MELO3C028590.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATTCTTCTTCTTTTTCTTCTTCATCAAAAACTTTTGTTCCAACTTTTCTGTTCATAGTTACAGATATGGTTAGAGCTCCATTTTATGATAAAAATGGAATTAAAAAAGGTGCATGGAGTGCTGAAGAAGATGAAAAGCTCAGAGCTTATGTTCAAGAACATGGTCATTGTAATTGGCGAGAGCTTCCTAGATATGCTGGTAATTCGTTCATTAATTGATTCATTGCCAAAATACCCTTTGATTACAATATATTAATTGACAAATTACAGAACTAATAACCTATTTGAAAAAAAAAATGGCTCCTTTTACTTGGTTTTATTTCCAATTGCTTTAATAAAACCTTGTAGAGAGATGAATTATAACATAACTTACAAAGTTTTATGATCCCTTTTGAGTTCATATTTGATCTTCATCTTCTTTTCTCTCATGTTATTTTGTAAAATCGAAACACCCATTCCAAAGATTGCCCTCCTTTACCTAATTTCAATTTCAATTTCTTTAATTATATAAACGAGATGAACTGGATATCCCCCATTATTTAAGTTTAATTTTGATTTTCTTCATTCTTTGAAATTAATTATTTAGTAAAACCCCAAATAACCCACTTATAAAATAGCCCCTTTTACTTAACTTTTCTTTTCTTCAATTGCTTCAATAAAAACCTTATAGGATAGATGAATCTGATAGTTTCTTTTTAGGGTTTAATTTTGATTTTCTTCTTTCTTTGAAGTTAGTAGAAACAAAAACAACTCAACTGGAACCAAAGAGGGTTCCTTTAATTTTAGTATAGTTTAGGTTTAATAGAGAAATTAATAATTGAGAATATCACCTCAGTGTTCCATTCATATCTTCTTCTTTCCTATGAAGTTTATTTTGTAGAATCTCATTTCCAAAAGATGTCTTCTTTTTCTAATTAATTACTTTAATAAACCAAGTTATGCATATAACTTAACTACATATTCTTAATCATGTTCAATAATGCATATAATTAATTTAATCAAACAAATATTTTATTGAGATACTGAGATTTGGTTGTGATTTTTTTCATGATTAGGTTTGTTGAGGTGTGGCAAAAGTTGTCGACTGCGTTGGATCAATTACCTTCGTCCAGATGTGAAAAGAGGCAATTACTCGAAAGAAGAAGAACAATTAATCCTACAATTGCATCAACAATATGGAAACAAGTATGATTTTTCTTTCTAAGTATTAATTTCATCAAATATTAATATCACATGTTCTTATATATATATATATACATGCATCTCTGTTATGATATATCATTATCAATGTTACTTCTGATAATTAACTAGAGAGCTTTCCTTTAACCACTCCTTTATACATTTCTAGCATGCTATCAATGAATCATCATTTTTCAATAAAGAAAAAAAGAAAATACAATTCATTTCATATTTAAAAGAGCAATTAGAATTAAGGTTAGTATGTTTAGTATCCTTGGATTGAGTATATATGAGCTAATTTTGTTTAAATAATATATTCAAAGATTTCCGTGAAAATTGCAATTTTAGGTTAATTCGATTTGTCAATAGTTATGCTACCATAAAATGTTTTATGCGAAAAAATCTCTTATCTAGTTATTTTTATAATGGTTATGATTTATTTTCTCTTCAGATGGTCAATGATAGCTACAAAATTACCTGGACGAACGGATAACGAAATAAAGAATTATTGGCATACCCATTTAAAGAAGGTGAAAAGCAACAAGAATACAAAGAAGCATCAAAATGAGGAAATTTCCGGTAATAACAAATCCATCCAAAAACGAGAAACTACAATAATATCAGAAAACAAAACCAATTTGACAAATGAAATAATGCCATTGTCTCATCAGATATTTGAAAGCTCTCCAATTTCCACTTTGTCCTCTGAAATTTCCACAGTGACCTCAAATCAAGAATCCACACAAGATAGCCCTCCAACACCATTGTTCAAGTTTCAAGAAGAACCATATGATCATCATAACAATGGAGATCTTTGGGTTAATCCATTGTTTGTAGCTGAAAATTATTTGGAAGCTGAAAGTGATCAAAACCCAATCAACTTTGGTTTTATTGGAGGCTTCAATCAACCTTATGATTTTGAGTTACTTGATGAAAACTACTTGTTCTGTCAAGCAATGAAAGAATTGCCTGAAAATTATCAATCCCAATTGTATCCCTTCTGAAAAACAAAAAATATTGTATATGTATATAATATATATATATATATGAGTGATAAATGCTAGAACTTTGTTACATCAAATAACTATATGTCAGAGAGAGAGAGTTCATGTGTCAAATAATATACAGAAAGAGGGACATTCTTGCAAATAATACT TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATTCTTCTTCTTTTTCTTCTTCATCAAAAACTTTTGTTCCAACTTTTCTGTTCATAGTTACAGATATGGTTAGAGCTCCATTTTATGATAAAAATGGAATTAAAAAAGGTGCATGGAGTGCTGAAGAAGATGAAAAGCTCAGAGCTTATGTTCAAGAACATGGTCATTGTAATTGGCGAGAGCTTCCTAGATATGCTGTTAGTAGAAACAAAAACAACTCAACTGGAACCAAAGAGGGTTTGTTGAGGTGTGGCAAAAGTTGTCGACTGCGTTGGATCAATTACCTTCGTCCAGATGTGAAAAGAGGCAATTACTCGAAAGAAGAAGAACAATTAATCCTACAATTGCATCAACAATATGGAAACAAATGGTCAATGATAGCTACAAAATTACCTGGACGAACGGATAACGAAATAAAGAATTATTGGCATACCCATTTAAAGAAGGTGAAAAGCAACAAGAATACAAAGAAGCATCAAAATGAGGAAATTTCCGGTAATAACAAATCCATCCAAAAACGAGAAACTACAATAATATCAGAAAACAAAACCAATTTGACAAATGAAATAATGCCATTGTCTCATCAGATATTTGAAAGCTCTCCAATTTCCACTTTGTCCTCTGAAATTTCCACAGTGACCTCAAATCAAGAATCCACACAAGATAGCCCTCCAACACCATTGTTCAAGTTTCAAGAAGAACCATATGATCATCATAACAATGGAGATCTTTGGGTTAATCCATTGTTTGTAGCTGAAAATTATTTGGAAGCTGAAAGTGATCAAAACCCAATCAACTTTGGTTTTATTGGAGGCTTCAATCAACCTTATGATTTTGAGTTACTTGATGAAAACTACTTGTTCTGTCAAGCAATGAAAGAATTGCCTGAAAATTATCAATCCCAATTGTATCCCTTCTGAAAAACAAAAAATATTGTATATGTATATAATATATATATATATATGAGTGATAAATGCTAGAACTTTGTTACATCAAATAACTATATGTCAGAGAGAGAGAGTTCATGTGTCAAATAATATACAGAAAGAGGGACATTCTTGCAAATAATACT ATGGTTAGAGCTCCATTTTATGATAAAAATGGAATTAAAAAAGGTGCATGGAGTGCTGAAGAAGATGAAAAGCTCAGAGCTTATGTTCAAGAACATGGTCATTGTAATTGGCGAGAGCTTCCTAGATATGCTGTTAGTAGAAACAAAAACAACTCAACTGGAACCAAAGAGGGTTTGTTGAGGTGTGGCAAAAGTTGTCGACTGCGTTGGATCAATTACCTTCGTCCAGATGTGAAAAGAGGCAATTACTCGAAAGAAGAAGAACAATTAATCCTACAATTGCATCAACAATATGGAAACAAATGGTCAATGATAGCTACAAAATTACCTGGACGAACGGATAACGAAATAAAGAATTATTGGCATACCCATTTAAAGAAGGTGAAAAGCAACAAGAATACAAAGAAGCATCAAAATGAGGAAATTTCCGGTAATAACAAATCCATCCAAAAACGAGAAACTACAATAATATCAGAAAACAAAACCAATTTGACAAATGAAATAATGCCATTGTCTCATCAGATATTTGAAAGCTCTCCAATTTCCACTTTGTCCTCTGAAATTTCCACAGTGACCTCAAATCAAGAATCCACACAAGATAGCCCTCCAACACCATTGTTCAAGTTTCAAGAAGAACCATATGATCATCATAACAATGGAGATCTTTGGGTTAATCCATTGTTTGTAGCTGAAAATTATTTGGAAGCTGAAAGTGATCAAAACCCAATCAACTTTGGTTTTATTGGAGGCTTCAATCAACCTTATGATTTTGAGTTACTTGATGAAAACTACTTGTTCTGTCAAGCAATGAAAGAATTGCCTGAAAATTATCAATCCCAATTGTATCCCTTCTGA MVRAPFYDKNGIKKGAWSAEEDEKLRAYVQEHGHCNWRELPRYAVSRNKNNSTGTKEGLLRCGKSCRLRWINYLRPDVKRGNYSKEEEQLILQLHQQYGNKWSMIATKLPGRTDNEIKNYWHTHLKKVKSNKNTKKHQNEEISGNNKSIQKRETTIISENKTNLTNEIMPLSHQIFESSPISTLSSEISTVTSNQESTQDSPPTPLFKFQEEPYDHHNNGDLWVNPLFVAENYLEAESDQNPINFGFIGGFNQPYDFELLDENYLFCQAMKELPENYQSQLYPF
BLAST of MELO3C028590.2.1 vs. NCBI nr
Match: XP_008455365.1 (PREDICTED: transcription factor WER-like isoform X2 [Cucumis melo]) HSP 1 Score: 551.2 bits (1419), Expect = 2.0e-153 Identity = 271/284 (95.42%), Postives = 271/284 (95.42%), Query Frame = 0
BLAST of MELO3C028590.2.1 vs. NCBI nr
Match: XP_004137010.1 (PREDICTED: transcription repressor MYB6-like [Cucumis sativus]) HSP 1 Score: 470.3 bits (1209), Expect = 4.6e-129 Identity = 235/284 (82.75%), Postives = 239/284 (84.15%), Query Frame = 0
BLAST of MELO3C028590.2.1 vs. NCBI nr
Match: XP_022952680.1 (transcription factor MYB58-like [Cucurbita moschata]) HSP 1 Score: 322.8 bits (826), Expect = 1.2e-84 Identity = 183/283 (64.66%), Postives = 213/283 (75.27%), Query Frame = 0
BLAST of MELO3C028590.2.1 vs. NCBI nr
Match: XP_023554593.1 (transcription factor MYB4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 322.8 bits (826), Expect = 1.2e-84 Identity = 183/283 (64.66%), Postives = 212/283 (74.91%), Query Frame = 0
BLAST of MELO3C028590.2.1 vs. NCBI nr
Match: XP_022969236.1 (transcription factor MYB4-like [Cucurbita maxima]) HSP 1 Score: 313.2 bits (801), Expect = 9.4e-82 Identity = 181/284 (63.73%), Postives = 211/284 (74.30%), Query Frame = 0
BLAST of MELO3C028590.2.1 vs. TAIR10
Match: AT1G16490.1 (myb domain protein 58) HSP 1 Score: 169.9 bits (429), Expect = 2.3e-42 Identity = 85/153 (55.56%), Postives = 108/153 (70.59%), Query Frame = 0
BLAST of MELO3C028590.2.1 vs. TAIR10
Match: AT4G21440.1 (MYB-like 102) HSP 1 Score: 168.7 bits (426), Expect = 5.2e-42 Identity = 76/127 (59.84%), Postives = 95/127 (74.80%), Query Frame = 0
BLAST of MELO3C028590.2.1 vs. TAIR10
Match: AT2G31180.1 (myb domain protein 14) HSP 1 Score: 168.3 bits (425), Expect = 6.8e-42 Identity = 81/157 (51.59%), Postives = 107/157 (68.15%), Query Frame = 0
BLAST of MELO3C028590.2.1 vs. TAIR10
Match: AT3G01140.1 (myb domain protein 106) HSP 1 Score: 168.3 bits (425), Expect = 6.8e-42 Identity = 83/149 (55.70%), Postives = 103/149 (69.13%), Query Frame = 0
BLAST of MELO3C028590.2.1 vs. TAIR10
Match: AT5G16770.1 (myb domain protein 9) HSP 1 Score: 168.3 bits (425), Expect = 6.8e-42 Identity = 77/127 (60.63%), Postives = 94/127 (74.02%), Query Frame = 0
BLAST of MELO3C028590.2.1 vs. Swiss-Prot
Match: sp|Q7XBH4|MYB4_ORYSJ (Transcription factor MYB4 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB4 PE=2 SV=2) HSP 1 Score: 174.5 bits (441), Expect = 1.7e-42 Identity = 81/127 (63.78%), Postives = 94/127 (74.02%), Query Frame = 0
BLAST of MELO3C028590.2.1 vs. Swiss-Prot
Match: sp|Q6K1S6|MYB30_ORYSJ (Transcription factor MYB30 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB30 PE=1 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 8.4e-42 Identity = 79/127 (62.20%), Postives = 93/127 (73.23%), Query Frame = 0
BLAST of MELO3C028590.2.1 vs. Swiss-Prot
Match: sp|Q9SA47|MYB58_ARATH (Transcription factor MYB58 OS=Arabidopsis thaliana OX=3702 GN=MYB58 PE=2 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 4.2e-41 Identity = 85/153 (55.56%), Postives = 108/153 (70.59%), Query Frame = 0
BLAST of MELO3C028590.2.1 vs. Swiss-Prot
Match: sp|Q9LE63|MY106_ARATH (Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 7.1e-41 Identity = 84/149 (56.38%), Postives = 103/149 (69.13%), Query Frame = 0
BLAST of MELO3C028590.2.1 vs. Swiss-Prot
Match: sp|Q9LDR8|MY102_ARATH (Transcription factor MYB102 OS=Arabidopsis thaliana OX=3702 GN=MYB102 PE=2 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 9.3e-41 Identity = 76/127 (59.84%), Postives = 95/127 (74.80%), Query Frame = 0
BLAST of MELO3C028590.2.1 vs. TrEMBL
Match: tr|A0A1S3C0B0|A0A1S3C0B0_CUCME (transcription factor WER-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495551 PE=4 SV=1) HSP 1 Score: 551.2 bits (1419), Expect = 1.4e-153 Identity = 271/284 (95.42%), Postives = 271/284 (95.42%), Query Frame = 0
BLAST of MELO3C028590.2.1 vs. TrEMBL
Match: tr|A0A1S4E0E6|A0A1S4E0E6_CUCME (myb-related protein Myb4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495551 PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 7.9e-69 Identity = 130/143 (90.91%), Postives = 130/143 (90.91%), Query Frame = 0
BLAST of MELO3C028590.2.1 vs. TrEMBL
Match: tr|A0A067JXL7|A0A067JXL7_JATCU (MYB family protein OS=Jatropha curcas OX=180498 GN=JCGZ_26464 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 3.5e-53 Identity = 134/284 (47.18%), Postives = 160/284 (56.34%), Query Frame = 0
BLAST of MELO3C028590.2.1 vs. TrEMBL
Match: tr|A0A251Q488|A0A251Q488_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G227900 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 6.0e-53 Identity = 132/288 (45.83%), Postives = 170/288 (59.03%), Query Frame = 0
BLAST of MELO3C028590.2.1 vs. TrEMBL
Match: tr|A0A2N9IZQ9|A0A2N9IZQ9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57940 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 1.5e-51 Identity = 129/281 (45.91%), Postives = 167/281 (59.43%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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