MELO3C032569.2.1 (mRNA) Melon (DHL92) v3.6.1

Overview
NameMELO3C032569.2.1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionCell division protein ftsH
Locationchr07 : 7377329 .. 7378815 (+)
Sequence length666
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATGGAAAGAGCACAACGAGCAAAGGCGGAAACCATTCTACTCTCCTTCATGTGCAAAGATATACTGTCAAACGATCTTTAGGGTTTTTAGAAGCTTGTTCTTCGCAGACATTGAACGTTATGGCAAGTCGGTACCATCACTGTGTTTAGAAGCATTCTTCACTTCTGATGAGTTTTTTTTTTTTCTTATCTGAAATTAGAAGGGATATATGGAACTCTCTTCCGTGCGCAGAGATACATCGTCAACAACTCATTAGGGTTCAAAAAAACTCATTCTTTCACAGACATTAAACGTTCGGCCAAGTCGGTTTCATCACTGTTCAGAAGCATTCTTCCATTACAGTGATTATTATTTTTTTTTCTGTTCTTATCTGAAATAAAAGGGGGTATATATGGGATCAAAAACAAAATTATTTAACAGTCTTCCATCACTGTGTTTAGAATGTCGAAGATATTAAGGTTTAGGTGCAGTTTGAAGTAATGCATGTTGAATATATTTCCTGATTAAACCTCAAGTTTGAAGTATGTATATATTGAAGTGTTATTTAGTGTTTAAACAACCAATTTTAAGTGTTAATTTAGTGTTTAAACAACCACAAATTAAGTAATGTATGTTGTACATATTTTCTTATTATGTTTATATTCTTAAAAATCAAATGAAACAGAAAACACAAAGTGATTGGGTAGGATAAGGTTGTATTGTATCATAAAATCTATATTTATATTGTATCATAATATGTAGGATAAGGTTGAAAAAAAAATGGTTTGTAGAAGCAAAAGATGCCTAGGGTCGAGACTGAAAAATATTAAATCAAACAAGGATGATTCTATTGTGATCGACGATAATATAAAGGTATATTTCTTATTTACTGAATTTAAAATTTAAATTGTACAGATAGTTAAACACAAATATAATATGTGTATTTATGGTAGGAGGAAGTAAGAAATGAAGAACCAAAGGAATATCAATCACTACAAATTATATATCCAGAAGATGATGATGAAGACTTAAGAGAACCGATAGGTACACAGATTGTGGTGTACCAAAATCAAAAGTTTGTGAAAACGGATGTGGTGTTTGAAACTCCAAAAGCAAAAATGCCAAAAAAAAACCAAAGGAAAACAATCGAAAATAGTGAGTATATGTTTTATTCACTGATGTATATATTTAATATGCTTTCTACTGATGAGCTTATTATATTTGTTTGTAGATTAATGAAGGAGAAACATCGTGTGATGTACGACTAAACTTCTCATCGGACTCTGATGAGGTTTATTTATGATCTGTACAAATTGAAAAATGTTTTATTATATTCAGTTTTTTGTATGAATAGAAACTAACGTTAATGATATTCGATTATTTGCAGGACAATGTACCAATAGCCAAAAGGAGATTCTTTATAGCACATATGTTCATTAACTATAATCTCGGACACACTAAAACTAACATAATTGTGCAATTCATTGAAAAACCATCGAAGTAG

mRNA sequence

ATGTATGGAAAGAGCACAACGAGCAAAGGCGGAAACCATTCTACTCTCCTTCATGTGCAAAGATATACTGTCAAACGATCTTTAGGGTTTTTAGAAGCTTGTTCTTCGCAGACATTGAACGTTATGGCAAAAGGGATATATGGAACTCTCTTCCGTGCGCAGAGATACATCGTCAACAACTCATTAGGGTTCAAAAAAACTCATTCTTTCACAGACATTAAACGTTCGGCCAAGTCGGATAAGGTTGAAAAAAAAATGGTTTGTAGAAGCAAAAGATGCCTAGGGTCGAGACTGAAAAATATTAAATCAAACAAGGATGATTCTATTGTGATCGACGATAATATAAAGGAGGAAGTAAGAAATGAAGAACCAAAGGAATATCAATCACTACAAATTATATATCCAGAAGATGATGATGAAGACTTAAGAGAACCGATAGGTACACAGATTGTGGTGTACCAAAATCAAAAGTTTGTGAAAACGGATGTGATTAATGAAGGAGAAACATCGTGTGATGTACGACTAAACTTCTCATCGGACTCTGATGAGGACAATGTACCAATAGCCAAAAGGAGATTCTTTATAGCACATATGTTCATTAACTATAATCTCGGACACACTAAAACTAACATAATTGTGCAATTCATTGAAAAACCATCGAAGTAG

Coding sequence (CDS)

ATGTATGGAAAGAGCACAACGAGCAAAGGCGGAAACCATTCTACTCTCCTTCATGTGCAAAGATATACTGTCAAACGATCTTTAGGGTTTTTAGAAGCTTGTTCTTCGCAGACATTGAACGTTATGGCAAAAGGGATATATGGAACTCTCTTCCGTGCGCAGAGATACATCGTCAACAACTCATTAGGGTTCAAAAAAACTCATTCTTTCACAGACATTAAACGTTCGGCCAAGTCGGATAAGGTTGAAAAAAAAATGGTTTGTAGAAGCAAAAGATGCCTAGGGTCGAGACTGAAAAATATTAAATCAAACAAGGATGATTCTATTGTGATCGACGATAATATAAAGGAGGAAGTAAGAAATGAAGAACCAAAGGAATATCAATCACTACAAATTATATATCCAGAAGATGATGATGAAGACTTAAGAGAACCGATAGGTACACAGATTGTGGTGTACCAAAATCAAAAGTTTGTGAAAACGGATGTGATTAATGAAGGAGAAACATCGTGTGATGTACGACTAAACTTCTCATCGGACTCTGATGAGGACAATGTACCAATAGCCAAAAGGAGATTCTTTATAGCACATATGTTCATTAACTATAATCTCGGACACACTAAAACTAACATAATTGTGCAATTCATTGAAAAACCATCGAAGTAG

Protein sequence

MYGKSTTSKGGNHSTLLHVQRYTVKRSLGFLEACSSQTLNVMAKGIYGTLFRAQRYIVNNSLGFKKTHSFTDIKRSAKSDKVEKKMVCRSKRCLGSRLKNIKSNKDDSIVIDDNIKEEVRNEEPKEYQSLQIIYPEDDDEDLREPIGTQIVVYQNQKFVKTDVINEGETSCDVRLNFSSDSDEDNVPIAKRRFFIAHMFINYNLGHTKTNIIVQFIEKPSK
Homology
[Close]
BLAST of MELO3C032569.2.1 vs. NCBI nr
Match: XP_008464749.1 (PREDICTED: uncharacterized protein LOC103502558 isoform X2 [Cucumis melo])

HSP 1 Score: 62.0 bits (149), Expect = 2.9e-06
Identity = 28/48 (58.33%), Postives = 43/48 (89.58%), Query Frame = 0 

Query: 96  SRLKNIKSNKDDSIVIDDNIKEEVRNEEPKEYQSLQIIYPEDDDEDLR 144
           ++LK IKS+KD+SI+I+DN +E++RNEEP +YQ +Q IYP+DD+E+L+
Sbjct: 108 NKLKKIKSSKDNSILIEDNEEEDIRNEEPLDYQPIQTIYPKDDEEELQ 155

[Close]
BLAST of MELO3C032569.2.1 vs. TrEMBL
Match: tr|A0A1S3CM64|A0A1S3CM64_CUCME (uncharacterized protein LOC103502558 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502558 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.9e-06
Identity = 28/48 (58.33%), Postives = 43/48 (89.58%), Query Frame = 0 

Query: 96  SRLKNIKSNKDDSIVIDDNIKEEVRNEEPKEYQSLQIIYPEDDDEDLR 144
           ++LK IKS+KD+SI+I+DN +E++RNEEP +YQ +Q IYP+DD+E+L+
Sbjct: 108 NKLKKIKSSKDNSILIEDNEEEDIRNEEPLDYQPIQTIYPKDDEEELQ 155

The following BLAST results are available for this feature:
BLAST of MELO3C032569.2.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008464749.12.9e-0658.33PREDICTED: uncharacterized protein LOC103502558 isoform X2 [Cucumis melo][more]
BLAST of MELO3C032569.2.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C032569.2.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C032569.2.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CM64|A0A1S3CM64_CUCME1.9e-0658.33uncharacterized protein LOC103502558 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051301 cell division
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C032569.2MELO3C032569.2gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C032569.2.1MELO3C032569.2.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C032569.2.1.CDS.1MELO3C032569.2.1.CDS.1CDS
MELO3C032569.2.1.CDS.2MELO3C032569.2.1.CDS.2CDS
MELO3C032569.2.1.CDS.3MELO3C032569.2.1.CDS.3CDS
MELO3C032569.2.1.CDS.4MELO3C032569.2.1.CDS.4CDS
MELO3C032569.2.1.CDS.5MELO3C032569.2.1.CDS.5CDS
MELO3C032569.2.1.CDS.6MELO3C032569.2.1.CDS.6CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C032569.2.1.exon.1MELO3C032569.2.1.exon.1exon
MELO3C032569.2.1.exon.2MELO3C032569.2.1.exon.2exon
MELO3C032569.2.1.exon.3MELO3C032569.2.1.exon.3exon
MELO3C032569.2.1.exon.4MELO3C032569.2.1.exon.4exon
MELO3C032569.2.1.exon.5MELO3C032569.2.1.exon.5exon
MELO3C032569.2.1.exon.6MELO3C032569.2.1.exon.6exon