MELO3C033271.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCTCGTCCTATGGAGTGAGAAAATTTCTATCTCTCGAATGTCTTACAGTTCTATTACATATAGTATATTTTGTAATTCTTTTGTAATTCGATTGTGCAGGAAAACTCAAGAAGATACCTCAATAAGATAACTCTTGTCTGCTTCTATTTGCCCCTATCTATGCACATTAAGAAAGTGAATTGCATTATTTTCTTAGTTATTGTAGGTTGGTTGGAGGGTTTGTATTACAATTGAAGTGCTTTGATTATATATGATGATTATATATTCATTACTACCTAATTGGGTTGTAAGTCCCTTGTGATGTTTTTAAACCATAATGTTTTTTTAGTTCCTATTCTTGATTTCCCTTCCATGGCCCTCTAATGGCATCGTTCTACAATCGGCAGAATGGGAAGGTTCTTAGGCTTTTCTCTTCTCCAATCAATAAGAGGTAATTTTGTTCTTGATATCCATGTTCGCTTTGTGTTATGAGGGAAAGGATTGTTTGTTCTAATTTCTTCAAATGTTTGCTTAATTTGAATATGCGAGTGAGAGATATGAATTTGGTTCTGTTTGGTCCGTTTCTGTGCTGCAGAGTCGATAGAATTAGGGACAATCAGGAAGAGAAGTTTGTAGTTCTAGGAGTTTATGAGGTTGTAGATATCCTAAAATCAGATTATGAGAATGCCTACTTTGTTACTGGTACCATCATTTTCAACATTTTCCTTAGCTGATTCGTTGTTTTCTTTTATCATACTTTGATTTATGAGTTCTTCCTTTGGCTGCAAATTATTGTCATTCTTTCATTTCTCTTGTACATTCTTTTGTTGAAAGCTCGATTTTTCTATCCTTGTACATTCTTTCATTTCTCTTGTTAAAACCTTGGTTCCAGACCAAACCAAATATATAGATGTATGCATGTATTAATGGGTGCCTGTGTAACTAGCGGCATTAAATAAAAAATGAAGCTTTTTGGAAGTGTATTTTGTGATGGGCTTATACTGAAAAGAGGGATATTCACTTATGCAATTTATACTGATGATTGTCTTTTTTAAGATCCAACCATCAGATTTAAAGGTATTAATAATCACAGAAACTTCTAATAACTTAATCTTATCATAGCAATGGTGATCCTATTTTCACCTTTTATGTTTTCAAATGCCCAAGATTACATCAACTCAAAATTAGAAGGCATAAATTGATTTTTATCGATGAATCACTTTAAACAGCAGAACTGAATTGAATATTAGATTGAAAAACTCTTTTGATCACTTTCATAGAAGTAATTATTTATCCTCTAAACTTTAAAACATGACAACTTAATCTTTGTACTTTCAAACTTGTAGCAACTTTTACTATGGTCTTTAGCATGTAATTATTTTTTCCTTGTATTTTCAAATTTAATTTCATCCATATTGTGAAAAATCTCATGAAAATGAATGTCAAATTTTATTATGAAATGAATTAGTTTTGTAGTTTCATGTTACTTTGGAACACATACTTCATTTTAGCAATATTTTCAAACATTAAAGTTGCTTTATGGACTTTTAACCCTGTAGGCAAGGAGTTGTATTCACGGAACTTAAAGTTACTTATTCCTTTTTTTACCATCCATCGATCCAATTACAAACAATTACAGCTGAGCCCTGGTGGGGTCCTCCAAAGACCCATCGAACGTCGTGGGGTTATACTTCCGAAAATCCCTCAGGTGCTTGGCCTCTGCCGACAACTGATCCGGCACGACCTGGGGCACAACTGGAACTGGAGCTGGAGCAGGAGCTGGCGGGGCAGGCTGCTGCTGCTGCTGCTCCCGCATCTGCATAA TCTCGTCCTATGGAGTGAGAAAATTTCTATCTCTCGAATGTCTTACAGTTCTATTACATATAGTATATTTTGTAATTCTTTTGTAATTCGATTGTGCAGGAAAACTCAAGAAGATACCTCAATAAGATAACTCTTGTCTGCTTCTATTTGCCCCTATCTATGCACATTAAGAAAGTGAATTGCATTATTTTCTTAGTTATTGTAGGTTGGTTGGAGGGTTTGTATTACAATTGAAGTGCTTTGATTATATATGATGATTATATATTCATTACTACCTAATTGGGTTGTAAGTCCCTTGTGATGTTTTTAAACCATAATGTTTTTTTAGTTCCTATTCTTGATTTCCCTTCCATGGCCCTCTAATGGCATCGTTCTACAATCGGCAGAATGGGAAGGTTCTTAGGCTTTTCTCTTCTCCAATCAATAAGAGAGTCGATAGAATTAGGGACAATCAGGAAGAGAAGTTTGTAGTTCTAGGAGTTTATGAGGTTGTAGATATCCTAAAATCAGATTATGAGAATGCCTACTTTGTTACTGCAACTTTTACTATGGTCTTTAGCATGCAAGGAGTTGTATTCACGGAACTTAAAGTTACTTATTCCTTTTTTTACCATCCATCGATCCAATTACAAACAATTACAGCTGAGCCCTGGTGGGGTCCTCCAAAGACCCATCGAACGTCGTGGGGTTATACTTCCGAAAATCCCTCAGGTGCTTGGCCTCTGCCGACAACTGATCCGGCACGACCTGGGGCACAACTGGAACTGGAGCTGGAGCAGGAGCTGGCGGGGCAGGCTGCTGCTGCTGCTGCTCCCGCATCTGCATAA ATGGCATCGTTCTACAATCGGCAGAATGGGAAGGTTCTTAGGCTTTTCTCTTCTCCAATCAATAAGAGAGTCGATAGAATTAGGGACAATCAGGAAGAGAAGTTTGTAGTTCTAGGAGTTTATGAGGTTGTAGATATCCTAAAATCAGATTATGAGAATGCCTACTTTGTTACTGCAACTTTTACTATGGTCTTTAGCATGCAAGGAGTTGTATTCACGGAACTTAAAGTTACTTATTCCTTTTTTTACCATCCATCGATCCAATTACAAACAATTACAGCTGAGCCCTGGTGGGGTCCTCCAAAGACCCATCGAACGTCGTGGGGTTATACTTCCGAAAATCCCTCAGGTGCTTGGCCTCTGCCGACAACTGATCCGGCACGACCTGGGGCACAACTGGAACTGGAGCTGGAGCAGGAGCTGGCGGGGCAGGCTGCTGCTGCTGCTGCTCCCGCATCTGCATAA MASFYNRQNGKVLRLFSSPINKRVDRIRDNQEEKFVVLGVYEVVDILKSDYENAYFVTATFTMVFSMQGVVFTELKVTYSFFYHPSIQLQTITAEPWWGPPKTHRTSWGYTSENPSGAWPLPTTDPARPGAQLELELEQELAGQAAAAAAPASA
BLAST of MELO3C033271.2.1 vs. NCBI nr
Match: XP_008455790.1 (PREDICTED: uncharacterized protein LOC103495870 [Cucumis melo] >XP_008455796.1 PREDICTED: uncharacterized protein LOC103495870 [Cucumis melo]) HSP 1 Score: 94.4 bits (233), Expect = 3.7e-16 Identity = 56/96 (58.33%), Postives = 64/96 (66.67%), Query Frame = 0
BLAST of MELO3C033271.2.1 vs. NCBI nr
Match: XP_004139222.1 (PREDICTED: uncharacterized protein LOC101220191 [Cucumis sativus] >XP_011648767.1 PREDICTED: uncharacterized protein LOC101220191 [Cucumis sativus] >KGN60827.1 hypothetical protein Csa_2G011600 [Cucumis sativus]) HSP 1 Score: 90.1 bits (222), Expect = 7.0e-15 Identity = 54/96 (56.25%), Postives = 62/96 (64.58%), Query Frame = 0
BLAST of MELO3C033271.2.1 vs. NCBI nr
Match: XP_022946926.1 (uncharacterized protein LOC111450860 [Cucurbita moschata]) HSP 1 Score: 83.6 bits (205), Expect = 6.5e-13 Identity = 49/96 (51.04%), Postives = 61/96 (63.54%), Query Frame = 0
BLAST of MELO3C033271.2.1 vs. NCBI nr
Match: XP_023545588.1 (uncharacterized protein LOC111804973 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 83.6 bits (205), Expect = 6.5e-13 Identity = 49/96 (51.04%), Postives = 61/96 (63.54%), Query Frame = 0
BLAST of MELO3C033271.2.1 vs. NCBI nr
Match: XP_022999247.1 (uncharacterized protein LOC111493675 [Cucurbita maxima]) HSP 1 Score: 81.6 bits (200), Expect = 2.5e-12 Identity = 48/96 (50.00%), Postives = 61/96 (63.54%), Query Frame = 0
BLAST of MELO3C033271.2.1 vs. TrEMBL
Match: tr|A0A1S3C2Z9|A0A1S3C2Z9_CUCME (uncharacterized protein LOC103495870 OS=Cucumis melo OX=3656 GN=LOC103495870 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.5e-16 Identity = 56/96 (58.33%), Postives = 64/96 (66.67%), Query Frame = 0
BLAST of MELO3C033271.2.1 vs. TrEMBL
Match: tr|A0A0A0LJD8|A0A0A0LJD8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G011600 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 4.6e-15 Identity = 54/96 (56.25%), Postives = 62/96 (64.58%), Query Frame = 0
BLAST of MELO3C033271.2.1 vs. TrEMBL
Match: tr|A0A2I4GPM0|A0A2I4GPM0_9ROSI (uncharacterized protein LOC109009706 isoform X2 OS=Juglans regia OX=51240 GN=LOC109009706 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 9.3e-08 Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 0
BLAST of MELO3C033271.2.1 vs. TrEMBL
Match: tr|A0A2I4GPM2|A0A2I4GPM2_9ROSI (uncharacterized protein LOC109009706 isoform X3 OS=Juglans regia OX=51240 GN=LOC109009706 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 9.3e-08 Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 0
BLAST of MELO3C033271.2.1 vs. TrEMBL
Match: tr|A0A2I4GPM1|A0A2I4GPM1_9ROSI (uncharacterized protein LOC109009706 isoform X1 OS=Juglans regia OX=51240 GN=LOC109009706 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 9.3e-08 Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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