MELO3C034114.2.1 (mRNA) Melon (DHL92) v3.6.1

Overview
NameMELO3C034114.2.1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptiongirdin-like
Locationchr10 : 8813721 .. 8814132 (+)
Sequence length412
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGACAGTTTGGGATCTAACATATCCAAGTTATGAGGCTTGGGTGTATTTCTTTGCAAAAATGACTTATGAAAATGTCATATGGAAGGCTCAATGGAAGCCTTTGAAGGCGGTGATATACAAATGTGGAAATTTTCATAGTGTCCCTTTGTTGGGACCATGAGGAGGTGTTAACTATACACCATTGTTAATTTTGTGTCAGGTGTGGCTCAAACAATTTATACCACCAACTCATAATCTATAATAGTCTGACTTTTGATATGATCTTGAAGATTTTCAAGGAAAAAAAACGTCGAGTAGTATGCACATGGAAATCTATGAGGAAGATAAAAGACAAAGGACACTACAAAGGAGTTATGAGTGGGTACGAGGCATGACAGGAAAATAGAATGAAGAATATAATAGTTAGCTTA

mRNA sequence

ACGACAGTTTGGGATCTAACATATCCAAGTTATGAGGCTTGGGTGTATTTCTTTGCAAAAATGACTTATGAAAATGTCATATGGAAGGCTCAATGGAAGCCTTTGAAGGCGGTGATATACAAATGTGGAAATTTTCATAGTGTCCCTTTGTTGGGACCATGAGGAGGTGTTAACTATACACCATTGTTAATTTTGTGTCAGGTGTGGCTCAAACAATTTATACCACCAACTCATAATCTATAATAGTCTGACTTTTGATATGATCTTGAAGATTTTCAAGGAAAAAAAACGTCGAGTAGTATGCACATGGAAATCTATGAGGAAGATAAAAGACAAAGGACACTACAAAGGAGTTATGAGTGGGTACGAGGCATGACAGGAAAATAGAATGAAGAATATAATAGTTAGCTTA

Coding sequence (CDS)

ATGATCTTGAAGATTTTCAAGGAAAAAAAACGTCGAGTAGTATGCACATGGAAATCTATGAGGAAGATAAAAGACAAAGGACACTACAAAGGAGTTATGAGTGGGTACGAGGCATGA

Protein sequence

MILKIFKEKKRRVVCTWKSMRKIKDKGHYKGVMSGYEA
Homology
[Close]
BLAST of MELO3C034114.2.1 vs. NCBI nr
Match: XP_016900531.1 (PREDICTED: girdin-like [Cucumis melo])

HSP 1 Score: 55.8 bits (133), Expect = 3.6e-05
Identity = 24/30 (80.00%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 9  KKRRVVCTWKSMRKIKDKGHYKGVMSGYEA 39
          KKR+ VC WKS+RKIKDKGHY+GV SGYEA
Sbjct: 63 KKRQAVCAWKSIRKIKDKGHYEGVTSGYEA 92

[Close]
BLAST of MELO3C034114.2.1 vs. TrEMBL
Match: tr|A0A1S4DX26|A0A1S4DX26_CUCME (girdin-like OS=Cucumis melo OX=3656 GN=LOC107990936 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.4e-05
Identity = 24/30 (80.00%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 9  KKRRVVCTWKSMRKIKDKGHYKGVMSGYEA 39
          KKR+ VC WKS+RKIKDKGHY+GV SGYEA
Sbjct: 63 KKRQAVCAWKSIRKIKDKGHYEGVTSGYEA 92

The following BLAST results are available for this feature:
BLAST of MELO3C034114.2.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016900531.13.6e-0580.00PREDICTED: girdin-like [Cucumis melo][more]
BLAST of MELO3C034114.2.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C034114.2.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C034114.2.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DX26|A0A1S4DX26_CUCME2.4e-0580.00girdin-like OS=Cucumis melo OX=3656 GN=LOC107990936 PE=4 SV=1[more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C034114.2MELO3C034114.2gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C034114.2.1.exon.1MELO3C034114.2.1.exon.1exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C034114.2.1.five_prime_UTR.1MELO3C034114.2.1.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C034114.2.1.CDS.1MELO3C034114.2.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C034114.2.1.three_prime_UTR.1MELO3C034114.2.1.three_prime_UTR.1three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C034114.2.1MELO3C034114.2.1-proteinpolypeptide