MELO3C030184.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C030184.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	zinc finger BED domain-containing protein RICESLEEPER 2-like
Location	chr03 : 16072358 .. 16077064 (+)
Sequence length	999

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Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGAAGTTAAAAGTGATTTATTGGAAAAGATTTGATTGATTAAAAGAATTGAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGACCCGTTCGACGTTTAGCTTCAATCCCCGTTCGGCGTTCAAACTTCAACCCAATCTGAATCGCTATTCGCTTCCTTCGTCTCACACTTTAGTCCGACTCCCATGCTTCAATCCCCGTTCGGCAGCTTCAGTCTCCATTCGGCGTTCAAATTTCAACCCAATCTGAATCGCTAATTGTCTTCCTTCAGTCCCCAACTTTAGTTTCCAACTCCCCAGCTTCAATCCCCGTTCGACGTTTAGCTTTAGTCCCTGTTCAGCTTTCAAACTTCAACCCAATCGACTGCCATTGTAACAGGTTTGTTGTATTTGAATTTTGAAATTTAAATTACATTTTATATAAATTATTGTTTGTATTTTGAAACATATTTATATAAATTTTTGTTGGTTGCCATAGAGTGATTGTTGGAAATTACATATTTATATGAATTATGGTTGTTGATTGGATGCTTGCTGGAAATAATTGCAGTGATTGTTGATTGAATGATTGCTGGAAATAATTATTGAATTACAGAAATTACATTATTTTCAACAACCAACAAAAGATCTAATGCTTGCTGGAAATAATTTTGATTGTGGGTCTTAATTGTTTATATTGTTGGTTGATTGTGTGGGTTGTCTGACTTTAGCTTGTTATACTCTTTTAGAAAATTGAAAATAGTGGTTGGTTGCTGAAAATAGTGGCAGTGTTGACTAGTATAGATCTTTTGTTGGTTGTTGAAAATAATGCATGGCAATGGTGACGTGACTGAAAATAATACTTATATTTTTTTTGTTGGTTGCGGTTGCCTTGACTGTTTATATTGTTGGTTGATTGTGTGGATTATCTGACTTTAGTTGTTATATTCTTTTAGACCATGGAGACAAGTAGTGGACAACATAGTGAAACTAGCCCCAGTCTTAGTCCTAGTCCTGCCCCTTCCACTAATAACACAACGGGAACTGTGAGTTCAAGTAAACCACCACTACCCGATAAGAAGAAAGTTAGAGCCACTAAGAAAACAACTTCCACGGTATGGGATCACTTCACAAAGTTGGAAGAAAATAGTTCTAGGTGCACATGCAATTATTGTGATAAAGAGTATTGTTGTGATACTACATCATGTGGAACTAGCACATTATGGAAGCACCTAAAAAATCAGTGTAAGAAGTACCCATATAAGGAAGTAGAAGTAGGACAAACTATTTTGACTCTCCAACAATTATGTAGGAAAGCAGAAGTAGGGCAAACTACTCATTTTAGTCAACAATTATGTAGGGAAGCATGTGCTAAGATGATAATTGTTGATGAGTTGCCATTCAAGTTTATCGAGAATGAGGGATTTAGAAATTTTTGTAGAGTGGCTTGTCCTAAGTTTGACCCTCCTTCAAGATTTACAATTGCTAAAGATATATATCAATTGTACCTTGATGAAAAGAAGAAGTTGAAATCATTCTTAGTTTGCAATTCTCAAATGGTATGTTTAACAACTGACACATGGACTTCTTTGCAAAATGTTAACTACATGGTACTCACTGCACTCATTTCATTACTCATTTCATTGTCATTATTTAGATTGGGTTTTGCATAAAAAGATTTTAAACTTTTGTCAAGTTGCTAATCACAAGGGTGAGACTATTGGAAAGCTGATAGAGAGTTGTTTATTGGAATGGGGGATCGATAAAGTCTTTTCTATAACTGTTGATAATGCAAGTTCAAACGATGGGGCAATTTCGTATATTATGAAAGACTTAGAAGTTGGAAAACCCTAA

mRNA sequence

ATGTTGGAATCCGACTCCCATGCTTCAATCCCCGTTCGGCAGCTTCAGTCTCCATTCGGCGTTCAAATTTCAACCCAATCTGAATCGCTAATTGTCTTCCTTCAGTCCCCAACTTTAGTTTCCAACTCCCCAGCTTCAATCCCCGTTCGACGTTTAGCTTTAGTCCCTGTTCAGCTTTCAAACTTCAACCCAATCGACTGCCATTGTAACAGGTTTGTTACCATGGAGACAAGTAGTGGACAACATAGTGAAACTAGCCCCAGTCTTAGTCCTAGTCCTGCCCCTTCCACTAATAACACAACGGGAACTGTGAGTTCAAGTAAACCACCACTACCCGATAAGAAGAAAGTTAGAGCCACTAAGAAAACAACTTCCACGGTATGGGATCACTTCACAAAGTTGGAAGAAAATAGTTCTAGGTGCACATGCAATTATTGTGATAAAGAGTATTGTTGTGATACTACATCATGTGGAACTAGCACATTATGGAAGCACCTAAAAAATCAGTGTAAGAAGTACCCATATAAGGAAGTAGAAGTAGGACAAACTATTTTGACTCTCCAACAATTATGTAGGAAAGCAGAAGTAGGGCAAACTACTCATTTTAGTCAACAATTATGTAGGGAAGCATGTGCTAAGATGATAATTGTTGATGAGTTGCCATTCAAGTTTATCGAGAATGAGGGATTTAGAAATTTTTGTAGAGTGGCTTGTCCTAAGTTTGACCCTCCTTCAAGATTTACAATTGCTAAAGATATATATCAATTGTACCTTGATGAAAAGAAGAAGTTGAAATCATTCTTAGTTTGCAATTCTCAAATGATTTTAAACTTTTGTCAAGTTGCTAATCACAAGGGTGAGACTATTGGAAAGCTGATAGAGAGTTGTTTATTGGAATGGGGGATCGATAAAGTCTTTTCTATAACTGTTGATAATGCAAGTTCAAACGATGGGGCAATTTCGTATATTATGAAAGACTTAGAAGTTGGAAAACCCTAA

Coding sequence (CDS)

ATGTTGGAATCCGACTCCCATGCTTCAATCCCCGTTCGGCAGCTTCAGTCTCCATTCGGCGTTCAAATTTCAACCCAATCTGAATCGCTAATTGTCTTCCTTCAGTCCCCAACTTTAGTTTCCAACTCCCCAGCTTCAATCCCCGTTCGACGTTTAGCTTTAGTCCCTGTTCAGCTTTCAAACTTCAACCCAATCGACTGCCATTGTAACAGGTTTGTTACCATGGAGACAAGTAGTGGACAACATAGTGAAACTAGCCCCAGTCTTAGTCCTAGTCCTGCCCCTTCCACTAATAACACAACGGGAACTGTGAGTTCAAGTAAACCACCACTACCCGATAAGAAGAAAGTTAGAGCCACTAAGAAAACAACTTCCACGGTATGGGATCACTTCACAAAGTTGGAAGAAAATAGTTCTAGGTGCACATGCAATTATTGTGATAAAGAGTATTGTTGTGATACTACATCATGTGGAACTAGCACATTATGGAAGCACCTAAAAAATCAGTGTAAGAAGTACCCATATAAGGAAGTAGAAGTAGGACAAACTATTTTGACTCTCCAACAATTATGTAGGAAAGCAGAAGTAGGGCAAACTACTCATTTTAGTCAACAATTATGTAGGGAAGCATGTGCTAAGATGATAATTGTTGATGAGTTGCCATTCAAGTTTATCGAGAATGAGGGATTTAGAAATTTTTGTAGAGTGGCTTGTCCTAAGTTTGACCCTCCTTCAAGATTTACAATTGCTAAAGATATATATCAATTGTACCTTGATGAAAAGAAGAAGTTGAAATCATTCTTAGTTTGCAATTCTCAAATGATTTTAAACTTTTGTCAAGTTGCTAATCACAAGGGTGAGACTATTGGAAAGCTGATAGAGAGTTGTTTATTGGAATGGGGGATCGATAAAGTCTTTTCTATAACTGTTGATAATGCAAGTTCAAACGATGGGGCAATTTCGTATATTATGAAAGACTTAGAAGTTGGAAAACCCTAA

Protein sequence

MLESDSHASIPVRQLQSPFGVQISTQSESLIVFLQSPTLVSNSPASIPVRRLALVPVQLSNFNPIDCHCNRFVTMETSSGQHSETSPSLSPSPAPSTNNTTGTVSSSKPPLPDKKKVRATKKTTSTVWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKKYPYKEVEVGQTILTLQQLCRKAEVGQTTHFSQQLCREACAKMIIVDELPFKFIENEGFRNFCRVACPKFDPPSRFTIAKDIYQLYLDEKKKLKSFLVCNSQMILNFCQVANHKGETIGKLIESCLLEWGIDKVFSITVDNASSNDGAISYIMKDLEVGKP

Homology

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BLAST of MELO3C030184.2.1 vs. NCBI nr
Match: XP_022874249.1 (zinc finger BED domain-containing protein RICESLEEPER 4-like [Olea europaea var. sylvestris])

HSP 1 Score: 211.1 bits (536), Expect = 5.9e-51
Identity = 120/294 (40.82%), Postives = 157/294 (53.40%), Query Frame = 0


Query: 75  METSSGQHSETSPSXXXXXXXXXXXXXXXVSSSKPPLPDKKK----VRATKKTTSTVWDH 134
           M  S+G  S+T+ +                +  +P LP +       R + +  S VWDH
Sbjct: 1   MNPSAGSFSQTTATDMDEREEHGIETPSNDTDLQPSLPPRAPSTLGKRKSSRLASYVWDH 60

Query: 135 FTKL---EENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKKYPYKEVEVGQTILTL 194
           FT L   ++   RC CNYC+ +Y C T  CGTSTL  HL NQCKKYP + V+  Q IL+ 
Sbjct: 61  FTLLGSRDDPDVRCKCNYCEVDYACGTKKCGTSTLSNHLTNQCKKYPGRLVDKKQKILSF 120

Query: 195 Q-QLCXXXXXXXXXXXXXXXXXXXCAKMIIVDELPFKFIENEGFRNFCRVACPKFDPPSR 254
           + +                     CAKM+++DELPF+F+E  GFR FC VACP+F  PSR
Sbjct: 121 ETKKEGSGSNLVAVGQSKEECRVACAKMVVLDELPFRFVEGRGFRFFCSVACPQFRAPSR 180

Query: 255 FTIAKDIYQLYLDEKKKLKSFLVCNSQ--------------------------------- 314
            T+ +DIYQLYLDEK KL+     + Q                                 
Sbjct: 181 RTLMRDIYQLYLDEKLKLRDIFSFHRQRVSLTTDTWTSIQNVNYMSLTAHFIDSDWTLNK 240

Query: 315 MILNFCQVANHKGETIGKLIESCLLEWGIDKVFSITVDNASSNDGAISYIMKDL 328
            IL+FC V NHKGETIGK+IE+CL +WGI+KVF+ITVDNASSND  I+Y+ + L
Sbjct: 241 RILSFCVVPNHKGETIGKMIETCLQDWGIEKVFTITVDNASSNDVDIAYLRRKL 294

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BLAST of MELO3C030184.2.1 vs. NCBI nr
Match: XP_015884588.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Ziziphus jujuba])

HSP 1 Score: 202.6 bits (514), Expect = 2.1e-48
Identity = 116/260 (44.62%), Postives = 141/260 (54.23%), Query Frame = 0


Query: 105 SSSKPPLPDKKKVRATKKTTSTVWDHFTKLEE---NSSRCTCNYCDKEYCCDTTSCGTST 164
           +S +P  P     R   +  S VWDH+ K+E    ++ RC C Y   +Y C+ +  GTST
Sbjct: 20  TSLRPLPPSSLGKRKPSRKPSMVWDHYEKMENSDPDNPRCKCKYYGVDYACN-SKYGTST 79

Query: 165 LWKHLKNQCKKYPYKEVEVGQTILTL-QQLCXXXXXXXXXXXXXXXXXXXCAKMIIVDEL 224
           L  HL + CKKYPY+  +  Q  LT   Q                     CAKMII+DEL
Sbjct: 80  LLNHLNHHCKKYPYRVQDKKQKTLTFGAQNESDGSNLLAVGFNKEACRLACAKMIILDEL 139

Query: 225 PFKFIENEGFRNFCRVACPKFDPPSRFTIAKDIYQLYLDEKKKLKSFLVCNSQ------- 284
           PF F+E  GFR FC VACPKFDPPSR TI +DIY LYLDEK +LK+    N Q       
Sbjct: 140 PFSFVEGRGFRMFCNVACPKFDPPSRRTIVRDIYALYLDEKLQLKNTFSLNCQRISLTTD 199

Query: 285 --------------------------MILNFCQVANHKGETIGKLIESCLLEWGIDKVFS 328
                                      ILNFC + NHKGETIGKLI +CL EWGI+KVF+
Sbjct: 200 TWTSIQNINYMSLTAHYIDSNWMLHKRILNFCVIPNHKGETIGKLIGNCLYEWGIEKVFT 259

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BLAST of MELO3C030184.2.1 vs. NCBI nr
Match: XP_024923790.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Ziziphus jujuba])

HSP 1 Score: 194.5 bits (493), Expect = 5.7e-46
Identity = 115/261 (44.06%), Postives = 141/261 (54.02%), Query Frame = 0


Query: 105 SSSKPPLPDKK-KVRATKKTTSTVWDHFTKLEE---NSSRCTCNYCDKEYCCDTTSCGTS 164
           S+S  PLP      R   +  S VWDH+ K+E    ++ RC C YC  +Y C+ +  GT+
Sbjct: 19  SASLLPLPPSSLGKRKPSRKPSMVWDHYEKIENSDPDNPRCKCKYCGVDYACN-SKYGTN 78

Query: 165 TLWKHLKNQCKKYPYKEVEVGQTILTL-QQLCXXXXXXXXXXXXXXXXXXXCAKMIIVDE 224
           TL  HL + CKKY Y+  +  Q ILT   Q                     CAKMII+D+
Sbjct: 79  TLLNHLNHHCKKYIYRVQDKKQKILTFGAQNESDGSNLFAVGFNKEACRLACAKMIILDK 138

Query: 225 LPFKFIENEGFRNFCRVACPKFDPPSRFTIAKDIYQLYLDEKKKLKSFLVCNSQ------ 284
           LPF F+E  GFR F  VACPKFDPPSR TI KDIY LYLDEK +LK+    N Q      
Sbjct: 139 LPFSFVEGHGFRMFFNVACPKFDPPSRRTIVKDIYALYLDEKLQLKNTFSLNCQRISLTT 198

Query: 285 ---------------------------MILNFCQVANHKGETIGKLIESCLLEWGIDKVF 328
                                       ILNFC + NHKGETIGK I +CL EWGI++VF
Sbjct: 199 DTWTSIQNINYMSLTAHYIDSNWMLHKRILNFCVIPNHKGETIGKPIGNCLYEWGIERVF 258

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BLAST of MELO3C030184.2.1 vs. NCBI nr
Match: XP_024041351.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Citrus clementina])

HSP 1 Score: 193.0 bits (489), Expect = 1.7e-45
Identity = 106/237 (44.73%), Postives = 130/237 (54.85%), Query Frame = 0


Query: 125 STVWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKKYPYKEVEVGQTI 184
           S VW+H+TKL EN ++C CNYC K Y   +   GT TLW HL   C  Y  ++V++ Q  
Sbjct: 140 SKVWEHYTKL-ENDTKCKCNYCSKVYAYHSRFIGTRTLWNHLA-ACTAYADRKVDLKQKT 199

Query: 185 LTLQ-QLCXXXXXXXXXXXXXXXXXXXCAKMIIVDELPFKFIENEGFRNFCRVACPKFDP 244
           L  +                       C +MII+DELPF F+E EGFR F   ACPK D 
Sbjct: 200 LVFEDNTTGGGSNLVAISCSKEDIRKACIEMIIIDELPFSFVEKEGFRKFMSKACPKLDR 259

Query: 245 PSRFTIAKDIYQLYLDEKKKLKSFLVCNS------------------------------- 304
            SR T+A+D+YQLYL+EK  LK     N                                
Sbjct: 260 FSRRTVARDVYQLYLNEKNNLKKVFARNKYRVCITTDCWTSIQNLNYMVITAHFIDDEWQ 319

Query: 305 --QMILNFCQVANHKGETIGKLIESCLLEWGIDKVFSITVDNASSNDGAISYIMKDL 328
             + ILNFCQ+ +HKG+TIGKLIESCLLEWGID+VF+ITVDNASSND  ISY+ K L
Sbjct: 320 LHKRILNFCQIDDHKGDTIGKLIESCLLEWGIDRVFTITVDNASSNDLVISYLKKKL 374

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BLAST of MELO3C030184.2.1 vs. NCBI nr
Match: XP_024035612.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Citrus clementina])

HSP 1 Score: 193.0 bits (489), Expect = 1.7e-45
Identity = 106/237 (44.73%), Postives = 130/237 (54.85%), Query Frame = 0


Query: 125 STVWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKKYPYKEVEVGQTI 184
           S VW+H+TKL EN ++C CNYC K Y   +   GT TLW HL   C  Y  ++V++ Q  
Sbjct: 40  SKVWEHYTKL-ENDTKCKCNYCSKVYAYHSRFIGTRTLWNHLA-ACTAYADRKVDLKQKT 99

Query: 185 LTLQ-QLCXXXXXXXXXXXXXXXXXXXCAKMIIVDELPFKFIENEGFRNFCRVACPKFDP 244
           L  +                       C +MII+DELPF F+E EGFR F   ACPK D 
Sbjct: 100 LVFEDNTTGGGSNLVAISCSKEDIRKACIEMIIIDELPFSFVEKEGFRKFMSKACPKLDR 159

Query: 245 PSRFTIAKDIYQLYLDEKKKLKSFLVCNS------------------------------- 304
            SR T+A+D+YQLYL+EK  LK     N                                
Sbjct: 160 FSRRTVARDVYQLYLNEKNNLKKVFARNKYRVCITTDCWTSIQNLNYMVITAHFIDDEWQ 219

Query: 305 --QMILNFCQVANHKGETIGKLIESCLLEWGIDKVFSITVDNASSNDGAISYIMKDL 328
             + ILNFCQ+ +HKG+TIGKLIESCLLEWGID+VF+ITVDNASSND  ISY+ K L
Sbjct: 220 LHKRILNFCQIDDHKGDTIGKLIESCLLEWGIDRVFTITVDNASSNDLVISYLKKKL 274

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BLAST of MELO3C030184.2.1 vs. Swiss-Prot
Match: sp|P08770|TRA1_MAIZE (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 2.6e-10
Identity = 68/264 (25.76%), Postives = 105/264 (39.77%), Query Frame = 0


Query: 118 RATKKTTSTVWDHFTKLEENSSRCTCNYCDKEYCCDTTSC----------GTSTLWKHLK 177
           +  KK TS VW HFTK E         Y      C+  +C          GTS    HL+
Sbjct: 134 KRAKKCTSDVWQHFTKKEIEVEVDGKKYVQVWGHCNFPNCKAKYRAEGHHGTSGFRNHLR 193

Query: 178 NQ--------CKKYPYKEVEVGQTILTLQQLCXXXXXXXXXXXXXXXXXXXCAKMIIVDE 237
                     C K    E + G+ I  ++                          II+ E
Sbjct: 194 TSHSLVKGQLCLK---SEKDHGKDINLIE----------PYKYDEVVSLKKLHLAIIMHE 253

Query: 238 LPFKFIENEGFRNFCRVACPKFDPPSRFTIAKDIYQLYLDEKKKL--------------- 297
            PF  +E+E F  F +   P F   SR T  K I  LYL+EK+KL               
Sbjct: 254 YPFNIVEHEYFVEFVKSLRPHFPIKSRVTARKYIMDLYLEEKEKLYGKLKDVQSRFSTTM 313

Query: 298 --------KSFLV----------CNSQMILNFCQV-ANHKGETIGKLIESCLLEWGID-K 329
                   KS++           C  + I+ F  V   H G+ + +   + +++W I+ K
Sbjct: 314 DMWTSCQNKSYMCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQTFTAIMVKWNIEKK 373

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BLAST of MELO3C030184.2.1 vs. Swiss-Prot
Match: sp|P03010|TRAC9_MAIZE (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.6e-10
Identity = 68/264 (25.76%), Postives = 105/264 (39.77%), Query Frame = 0


Query: 118 RATKKTTSTVWDHFTKLEENSSRCTCNYCDKEYCCDTTSC----------GTSTLWKHLK 177
           +  KK TS VW HFTK E         Y      C+  +C          GTS    HL+
Sbjct: 79  KRAKKCTSDVWQHFTKKEIEVEVDGKKYVQVWGHCNFPNCKAKYRAEGHHGTSGFRNHLR 138

Query: 178 NQ--------CKKYPYKEVEVGQTILTLQQLCXXXXXXXXXXXXXXXXXXXCAKMIIVDE 237
                     C K    E + G+ I  ++                          II+ E
Sbjct: 139 TSHSLVKGQLCLK---SEKDHGKDINLIE----------PYKYDEVVSLKKLHLAIIMHE 198

Query: 238 LPFKFIENEGFRNFCRVACPKFDPPSRFTIAKDIYQLYLDEKKKL--------------- 297
            PF  +E+E F  F +   P F   SR T  K I  LYL+EK+KL               
Sbjct: 199 YPFNIVEHEYFVEFVKSLRPHFPIKSRVTARKYIMDLYLEEKEKLYGKLKDVQSRFSTTM 258

Query: 298 --------KSFLV----------CNSQMILNFCQV-ANHKGETIGKLIESCLLEWGID-K 329
                   KS++           C  + I+ F  V   H G+ + +   + +++W I+ K
Sbjct: 259 DMWTSCQNKSYMCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQTFTAIMVKWNIEKK 318

[Close]

BLAST of MELO3C030184.2.1 vs. Swiss-Prot
Match: sp|B9FJG3|RSLE1_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 5.7e-05
Identity = 57/258 (22.09%), Postives = 100/258 (38.76%), Query Frame = 0


Query: 121 KKTTSTVWDHFT--KLEENSSRCTCNYCDKEYCCDTTS--CGTSTLWKHLK-NQCKKYPY 180
           ++  S VW+HFT   +   ++R  C  C + +   + S   GTS L +H+    C K   
Sbjct: 65  RRKKSLVWEHFTIEAVSGGATRACCKLCKQTFAYSSGSKIAGTSHLKRHITLGSCPKIKN 124

Query: 181 KEVEVGQTIL---------TLQQLCXXXXXXXXXXXXXXXXXXXC---AKMIIVDELPFK 240
           +E ++  T           T+++                     C   AKMII+ + P  
Sbjct: 125 QEHKLLLTPAGGTDNDGEGTVERPSKRRYRYTGYANAAFDQERSCSYLAKMIILHDYPLH 184

Query: 241 FIENEGFRNFCRVACPKFDPPSRFTIAKDIYQLYLDEKKKLK------------------ 300
            ++   F  F     P+F      T+  ++Y +Y  EK+ L                   
Sbjct: 185 IVQQPAFTTFIDSLQPRFRVVDVETMEWEVYAVYQKEKENLMQAFNTMPGRISLAIGLWT 244

Query: 301 ------------SFLVCNSQM---ILNFCQVAN-HKGETIGKLIESCLLEWGI-DKVFSI 327
                        F+    +M   +LNF  V++ H    + + I + L +W + DK+F+I
Sbjct: 245 TSQTLGYVSLAGQFIDSEWKMHRRMLNFMMVSSPHSENALSEAISTSLSDWNMKDKLFTI 304

[Close]

BLAST of MELO3C030184.2.1 vs. Swiss-Prot
Match: sp|Q6AVI0|RSLE2_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.3e-04
Identity = 56/258 (21.71%), Postives = 98/258 (37.98%), Query Frame = 0


Query: 121 KKTTSTVWDHFT--KLEENSSRCTCNYCDKEYCCDTTS--CGTSTLWKHLK-NQCKKYPY 180
           ++  S VW+HFT   +   ++R  C  C + +   + S   GTS L +H+    C     
Sbjct: 65  RRKKSLVWEHFTIEAVSGGATRACCKLCKQTFAYSSGSKIAGTSHLKRHITLGSCPIIKN 124

Query: 181 KEVEVGQTIL---------TLQQLCXXXXXXXXXXXXXXXXXXXC---AKMIIVDELPFK 240
           +E ++  T           T+++                     C   AKMII+ + P  
Sbjct: 125 QEHKLALTPAVGTDNDGEGTVERPSKRRYRYTGYANAAFDQDRSCSYLAKMIILHDYPLH 184

Query: 241 FIENEGFRNFCRVACPKFDPPSRFTIAKDIYQLYLDEKKKLK------------------ 300
            ++   F  F     P+F      T+  ++Y +Y  EK+ L                   
Sbjct: 185 IVQQPAFTTFIDSLQPRFRVVDVETMEGEVYAVYQKEKENLMQAFSTMPGRISLTIGLWT 244

Query: 301 -----SFLVCNSQMI----------LNFCQVAN-HKGETIGKLIESCLLEWGI-DKVFSI 327
                 ++    Q I          LNF  V++ H    + + I + L +W + DK+F+I
Sbjct: 245 TSQTLGYVSLAGQFIDSEWKIHRRMLNFMMVSSPHSENALSEAISTSLSDWNMKDKLFTI 304

[Close]

BLAST of MELO3C030184.2.1 vs. TrEMBL
Match: tr|A0A1U8NPQ7|A0A1U8NPQ7_GOSHI (zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Gossypium hirsutum OX=3635 GN=LOC107950610 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.7e-44
Identity = 102/238 (42.86%), Postives = 135/238 (56.72%), Query Frame = 0


Query: 125 STVWDHFTKL--EENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKKYPYKEVEV-- 184
           S VW HFTK    E +S+  CNYC+KE+CCD    GT +L  H+   CKK P   V+   
Sbjct: 45  SEVWSHFTKFINSEGASKAKCNYCEKEFCCDMKKNGTGSLKYHI-GSCKKNPSNVVDTSQ 104

Query: 185 GQTILTLQQLCXXXXXXXXXXXXXXXXXXXCAKMIIVDELPFKFIENEGFRNFCRVACPK 244
           GQ +L  + +                     A+MI++DELPFKF+E+EGF+ F  VACP+
Sbjct: 105 GQLVLPRKGVEGGEGNISTWRFDQEACRKGLAQMILIDELPFKFVESEGFKKFMFVACPR 164

Query: 245 FDPPSRFTIAKDIYQLYLDEKKKLKSFL------VC------------------------ 304
           F  PSR T+ +D+YQLYLDE+ K+K  L      VC                        
Sbjct: 165 FHIPSRTTMTRDVYQLYLDERVKIKQLLRSSCSRVCLTTDTWTSLQRVNYLCLTAHFIDN 224

Query: 305 ---NSQMILNFCQVANHKGETIGKLIESCLLEWGIDKVFSITVDNASSNDGAISYIMK 326
               ++ ILNFC +++HKGE+IG +IE CLL WGIDK+F++TVDNASSND AI Y+ K
Sbjct: 225 DWKLNKKILNFCPISSHKGESIGMVIEKCLLNWGIDKLFTVTVDNASSNDVAIGYLRK 281

[Close]

BLAST of MELO3C030184.2.1 vs. TrEMBL
Match: tr|A0A0D2NRW7|A0A0D2NRW7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G232100 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 6.0e-44
Identity = 102/238 (42.86%), Postives = 135/238 (56.72%), Query Frame = 0


Query: 125 STVWDHFTKL--EENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKKYPYKEVEV-- 184
           S VW HFTK    E +S+  CNYC+KE+CCD    GT +L  H+   CKK P   V+   
Sbjct: 44  SEVWSHFTKFINSEGASKAKCNYCEKEFCCDMKKNGTGSLKYHI-GSCKKNPSNVVDTSQ 103

Query: 185 GQTILTLQQLCXXXXXXXXXXXXXXXXXXXCAKMIIVDELPFKFIENEGFRNFCRVACPK 244
           GQ +L  + +                     A+MI++DELPFKF+E+EGF+ F  VACP+
Sbjct: 104 GQLVLPRKGVEGGEGNLSTWRFDQEACRKGLAQMILIDELPFKFVESEGFKKFMFVACPR 163

Query: 245 FDPPSRFTIAKDIYQLYLDEKKKLKSFL------VC------------------------ 304
           F  PSR T+ +D+YQLYLDE+ K+K  L      VC                        
Sbjct: 164 FHIPSRTTMTRDVYQLYLDERVKIKKLLRSSCSRVCLTIDTWTSLQRVNYLCITAHFIDN 223

Query: 305 ---NSQMILNFCQVANHKGETIGKLIESCLLEWGIDKVFSITVDNASSNDGAISYIMK 326
               ++ ILNFC ++++KGE+IG LIE CLL WGIDK+F++TVDNASSND AI Y+ K
Sbjct: 224 DWKLNKKILNFCPISSYKGESIGMLIEKCLLNWGIDKLFTVTVDNASSNDVAIGYLRK 280

[Close]

BLAST of MELO3C030184.2.1 vs. TrEMBL
Match: tr|A0A0D2PR17|A0A0D2PR17_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G104500 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.7e-43
Identity = 102/238 (42.86%), Postives = 133/238 (55.88%), Query Frame = 0


Query: 125 STVWDHFTKL--EENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKKYPYKEVEV-- 184
           S VW HFTK    E  S+  CNYC+KE+CCD    GT +L  H+   CKK P   V+   
Sbjct: 45  SEVWSHFTKFINSEGVSKAKCNYCEKEFCCDMKKNGTGSLKYHI-GSCKKNPSNVVDTSQ 104

Query: 185 GQTILTLQQLCXXXXXXXXXXXXXXXXXXXCAKMIIVDELPFKFIENEGFRNFCRVACPK 244
           GQ +L  + +                     A+MI++DELPFKF+E+EGF+ F  VACP+
Sbjct: 105 GQLVLPRKGVEGGEGNLSTWRFDQEACRKGLAQMILIDELPFKFVESEGFKKFMFVACPR 164

Query: 245 FDPPSRFTIAKDIYQLYLDEKKKLKSFL------VC------------------------ 304
           F  PSR T+ +D YQLYLDE+ K+K  L      VC                        
Sbjct: 165 FHIPSRTTMTRDAYQLYLDERVKIKQLLRSSCSRVCLTTDTWTSLQRVNYLCITAHFIDN 224

Query: 305 ---NSQMILNFCQVANHKGETIGKLIESCLLEWGIDKVFSITVDNASSNDGAISYIMK 326
               ++ ILNFC +++HKGE+IG +IE CLL WGIDK+F++TVDNASSND AI Y+ K
Sbjct: 225 DWKLNKKILNFCPISSHKGESIGMVIEKCLLNWGIDKLFTVTVDNASSNDVAIGYLRK 281

[Close]

BLAST of MELO3C030184.2.1 vs. TrEMBL
Match: tr|A0A1U8HS18|A0A1U8HS18_GOSHI (zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Gossypium hirsutum OX=3635 GN=LOC107889036 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 4.3e-42
Identity = 101/239 (42.26%), Postives = 131/239 (54.81%), Query Frame = 0


Query: 125 STVWDHFTKL--EENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKKYPYKEVEVGQ 184
           S VW HFTK+   E +S+  CNYC KE+CCD    GT +L  H+   CKK P   V+  Q
Sbjct: 45  SEVWSHFTKIINSEGASKAKCNYCQKEFCCDVKKNGTGSLKYHI-GSCKKNPSNVVDPSQ 104

Query: 185 TILTLQQLCXXXXXXXXXXXXXXXXXXXCAK---MIIVDELPFKFIENEGFRNFCRVACP 244
             L L +                     C K    +++DELPFKF E+EGF+ F  VACP
Sbjct: 105 GQLVLPR--KGVEEGEGHLSTWRFDQEACRKGLAQMVIDELPFKFAESEGFKKFMFVACP 164

Query: 245 KFDPPSRFTIAKDIYQLYLDEKKKLKSFL------VC----------------------- 304
           +F  PSR T+ +D+YQLYLDE+ K+K  L      VC                       
Sbjct: 165 RFHIPSRTTMTRDVYQLYLDERVKIKQLLRSSCSRVCLTTDTWTSLQRVNYLCITAHFID 224

Query: 305 ----NSQMILNFCQVANHKGETIGKLIESCLLEWGIDKVFSITVDNASSNDGAISYIMK 326
                ++ ILNFC +++HKGE+IG +IE CLL WGIDK+F++TVDNASSND AI Y+ K
Sbjct: 225 NDWKLNKKILNFCPISSHKGESIGMVIEKCLLNWGIDKLFTVTVDNASSNDVAIGYLRK 280

[Close]

BLAST of MELO3C030184.2.1 vs. TrEMBL
Match: tr|A0A2K1X2H9|A0A2K1X2H9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G031200v3 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 4.3e-42
Identity = 103/250 (41.20%), Postives = 136/250 (54.40%), Query Frame = 0


Query: 118 RATKKTTSTVWDHFTKLEENSS--RCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKKYPY 177
           R  K+ TS +WDHF KL+ N+   R  C YC K+Y C T   GTS +W HL   CKK+P+
Sbjct: 45  RCNKRKTSQIWDHFKKLDGNAKTPRAACKYCGKDYVCHTILNGTSNMWSHL-GVCKKFPF 104

Query: 178 KEVEVGQTILTLQQLC---------XXXXXXXXXXXXXXXXXXXCAKMIIVDELPFKFIE 237
             ++  Q  L L+                                 KM+I+DELPF FIE
Sbjct: 105 -VIDRKQKTLVLEPKPKIEGGDNGEENLVTVKAVGYNYEECRKALGKMVILDELPFNFIE 164

Query: 238 NEGFRNFCRVACPKFDPPSRFTIAKDIYQLYLDEKKKLKSFL------------------ 297
           N+GF++FC+V  P+FD PSR TI +D  ++YL EK+KLK  L                  
Sbjct: 165 NQGFKSFCKVMQPRFDVPSRLTIWRDCLKIYLVEKEKLKKALKDQCLCLTTDTWTSIQNI 224

Query: 298 --VC-----------NSQMILNFCQVANHKGETIGKLIESCLLEWGIDKVFSITVDNASS 326
             +C            ++ ILNFCQV+NHKGETIG+ IESCLLEWGIDK+ ++TVDNAS 
Sbjct: 225 NYMCWTAHWIDEGWNLNKRILNFCQVSNHKGETIGQAIESCLLEWGIDKILTVTVDNASL 284

The following BLAST results are available for this feature:

BLAST of MELO3C030184.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022874249.1	5.9e-51	40.82	zinc finger BED domain-containing protein RICESLEEPER 4-like [Olea europaea var....	[more]
XP_015884588.1	2.1e-48	44.62	zinc finger BED domain-containing protein RICESLEEPER 2-like [Ziziphus jujuba]	[more]
XP_024923790.1	5.7e-46	44.06	zinc finger BED domain-containing protein RICESLEEPER 2-like [Ziziphus jujuba]	[more]
XP_024041351.1	1.7e-45	44.73	zinc finger BED domain-containing protein RICESLEEPER 2-like [Citrus clementina]	[more]
XP_024035612.1	1.7e-45	44.73	zinc finger BED domain-containing protein RICESLEEPER 2-like [Citrus clementina]	[more]

BLAST of MELO3C030184.2.1 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C030184.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P08770\|TRA1_MAIZE	2.6e-10	25.76	Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2	[more]
sp\|P03010\|TRAC9_MAIZE	2.6e-10	25.76	Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1	[more]
sp\|B9FJG3\|RSLE1_ORYSJ	5.7e-05	22.09	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]
sp\|Q6AVI0\|RSLE2_ORYSJ	1.3e-04	21.71	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]

BLAST of MELO3C030184.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1U8NPQ7\|A0A1U8NPQ7_GOSHI	2.7e-44	42.86	zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Gossypium hirsut...	[more]
tr\|A0A0D2NRW7\|A0A0D2NRW7_GOSRA	6.0e-44	42.86	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G232100 PE=4 ...	[more]
tr\|A0A0D2PR17\|A0A0D2PR17_GOSRA	1.7e-43	42.86	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G104500 PE=4 ...	[more]
tr\|A0A1U8HS18\|A0A1U8HS18_GOSHI	4.3e-42	42.26	zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Gossypium hirsut...	[more]
tr\|A0A2K1X2H9\|A0A2K1X2H9_POPTR	4.3e-42	41.20	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G031200v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR037220	BED_dom
IPR036236	Znf_C2H2_sf
IPR003656	Znf_BED

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C030184.2	MELO3C030184.2	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C030184.2.1	MELO3C030184.2.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C030184.2.1.CDS.1	MELO3C030184.2.1.CDS.1	CDS
MELO3C030184.2.1.CDS.2	MELO3C030184.2.1.CDS.2	CDS
MELO3C030184.2.1.CDS.3	MELO3C030184.2.1.CDS.3	CDS
MELO3C030184.2.1.CDS.4	MELO3C030184.2.1.CDS.4	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C030184.2.1.exon.1	MELO3C030184.2.1.exon.1	exon
MELO3C030184.2.1.exon.2	MELO3C030184.2.1.exon.2	exon
MELO3C030184.2.1.exon.3	MELO3C030184.2.1.exon.3	exon
MELO3C030184.2.1.exon.4	MELO3C030184.2.1.exon.4	exon

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003656	Zinc finger, BED-type	SMART	SM00614	bed5	coord: 122..173 e-value: 6.3E-15 score: 65.6
IPR003656	Zinc finger, BED-type	PFAM	PF02892	zf-BED	coord: 125..171 e-value: 2.3E-7 score: 30.6
IPR003656	Zinc finger, BED-type	PROSITE	PS50808	ZF_BED	coord: 122..177 score: 11.374
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..119
None	No IPR available	PANTHER	PTHR23272:SF54	SUBFAMILY NOT NAMED	coord: 101..328
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 101..328
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	SSF57667	beta-beta-alpha zinc fingers	coord: 125..175
IPR037220	Zinc finger BED domain	SUPERFAMILY	SSF140996	Hermes dimerisation domain	coord: 202..263