MELO3C029219.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTGAATTGTGAAATTACTTACGTACTCCATGTATTTTTTCTAATTTCTCATTTTCAGTATGTCAACCTCAAATCGTGCCCCGAGACATGTTTGGACGAAGGAGGAGGAAGGGACTCTTGTGGAATGTTTAATGAAGCTGGTGTCAATGGGGGGATAAAAATCAGATAATGGTACGTTCCGCCCAGGATATCTTGCGCAGTTGGTACGCATGATGGCGGAGAAACTACCTGGATGTCAGGTACGAGCAACAACTGTAATTGATTATAGGATCAAGACACTGAAGCAAACATTCCAGGCAATTGCCGAAATGCGGGACCCAGCGTGCAGTGGCTTTAGGTGGAACGATGAAGAGAAATGTATTGTTGCGGAGAAGGAATTATTTGATAATTGGGTTAAGGTATGGAATATAATTTAAATGTCACACAACGTTCACAATGTACATTTAGTTAACAATTTTTCAATCAGTACTCATACGTGATTTTTTTTCCCGCAGTCGCATCCTGCAGCGAAGGGACTCCTGAACAAACCATTTCTGTATTACGACGTACTTACATATGTCTTCGATCGCGATAGGGCGACCGATCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCTGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAATTGACCTCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGTGCTTCAGAGGGTAGGACCGGATCGAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCAAGACTTCGATGTTGAAGTGATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCGGAGTGGGCAGCACGCAACCTTGCAAATGACAACCATGTGCGCACAGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTATGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCCTGAGGATAAGAGGGAGGGATTTTGTAGAGTCCTCTTACGAGACATAGAGAGATAG GTTGAATTGTGAAATTACTTACGTACTCCATGTATTTTTTCTAATTTCTCATTTTCAGTATGTCAACCTCAAATCGTGCCCCGAGACATGTTTGGACGAAGGAGGAGGAAGGGACTCTTGTGGAATGTTTAATGAAGCTGGTGTCAATGGGGGGATAAAAATCAGATAATGGTACGTTCCGCCCAGGATATCTTGCGCAGTTGGTACGCATGATGGCGGAGAAACTACCTGGATGTCAGGTACGAGCAACAACTGTAATTGATTATAGGATCAAGACACTGAAGCAAACATTCCAGGCAATTGCCGAAATGCGGGACCCAGCGTGCAGTGGCTTTAGGTGGAACGATGAAGAGAAATGTATTGTTGCGGAGAAGGAATTATTTGATAATTGGGTTAAGTCGCATCCTGCAGCGAAGGGACTCCTGAACAAACCATTTCTGTATTACGACGTACTTACATATGTCTTCGATCGCGATAGGGCGACCGATCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCTGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAATTGACCTCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGTGCTTCAGAGGGTAGGACCGGATCGAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCAAGACTTCGATGTTGAAGTGATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCGGAGTGGGCAGCACGCAACCTTGCAAATGACAACCATGTGCGCACAGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTATGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCCTGAGGATAAGAGGGAGGGATTTTGTAGAGTCCTCTTACGAGACATAGAGAGATAG ATGATGGCGGAGAAACTACCTGGATGTCAGGTACGAGCAACAACTGTAATTGATTATAGGATCAAGACACTGAAGCAAACATTCCAGGCAATTGCCGAAATGCGGGACCCAGCGTGCAGTGGCTTTAGGTGGAACGATGAAGAGAAATGTATTGTTGCGGAGAAGGAATTATTTGATAATTGGGTTAAGTCGCATCCTGCAGCGAAGGGACTCCTGAACAAACCATTTCTGTATTACGACGTACTTACATATGTCTTCGATCGCGATAGGGCGACCGATCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCTGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAATTGACCTCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGTGCTTCAGAGGGTAGGACCGGATCGAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCAAGACTTCGATGTTGAAGTGATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCGGAGTGGGCAGCACGCAACCTTGCAAATGACAACCATGTGCGCACAGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTATGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCCTGAGGATAAGAGGGAGGGATTTTGTAGAGTCCTCTTACGAGACATAGAGAGATAG MMAEKLPGCQVRATTVIDYRIKTLKQTFQAIAEMRDPACSGFRWNDEEKCIVAEKELFDNWVKSHPAAKGLLNKPFLYYDVLTYVFDRDRATDRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQQDFDVEVIHLALDQTNEQLRQIAEWAARNLANDNHVRTEFFRILREMPELMSLDRALLQRHLLSRMDDLRGFVLMPEDKREGFCRVLLRDIER
BLAST of MELO3C029219.2.1 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 440.7 bits (1132), Expect = 3.5e-120 Identity = 221/256 (86.33%), Postives = 228/256 (89.06%), Query Frame = 0
BLAST of MELO3C029219.2.1 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]) HSP 1 Score: 236.5 bits (602), Expect = 1.0e-58 Identity = 121/255 (47.45%), Postives = 176/255 (69.02%), Query Frame = 0
BLAST of MELO3C029219.2.1 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 234.6 bits (597), Expect = 3.8e-58 Identity = 124/257 (48.25%), Postives = 171/257 (66.54%), Query Frame = 0
BLAST of MELO3C029219.2.1 vs. NCBI nr
Match: XP_008459131.1 (PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo]) HSP 1 Score: 183.0 bits (463), Expect = 1.3e-42 Identity = 103/190 (54.21%), Postives = 129/190 (67.89%), Query Frame = 0
BLAST of MELO3C029219.2.1 vs. NCBI nr
Match: XP_016899497.1 (PREDICTED: uncharacterized protein LOC107990554 [Cucumis melo]) HSP 1 Score: 179.5 bits (454), Expect = 1.5e-41 Identity = 86/103 (83.50%), Postives = 91/103 (88.35%), Query Frame = 0
BLAST of MELO3C029219.2.1 vs. TAIR10
Match: AT4G02210.1 (unknown protein) HSP 1 Score: 44.3 bits (103), Expect = 1.3e-04 Identity = 18/64 (28.12%), Postives = 37/64 (57.81%), Query Frame = 0
BLAST of MELO3C029219.2.1 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 2.3e-120 Identity = 221/256 (86.33%), Postives = 228/256 (89.06%), Query Frame = 0
BLAST of MELO3C029219.2.1 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 6.6e-59 Identity = 121/255 (47.45%), Postives = 176/255 (69.02%), Query Frame = 0
BLAST of MELO3C029219.2.1 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 2.5e-58 Identity = 124/257 (48.25%), Postives = 171/257 (66.54%), Query Frame = 0
BLAST of MELO3C029219.2.1 vs. TrEMBL
Match: tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME (uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 8.7e-43 Identity = 103/190 (54.21%), Postives = 129/190 (67.89%), Query Frame = 0
BLAST of MELO3C029219.2.1 vs. TrEMBL
Match: tr|A0A1S4DU21|A0A1S4DU21_CUCME (uncharacterized protein LOC107990554 OS=Cucumis melo OX=3656 GN=LOC107990554 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 9.6e-42 Identity = 86/103 (83.50%), Postives = 91/103 (88.35%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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