MELO3C031813.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCGTGAATTCTATCCCGCCGCCGTCCAAATTCTTTGTTTAAAGAGTGAATTAGATTAGCCATCCCAAAACCATCATCTTTGTTTCTTCTCTTCATCCTTAATAATCCCATGGCGATCTCTCTTCTCACGCTCTCTCCCTAAAACCCTAATTTTGGGTTCTACATTCTCACGTTCCTTCCTTACTGCCACCGGAACCGCCGTATCAGCCTCTTCTCGCTCATCTTTCTCCCTTCTGCGCCGCCTCCTTCCCCTCGCTGCTATAGTCGCCGCTGATTTCGGGTTTCTCTCTTCTGCCATGAGCGTGAGGGACTTTTCTACGTCTGACCCGAAACCTAAGTACTCTAACGACCCACCCACATTTTCGGATTATGGCTGTGATTTCGAACACTGGCTCGTTGTCATGGATTTGCCAAGGGCTAAACTCACGAGGGATGAGATGATCAACATCTATATCAAAACCCTTGCCATGGTTGTTGGAAGGTGAAATCTCTCTCAATTTTTAAATTTTTTATTATTATTATTTTATTTATTTTCTCTTCTTAATGTTTCTCTTTTGGTGTTGTAGTGATTATAATTTGATATTTAGAACGGAGTGGCAATGAATTGGTTCATTTCTAGTGGTTGCTGAAGAAAAATGTGCAGAAAGGAAACAAAGAGTTTAGTGATTTTTCAAGTTTTAGTTTTTTCCAATGTTTGAAATATTTTTAACTATATTACTTATTTCAGAACCCTTAACTTTTTGTCTTAAAACGAATTCTGTTTATCTATACACATATCTATGCTCTGAGTTTGAGAATTATGAATGGAATTTTGGGTCACGATTGGTAATAACTTAGTTCTTTTGTGATAAATGGTATCGGTAGTCATTTGTGCCTTTTCTTCTTCATACAGTGAGGAAGAAGCTAGGATGAAGATGTAATCTTGTTTCAACTAAATTCACCATTTTATTTGGGTGCCTTGTTTCTCAAGAAGTTTCTCACAAAATCAAAGATATATATAAATATACCATCGTTGTGTCCATTTTTTTGTCTCTTGTATTGTTGATTCTCTGAAGTCGTAACTATTCCTTCTTTTTTTAGAGCTGCCTAAGGTCCAAGTGGTCTTTTCTGATAGATACATTGATATTGAAAACAAAAACTATAGAGGTAATTGATTCTTAGTTATATTTATTTCTCACATCTTCAACCAATTAGTTGTACGTTTGTCTTAATGTGTATTCATGGTTTATTTGGTGTTTGATAGGGGAGCCCTTTATAAACGGACAAGCTGTTCCATATGACCTCAAGTACCATCAGCAGTACTATAAACGAATTAATAGACTCGATCGGCCATGCGAAGCATGTAAGCTCCTATTTGGAGGAATTGAACTTTCACATATTAGACTTTGGAGCGATTCGGAGGAGTTAGACTAAAGAGATGTTAGACTTTAAATATTGCATATTCTTATTCCGAGTAGTTTCTTCTAATTTTATTTTATTTTATTTTTAATTTTACTATAGCTCTTTTAATTATGAAATTTCTATTTTATCATTTAAATTATTTAATTTTTCTTTTTGCCCTTGA TTCGTGAATTCTATCCCGCCGCCGTCCAAATTCTTTGTTTAAAGAGTGAATTAGATTAGCCATCCCAAAACCATCATCTTTGTTTCTTCTCTTCATCCTTAATAATCCCATGGCGATCTCTCTTCTCACGCTCTCTCCCTAAAACCCTAATTTTGGGTTCTACATTCTCACGTTCCTTCCTTACTGCCACCGGAACCGCCGTATCAGCCTCTTCTCGCTCATCTTTCTCCCTTCTGCGCCGCCTCCTTCCCCTCGCTGCTATAGTCGCCGCTGATTTCGGGTTTCTCTCTTCTGCCATGAGCGTGAGGGACTTTTCTACGTCTGACCCGAAACCTAAGTACTCTAACGACCCACCCACATTTTCGGATTATGGCTGTGATTTCGAACACTGGCTCGTTGTCATGGATTTGCCAAGGGCTAAACTCACGAGGGATGAGATGATCAACATCTATATCAAAACCCTTGCCATGGTTGTTGGAAGATACATTGATATTGAAAACAAAAACTATAGAGGGGAGCCCTTTATAAACGGACAAGCTGTTCCATATGACCTCAAGTACCATCAGCAGTACTATAAACGAATTAATAGACTCGATCGGCCATGCGAAGCATGTAAGCTCCTATTTGGAGGAATTGAACTTTCACATATTAGACTTTGGAGCGATTCGGAGGAGTTAGACTAAAGAGATGTTAGACTTTAAATATTGCATATTCTTATTCCGAGTAGTTTCTTCTAATTTTATTTTATTTTATTTTTAATTTTACTATAGCTCTTTTAATTATGAAATTTCTATTTTATCATTTAAATTATTTAATTTTTCTTTTTGCCCTTGA ATGAGCGTGAGGGACTTTTCTACGTCTGACCCGAAACCTAAGTACTCTAACGACCCACCCACATTTTCGGATTATGGCTGTGATTTCGAACACTGGCTCGTTGTCATGGATTTGCCAAGGGCTAAACTCACGAGGGATGAGATGATCAACATCTATATCAAAACCCTTGCCATGGTTGTTGGAAGATACATTGATATTGAAAACAAAAACTATAGAGGGGAGCCCTTTATAAACGGACAAGCTGTTCCATATGACCTCAAGTACCATCAGCAGTACTATAAACGAATTAATAGACTCGATCGGCCATGCGAAGCATGTAAGCTCCTATTTGGAGGAATTGAACTTTCACATATTAGACTTTGGAGCGATTCGGAGGAGTTAGACTAA MSVRDFSTSDPKPKYSNDPPTFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVGRYIDIENKNYRGEPFINGQAVPYDLKYHQQYYKRINRLDRPCEACKLLFGGIELSHIRLWSDSEELD
BLAST of MELO3C031813.2.1 vs. NCBI nr
Match: XP_008456056.1 (PREDICTED: multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Cucumis melo]) HSP 1 Score: 144.8 bits (364), Expect = 2.0e-31 Identity = 85/155 (54.84%), Postives = 90/155 (58.06%), Query Frame = 0
BLAST of MELO3C031813.2.1 vs. NCBI nr
Match: XP_008451724.1 (PREDICTED: multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Cucumis melo]) HSP 1 Score: 109.4 bits (272), Expect = 9.3e-21 Identity = 64/146 (43.84%), Postives = 78/146 (53.42%), Query Frame = 0
BLAST of MELO3C031813.2.1 vs. NCBI nr
Match: KGN53589.1 (hypothetical protein Csa_4G083630 [Cucumis sativus]) HSP 1 Score: 106.3 bits (264), Expect = 7.8e-20 Identity = 62/146 (42.47%), Postives = 78/146 (53.42%), Query Frame = 0
BLAST of MELO3C031813.2.1 vs. NCBI nr
Match: XP_011653303.1 (PREDICTED: uncharacterized protein At3g15000, mitochondrial [Cucumis sativus]) HSP 1 Score: 106.3 bits (264), Expect = 7.8e-20 Identity = 62/146 (42.47%), Postives = 78/146 (53.42%), Query Frame = 0
BLAST of MELO3C031813.2.1 vs. NCBI nr
Match: XP_008451723.1 (PREDICTED: multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Cucumis melo]) HSP 1 Score: 105.9 bits (263), Expect = 1.0e-19 Identity = 64/154 (41.56%), Postives = 79/154 (51.30%), Query Frame = 0
BLAST of MELO3C031813.2.1 vs. TAIR10
Match: AT3G15000.1 (cobalt ion binding) HSP 1 Score: 94.7 bits (234), Expect = 4.3e-20 Identity = 52/134 (38.81%), Postives = 70/134 (52.24%), Query Frame = 0
BLAST of MELO3C031813.2.1 vs. TAIR10
Match: AT3G06790.1 (plastid developmental protein DAG, putative) HSP 1 Score: 65.9 bits (159), Expect = 2.1e-11 Identity = 37/121 (30.58%), Postives = 53/121 (43.80%), Query Frame = 0
BLAST of MELO3C031813.2.1 vs. TAIR10
Match: AT1G11430.1 (plastid developmental protein DAG, putative) HSP 1 Score: 55.8 bits (133), Expect = 2.2e-08 Identity = 30/103 (29.13%), Postives = 46/103 (44.66%), Query Frame = 0
BLAST of MELO3C031813.2.1 vs. TAIR10
Match: AT2G33430.1 (differentiation and greening-like 1) HSP 1 Score: 54.3 bits (129), Expect = 6.4e-08 Identity = 38/125 (30.40%), Postives = 53/125 (42.40%), Query Frame = 0
BLAST of MELO3C031813.2.1 vs. TAIR10
Match: AT1G32580.1 (plastid developmental protein DAG, putative) HSP 1 Score: 53.1 bits (126), Expect = 1.4e-07 Identity = 30/102 (29.41%), Postives = 44/102 (43.14%), Query Frame = 0
BLAST of MELO3C031813.2.1 vs. Swiss-Prot
Match: sp|Q9LKA5|MORF8_ARATH (Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF8 PE=1 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 7.7e-19 Identity = 52/134 (38.81%), Postives = 70/134 (52.24%), Query Frame = 0
BLAST of MELO3C031813.2.1 vs. Swiss-Prot
Match: sp|Q84JZ6|MORF3_ARATH (Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF3 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.8e-10 Identity = 37/121 (30.58%), Postives = 53/121 (43.80%), Query Frame = 0
BLAST of MELO3C031813.2.1 vs. Swiss-Prot
Match: sp|Q38732|DAG_ANTMA (DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 3.0e-07 Identity = 31/118 (26.27%), Postives = 51/118 (43.22%), Query Frame = 0
BLAST of MELO3C031813.2.1 vs. Swiss-Prot
Match: sp|Q9CAH0|MORF7_ARATH (Multiple organellar RNA editing factor 7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF7 PE=1 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 4.0e-07 Identity = 31/114 (27.19%), Postives = 49/114 (42.98%), Query Frame = 0
BLAST of MELO3C031813.2.1 vs. Swiss-Prot
Match: sp|Q9LPZ1|MORF9_ARATH (Multiple organellar RNA editing factor 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF9 PE=1 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 4.0e-07 Identity = 30/103 (29.13%), Postives = 46/103 (44.66%), Query Frame = 0
BLAST of MELO3C031813.2.1 vs. TrEMBL
Match: tr|A0A1S3C315|A0A1S3C315_CUCME (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103496103 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.3e-31 Identity = 85/155 (54.84%), Postives = 90/155 (58.06%), Query Frame = 0
BLAST of MELO3C031813.2.1 vs. TrEMBL
Match: tr|A0A1S3BTA4|A0A1S3BTA4_CUCME (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103492931 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 6.1e-21 Identity = 64/146 (43.84%), Postives = 78/146 (53.42%), Query Frame = 0
BLAST of MELO3C031813.2.1 vs. TrEMBL
Match: tr|A0A0A0KXM3|A0A0A0KXM3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083630 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 5.2e-20 Identity = 62/146 (42.47%), Postives = 78/146 (53.42%), Query Frame = 0
BLAST of MELO3C031813.2.1 vs. TrEMBL
Match: tr|A0A1S3BSY7|A0A1S3BSY7_CUCME (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103492930 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 6.8e-20 Identity = 64/154 (41.56%), Postives = 79/154 (51.30%), Query Frame = 0
BLAST of MELO3C031813.2.1 vs. TrEMBL
Match: tr|A0A0D2UZ56|A0A0D2UZ56_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G369000 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 8.8e-20 Identity = 59/136 (43.38%), Postives = 75/136 (55.15%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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