MELO3C028580.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C028580.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	E3 ubiquitin-protein ligase
Location	chr01 : 1140152 .. 1140934 (+)
Sequence length	783

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCACAAATCTTTAATATTTGTAGGAATCGTCCCTTCGTCGGTATGTCACTAGAAATCAACGATTCCATCACGAGCATGAATCGAACACGAAAACGGATACGAACTCGACAAAACTCATCAAAATATGTCCAACACATCGACCTTAATTTCAAAGTCCAACTCAAATGCTCTCACTTTCTAGTATATGAAGATGGCATAACCACTACCACAAGTTTCCTTAATGAACACACATCTCGACCACATCCTTTAGCAACTTACAAACTTCCCATCTCCATCTTCAAGCATGGTGACAAAGCTTTGGAGCAATATCTTTTCCATAAGTTCCATGTCTATCGAGAATTCATCAACACAACACTCGTGGCTGATAGACTAATACAGCATTGGGTTAAAAGAGTCGAAGAAGATGATCATGAACACCAAGAGGAGAATAATAATCACGACTTTAATGTATTTCAAAAGATTTATCCTCTCGAAATTACATTAGAGATGCGGATCATTCAGAGGTATGTCGAAGAATCACCGATAATGATAATGGTTCCAACCAGTGACAGTGCTATAGAGAGTATGTTAAGAAGAGTGGAAAACGATTGGGATGACGAAGGAATTAATTGTGTAATTTGTTTGGAGGAAATAAGTAGTAAAGAGGAGGAAGAAAGTGAGAAATCAGTGTTGCAGATGCCATGTTTGCATATGTTTCATGGAGAATGTATAAATAAATGGTTGAAGACGAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTACAAATAATTGA

mRNA sequence

ATGGCAGCACAAATCTTTAATATTTGTAGGAATCGTCCCTTCGTCGGTATGTCACTAGAAATCAACGATTCCATCACGAGCATGAATCGAACACGAAAACGGATACGAACTCGACAAAACTCATCAAAATATGTCCAACACATCGACCTTAATTTCAAAGTCCAACTCAAATGCTCTCACTTTCTAGTATATGAAGATGGCATAACCACTACCACAAGTTTCCTTAATGAACACACATCTCGACCACATCCTTTAGCAACTTACAAACTTCCCATCTCCATCTTCAAGCATGGTGACAAAGCTTTGGAGCAATATCTTTTCCATAAGTTCCATGTCTATCGAGAATTCATCAACACAACACTCGTGGCTGATAGACTAATACAGCATTGGGTTAAAAGAGTCGAAGAAGATGATCATGAACACCAAGAGGAGAATAATAATCACGACTTTAATGTATTTCAAAAGATTTATCCTCTCGAAATTACATTAGAGATGCGGATCATTCAGAGGTATGTCGAAGAATCACCGATAATGATAATGGTTCCAACCAGTGACAGTGCTATAGAGAGTATGTTAAGAAGAGTGGAAAACGATTGGGATGACGAAGGAATTAATTGTGTAATTTGTTTGGAGGAAATAAGTAGTAAAGAGGAGGAAGAAAGTGAGAAATCAGTGTTGCAGATGCCATGTTTGCATATGTTTCATGGAGAATGTATAAATAAATGGTTGAAGACGAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTACAAATAATTGA

Coding sequence (CDS)

ATGGCAGCACAAATCTTTAATATTTGTAGGAATCGTCCCTTCGTCGGTATGTCACTAGAAATCAACGATTCCATCACGAGCATGAATCGAACACGAAAACGGATACGAACTCGACAAAACTCATCAAAATATGTCCAACACATCGACCTTAATTTCAAAGTCCAACTCAAATGCTCTCACTTTCTAGTATATGAAGATGGCATAACCACTACCACAAGTTTCCTTAATGAACACACATCTCGACCACATCCTTTAGCAACTTACAAACTTCCCATCTCCATCTTCAAGCATGGTGACAAAGCTTTGGAGCAATATCTTTTCCATAAGTTCCATGTCTATCGAGAATTCATCAACACAACACTCGTGGCTGATAGACTAATACAGCATTGGGTTAAAAGAGTCGAAGAAGATGATCATGAACACCAAGAGGAGAATAATAATCACGACTTTAATGTATTTCAAAAGATTTATCCTCTCGAAATTACATTAGAGATGCGGATCATTCAGAGGTATGTCGAAGAATCACCGATAATGATAATGGTTCCAACCAGTGACAGTGCTATAGAGAGTATGTTAAGAAGAGTGGAAAACGATTGGGATGACGAAGGAATTAATTGTGTAATTTGTTTGGAGGAAATAAGTAGTAAAGAGGAGGAAGAAAGTGAGAAATCAGTGTTGCAGATGCCATGTTTGCATATGTTTCATGGAGAATGTATAAATAAATGGTTGAAGACGAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTACAAATAATTGA

Protein sequence

MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSHFLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTTLVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRYVEESPIMIMVPTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMPTNN

Homology

[Close]

BLAST of MELO3C028580.2.1 vs. NCBI nr
Match: XP_011659722.1 (PREDICTED: uncharacterized protein LOC105436242 [Cucumis sativus] >KGN43806.1 hypothetical protein Csa_7G068590 [Cucumis sativus])

HSP 1 Score: 395.6 bits (1015), Expect = 1.3e-106
Identity = 201/268 (75.00%), Postives = 226/268 (84.33%), Query Frame = 0


Query: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
           MAAQIF++C NRPFVGMSL+I DSITS++RTRKRIRTR+NSSKYV+HIDLNFKVQL+C+H
Sbjct: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60

Query: 61  FL-VYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINT 120
            L  YEDGI TTTSFL+EHTS  HPLATY+LPISIFK+G+  LEQYL  + H +RE I+ 
Sbjct: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120

Query: 121 TLVADRLIQHWVKRVEEDDHXXXXXXXXHDFNVFQKIYPLEITLEMRIIQRYVEESPIMI 180
           TLVADR+IQHWVK+VEEDD          DFNVFQKI+ LEITLEM+I +RYV ESP+MI
Sbjct: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180

Query: 181 MVPTSDSAIESMLRRVEND------WDDEGINCVICLEEISS-KEEEESEKSVLQMPCLH 240
           MVPTSD AIESMLRRVEND       D+EGI C ICLEEISS KEEE SEKSVLQMPCLH
Sbjct: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240

Query: 241 MFHGECINKWLKTSHYCPTCRFSMPTNN 261
           MFH ECI+KWL+TSHYCPTCRFSMPTNN
Sbjct: 241 MFHEECIDKWLRTSHYCPTCRFSMPTNN 268

[Close]

BLAST of MELO3C028580.2.1 vs. NCBI nr
Match: KGN43805.1 (hypothetical protein Csa_7G068580 [Cucumis sativus])

HSP 1 Score: 269.6 bits (688), Expect = 1.1e-68
Identity = 150/267 (56.18%), Postives = 192/267 (71.91%), Query Frame = 0


Query: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
           MA +IF+ CR   ++GM L I D      R + +IRTR+NS  + + IDLNF+VQLKC H
Sbjct: 1   MAERIFDRCRCGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60

Query: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT 120
           F + E+  + TT+ ++EH    HP AT++LPISI +HGDK L+  LF +FH+YR+ IN  
Sbjct: 61  FQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIE 120

Query: 121 LVADRLIQHWVKRVEEDDHXXXXXXXXHDFNVFQKIYPLEITLEMRIIQ--RYVEESP-I 180
            + D +I++WV +VEE   XXXXXXXX    VF+KIY LEITLE+ I Q  R ++  P +
Sbjct: 121 HLVDEIIKYWVTKVEE---XXXXXXXXXSSRVFKKIYRLEITLELLIFQIVRVMDYQPQV 180

Query: 181 MIMVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESEKSVLQMPCLH 240
           ++MVPTSDSA+ESML+RVEN+      DD+ I+CVICLEEI  KEE+ SE  VLQMPCLH
Sbjct: 181 LMMVPTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEI-GKEEKGSEGVVLQMPCLH 240

Query: 241 MFHGECINKWLKTSHYCPTCRFSMPTN 260
           +FHGECINKWL TSHYCPTCRF MP N
Sbjct: 241 VFHGECINKWLNTSHYCPTCRFPMPIN 263

[Close]

BLAST of MELO3C028580.2.1 vs. NCBI nr
Match: KGN43801.1 (hypothetical protein Csa_7G067560 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 1.3e-66
Identity = 143/278 (51.44%), Postives = 188/278 (67.63%), Query Frame = 0


Query: 1   MAAQIFNICR--NRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKC 60
           MA QIF  CR  +  ++GMSL I D     ++ + +IRT  NS   V+ IDLNFKV++KC
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDP-DLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60

Query: 61  SHFLVYEDGITTT--TSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREF 120
            H+    +G  +T  T+ L+EH S  HPL T +LP+SIFKHGDK L++ LF +F +YR  
Sbjct: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120

Query: 121 INTTLVADRLIQHWVKRVEEDDHXXXXXXXXHDFNVFQKIYPLEITLEMRIIQ------- 180
           IN  LV D +I+HWVK+V+E++             VF++IYPLEIT+E+ + Q       
Sbjct: 121 INIELVVDEIIKHWVKKVDEENSTS---------QVFEEIYPLEITIELLVYQMIHAIDQ 180

Query: 181 --RYVEESPIMIMVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESE 240
               + + P ++MVPTS+SA+ESML++VEN+      D++ INCVICLEEI SKE++ SE
Sbjct: 181 PHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEI-SKEKKGSE 240

Query: 241 KSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMPTNN 261
             VLQMPCLHMFH ECI KWLK SHYCPTCRFSMPTNN
Sbjct: 241 AVVLQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]

BLAST of MELO3C028580.2.1 vs. NCBI nr
Match: KGN43800.1 (hypothetical protein Csa_7G067550 [Cucumis sativus])

HSP 1 Score: 254.6 bits (649), Expect = 3.6e-64
Identity = 139/273 (50.92%), Postives = 180/273 (65.93%), Query Frame = 0


Query: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
           MA Q F+ C +  ++GMSL I D           I+TR NS   V+ IDLNFKV++KC H
Sbjct: 1   MAEQNFDDCTSGYYMGMSLRITDP----------IQTRSNSPTSVKQIDLNFKVEVKCQH 60

Query: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT 120
           F   E+  T  T+FL+EH     P    +LP+SIFKHGDK L++ LF KF ++R  IN  
Sbjct: 61  FQAGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIE 120

Query: 121 LVADRLIQHWVKRVEEDDHXXXXXXXXHDFNVFQKIYPLEITLEMRIIQ--------RYV 180
           LV D++I+HWVK+VE+D          ++  VF++IYPLEIT+E+ ++Q        +  
Sbjct: 121 LVTDQIIKHWVKKVEDDKE--------NNSGVFEEIYPLEITIEVLVLQMIDAVDQPQET 180

Query: 181 EESPIMIMVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESEKSVLQ 240
            + P + MVPTSDSA++SML+RVEN+      D + I+CVICLE+I SKEE+ SE  VLQ
Sbjct: 181 IDQPQVRMVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKI-SKEEKGSEGVVLQ 240

Query: 241 MPCLHMFHGECINKWLKTSHYCPTCRFSMPTNN 261
           MPCLHMFH ECI KWLKTSHYCPTCRFSM  NN
Sbjct: 241 MPCLHMFHEECIRKWLKTSHYCPTCRFSMTINN 254

[Close]

BLAST of MELO3C028580.2.1 vs. NCBI nr
Match: ADN34252.1 (hypothetical zinc finger protein [Cucumis melo subsp. melo])

HSP 1 Score: 253.4 bits (646), Expect = 8.1e-64
Identity = 144/274 (52.55%), Postives = 186/274 (67.88%), Query Frame = 0


Query: 1   MAAQIFNICR--NRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKC 60
           MA +IFNICR  +  ++GMSL I D         +  +T  +S   V+ I L FKVQLKC
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQT--SSPTLVEQICLKFKVQLKC 60

Query: 61  SHFLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFIN 120
            HF V+E G   +T+ + EH    H  AT++LPISIFKHGDK L++ LF +F +Y + IN
Sbjct: 61  QHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIIN 120

Query: 121 TTLVADRLIQHWVKRVEEDDHXXXXXXXXHDFNV-FQKIYPLEITLEMRIIQ--RYVEES 180
             L+A+ +I+HWV++VEE++         ++ NV F+KIYPLEI + + + +  R V+  
Sbjct: 121 IELLANEIIKHWVRKVEEEE------DQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPR 180

Query: 181 PIMI----MVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESEKSVL 240
             MI    MVPTSDSA+ESML+RVEN+      DDE INCV+CLEEI SKEE+ SE +VL
Sbjct: 181 LAMIDQPLMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEI-SKEEKGSETTVL 240

Query: 241 QMPCLHMFHGECINKWLKTSHYCPTCRFSMPTNN 261
           QMPCLHMFH ECI KWLKTSHYCPTCRFSMP +N
Sbjct: 241 QMPCLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]

BLAST of MELO3C028580.2.1 vs. TAIR10
Match: AT5G08139.1 (RING/U-box superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 7.4e-11
Identity = 33/90 (36.67%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 174 ESPIMIMVPTSDSAIESM---LRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPC 233
           E  ++ + PTS S + ++   L   END DD G+ C +C      K+E       +Q+PC
Sbjct: 275 EVSVIGLPPTSKSFLNNLPVVLLEGEND-DDGGLVCAVC------KDEMNIGNKAVQLPC 334

Query: 234 LHMFHGECINKWLKTSHYCPTCRFSMPTNN 261
            H +H ECI  WLK  + CP CR+ +PT++
Sbjct: 335 NHKYHSECIVPWLKVRNTCPVCRYELPTDD 357

[Close]

BLAST of MELO3C028580.2.1 vs. TAIR10
Match: AT2G29840.1 (RING/U-box superfamily protein)

HSP 1 Score: 63.5 bits (153), Expect = 2.1e-10
Identity = 40/132 (30.30%), Postives = 59/132 (44.70%), Query Frame = 0


Query: 129 HWVKRVEEDDHXXXXXXXXHDFNVFQKIYPLEITLEMRIIQRYVEESPIMIMVPTSDSAI 188
           HW+ R E D           D    +  +P       +++Q    E+    + P S  A+
Sbjct: 178 HWLPRYEHD----------FDHQTEEAFHP----QFEQVLQASFNETNTARLKPASKLAV 237

Query: 189 ESMLRRVENDWDD---EGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECINKWLKT 248
           ES+ R+      D   E   C ICLEE       +  +S++ +PC H F  EC  KW +T
Sbjct: 238 ESLNRKTYKKASDVVGENEMCSICLEEF------DDGRSIVALPCGHEFDDECALKWFET 289

Query: 249 SHYCPTCRFSMP 258
           +H CP CRF +P
Sbjct: 298 NHDCPLCRFKLP 289

[Close]

BLAST of MELO3C028580.2.1 vs. TAIR10
Match: AT3G13228.1 (RING/U-box superfamily protein)

HSP 1 Score: 62.8 bits (151), Expect = 3.7e-10
Identity = 30/102 (29.41%), Postives = 54/102 (52.94%), Query Frame = 0


Query: 156 IYPLEITLEMRIIQRYVEESPIMIMVPTSDSAIESMLRRVENDWDDEGINCVICLEEISS 215
           ++P + T     +Q   +E+    + P S   ++S+ R++ +  +  G  C ICLEE + 
Sbjct: 225 LFPHDETDIEEAVQVSFDETTNFCLGPASKLVVKSLTRKIYDKINYTGERCTICLEEFN- 284

Query: 216 KEEEESEKSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMP 258
                +   ++ +PC H F  EC  KW +T+H+CP CR+ +P
Sbjct: 285 -----AGGILVALPCGHDFDDECAVKWFETNHFCPLCRYELP 320

[Close]

BLAST of MELO3C028580.2.1 vs. TAIR10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 62.0 bits (149), Expect = 6.2e-10
Identity = 31/79 (39.24%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 182 PTSDSAIESMLRRVENDWDDEG-INCVICLEEISSKEEEESEKSVLQMPCLHMFHGECIN 241
           P S SAIES+ R   +D   +   NC +C E   +  E        +MPC H+FHG+CI 
Sbjct: 190 PASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGR------EMPCKHIFHGDCIV 249

Query: 242 KWLKTSHYCPTCRFSMPTN 260
            WL   + CP CRF +P++
Sbjct: 250 PWLSIRNSCPVCRFELPSD 262

[Close]

BLAST of MELO3C028580.2.1 vs. TAIR10
Match: AT1G74620.1 (RING/U-box superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 8.2e-10
Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 0


Query: 206 CVICLEEISSKEEEESEKSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMP 258
           C IC+E+       E    V ++PC H FHG+CINKWL+ +H CP CR S+P
Sbjct: 183 CAICMEDYI-----EGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSIP 229

[Close]

BLAST of MELO3C028580.2.1 vs. Swiss-Prot
Match: sp|Q7ZW78|RN181_DANRE (E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 3.9e-09
Identity = 28/80 (35.00%), Postives = 47/80 (58.75%), Query Frame = 0


Query: 182 PTSDSAIESM-LRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECIN 241
           P + + ++S+ +  +  +  D+G+ C +CL E       E ++SV +MPC H+FH  CI 
Sbjct: 54  PAAKAVVQSLPVVIISPEQADKGVKCPVCLLEF------EEQESVREMPCKHLFHTGCIL 113

Query: 242 KWLKTSHYCPTCRFSMPTNN 261
            WL  ++ CP CR  +PT+N
Sbjct: 114 PWLNKTNSCPLCRLELPTDN 127

[Close]

BLAST of MELO3C028580.2.1 vs. Swiss-Prot
Match: sp|Q6AXU4|RN181_RAT (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.6e-09
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 182 PTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECINK 241
           P + + +ES+ R V      E + C +CL E       E E++V++MPC H+FH  CI  
Sbjct: 65  PAAKAVVESLPRTVIRSSKAE-LKCPVCLLEF------EEEETVIEMPCHHLFHSNCILP 124

Query: 242 WLKTSHYCPTCRFSMPTNN 261
           WL  ++ CP CR  +PT++
Sbjct: 125 WLSKTNSCPLCRHELPTDD 136

[Close]

BLAST of MELO3C028580.2.1 vs. Swiss-Prot
Match: sp|Q9SNB6|RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08
Identity = 31/79 (39.24%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 182 PTSDSAIESMLRRVENDWDDEG-INCVICLEEISSKEEEESEKSVLQMPCLHMFHGECIN 241
           P S SAIES+ R   +D   +   NC +C E   +  E        +MPC H+FHG+CI 
Sbjct: 190 PASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGR------EMPCKHIFHGDCIV 249

Query: 242 KWLKTSHYCPTCRFSMPTN 260
            WL   + CP CRF +P++
Sbjct: 250 PWLSIRNSCPVCRFELPSD 262

[Close]

BLAST of MELO3C028580.2.1 vs. Swiss-Prot
Match: sp|Q9CY62|RN181_MOUSE (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus OX=10090 GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08
Identity = 28/79 (35.44%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 182 PTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECINK 241
           P + + +ES+ R V +    + + C +CL E       E+E++V++MPC H+FH  CI  
Sbjct: 65  PAAKAVVESLPRTVISSAKAD-LKCPVCLLEF------EAEETVIEMPCHHLFHSNCILP 124

Query: 242 WLKTSHYCPTCRFSMPTNN 261
           WL  ++ CP CR  +PT++
Sbjct: 125 WLSKTNSCPLCRHELPTDD 136

[Close]

BLAST of MELO3C028580.2.1 vs. Swiss-Prot
Match: sp|Q9LQX2|MPSR1_ARATH (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-08
Identity = 44/106 (41.51%), Postives = 58/106 (54.72%), Query Frame = 0


Query: 154 QKIYPLEITLEMRIIQRYVEESPIMIMVPTSDSAIESMLRRVENDWDDEGINCVICLEEI 213
           Q +  LE +  M  + R + ES      P S ++I++M   VE D   EG  CVICL   
Sbjct: 64  QGMIVLEGSSGMNPLLRSLLESREEGRPPASKASIDAM-PIVEID-GCEG-ECVICL--- 123

Query: 214 SSKEEEESEKSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMPTN 260
              EE +SE++V +MPC H FHG CI KWL     CP CR+ MP +
Sbjct: 124 ---EEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]

BLAST of MELO3C028580.2.1 vs. TrEMBL
Match: tr|A0A0A0K7L5|A0A0A0K7L5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G068590 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 8.7e-107
Identity = 201/268 (75.00%), Postives = 226/268 (84.33%), Query Frame = 0


Query: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
           MAAQIF++C NRPFVGMSL+I DSITS++RTRKRIRTR+NSSKYV+HIDLNFKVQL+C+H
Sbjct: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60

Query: 61  FL-VYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINT 120
            L  YEDGI TTTSFL+EHTS  HPLATY+LPISIFK+G+  LEQYL  + H +RE I+ 
Sbjct: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120

Query: 121 TLVADRLIQHWVKRVEEDDHXXXXXXXXHDFNVFQKIYPLEITLEMRIIQRYVEESPIMI 180
           TLVADR+IQHWVK+VEEDD          DFNVFQKI+ LEITLEM+I +RYV ESP+MI
Sbjct: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180

Query: 181 MVPTSDSAIESMLRRVEND------WDDEGINCVICLEEISS-KEEEESEKSVLQMPCLH 240
           MVPTSD AIESMLRRVEND       D+EGI C ICLEEISS KEEE SEKSVLQMPCLH
Sbjct: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240

Query: 241 MFHGECINKWLKTSHYCPTCRFSMPTNN 261
           MFH ECI+KWL+TSHYCPTCRFSMPTNN
Sbjct: 241 MFHEECIDKWLRTSHYCPTCRFSMPTNN 268

[Close]

BLAST of MELO3C028580.2.1 vs. TrEMBL
Match: tr|A0A0A0K2A5|A0A0A0K2A5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G068580 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 7.2e-69
Identity = 150/267 (56.18%), Postives = 192/267 (71.91%), Query Frame = 0


Query: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
           MA +IF+ CR   ++GM L I D      R + +IRTR+NS  + + IDLNF+VQLKC H
Sbjct: 1   MAERIFDRCRCGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60

Query: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT 120
           F + E+  + TT+ ++EH    HP AT++LPISI +HGDK L+  LF +FH+YR+ IN  
Sbjct: 61  FQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIE 120

Query: 121 LVADRLIQHWVKRVEEDDHXXXXXXXXHDFNVFQKIYPLEITLEMRIIQ--RYVEESP-I 180
            + D +I++WV +VEE   XXXXXXXX    VF+KIY LEITLE+ I Q  R ++  P +
Sbjct: 121 HLVDEIIKYWVTKVEE---XXXXXXXXXSSRVFKKIYRLEITLELLIFQIVRVMDYQPQV 180

Query: 181 MIMVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESEKSVLQMPCLH 240
           ++MVPTSDSA+ESML+RVEN+      DD+ I+CVICLEEI  KEE+ SE  VLQMPCLH
Sbjct: 181 LMMVPTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEI-GKEEKGSEGVVLQMPCLH 240

Query: 241 MFHGECINKWLKTSHYCPTCRFSMPTN 260
           +FHGECINKWL TSHYCPTCRF MP N
Sbjct: 241 VFHGECINKWLNTSHYCPTCRFPMPIN 263

[Close]

BLAST of MELO3C028580.2.1 vs. TrEMBL
Match: tr|A0A0A0K7L0|A0A0A0K7L0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 8.8e-67
Identity = 143/278 (51.44%), Postives = 188/278 (67.63%), Query Frame = 0


Query: 1   MAAQIFNICR--NRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKC 60
           MA QIF  CR  +  ++GMSL I D     ++ + +IRT  NS   V+ IDLNFKV++KC
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDP-DLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60

Query: 61  SHFLVYEDGITTT--TSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREF 120
            H+    +G  +T  T+ L+EH S  HPL T +LP+SIFKHGDK L++ LF +F +YR  
Sbjct: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120

Query: 121 INTTLVADRLIQHWVKRVEEDDHXXXXXXXXHDFNVFQKIYPLEITLEMRIIQ------- 180
           IN  LV D +I+HWVK+V+E++             VF++IYPLEIT+E+ + Q       
Sbjct: 121 INIELVVDEIIKHWVKKVDEENSTS---------QVFEEIYPLEITIELLVYQMIHAIDQ 180

Query: 181 --RYVEESPIMIMVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESE 240
               + + P ++MVPTS+SA+ESML++VEN+      D++ INCVICLEEI SKE++ SE
Sbjct: 181 PHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEI-SKEKKGSE 240

Query: 241 KSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMPTNN 261
             VLQMPCLHMFH ECI KWLK SHYCPTCRFSMPTNN
Sbjct: 241 AVVLQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]

BLAST of MELO3C028580.2.1 vs. TrEMBL
Match: tr|A0A0A0K2A1|A0A0A0K2A1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.4e-64
Identity = 139/273 (50.92%), Postives = 180/273 (65.93%), Query Frame = 0


Query: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
           MA Q F+ C +  ++GMSL I D           I+TR NS   V+ IDLNFKV++KC H
Sbjct: 1   MAEQNFDDCTSGYYMGMSLRITDP----------IQTRSNSPTSVKQIDLNFKVEVKCQH 60

Query: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT 120
           F   E+  T  T+FL+EH     P    +LP+SIFKHGDK L++ LF KF ++R  IN  
Sbjct: 61  FQAGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIE 120

Query: 121 LVADRLIQHWVKRVEEDDHXXXXXXXXHDFNVFQKIYPLEITLEMRIIQ--------RYV 180
           LV D++I+HWVK+VE+D          ++  VF++IYPLEIT+E+ ++Q        +  
Sbjct: 121 LVTDQIIKHWVKKVEDDKE--------NNSGVFEEIYPLEITIEVLVLQMIDAVDQPQET 180

Query: 181 EESPIMIMVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESEKSVLQ 240
            + P + MVPTSDSA++SML+RVEN+      D + I+CVICLE+I SKEE+ SE  VLQ
Sbjct: 181 IDQPQVRMVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKI-SKEEKGSEGVVLQ 240

Query: 241 MPCLHMFHGECINKWLKTSHYCPTCRFSMPTNN 261
           MPCLHMFH ECI KWLKTSHYCPTCRFSM  NN
Sbjct: 241 MPCLHMFHEECIRKWLKTSHYCPTCRFSMTINN 254

[Close]

BLAST of MELO3C028580.2.1 vs. TrEMBL
Match: tr|E5GCQ3|E5GCQ3_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.3e-64
Identity = 144/274 (52.55%), Postives = 186/274 (67.88%), Query Frame = 0


Query: 1   MAAQIFNICR--NRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKC 60
           MA +IFNICR  +  ++GMSL I D         +  +T  +S   V+ I L FKVQLKC
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQT--SSPTLVEQICLKFKVQLKC 60

Query: 61  SHFLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFIN 120
            HF V+E G   +T+ + EH    H  AT++LPISIFKHGDK L++ LF +F +Y + IN
Sbjct: 61  QHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIIN 120

Query: 121 TTLVADRLIQHWVKRVEEDDHXXXXXXXXHDFNV-FQKIYPLEITLEMRIIQ--RYVEES 180
             L+A+ +I+HWV++VEE++         ++ NV F+KIYPLEI + + + +  R V+  
Sbjct: 121 IELLANEIIKHWVRKVEEEE------DQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPR 180

Query: 181 PIMI----MVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESEKSVL 240
             MI    MVPTSDSA+ESML+RVEN+      DDE INCV+CLEEI SKEE+ SE +VL
Sbjct: 181 LAMIDQPLMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEI-SKEEKGSETTVL 240

Query: 241 QMPCLHMFHGECINKWLKTSHYCPTCRFSMPTNN 261
           QMPCLHMFH ECI KWLKTSHYCPTCRFSMP +N
Sbjct: 241 QMPCLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

The following BLAST results are available for this feature:

BLAST of MELO3C028580.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659722.1	1.3e-106	75.00	PREDICTED: uncharacterized protein LOC105436242 [Cucumis sativus] >KGN43806.1 hy...	[more]
KGN43805.1	1.1e-68	56.18	hypothetical protein Csa_7G068580 [Cucumis sativus]	[more]
KGN43801.1	1.3e-66	51.44	hypothetical protein Csa_7G067560 [Cucumis sativus]	[more]
KGN43800.1	3.6e-64	50.92	hypothetical protein Csa_7G067550 [Cucumis sativus]	[more]
ADN34252.1	8.1e-64	52.55	hypothetical zinc finger protein [Cucumis melo subsp. melo]	[more]

BLAST of MELO3C028580.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08139.1	7.4e-11	36.67	RING/U-box superfamily protein	[more]
AT2G29840.1	2.1e-10	30.30	RING/U-box superfamily protein	[more]
AT3G13228.1	3.7e-10	29.41	RING/U-box superfamily protein	[more]
AT3G46620.1	6.2e-10	39.24	zinc finger (C3HC4-type RING finger) family protein	[more]
AT1G74620.1	8.2e-10	48.08	RING/U-box superfamily protein	[more]

BLAST of MELO3C028580.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q7ZW78\|RN181_DANRE	3.9e-09	35.00	E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2	[more]
sp\|Q6AXU4\|RN181_RAT	8.6e-09	36.71	E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 ...	[more]
sp\|Q9SNB6\|RDUF1_ARATH	1.1e-08	39.24	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
sp\|Q9CY62\|RN181_MOUSE	1.1e-08	35.44	E3 ubiquitin-protein ligase RNF181 OS=Mus musculus OX=10090 GN=Rnf181 PE=1 SV=1	[more]
sp\|Q9LQX2\|MPSR1_ARATH	1.5e-08	41.51	E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ...	[more]

BLAST of MELO3C028580.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K7L5\|A0A0A0K7L5_CUCSA	8.7e-107	75.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G068590 PE=4 SV=1	[more]
tr\|A0A0A0K2A5\|A0A0A0K2A5_CUCSA	7.2e-69	56.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G068580 PE=4 SV=1	[more]
tr\|A0A0A0K7L0\|A0A0A0K7L0_CUCSA	8.8e-67	51.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 PE=4 SV=1	[more]
tr\|A0A0A0K2A1\|A0A0A0K2A1_CUCSA	2.4e-64	50.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 PE=4 SV=1	[more]
tr\|E5GCQ3\|E5GCQ3_CUCME	5.3e-64	52.55	Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING
IPR011016	Znf_RING-CH

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C028580.2	MELO3C028580.2	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C028580.2.1.CDS.1	MELO3C028580.2.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C028580.2.1.exon.1	MELO3C028580.2.1.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C028580.2.1	MELO3C028580.2.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 205..253 e-value: 0.0023 score: 12.7
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 206..252 e-value: 5.0E-8 score: 42.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 205..253 e-value: 3.6E-12 score: 46.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 206..253 score: 12.74
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 174..259 e-value: 4.4E-17 score: 63.5
None	No IPR available	PANTHER	PTHR44683	FAMILY NOT NAMED	coord: 135..260
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 196..257