MELO3C033320.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTTAATAAAACAATAGTTTCATAATTTGCATATCTTAAGAATATGGCTTCTTCCCGTATCATCTGCTTTGCTCTTATATTTGCAGGTTCCTTTCCTTTAATTTCTTCTACAAATACAATATTATCATGTGTTACAAAATCAAAAAATCATGAGACATATTAGATTGCTAATTTGTATAGTTATGTTTTTATGTTTTTGTATAGTTGCATTGATCTTAGTGCCTCAAGATGTCTCAGCTGCCAAAAGATGTCAAGACGTTTTGTATAACACTGGGTGCTCTCTCAATGATTGTGGGAAGAAATGTTGGGAGAAGCATCATACTATTTCACATCAATGCATTCCAACTAATCCTTCTCAAACCATATATGCGTGTTATTGTTTCTTTGATTGTGGTGATCAAAAGAATTGATTTGCATGCTGACATCTCCTAATTTAATGTAATGTACTTTGTCACTTAAACTTACAAATAATATCACACATCTTCC ACTTAATAAAACAATAGTTTCATAATTTGCATATCTTAAGAATATGGCTTCTTCCCGTATCATCTGCTTTGCTCTTATATTTGCAGTTGCATTGATCTTAGTGCCTCAAGATGTCTCAGCTGCCAAAAGATGTCAAGACGTTTTGTATAACACTGGGTGCTCTCTCAATGATTGTGGGAAGAAATGTTGGGAGAAGCATCATACTATTTCACATCAATGCATTCCAACTAATCCTTCTCAAACCATATATGCGTGTTATTGTTTCTTTGATTGTGGTGATCAAAAGAATTGATTTGCATGCTGACATCTCCTAATTTAATGTAATGTACTTTGTCACTTAAACTTACAAATAATATCACACATCTTCC ATGGCTTCTTCCCGTATCATCTGCTTTGCTCTTATATTTGCAGTTGCATTGATCTTAGTGCCTCAAGATGTCTCAGCTGCCAAAAGATGTCAAGACGTTTTGTATAACACTGGGTGCTCTCTCAATGATTGTGGGAAGAAATGTTGGGAGAAGCATCATACTATTTCACATCAATGCATTCCAACTAATCCTTCTCAAACCATATATGCGTGTTATTGTTTCTTTGATTGTGGTGATCAAAAGAATTGA MASSRIICFALIFAVALILVPQDVSAAKRCQDVLYNTGCSLNDCGKKCWEKHHTISHQCIPTNPSQTIYACYCFFDCGDQKN
BLAST of MELO3C033320.2.1 vs. NCBI nr
Match: KGN54897.1 (hypothetical protein Csa_4G576870 [Cucumis sativus]) HSP 1 Score: 166.8 bits (421), Expect = 3.1e-38 Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of MELO3C033320.2.1 vs. NCBI nr
Match: KGN64987.1 (hypothetical protein Csa_1G172580 [Cucumis sativus]) HSP 1 Score: 115.2 bits (287), Expect = 1.1e-22 Identity = 51/76 (67.11%), Postives = 60/76 (78.95%), Query Frame = 0
BLAST of MELO3C033320.2.1 vs. NCBI nr
Match: KGN54810.1 (hypothetical protein Csa_4G507400 [Cucumis sativus]) HSP 1 Score: 82.8 bits (203), Expect = 5.9e-13 Identity = 39/77 (50.65%), Postives = 55/77 (71.43%), Query Frame = 0
BLAST of MELO3C033320.2.1 vs. NCBI nr
Match: OMO95288.1 (S locus-related glycoprotein 1 binding pollen coat [Corchorus olitorius]) HSP 1 Score: 75.1 bits (183), Expect = 1.2e-10 Identity = 31/58 (53.45%), Postives = 39/58 (67.24%), Query Frame = 0
BLAST of MELO3C033320.2.1 vs. NCBI nr
Match: XP_018498384.1 (PREDICTED: putative defensin-like protein 165 [Pyrus x bretschneideri]) HSP 1 Score: 73.2 bits (178), Expect = 4.7e-10 Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = 0
BLAST of MELO3C033320.2.1 vs. TrEMBL
Match: tr|A0A0A0L2R3|A0A0A0L2R3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G576870 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 2.1e-38 Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of MELO3C033320.2.1 vs. TrEMBL
Match: tr|A0A0A0LVZ5|A0A0A0LVZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172580 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 7.2e-23 Identity = 51/76 (67.11%), Postives = 60/76 (78.95%), Query Frame = 0
BLAST of MELO3C033320.2.1 vs. TrEMBL
Match: tr|A0A0A0KYP7|A0A0A0KYP7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507400 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 3.9e-13 Identity = 39/77 (50.65%), Postives = 55/77 (71.43%), Query Frame = 0
BLAST of MELO3C033320.2.1 vs. TrEMBL
Match: tr|A0A1R3JKF5|A0A1R3JKF5_9ROSI (S locus-related glycoprotein 1 binding pollen coat OS=Corchorus olitorius OX=93759 GN=COLO4_16008 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 8.2e-11 Identity = 31/58 (53.45%), Postives = 39/58 (67.24%), Query Frame = 0
BLAST of MELO3C033320.2.1 vs. TrEMBL
Match: tr|A0A1R3G6W7|A0A1R3G6W7_COCAP (S locus-related glycoprotein 1 binding pollen coat OS=Corchorus capsularis OX=210143 GN=CCACVL1_28320 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 5.3e-10 Identity = 28/50 (56.00%), Postives = 37/50 (74.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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