGGTTAAACCACCATCATTGGTATGGGAACATTTTATAAAAGTAGAAGGATGTGATCCTAAATATCCTAGGGCTGCTTGTAAACATTGTGGGACTTCATATGCTTGTGATTCCAAAAGAAATGGTACCATGAATTTAAAAAGACATTTAGAGAAATGTAAGATGTATGTAAATTCATTGGAAGATAATATTGAAAGAGAGAGAGATTCTGAAAGTAGTTTGATGGCTGCATCATTGACTCAAGAAAATTTTAGAAAAATGCTTGCTAGGATGGTTATCTTGGATGAATTGCCATTTAAGTTCGTAGAAACTGAAGGGTTTCACCAATTTTGTCGGGCATTAAATCCAAAGTTTGTGATTCCATCAAGAGTAACCGTTGCAAAAGATTGTTTTCAAATAGTCTTGAAGCTCAGTGATGGAAGCACTTTGGGTTATACAAATAAGGAGGAGGAGGAAAAAAAAAAACGACCTGACCCAACCCATTCGGCCCGACCCGAATGTGGGTCTGGTCGGGTCGGAAAACCCGACCCGACCCAATTACACCCCTACCGTGCACATCCCTTTTCCTTGGATTGCCTTGCCGGATCCCATGATGACCCCAAATTGGTCATCTCTGTTGTAGGGACTTTTAACTCCTCCACCAGCTTTAAGGAGATGAAATTATGTGTGGCCCCGCAATCGATCATCACCACGACTTCCCGCTCTTCCATTTTTCTTTTAATCTTAAACGTACCCGGAGCCGTGAGACCAACCACTGAGTTCAGAGATAGCTCGACGACAGGACTGACCTCCACCATTCCTTCTTCGATTTCCATCTCTCCCATTTCTGCGTCGTCAAGGTTGTCGGCTACCACACACAGTCGGAGCTCCTTGTTCTTGCAGCGGTGGCCTTTGCTGAACGCTCAGAGTCGGTCCACCGTCGAAAGGGATGTTCGCGTCGGCCTCCCCCTCCCACGTTTTGGGTTTGTTTTCGCGGCCTCCTTCGGGTACGGGTGTGGGCCACCCTTTGCCACTTCAATCTTTTCTTCCGCAAGTTGGGCTGCCTCCATCAGATCTTCAAGGCCCACGGCCCTCATGGAGAATACCTCTTTTCTAATTATTGGGTCCAGACCGTTGGTGAATGTTCCCTCCAAAACATCTTCTGCAATCTCCGGTAGGGGCACCGATAGTTCTTCAAACTTTTGCAGACATTCACTCACCGAACCTTCCTACTTGACTGCCAAAAATCTTGCACACGCCGTTCCGTGTTCTCTATTCCGGAATCGATTATATATTCTTTCTTTCAACTCCTTCCAAGATCTGAACCGTTTTCGGTTTTCTGCCCATCTAAACCAGCTCAATCCCTTTCCTTTCAAGCTAACCATGACGATCTTTAGCTTTTCCCAGATGCATTTGGAAGTAGTGTTCCGCCCTGTAAAACCATCCATCCGGATCCTCCCCCTGTCTCTGGCGGTCCTCGTAAATCGCCAATATAGTCTCCGAACCTCTTGTTTAATCGCCTCGATCTCTGCTTCTGAAGCGGTTAAACGATCCTCTATCATCTTTTGCGTCATCTTCTTCCACCTCCCCAGATTGTCGACTCGCTCGGCTAACAATGTTAGCGCCCGAGGTTCCTGTTACAATAATACCAGCACACACAAACTAACAGCTAACACAACACAAGAACAAGTTATCACACAACACTCTATATCAATCCGAGGCAATCTGGAACTTATATATTTATATAGGAATGATCATTCATTACAAAAGGGTTTCCCCTCCACGATTGAACTGCAAAATTCAATGAACAATATTACAACAACAAAAAAACACAACAATGTTCAACTGATTTCCCTTCGCCAAGAATTCCAAAAACAACACAGGAAGCAGCTAGACAGAATAAGAAAAAAGGCTATCAGCAACCAGCTATGTCAGCTATTTCTAGATAGCTAA

Coding sequence (CDS)

ATGCTCGGTCCAGACTCCCTTTCTCCAGGTACTCATACACAAGGAGACGATTCTGGCCCTCAATGCAACATCCATGCAACTTCACGAGGTTGCGATGCTGCACAGCGGATAATGATGACTTCATTCTCGGTAGACGAGACTTCAAATCAGAGTTGTTCTAGTCCAGTGTTAGGAAAAAGAAAACCGGTTAAACCACCATCATTGGTATGGGAACATTTTATAAAAGTAGAAGGATGTGATCCTAAATATCCTAGGGCTGCTTGTAAACATTGTGGGACTTCATATGCTTGTGATTCCAAAAGAAATGGTACCATGAATTTAAAAAGACATTTAGAGAAATGTAAGATGTATGTAAATTCATTGGAAGATAATATTGAAAGAGAGAGAGATTCTGAAAGTAGTTTGATGGCTGCATCATTGACTCAAGAAAATTTTAGAAAAATGCTTGCTAGGATGGTTATCTTGGATGAATTGCCATTTAAGTTCGTAGAAACTGAAGGGTTTCACCAATTTTGTCGGGCATTAAATCCAAAGTTTGTGATTCCATCAAGAGTAACCGTTGCAAAAGATTGTTTTCAAATAGTCTTGAAGCTCAGTGATGGAAGCACTTTGGGTTATACAAATAAGGAGGAGGAGGAAAAAAAAAAACGACCTGACCCAACCCATTCGGCCCGACCCGAATGTGGGTCTGGTCGGGTCGGAAAACCCGACCCGACCCAATTACACCCCTACCGTGCACATCCCTTTTCCTTGGATTGCCTTGCCGGATCCCATGATGACCCCAAATTGGTCATCTCTGTTGTAGGGACTTTTAACTCCTCCACCAGCTTTAAGGAGATGAAATTATGTGTGGCCCCGCAATCGATCATCACCACGACTTCCCGCTCTTCCATTTTTCTTTTAATCTTAAACGTACCCGGAGCCGTGAGACCAACCACTGAGTTCAGAGATAGCTCGACGACAGGACTGACCTCCACCATTCCTTCTTCGATTTCCATCTCTCCCATTTCTGCGTCGTCAAGGTTGTCGGCTACCACACACAGTCGGAGCTCCTTGTTCTTGCAGCGGTGGCCTTTGCTGAACGCTCAGAGTCGGTCCACCGTCGAAAGGGATGTTCGCGTCGGCCTCCCCCTCCCACGTTTTGGGTTTGTTTTCGCGGCCTCCTTCGGGTACGGGTGTGGGCCACCCTTTGCCACTTCAATCTTTTCTTCCGCAAGTTGGGCTGCCTCCATCAGATCTTCAAGGCCCACGGCCCTCATGGAGAATACCTCTTTTCTAATTATTGGGTCCAGACCGTTGGTGAATGTTCCCTCCAAAACATCTTCTGCAATCTCCGGTAGGGGCACCGATAGTTCTTCAAACTTTTGCAGACATTCACTCACCGAACCTTCCTACTTGACTGCCAAAAATCTTGCACACGCCGTTCCGTGTTCTCTATTCCGGAATCGATTATATATTCTTTCTTTCAACTCCTTCCAAGATCTGAACCGTTTTCGGTTTTCTGCCCATCTAAACCAGCTCAATCCCTTTCCTTTCAAGCTAACCATGACGATCTTTAGCTTTTCCCAGATGCATTTGGAAGTAGTGTTCCGCCCTGTAAAACCATCCATCCGGATCCTCCCCCTGTCTCTGGCGGTCCTCGTAAATCGCCAATATAGTCTCCGAACCTCTTGTTTAATCGCCTCGATCTCTGCTTCTGAAGCGGTTAAACGATCCTCTATCATCTTTTGCGTCATCTTCTTCCACCTCCCCAGATTGTCGACTCGCTCGGCTAACAATGTTAGCGCCCGAGGTTCCTGTTACAATAATACCAGCACACACAAACTAACAGCTAACACAACACAAGAACAAGTTATCACACAACACTCTATATCAATCCGAGGCAATCTGGAACTTATATATTTATATAGGAATGATCATTCATTACAAAAGGGTTTCCCCTCCACGATTGAACTGCAAAATTCAATGAACAATATTACAACAACAAAAAAACACAACAATGTTCAACTGATTTCCCTTCGCCAAGAATTCCAAAAACAACACAGGAAGCAGCTAGACAGAATAAGAAAAAAGGCTATCAGCAACCAGCTATGTCAGCTATTTCTAGATAGCTAA

Protein sequence

MLGPDSLSPGTHTQGDDSGPQCNIHATSRGCDAAQRIMMTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAASLTQENFRKMLARMVILDELPFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQIVLKLSDGSTLGYTNKEEEEKKKRPDPTHSARPECGSGRVGKPDPTQLHPYRAHPFSLDCLAGSHDDPKLVISVVGTFNSSTSFKEMKLCVAPQSIITTTSRSSIFLLILNVPGAVRPTTEFRDSSTTGLTSTIPSSISISPISASSRLSATTHSRSSLFLQRWPLLNAQSRSTVERDVRVGLPLPRFGFVFAASFGYGCGPPFATSIFSSASWAASIRSSRPTALMENTSFLIIGSRPLVNVPSKTSSAISGRGTDSSSNFCRHSLTEPSYLTAKNLAHAVPCSLFRNRLYILSFNSFQDLNRFRFSAHLNQLNPFPFKLTMTIFSFSQMHLEVVFRPVKPSIRILPLSLAVLVNRQYSLRTSCLIASISASEAVKRSSIIFCVIFFHLPRLSTRSANNVSARGSCYNNTSTHKLTANTTQEQVITQHSISIRGNLELIYLYRNDHSLQKGFPSTIELQNSMNNITTTKKHNNVQLISLRQEFQKQHRKQLDRIRKKAISNQLCQLFLDS
Homology
[Close]
BLAST of MELO3C034543.2.1 vs. NCBI nr
Match: ACX85638.1 (putative transposase [Cucumis melo])

HSP 1 Score: 301.6 bits (771), Expect = 7.0e-78
Identity = 144/159 (90.57%), Postives = 149/159 (93.71%), Query Frame = 0 

Query: 39  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACD 98
           MTSFSVDETSNQSCSSPVLGKRKPVKPPS VWEHFIKVEGCDPKYPRAACKHCG SYACD
Sbjct: 1   MTSFSVDETSNQSCSSPVLGKRKPVKPPSSVWEHFIKVEGCDPKYPRAACKHCGASYACD 60

Query: 99  SKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAASLTQENFRKMLARMVILDEL 158
           SKRNGT NLKRHLEKCKMYVN LEDN+E E DSES+LM AS TQEN RKMLARMVILDEL
Sbjct: 61  SKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESNLMTASFTQENCRKMLARMVILDEL 120

Query: 159 PFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQIVLK 198
           PFKFVE+EGFHQFCRALNPKFVIPSRVTVAKDCFQ+ +K
Sbjct: 121 PFKFVESEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMK 159

[Close]
BLAST of MELO3C034543.2.1 vs. NCBI nr
Match: CAN61798.1 (hypothetical protein VITISV_044291 [Vitis vinifera])

HSP 1 Score: 151.0 bits (380), Expect = 1.5e-32
Identity = 76/150 (50.67%), Postives = 94/150 (62.67%), Query Frame = 0 

Query: 59  KRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEK-CKMY 118
           KRKP KPPS VW+HF KV+ CDP YPRA C +CG  YAC  KRN T N+K HL   C+ +
Sbjct: 28  KRKPTKPPSEVWDHFTKVKECDPNYPRATCNYCGIDYACHDKRNETSNMKAHLASGCQKH 87

Query: 119 VNSLEDNIERERDSES-------------SLMAASLTQENFRKMLARMVILDELPFKFVE 178
               +D  ++    +S             +L+A S   E+ RKMLARM+I+DEL F+FV+
Sbjct: 88  PFRCKDPKQKTLSFQSKXXXXXXXXXSGYTLLATSFNVEHCRKMLARMIIVDELAFRFVQ 147

Query: 179 TEGFHQFCRALNPKFVIPSRVTVAKDCFQI 195
            EGF  FC  L PKF IPSR TVAKDC Q+
Sbjct: 148 GEGFRAFCSPLQPKFFIPSRATVAKDCSQL 177

[Close]
BLAST of MELO3C034543.2.1 vs. NCBI nr
Match: XP_025679003.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Arachis hypogaea])

HSP 1 Score: 138.3 bits (347), Expect = 1.0e-28
Identity = 70/151 (46.36%), Postives = 95/151 (62.91%), Query Frame = 0 

Query: 58  GKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRH-LEKCKM 117
           GKRKP++P S  W+HF K E  +P+YPRA C  CG SYACD+ +NGT N+K H L +CK 
Sbjct: 269 GKRKPIRPRSWTWDHFTKDETSNPQYPRAKCNWCGASYACDTHKNGTSNMKNHLLSQCKK 328

Query: 118 Y----------VNSLEDNIERERDS-ESSLMAASLTQENFRKMLARMVILDELPFKFVET 177
           +          +   +D ++ +R    SSL A S   +  R+ LARM+I+DELPF  VE 
Sbjct: 329 FPKEALDPTQKILCFQDVVKDDRKGIGSSLSAVSFDVDRCRQALARMIIVDELPFSHVEG 388

Query: 178 EGFHQFCRALNPKFVIPSRVTVAKDCFQIVL 197
           EGF  +   L PKF IP R+TVA+DC+++ L
Sbjct: 389 EGFRYYTSCLQPKFPIPGRLTVARDCWKLYL 419

[Close]
BLAST of MELO3C034543.2.1 vs. NCBI nr
Match: XP_025700387.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Arachis hypogaea])

HSP 1 Score: 135.6 bits (340), Expect = 6.6e-28
Identity = 69/151 (45.70%), Postives = 94/151 (62.25%), Query Frame = 0 

Query: 58  GKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRH-LEKCKM 117
           GKRKP +P S  W+HF K E  +P+YPRA C  CG SYACD+ +NGT N+K H L +CK 
Sbjct: 80  GKRKPCRPRSWTWDHFTKDETSNPQYPRAKCNWCGASYACDTHKNGTSNMKNHLLSQCKK 139

Query: 118 Y----------VNSLEDNIERERDS-ESSLMAASLTQENFRKMLARMVILDELPFKFVET 177
           +          +   +D ++ +R    SSL A S   +  R+ LARM+I+DELPF  +E 
Sbjct: 140 FPKEALDPTQKILCFQDVVKDDRKGIGSSLSAVSFDVDRCRQALARMIIVDELPFSHLEG 199

Query: 178 EGFHQFCRALNPKFVIPSRVTVAKDCFQIVL 197
           EGF  +   L PKF IP R+TVA+DC+++ L
Sbjct: 200 EGFRYYTSCLQPKFPIPGRLTVARDCWKLYL 230

[Close]
BLAST of MELO3C034543.2.1 vs. NCBI nr
Match: XP_025637334.1 (zinc finger BED domain-containing protein RICESLEEPER 1-like [Arachis hypogaea])

HSP 1 Score: 135.2 bits (339), Expect = 8.7e-28
Identity = 66/144 (45.83%), Postives = 88/144 (61.11%), Query Frame = 0 

Query: 60  RKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRH-LEKCKMYV 119
           RKP +P S  WEHF K     P YPRA C  CG SYACDS RNGT N++ H L +CK + 
Sbjct: 302 RKPSRPRSWTWEHFTKDPKSKPSYPRAKCNWCGASYACDSHRNGTTNMRYHLLNQCKKFP 361

Query: 120 NSLED------NIERERDSESSLMAASLTQENFRKMLARMVILDELPFKFVETEGFHQFC 179
               D        +++++ E    A +   E  RK+LARM+I+DELPFKFVE EGF  + 
Sbjct: 362 RDSGDPSQTILTFQQKKEGEGVFTAVTFDAEMCRKVLARMIIVDELPFKFVEGEGFRFYM 421

Query: 180 RALNPKFVIPSRVTVAKDCFQIVL 197
             + P+F +P R+TVAKDC+ + +
Sbjct: 422 SIVQPRFPLPGRITVAKDCWNLYI 445

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BLAST of MELO3C034543.2.1 vs. TrEMBL
Match: tr|D0UIX2|D0UIX2_CUCME (Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 4.6e-78
Identity = 144/159 (90.57%), Postives = 149/159 (93.71%), Query Frame = 0 

Query: 39  MTSFSVDETSNQSCSSPVLGKRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACD 98
           MTSFSVDETSNQSCSSPVLGKRKPVKPPS VWEHFIKVEGCDPKYPRAACKHCG SYACD
Sbjct: 1   MTSFSVDETSNQSCSSPVLGKRKPVKPPSSVWEHFIKVEGCDPKYPRAACKHCGASYACD 60

Query: 99  SKRNGTMNLKRHLEKCKMYVNSLEDNIERERDSESSLMAASLTQENFRKMLARMVILDEL 158
           SKRNGT NLKRHLEKCKMYVN LEDN+E E DSES+LM AS TQEN RKMLARMVILDEL
Sbjct: 61  SKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESNLMTASFTQENCRKMLARMVILDEL 120

Query: 159 PFKFVETEGFHQFCRALNPKFVIPSRVTVAKDCFQIVLK 198
           PFKFVE+EGFHQFCRALNPKFVIPSRVTVAKDCFQ+ +K
Sbjct: 121 PFKFVESEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMK 159

[Close]
BLAST of MELO3C034543.2.1 vs. TrEMBL
Match: tr|A5BUV6|A5BUV6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_044291 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.0e-32
Identity = 76/150 (50.67%), Postives = 94/150 (62.67%), Query Frame = 0 

Query: 59  KRKPVKPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEK-CKMY 118
           KRKP KPPS VW+HF KV+ CDP YPRA C +CG  YAC  KRN T N+K HL   C+ +
Sbjct: 28  KRKPTKPPSEVWDHFTKVKECDPNYPRATCNYCGIDYACHDKRNETSNMKAHLASGCQKH 87

Query: 119 VNSLEDNIERERDSES-------------SLMAASLTQENFRKMLARMVILDELPFKFVE 178
               +D  ++    +S             +L+A S   E+ RKMLARM+I+DEL F+FV+
Sbjct: 88  PFRCKDPKQKTLSFQSKXXXXXXXXXSGYTLLATSFNVEHCRKMLARMIIVDELAFRFVQ 147

Query: 179 TEGFHQFCRALNPKFVIPSRVTVAKDCFQI 195
            EGF  FC  L PKF IPSR TVAKDC Q+
Sbjct: 148 GEGFRAFCSPLQPKFFIPSRATVAKDCSQL 177

[Close]
BLAST of MELO3C034543.2.1 vs. TrEMBL
Match: tr|M5VNM2|M5VNM2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G075500 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-23
Identity = 80/215 (37.21%), Postives = 111/215 (51.63%), Query Frame = 0 

Query: 4   PDSLSPGTHTQGDDSGPQCNIHATSRGCDAAQRIMMTSFSVDETSNQSCSSPVLGKRKPV 63
           P S S G  T G+ S P+ +  +TS G D                           RKP 
Sbjct: 7   PTSTSKGNPT-GNRSQPRTDAPSTSNGLDT--------------------------RKPA 66

Query: 64  KPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHL-EKCKMYVNSLE 123
           +PPS+VWE+FIK++  DPK P+A CK+C   YA  SK+NGT NL  HL  +CK Y     
Sbjct: 67  RPPSIVWENFIKMQD-DPKNPKAKCKYCNKVYAYGSKKNGTSNLLSHLANQCKEYPGR-- 126

Query: 124 DNIERER---------DSESSLMAASLTQENFRKMLARMVILDELPFKFVETEGFHQFCR 183
            +I++++         + E  L+A S + E+ R+ + R +ILDE PFK VE EGF    R
Sbjct: 127 -DIKKQKTLSFQPKKGEEEGKLIATSYSPESCREAIVRFIILDEQPFKVVEGEGFRDMLR 186

Query: 184 ALNPKFVIPSRVTVAKDCFQIV----LKLSDGSTL 205
              P+  +PS VT+AKD  +I     +KL D  T+
Sbjct: 187 VFEPRLQVPSCVTIAKDVLKIYKKEKIKLKDYLTI 190

[Close]
BLAST of MELO3C034543.2.1 vs. TrEMBL
Match: tr|A0A2P4IKB1|A0A2P4IKB1_QUESU (Zinc finger bed domain-containing protein ricesleeper 1 OS=Quercus suber OX=58331 GN=CFP56_63153 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.5e-23
Identity = 57/144 (39.58%), Postives = 85/144 (59.03%), Query Frame = 0 

Query: 64  KPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEK-CKMY----- 123
           K PS +W+HF ++EGCDP YP++ C +C   Y C  KRNGT  +  H++  CK Y     
Sbjct: 54  KEPSKIWDHFSRIEGCDPLYPKSHCNYCKKCYNCHPKRNGTSAMWSHIKSGCKKYPYRRD 113

Query: 124 ----VNSLEDNIERERDSESSLMAASLTQENFRKMLARMVILDELPFKFVETEGFHQFCR 183
                 + +   + E +  + L+    + E  R  LARM+I+DELPF+FVE  GF  F  
Sbjct: 114 KGQTTLTYQSKKKGEGEGGNELVLRKFSVERLRMALARMIIVDELPFRFVEHSGFIDFMS 173

Query: 184 ALNPKFVIPSRVTVAKDCFQIVLK 198
            + P+F +PSRVTVA+DC ++ ++
Sbjct: 174 EVEPRFEVPSRVTVARDCLRLYIR 197

[Close]
BLAST of MELO3C034543.2.1 vs. TrEMBL
Match: tr|A0A2P4IRD6|A0A2P4IRD6_QUESU (Zinc finger bed domain-containing protein ricesleeper 1 OS=Quercus suber OX=58331 GN=CFP56_53819 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.5e-23
Identity = 57/144 (39.58%), Postives = 85/144 (59.03%), Query Frame = 0 

Query: 64  KPPSLVWEHFIKVEGCDPKYPRAACKHCGTSYACDSKRNGTMNLKRHLEK-CKMY----- 123
           K PS +W+HF ++EGCDP YP++ C +C   Y C  KRNGT  +  H++  CK Y     
Sbjct: 54  KEPSKIWDHFSRIEGCDPLYPKSHCNYCKKCYNCHPKRNGTSAMWSHIKSGCKKYPYRRD 113

Query: 124 ----VNSLEDNIERERDSESSLMAASLTQENFRKMLARMVILDELPFKFVETEGFHQFCR 183
                 + +   + E +  + L+    + E  R  LARM+I+DELPF+FVE  GF  F  
Sbjct: 114 KGQTTLTYQSKKKGEGEGGNELVLRKFSVERLRMALARMIIVDELPFRFVEHSGFIDFMS 173

Query: 184 ALNPKFVIPSRVTVAKDCFQIVLK 198
            + P+F +PSRVTVA+DC ++ ++
Sbjct: 174 EVEPRFEVPSRVTVARDCLRLYIR 197

The following BLAST results are available for this feature:
BLAST of MELO3C034543.2.1 vs. NCBI nr
Match NameE-valueIdentityDescription
ACX85638.17.0e-7890.57putative transposase [Cucumis melo][more]
CAN61798.11.5e-3250.67hypothetical protein VITISV_044291 [Vitis vinifera][more]
XP_025679003.11.0e-2846.36zinc finger BED domain-containing protein RICESLEEPER 2-like [Arachis hypogaea][more]
XP_025700387.16.6e-2845.70zinc finger BED domain-containing protein RICESLEEPER 2-like [Arachis hypogaea][more]
XP_025637334.18.7e-2845.83zinc finger BED domain-containing protein RICESLEEPER 1-like [Arachis hypogaea][more]
BLAST of MELO3C034543.2.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C034543.2.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C034543.2.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|D0UIX2|D0UIX2_CUCME4.6e-7890.57Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1[more]
tr|A5BUV6|A5BUV6_VITVI1.0e-3250.67Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_044291 PE=4 SV=1[more]
tr|M5VNM2|M5VNM2_PRUPE1.1e-2337.21Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G075500 PE=4 SV=1[more]
tr|A0A2P4IKB1|A0A2P4IKB1_QUESU1.5e-2339.58Zinc finger bed domain-containing protein ricesleeper 1 OS=Quercus suber OX=5833... [more]
tr|A0A2P4IRD6|A0A2P4IRD6_QUESU1.5e-2339.58Zinc finger bed domain-containing protein ricesleeper 1 OS=Quercus suber OX=5833... [more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR037220BED_dom
IPR003656Znf_BED
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003676 nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C034543.2MELO3C034543.2gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C034543.2.1MELO3C034543.2.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C034543.2.1.CDS.1MELO3C034543.2.1.CDS.1CDS
MELO3C034543.2.1.CDS.2MELO3C034543.2.1.CDS.2CDS
MELO3C034543.2.1.CDS.3MELO3C034543.2.1.CDS.3CDS
MELO3C034543.2.1.CDS.4MELO3C034543.2.1.CDS.4CDS
MELO3C034543.2.1.CDS.5MELO3C034543.2.1.CDS.5CDS
MELO3C034543.2.1.CDS.6MELO3C034543.2.1.CDS.6CDS
MELO3C034543.2.1.CDS.7MELO3C034543.2.1.CDS.7CDS
MELO3C034543.2.1.CDS.8MELO3C034543.2.1.CDS.8CDS
MELO3C034543.2.1.CDS.9MELO3C034543.2.1.CDS.9CDS
MELO3C034543.2.1.CDS.10MELO3C034543.2.1.CDS.10CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C034543.2.1.exon.1MELO3C034543.2.1.exon.1exon
MELO3C034543.2.1.exon.2MELO3C034543.2.1.exon.2exon
MELO3C034543.2.1.exon.3MELO3C034543.2.1.exon.3exon
MELO3C034543.2.1.exon.4MELO3C034543.2.1.exon.4exon
MELO3C034543.2.1.exon.5MELO3C034543.2.1.exon.5exon
MELO3C034543.2.1.exon.6MELO3C034543.2.1.exon.6exon
MELO3C034543.2.1.exon.7MELO3C034543.2.1.exon.7exon
MELO3C034543.2.1.exon.8MELO3C034543.2.1.exon.8exon
MELO3C034543.2.1.exon.9MELO3C034543.2.1.exon.9exon
MELO3C034543.2.1.exon.10MELO3C034543.2.1.exon.10exon


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003656Zinc finger, BED-typeSMARTSM00614bed5coord: 64..117
e-value: 3.2E-12
score: 56.6
IPR003656Zinc finger, BED-typePFAMPF02892zf-BEDcoord: 67..113
e-value: 1.5E-6
score: 28.0
IPR003656Zinc finger, BED-typePROSITEPS50808ZF_BEDcoord: 64..121
score: 10.544
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..241
NoneNo IPR availablePANTHERPTHR23272BED FINGER-RELATEDcoord: 62..195
NoneNo IPR availablePANTHERPTHR23272:SF54SUBFAMILY NOT NAMEDcoord: 62..195
IPR037220Zinc finger BED domainSUPERFAMILYSSF140996Hermes dimerisation domaincoord: 140..191
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 67..115