MELO3C031813.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C031813.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial
Location	chr06 : 7234047 .. 7235610 (+)
Sequence length	834

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCGTGAATTCTATCCCGCCGCCGTCCAAATTCTTTGTTTAAAGAGTGAATTAGATTAGCCATCCCAAAACCATCATCTTTGTTTCTTCTCTTCATCCTTAATAATCCCATGGCGATCTCTCTTCTCACGCTCTCTCCCTAAAACCCTAATTTTGGGTTCTACATTCTCACGTTCCTTCCTTACTGCCACCGGAACCGCCGTATCAGCCTCTTCTCGCTCATCTTTCTCCCTTCTGCGCCGCCTCCTTCCCCTCGCTGCTATAGTCGCCGCTGATTTCGGGTTTCTCTCTTCTGCCATGAGCGTGAGGGACTTTTCTACGTCTGACCCGAAACCTAAGTACTCTAACGACCCACCCACATTTTCGGATTATGGCTGTGATTTCGAACACTGGCTCGTTGTCATGGATTTGCCAAGGGCTAAACTCACGAGGGATGAGATGATCAACATCTATATCAAAACCCTTGCCATGGTTGTTGGAAGGTGAAATCTCTCTCAATTTTTAAATTTTTTATTATTATTATTTTATTTATTTTCTCTTCTTAATGTTTCTCTTTTGGTGTTGTAGTGATTATAATTTGATATTTAGAACGGAGTGGCAATGAATTGGTTCATTTCTAGTGGTTGCTGAAGAAAAATGTGCAGAAAGGAAACAAAGAGTTTAGTGATTTTTCAAGTTTTAGTTTTTTCCAATGTTTGAAATATTTTTAACTATATTACTTATTTCAGAACCCTTAACTTTTTGTCTTAAAACGAATTCTGTTTATCTATACACATATCTATGCTCTGAGTTTGAGAATTATGAATGGAATTTTGGGTCACGATTGGTAATAACTTAGTTCTTTTGTGATAAATGGTATCGGTAGTCATTTGTGCCTTTTCTTCTTCATACAGTGAGGAAGAAGCTAGGATGAAGATGTAATCTTGTTTCAACTAAATTCACCATTTTATTTGGGTGCCTTGTTTCTCAAGAAGTTTCTCACAAAATCAAAGATATATATAAATATACCATCGTTGTGTCCATTTTTTTGTCTCTTGTATTGTTGATTCTCTGAAGTCGTAACTATTCCTTCTTTTTTTAGAGCTGCCTAAGGTCCAAGTGGTCTTTTCTGATAGATACATTGATATTGAAAACAAAAACTATAGAGGTAATTGATTCTTAGTTATATTTATTTCTCACATCTTCAACCAATTAGTTGTACGTTTGTCTTAATGTGTATTCATGGTTTATTTGGTGTTTGATAGGGGAGCCCTTTATAAACGGACAAGCTGTTCCATATGACCTCAAGTACCATCAGCAGTACTATAAACGAATTAATAGACTCGATCGGCCATGCGAAGCATGTAAGCTCCTATTTGGAGGAATTGAACTTTCACATATTAGACTTTGGAGCGATTCGGAGGAGTTAGACTAAAGAGATGTTAGACTTTAAATATTGCATATTCTTATTCCGAGTAGTTTCTTCTAATTTTATTTTATTTTATTTTTAATTTTACTATAGCTCTTTTAATTATGAAATTTCTATTTTATCATTTAAATTATTTAATTTTTCTTTTTGCCCTTGA

mRNA sequence

TTCGTGAATTCTATCCCGCCGCCGTCCAAATTCTTTGTTTAAAGAGTGAATTAGATTAGCCATCCCAAAACCATCATCTTTGTTTCTTCTCTTCATCCTTAATAATCCCATGGCGATCTCTCTTCTCACGCTCTCTCCCTAAAACCCTAATTTTGGGTTCTACATTCTCACGTTCCTTCCTTACTGCCACCGGAACCGCCGTATCAGCCTCTTCTCGCTCATCTTTCTCCCTTCTGCGCCGCCTCCTTCCCCTCGCTGCTATAGTCGCCGCTGATTTCGGGTTTCTCTCTTCTGCCATGAGCGTGAGGGACTTTTCTACGTCTGACCCGAAACCTAAGTACTCTAACGACCCACCCACATTTTCGGATTATGGCTGTGATTTCGAACACTGGCTCGTTGTCATGGATTTGCCAAGGGCTAAACTCACGAGGGATGAGATGATCAACATCTATATCAAAACCCTTGCCATGGTTGTTGGAAGATACATTGATATTGAAAACAAAAACTATAGAGGGGAGCCCTTTATAAACGGACAAGCTGTTCCATATGACCTCAAGTACCATCAGCAGTACTATAAACGAATTAATAGACTCGATCGGCCATGCGAAGCATGTAAGCTCCTATTTGGAGGAATTGAACTTTCACATATTAGACTTTGGAGCGATTCGGAGGAGTTAGACTAAAGAGATGTTAGACTTTAAATATTGCATATTCTTATTCCGAGTAGTTTCTTCTAATTTTATTTTATTTTATTTTTAATTTTACTATAGCTCTTTTAATTATGAAATTTCTATTTTATCATTTAAATTATTTAATTTTTCTTTTTGCCCTTGA

Coding sequence (CDS)

ATGAGCGTGAGGGACTTTTCTACGTCTGACCCGAAACCTAAGTACTCTAACGACCCACCCACATTTTCGGATTATGGCTGTGATTTCGAACACTGGCTCGTTGTCATGGATTTGCCAAGGGCTAAACTCACGAGGGATGAGATGATCAACATCTATATCAAAACCCTTGCCATGGTTGTTGGAAGATACATTGATATTGAAAACAAAAACTATAGAGGGGAGCCCTTTATAAACGGACAAGCTGTTCCATATGACCTCAAGTACCATCAGCAGTACTATAAACGAATTAATAGACTCGATCGGCCATGCGAAGCATGTAAGCTCCTATTTGGAGGAATTGAACTTTCACATATTAGACTTTGGAGCGATTCGGAGGAGTTAGACTAA

Protein sequence

MSVRDFSTSDPKPKYSNDPPTFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVGRYIDIENKNYRGEPFINGQAVPYDLKYHQQYYKRINRLDRPCEACKLLFGGIELSHIRLWSDSEELD

Homology

[Close]

BLAST of MELO3C031813.2.1 vs. NCBI nr
Match: XP_008456056.1 (PREDICTED: multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Cucumis melo])

HSP 1 Score: 144.8 bits (364), Expect = 2.0e-31
Identity = 85/155 (54.84%), Postives = 90/155 (58.06%), Query Frame = 0


Query: 2   SVRDFSTS-DPKPKYSNDPPTFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVV 61
           SVR FSTS DPKP   N PPTFSD GCDF+HWLVVMDL  A+LTRDEMINIYIKTLAMVV
Sbjct: 64  SVRYFSTSDDPKP---NGPPTFSDDGCDFKHWLVVMDLRGAELTRDEMINIYIKTLAMVV 123

Query: 62  G--------------------------------------------RYIDIENKNYRGEPF 112
           G                                             Y DIENKNY GEPF
Sbjct: 124 GSEEEARMKMYSVSTKFFFSFGCLVSEELSHKIKELPKVLWVIPDSYTDIENKNYGGEPF 183

[Close]

BLAST of MELO3C031813.2.1 vs. NCBI nr
Match: XP_008451724.1 (PREDICTED: multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 109.4 bits (272), Expect = 9.3e-21
Identity = 64/146 (43.84%), Postives = 78/146 (53.42%), Query Frame = 0


Query: 2   SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIY 61
           SVRDFST       +DP P +SN PP  T    GCDFEHWLVVM+ P  +LTRDE+I+ Y
Sbjct: 65  SVRDFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPDEQLTRDEIIDSY 124

Query: 62  IKTLAMVVG--------------------------------------------RYIDIEN 95
           IKTLAMVVG                                             Y+D++N
Sbjct: 125 IKTLAMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKN 184

[Close]

BLAST of MELO3C031813.2.1 vs. NCBI nr
Match: KGN53589.1 (hypothetical protein Csa_4G083630 [Cucumis sativus])

HSP 1 Score: 106.3 bits (264), Expect = 7.8e-20
Identity = 62/146 (42.47%), Postives = 78/146 (53.42%), Query Frame = 0


Query: 2   SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIY 61
           S+RDFST       +DP P +SN PP  T    GCDFEHWLVVM+ P  +LTRDE+I+ Y
Sbjct: 65  SLRDFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPDEQLTRDEIIDSY 124

Query: 62  IKTLAMVVG--------------------------------------------RYIDIEN 95
           IKTLAMVVG                                             Y+D++N
Sbjct: 125 IKTLAMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKN 184

[Close]

BLAST of MELO3C031813.2.1 vs. NCBI nr
Match: XP_011653303.1 (PREDICTED: uncharacterized protein At3g15000, mitochondrial [Cucumis sativus])

HSP 1 Score: 106.3 bits (264), Expect = 7.8e-20
Identity = 62/146 (42.47%), Postives = 78/146 (53.42%), Query Frame = 0


Query: 2   SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIY 61
           S+RDFST       +DP P +SN PP  T    GCDFEHWLVVM+ P  +LTRDE+I+ Y
Sbjct: 65  SLRDFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPDEQLTRDEIIDSY 124

Query: 62  IKTLAMVVG--------------------------------------------RYIDIEN 95
           IKTLAMVVG                                             Y+D++N
Sbjct: 125 IKTLAMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKN 184

[Close]

BLAST of MELO3C031813.2.1 vs. NCBI nr
Match: XP_008451723.1 (PREDICTED: multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Cucumis melo])

HSP 1 Score: 105.9 bits (263), Expect = 1.0e-19
Identity = 64/154 (41.56%), Postives = 79/154 (51.30%), Query Frame = 0


Query: 2   SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIY 61
           SVR FST        DP P  S+ PP  T    GCDFEHWLVVM+ P  +LTRDE+I+ Y
Sbjct: 62  SVRVFSTRSTSSSIKDPNPNSSSRPPKETILLDGCDFEHWLVVMEKPDDQLTRDEIIDTY 121

Query: 62  IKTLAMVVG--------------------------------------------RYIDIEN 103
           IKTLAMVVG                                             Y+D++N
Sbjct: 122 IKTLAMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKN 181

[Close]

BLAST of MELO3C031813.2.1 vs. TAIR10
Match: AT3G15000.1 (cobalt ion binding)

HSP 1 Score: 94.7 bits (234), Expect = 4.3e-20
Identity = 52/134 (38.81%), Postives = 70/134 (52.24%), Query Frame = 0


Query: 7   STSDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG--- 66
           S +DP P +SN PP  T    GCDFEHWLVV++ P+ + TRDE+I+ YIKTLA +VG   
Sbjct: 73  SLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEPPQGEPTRDEIIDSYIKTLAQIVGSED 132

Query: 67  -----------------------------------------RYIDIENKNYRGEPFINGQ 95
                                                     Y+D+ NK+Y GEPFI+G+
Sbjct: 133 EARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGK 192

[Close]

BLAST of MELO3C031813.2.1 vs. TAIR10
Match: AT3G06790.1 (plastid developmental protein DAG, putative)

HSP 1 Score: 65.9 bits (159), Expect = 2.1e-11
Identity = 37/121 (30.58%), Postives = 53/121 (43.80%), Query Frame = 0


Query: 9   SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG----- 68
           +DP P +SN PP  T    GCD+EHWL+VM+    K T +EMIN Y+KTL  V+G     
Sbjct: 72  NDPSPNWSNRPPKETILLDGCDYEHWLIVMEFTDPKPTEEEMINSYVKTLTSVLGWQEEA 131

Query: 69  ---------------------------------------RYIDIENKNYRGEPFINGQAV 84
                                                   Y+D+ NK+Y G+ ++ G+ +
Sbjct: 132 KKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYGGDLYVEGKVI 191

[Close]

BLAST of MELO3C031813.2.1 vs. TAIR10
Match: AT1G11430.1 (plastid developmental protein DAG, putative)

HSP 1 Score: 55.8 bits (133), Expect = 2.2e-08
Identity = 30/103 (29.13%), Postives = 46/103 (44.66%), Query Frame = 0


Query: 26  GCDFEHWLVVMDLPRAKL-TRDEMINIYIKTLAMVVG----------------------- 84
           GCD+ HWL+VM+ P+    +RD+MI+ Y+ TLA V+G                       
Sbjct: 84  GCDYNHWLIVMEFPKDPAPSRDQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCT 143

[Close]

BLAST of MELO3C031813.2.1 vs. TAIR10
Match: AT2G33430.1 (differentiation and greening-like 1)

HSP 1 Score: 54.3 bits (129), Expect = 6.4e-08
Identity = 38/125 (30.40%), Postives = 53/125 (42.40%), Query Frame = 0


Query: 6   FSTSDPKPKYSNDPPTFSD---YGCDFEHWLVVMDLPRAK-LTRDEMINIYIKTLAMVVG 65
           +S  +    +S+ PPT       GCD+EHWL+VMD P  +  T+ +MI+ YI+TLA VVG
Sbjct: 58  YSPLNSGSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVG 117

Query: 66  --------------------------------------------RYIDIENKNYRGEPFI 83
                                                        Y+D ENK+Y  E F+
Sbjct: 118 SEEEAKKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFV 177

[Close]

BLAST of MELO3C031813.2.1 vs. TAIR10
Match: AT1G32580.1 (plastid developmental protein DAG, putative)

HSP 1 Score: 53.1 bits (126), Expect = 1.4e-07
Identity = 30/102 (29.41%), Postives = 44/102 (43.14%), Query Frame = 0


Query: 26  GCDFEHWLVVMDLPRAK-LTRDEMINIYIKTLAMVVG----------------------- 83
           GCD+EHWL+VMD P  +  T+ +MI+ Y++TLA ++G                       
Sbjct: 90  GCDYEHWLIVMDKPGGENATKQQMIDCYVQTLAKIIGSEEEAKKKIYNVSCERYFGFGCE 149

[Close]

BLAST of MELO3C031813.2.1 vs. Swiss-Prot
Match: sp|Q9LKA5|MORF8_ARATH (Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF8 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 7.7e-19
Identity = 52/134 (38.81%), Postives = 70/134 (52.24%), Query Frame = 0


Query: 7   STSDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG--- 66
           S +DP P +SN PP  T    GCDFEHWLVV++ P+ + TRDE+I+ YIKTLA +VG   
Sbjct: 73  SLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEPPQGEPTRDEIIDSYIKTLAQIVGSED 132

Query: 67  -----------------------------------------RYIDIENKNYRGEPFINGQ 95
                                                     Y+D+ NK+Y GEPFI+G+
Sbjct: 133 EARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGK 192

[Close]

BLAST of MELO3C031813.2.1 vs. Swiss-Prot
Match: sp|Q84JZ6|MORF3_ARATH (Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF3 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.8e-10
Identity = 37/121 (30.58%), Postives = 53/121 (43.80%), Query Frame = 0


Query: 9   SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG----- 68
           +DP P +SN PP  T    GCD+EHWL+VM+    K T +EMIN Y+KTL  V+G     
Sbjct: 72  NDPSPNWSNRPPKETILLDGCDYEHWLIVMEFTDPKPTEEEMINSYVKTLTSVLGCEEEA 131

Query: 69  ---------------------------------------RYIDIENKNYRGEPFINGQAV 84
                                                   Y+D+ NK+Y G+ ++ G+ +
Sbjct: 132 KKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYGGDLYVEGKVI 191

[Close]

BLAST of MELO3C031813.2.1 vs. Swiss-Prot
Match: sp|Q38732|DAG_ANTMA (DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.0e-07
Identity = 31/118 (26.27%), Postives = 51/118 (43.22%), Query Frame = 0


Query: 26  GCDFEHWLVVMDLPRAKL-TRDEMINIYIKTLAMVVG----------------------- 85
           GCD+ HWL+VM+ P+    TR++MI+ Y+ TLA V+G                       
Sbjct: 83  GCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCT 142

Query: 86  ---------------------RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYKRINR 99
                                 YID++NK+Y G+ ++NG+ +P     +Q    R ++
Sbjct: 143 VTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCQYPTYQPKQSRSSK 200

[Close]

BLAST of MELO3C031813.2.1 vs. Swiss-Prot
Match: sp|Q9CAH0|MORF7_ARATH (Multiple organellar RNA editing factor 7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF7 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.0e-07
Identity = 31/114 (27.19%), Postives = 49/114 (42.98%), Query Frame = 0


Query: 26  GCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVGR----------------------- 85
           GCD++HWLV+M  P    TR+ ++  +++TLAM +G                        
Sbjct: 51  GCDYKHWLVLMKPPNGYPTRNHIVQSFVETLAMALGSEEEAKRSIYSVSTKYYYAFGCRI 110

Query: 86  ----------------------YIDIENKNYRGEPFINGQAVPYDLKYHQQYYK 95
                                  +D +N+ Y GEPF++G+ VPYD KYH  + +
Sbjct: 111 HEPLTYKIRSLPDVKWVLPDSFIVDGDNR-YGGEPFVDGEVVPYDEKYHADWLR 163

[Close]

BLAST of MELO3C031813.2.1 vs. Swiss-Prot
Match: sp|Q9LPZ1|MORF9_ARATH (Multiple organellar RNA editing factor 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF9 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.0e-07
Identity = 30/103 (29.13%), Postives = 46/103 (44.66%), Query Frame = 0


Query: 26  GCDFEHWLVVMDLPRAKL-TRDEMINIYIKTLAMVVG----------------------- 84
           GCD+ HWL+VM+ P+    +RD+MI+ Y+ TLA V+G                       
Sbjct: 84  GCDYNHWLIVMEFPKDPAPSRDQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCT 143

[Close]

BLAST of MELO3C031813.2.1 vs. TrEMBL
Match: tr|A0A1S3C315|A0A1S3C315_CUCME (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103496103 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.3e-31
Identity = 85/155 (54.84%), Postives = 90/155 (58.06%), Query Frame = 0


Query: 2   SVRDFSTS-DPKPKYSNDPPTFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVV 61
           SVR FSTS DPKP   N PPTFSD GCDF+HWLVVMDL  A+LTRDEMINIYIKTLAMVV
Sbjct: 64  SVRYFSTSDDPKP---NGPPTFSDDGCDFKHWLVVMDLRGAELTRDEMINIYIKTLAMVV 123

Query: 62  G--------------------------------------------RYIDIENKNYRGEPF 112
           G                                             Y DIENKNY GEPF
Sbjct: 124 GSEEEARMKMYSVSTKFFFSFGCLVSEELSHKIKELPKVLWVIPDSYTDIENKNYGGEPF 183

[Close]

BLAST of MELO3C031813.2.1 vs. TrEMBL
Match: tr|A0A1S3BTA4|A0A1S3BTA4_CUCME (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103492931 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 6.1e-21
Identity = 64/146 (43.84%), Postives = 78/146 (53.42%), Query Frame = 0


Query: 2   SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIY 61
           SVRDFST       +DP P +SN PP  T    GCDFEHWLVVM+ P  +LTRDE+I+ Y
Sbjct: 65  SVRDFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPDEQLTRDEIIDSY 124

Query: 62  IKTLAMVVG--------------------------------------------RYIDIEN 95
           IKTLAMVVG                                             Y+D++N
Sbjct: 125 IKTLAMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKN 184

[Close]

BLAST of MELO3C031813.2.1 vs. TrEMBL
Match: tr|A0A0A0KXM3|A0A0A0KXM3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083630 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.2e-20
Identity = 62/146 (42.47%), Postives = 78/146 (53.42%), Query Frame = 0


Query: 2   SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIY 61
           S+RDFST       +DP P +SN PP  T    GCDFEHWLVVM+ P  +LTRDE+I+ Y
Sbjct: 65  SLRDFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPDEQLTRDEIIDSY 124

Query: 62  IKTLAMVVG--------------------------------------------RYIDIEN 95
           IKTLAMVVG                                             Y+D++N
Sbjct: 125 IKTLAMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKN 184

[Close]

BLAST of MELO3C031813.2.1 vs. TrEMBL
Match: tr|A0A1S3BSY7|A0A1S3BSY7_CUCME (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103492930 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 6.8e-20
Identity = 64/154 (41.56%), Postives = 79/154 (51.30%), Query Frame = 0


Query: 2   SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIY 61
           SVR FST        DP P  S+ PP  T    GCDFEHWLVVM+ P  +LTRDE+I+ Y
Sbjct: 62  SVRVFSTRSTSSSIKDPNPNSSSRPPKETILLDGCDFEHWLVVMEKPDDQLTRDEIIDTY 121

Query: 62  IKTLAMVVG--------------------------------------------RYIDIEN 103
           IKTLAMVVG                                             Y+D++N
Sbjct: 122 IKTLAMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKN 181

[Close]

BLAST of MELO3C031813.2.1 vs. TrEMBL
Match: tr|A0A0D2UZ56|A0A0D2UZ56_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G369000 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.8e-20
Identity = 59/136 (43.38%), Postives = 75/136 (55.15%), Query Frame = 0


Query: 2   SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIY 61
           +V+ FST       +DP P YSN PP  T    GCDFEHWLVV++ P+   TRDE+I+ Y
Sbjct: 75  TVKSFSTRAARSSLNDPSPNYSNRPPKETILLDGCDFEHWLVVVEPPKEDATRDEIIDSY 134

Query: 62  IKTLAMVVG----------------------------------RYIDIENKNYRGEPFIN 95
           IKTLA VVG                                   Y+D++NK+Y GEPFIN
Sbjct: 135 IKTLAQVVGSEDEARMKIYSVSTRHYYAFGALVSEELSYKIKDSYLDVKNKDYGGEPFIN 194

The following BLAST results are available for this feature:

BLAST of MELO3C031813.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456056.1	2.0e-31	54.84	PREDICTED: multiple organellar RNA editing factor 8, chloroplastic/mitochondrial...	[more]
XP_008451724.1	9.3e-21	43.84	PREDICTED: multiple organellar RNA editing factor 8, chloroplastic/mitochondrial...	[more]
KGN53589.1	7.8e-20	42.47	hypothetical protein Csa_4G083630 [Cucumis sativus]	[more]
XP_011653303.1	7.8e-20	42.47	PREDICTED: uncharacterized protein At3g15000, mitochondrial [Cucumis sativus]	[more]
XP_008451723.1	1.0e-19	41.56	PREDICTED: multiple organellar RNA editing factor 8, chloroplastic/mitochondrial...	[more]

BLAST of MELO3C031813.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15000.1	4.3e-20	38.81	cobalt ion binding	[more]
AT3G06790.1	2.1e-11	30.58	plastid developmental protein DAG, putative	[more]
AT1G11430.1	2.2e-08	29.13	plastid developmental protein DAG, putative	[more]
AT2G33430.1	6.4e-08	30.40	differentiation and greening-like 1	[more]
AT1G32580.1	1.4e-07	29.41	plastid developmental protein DAG, putative	[more]

BLAST of MELO3C031813.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LKA5\|MORF8_ARATH	7.7e-19	38.81	Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabido...	[more]
sp\|Q84JZ6\|MORF3_ARATH	3.8e-10	30.58	Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana ...	[more]
sp\|Q38732\|DAG_ANTMA	3.0e-07	26.27	DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1	[more]
sp\|Q9CAH0\|MORF7_ARATH	4.0e-07	27.19	Multiple organellar RNA editing factor 7, mitochondrial OS=Arabidopsis thaliana ...	[more]
sp\|Q9LPZ1\|MORF9_ARATH	4.0e-07	29.13	Multiple organellar RNA editing factor 9, chloroplastic OS=Arabidopsis thaliana ...	[more]

BLAST of MELO3C031813.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C315\|A0A1S3C315_CUCME	1.3e-31	54.84	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like OS=Cu...	[more]
tr\|A0A1S3BTA4\|A0A1S3BTA4_CUCME	6.1e-21	43.84	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Cucumis...	[more]
tr\|A0A0A0KXM3\|A0A0A0KXM3_CUCSA	5.2e-20	42.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083630 PE=4 SV=1	[more]
tr\|A0A1S3BSY7\|A0A1S3BSY7_CUCME	6.8e-20	41.56	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like OS=Cu...	[more]
tr\|A0A0D2UZ56\|A0A0D2UZ56_GOSRA	8.8e-20	43.38	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G369000 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0016554	cytidine to uridine editing

Vocabulary: **INTERPRO**
Term	Definition
IPR039206	MORF/ORRM1/DAG-like

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016554	cytidine to uridine editing
biological_process	GO:0080156	mitochondrial mRNA modification
biological_process	GO:0009451	RNA modification
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009536	plastid
molecular_function	GO:0050897	cobalt ion binding
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C031813.2	MELO3C031813.2	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C031813.2.1	MELO3C031813.2.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C031813.2.1.five_prime_UTR.1	MELO3C031813.2.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C031813.2.1.exon.1	MELO3C031813.2.1.exon.1	exon
MELO3C031813.2.1.exon.2	MELO3C031813.2.1.exon.2	exon
MELO3C031813.2.1.exon.3	MELO3C031813.2.1.exon.3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C031813.2.1.CDS.1	MELO3C031813.2.1.CDS.1	CDS
MELO3C031813.2.1.CDS.2	MELO3C031813.2.1.CDS.2	CDS
MELO3C031813.2.1.CDS.3	MELO3C031813.2.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C031813.2.1.three_prime_UTR.1	MELO3C031813.2.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31346:SF4	MULTIPLE ORGANELLAR RNA EDITING FACTOR 8, CHLOROPLASTIC/MITOCHONDRIAL	coord: 7..61
None	No IPR available	PANTHER	PTHR31346:SF4	MULTIPLE ORGANELLAR RNA EDITING FACTOR 8, CHLOROPLASTIC/MITOCHONDRIAL	coord: 63..94
IPR039206	MORF/ORRM1/DAG-like	PANTHER	PTHR31346	FAMILY NOT NAMED	coord: 7..61
IPR039206	MORF/ORRM1/DAG-like	PANTHER	PTHR31346	FAMILY NOT NAMED	coord: 63..94