MELO3C025692T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C025692T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Pentatricopeptide repeat-containing protein, putative
Location	chr11 : 24946927 .. 24947687 (+)
Sequence length	591

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAAGCGTAATGGGCTGAATGGACTTTGGAATAGACAGGCCAAGTGGGATGAGGTGTTAAATTAGGGCTAAGGGTGTAAATTAGACGCTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTGACAAAATTTATGCAACGGCCTTCTAGGTATTTGCCATGTTATGCCAACTCAATTAAATTTATTTAATGAACACTTTATAATGTCTACCATGTTATTGCAGGATGCATCATTGCAAGGTTTTCCAGAATCTCCAAAATCAGTTGTTCTGATCACTGGAACAGCAGAATATAACATGATTTCACTCAATAGCACACTGAAAGTATGTCTATGGGAGATGGGTTCTCCTTTTCTACCTTGTAGAACTCGTAGCGGTCTTCTTATAGCAAAAGCTCACTCTCTCAGGATGTGGCTAAAAGACTCCTCTTTTTGTTTGGACCTTGAGTTGAAAGATGCCCCGGCTCTACCAGAATTTAATTCGATGAAGGTCATCAATGGATGCTTCATAAGACGAGGTCTTGTTCCTGCATTCAAGGACATAACTGGAAGATTGGGATTTGTGAGGCCTAAGAAATTCTCTAGATTGGCTTTACTCCCTGATGAAAAGAGAGATAAGGTCATTGAAGCGGATTTAGAAGGTAGGAAAGAGAAGCTTGAAAAAGTAAAACAACTTATCGAGTCAGGGAAGGCGAAGAGGATAACGAAGATTAAAAAGAGGGCATACTATCGTAGACTCGATGCTCTAAAGAAAAAATAG

mRNA sequence

ATGTTGAAGCGTAATGGGCTGAATGGACTTTGGAATAGACAGGCCAAGTGGGATGAGGATGCATCATTGCAAGGTTTTCCAGAATCTCCAAAATCAGTTGTTCTGATCACTGGAACAGCAGAATATAACATGATTTCACTCAATAGCACACTGAAAGTATGTCTATGGGAGATGGGTTCTCCTTTTCTACCTTGTAGAACTCGTAGCGGTCTTCTTATAGCAAAAGCTCACTCTCTCAGGATGTGGCTAAAAGACTCCTCTTTTTGTTTGGACCTTGAGTTGAAAGATGCCCCGGCTCTACCAGAATTTAATTCGATGAAGGTCATCAATGGATGCTTCATAAGACGAGGTCTTGTTCCTGCATTCAAGGACATAACTGGAAGATTGGGATTTGTGAGGCCTAAGAAATTCTCTAGATTGGCTTTACTCCCTGATGAAAAGAGAGATAAGGTCATTGAAGCGGATTTAGAAGGTAGGAAAGAGAAGCTTGAAAAAGTAAAACAACTTATCGAGTCAGGGAAGGCGAAGAGGATAACGAAGATTAAAAAGAGGGCATACTATCGTAGACTCGATGCTCTAAAGAAAAAATAG

Coding sequence (CDS)

ATGTTGAAGCGTAATGGGCTGAATGGACTTTGGAATAGACAGGCCAAGTGGGATGAGGATGCATCATTGCAAGGTTTTCCAGAATCTCCAAAATCAGTTGTTCTGATCACTGGAACAGCAGAATATAACATGATTTCACTCAATAGCACACTGAAAGTATGTCTATGGGAGATGGGTTCTCCTTTTCTACCTTGTAGAACTCGTAGCGGTCTTCTTATAGCAAAAGCTCACTCTCTCAGGATGTGGCTAAAAGACTCCTCTTTTTGTTTGGACCTTGAGTTGAAAGATGCCCCGGCTCTACCAGAATTTAATTCGATGAAGGTCATCAATGGATGCTTCATAAGACGAGGTCTTGTTCCTGCATTCAAGGACATAACTGGAAGATTGGGATTTGTGAGGCCTAAGAAATTCTCTAGATTGGCTTTACTCCCTGATGAAAAGAGAGATAAGGTCATTGAAGCGGATTTAGAAGGTAGGAAAGAGAAGCTTGAAAAAGTAAAACAACTTATCGAGTCAGGGAAGGCGAAGAGGATAACGAAGATTAAAAAGAGGGCATACTATCGTAGACTCGATGCTCTAAAGAAAAAATAG

Protein sequence

MLKRNGLNGLWNRQAKWDEDASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDAPALPEFNSMKVINGCFIRRGLVPAFKDITGRLGFVRPKKFSRLALLPDEKRDKVIEADLEGRKEKLEKVKQLIESGKAKRITKIKKRAYYRRLDALKKK*

Homology

[Close]

BLAST of MELO3C025692T1 vs. Swiss-Prot
Match: PP241_ARATH (Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana GN=EMB1270 PE=2 SV=2)

HSP 1 Score: 237.7 bits (605), Expect = 1.1e-61
Identity = 115/151 (76.16%), Postives = 132/151 (87.42%), Query Frame = 1


Query: 19   EDASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTRSGLLIAKAHS 78
            +DASL+G+PESPKSVVLITGTAEYN ISL+ TLK CLWEMGSPFLPC+TR+GLL+AKAHS
Sbjct: 1270 QDASLEGYPESPKSVVLITGTAEYNGISLDKTLKACLWEMGSPFLPCKTRTGLLVAKAHS 1329

Query: 79   LRMWLKDSSFCLDLELKDAPALPEFNSMKVINGCFIRRGLVPAFKDITGRL-GFVRPKKF 138
            LRMWLKDS FC DLELKD+ +LPE NSM +I+GCFIRRGLVPAF  I  RL GFV PKKF
Sbjct: 1330 LRMWLKDSPFCFDLELKDSVSLPESNSMDLIDGCFIRRGLVPAFNHIKERLGGFVSPKKF 1389

Query: 139  SRLALLPDEKRDKVIEADLEGRKEKLEKVKQ 169
            SRLALLPDE R++VI+ D+EG ++KLEK+K+
Sbjct: 1390 SRLALLPDEMRERVIKTDIEGHRQKLEKMKK 1420

[Close]

BLAST of MELO3C025692T1 vs. TrEMBL
Match: A0A0A0KHH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G220980 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 8.8e-90
Identity = 169/178 (94.94%), Postives = 173/178 (97.19%), Query Frame = 1


Query: 19  EDASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTRSGLLIAKAHS 78
           +DASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTR GLLIAKAHS
Sbjct: 7   QDASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTRGGLLIAKAHS 66

Query: 79  LRMWLKDSSFCLDLELKDAPALPEFNSMKVINGCFIRRGLVPAFKDITGRLGFVRPKKFS 138
           LRMWLKDSSFCLDLELKDAPALPEFNSMKVI+GCFIRRGLVPAFKDIT RLGFVRPKKFS
Sbjct: 67  LRMWLKDSSFCLDLELKDAPALPEFNSMKVIDGCFIRRGLVPAFKDITERLGFVRPKKFS 126

Query: 139 RLALLPDEKRDKVIEADLEGRKEKLEKVKQLIESGKAKRITKIKKRAYYRRLDALKKK 197
           RLALLPDEKRDKVI+ADLEGRKEKLEKV QLI+SGK KRI KIKKRAYYRRLDALKKK
Sbjct: 127 RLALLPDEKRDKVIKADLEGRKEKLEKVTQLIKSGKVKRIMKIKKRAYYRRLDALKKK 184

[Close]

BLAST of MELO3C025692T1 vs. TrEMBL
Match: M5WF65_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023974mg PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.4e-71
Identity = 132/169 (78.11%), Postives = 153/169 (90.53%), Query Frame = 1


Query: 20   DASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTRSGLLIAKAHSL 79
            DASL+G+PESPKSVVLITGT+EYNM+SLNSTLK CLWEMGSPFLPC+TRSGLL+AKAHSL
Sbjct: 1167 DASLEGYPESPKSVVLITGTSEYNMVSLNSTLKACLWEMGSPFLPCKTRSGLLVAKAHSL 1226

Query: 80   RMWLKDSSFCLDLELKDAPALPEFNSMKVINGCFIRRGLVPAFKDITGRLGFVRPKKFSR 139
            RMWLKDS FCLDLELKDAPALPE NSM++I+GCF+RRGLVPAFK+IT RLG VRPKKF+R
Sbjct: 1227 RMWLKDSPFCLDLELKDAPALPESNSMQLIDGCFLRRGLVPAFKEITERLGLVRPKKFAR 1286

Query: 140  LALLPDEKRDKVIEADLEGRKEKLEKVKQLIESGKAKRITKIKKRAYYR 189
            LALL DEKR+KVI++D+EGRKEKLEK+K+     +  RI K++KR Y R
Sbjct: 1287 LALLSDEKREKVIQSDIEGRKEKLEKMKENDNPRRVSRIKKLRKRKYVR 1335

[Close]

BLAST of MELO3C025692T1 vs. TrEMBL
Match: A0A0D2QFV8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G050800 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 5.4e-71
Identity = 131/171 (76.61%), Postives = 153/171 (89.47%), Query Frame = 1


Query: 19   EDASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTRSGLLIAKAHS 78
            +DASLQG+PESPKSVVLITGT+EYNM+SLNSTLK CLWEMGSPFLPC+TRSGLL+AKAHS
Sbjct: 1284 QDASLQGYPESPKSVVLITGTSEYNMVSLNSTLKACLWEMGSPFLPCKTRSGLLVAKAHS 1343

Query: 79   LRMWLKDSSFCLDLELKDAPALPEFNSMKVINGCFIRRGLVPAFKDITGRLGFVRPKKFS 138
            LRMWLKDS FCLDLELK+AP+LPE NSM++I GCFIRRGLVPAFKDIT RLG VRPKKF+
Sbjct: 1344 LRMWLKDSPFCLDLELKNAPSLPELNSMQLIEGCFIRRGLVPAFKDITERLGLVRPKKFA 1403

Query: 139  RLALLPDEKRDKVIEADLEGRKEKLEKVKQLIESGKAKRITKIKKRAYYRR 190
            RLALL DEKR+K IEAD+EG KEKLEK+K  + S + + + +++KR + RR
Sbjct: 1404 RLALLSDEKREKAIEADIEGGKEKLEKLKSKVGSKRTRVVKQLRKRKFIRR 1454

[Close]

BLAST of MELO3C025692T1 vs. TrEMBL
Match: A0A0D2MJG1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G050800 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 5.4e-71
Identity = 131/171 (76.61%), Postives = 153/171 (89.47%), Query Frame = 1


Query: 19   EDASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTRSGLLIAKAHS 78
            +DASLQG+PESPKSVVLITGT+EYNM+SLNSTLK CLWEMGSPFLPC+TRSGLL+AKAHS
Sbjct: 1255 QDASLQGYPESPKSVVLITGTSEYNMVSLNSTLKACLWEMGSPFLPCKTRSGLLVAKAHS 1314

Query: 79   LRMWLKDSSFCLDLELKDAPALPEFNSMKVINGCFIRRGLVPAFKDITGRLGFVRPKKFS 138
            LRMWLKDS FCLDLELK+AP+LPE NSM++I GCFIRRGLVPAFKDIT RLG VRPKKF+
Sbjct: 1315 LRMWLKDSPFCLDLELKNAPSLPELNSMQLIEGCFIRRGLVPAFKDITERLGLVRPKKFA 1374

Query: 139  RLALLPDEKRDKVIEADLEGRKEKLEKVKQLIESGKAKRITKIKKRAYYRR 190
            RLALL DEKR+K IEAD+EG KEKLEK+K  + S + + + +++KR + RR
Sbjct: 1375 RLALLSDEKREKAIEADIEGGKEKLEKLKSKVGSKRTRVVKQLRKRKFIRR 1425

[Close]

BLAST of MELO3C025692T1 vs. TrEMBL
Match: A0A061EYX6_THECC (Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_025372 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 3.9e-69
Identity = 127/171 (74.27%), Postives = 151/171 (88.30%), Query Frame = 1


Query: 19   EDASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTRSGLLIAKAHS 78
            +DA+LQG+PESPKSVVLITGTAEYNM+SLN TLK CLWEMGSPFLPC+TRSGLL+AKAHS
Sbjct: 1286 QDAALQGYPESPKSVVLITGTAEYNMVSLNYTLKACLWEMGSPFLPCKTRSGLLVAKAHS 1345

Query: 79   LRMWLKDSSFCLDLELKDAPALPEFNSMKVINGCFIRRGLVPAFKDITGRLGFVRPKKFS 138
            LRMWLKDS FCLDLELKDAP+LPE NSM+++ GCF+RRGLVPAFKDIT RLG VRPKKF+
Sbjct: 1346 LRMWLKDSPFCLDLELKDAPSLPELNSMQLVEGCFMRRGLVPAFKDITERLGLVRPKKFA 1405

Query: 139  RLALLPDEKRDKVIEADLEGRKEKLEKVKQLIESGKAKRITKIKKRAYYRR 190
            RLALL D++R+K I+AD++G KEKLEK+K  +    A+ I K++KR + RR
Sbjct: 1406 RLALLSDDRREKAIQADIQGGKEKLEKLKTKVGYKGARNIKKLRKRKFIRR 1456

[Close]

BLAST of MELO3C025692T1 vs. TAIR10
Match: AT3G18110.1 (AT3G18110.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 237.7 bits (605), Expect = 6.3e-63
Identity = 115/151 (76.16%), Postives = 132/151 (87.42%), Query Frame = 1


Query: 19   EDASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTRSGLLIAKAHS 78
            +DASL+G+PESPKSVVLITGTAEYN ISL+ TLK CLWEMGSPFLPC+TR+GLL+AKAHS
Sbjct: 1270 QDASLEGYPESPKSVVLITGTAEYNGISLDKTLKACLWEMGSPFLPCKTRTGLLVAKAHS 1329

Query: 79   LRMWLKDSSFCLDLELKDAPALPEFNSMKVINGCFIRRGLVPAFKDITGRL-GFVRPKKF 138
            LRMWLKDS FC DLELKD+ +LPE NSM +I+GCFIRRGLVPAF  I  RL GFV PKKF
Sbjct: 1330 LRMWLKDSPFCFDLELKDSVSLPESNSMDLIDGCFIRRGLVPAFNHIKERLGGFVSPKKF 1389

Query: 139  SRLALLPDEKRDKVIEADLEGRKEKLEKVKQ 169
            SRLALLPDE R++VI+ D+EG ++KLEK+K+
Sbjct: 1390 SRLALLPDEMRERVIKTDIEGHRQKLEKMKK 1420

[Close]

BLAST of MELO3C025692T1 vs. NCBI nr
Match: gi|659127668|ref|XP_008463825.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Cucumis melo])

HSP 1 Score: 353.6 bits (906), Expect = 2.2e-94
Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 1


Query: 19   EDASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTRSGLLIAKAHS 78
            +DASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTRSGLLIAKAHS
Sbjct: 1290 QDASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTRSGLLIAKAHS 1349

Query: 79   LRMWLKDSSFCLDLELKDAPALPEFNSMKVINGCFIRRGLVPAFKDITGRLGFVRPKKFS 138
            LRMWLKDSSFCLDLELKDAPALPEFNSMKVINGCFIRRGLVPAFKDITGRLGFVRPKKFS
Sbjct: 1350 LRMWLKDSSFCLDLELKDAPALPEFNSMKVINGCFIRRGLVPAFKDITGRLGFVRPKKFS 1409

Query: 139  RLALLPDEKRDKVIEADLEGRKEKLEKVKQLIESGKAKRITKIKKRAYYRRLDALKKK 197
            RLALLPDEKRDKVIEADLEGRKEKLEKVKQLIESGKAKRITKIKKRAYYRRLDALKKK
Sbjct: 1410 RLALLPDEKRDKVIEADLEGRKEKLEKVKQLIESGKAKRITKIKKRAYYRRLDALKKK 1467

[Close]

BLAST of MELO3C025692T1 vs. NCBI nr
Match: gi|778714106|ref|XP_011657187.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 337.8 bits (865), Expect = 1.3e-89
Identity = 169/178 (94.94%), Postives = 173/178 (97.19%), Query Frame = 1


Query: 19   EDASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTRSGLLIAKAHS 78
            +DASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTR GLLIAKAHS
Sbjct: 1293 QDASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTRGGLLIAKAHS 1352

Query: 79   LRMWLKDSSFCLDLELKDAPALPEFNSMKVINGCFIRRGLVPAFKDITGRLGFVRPKKFS 138
            LRMWLKDSSFCLDLELKDAPALPEFNSMKVI+GCFIRRGLVPAFKDIT RLGFVRPKKFS
Sbjct: 1353 LRMWLKDSSFCLDLELKDAPALPEFNSMKVIDGCFIRRGLVPAFKDITERLGFVRPKKFS 1412

Query: 139  RLALLPDEKRDKVIEADLEGRKEKLEKVKQLIESGKAKRITKIKKRAYYRRLDALKKK 197
            RLALLPDEKRDKVI+ADLEGRKEKLEKV QLI+SGK KRI KIKKRAYYRRLDALKKK
Sbjct: 1413 RLALLPDEKRDKVIKADLEGRKEKLEKVTQLIKSGKVKRIMKIKKRAYYRRLDALKKK 1470

[Close]

BLAST of MELO3C025692T1 vs. NCBI nr
Match: gi|700192027|gb|KGN47231.1| (hypothetical protein Csa_6G220980 [Cucumis sativus])

HSP 1 Score: 337.8 bits (865), Expect = 1.3e-89
Identity = 169/178 (94.94%), Postives = 173/178 (97.19%), Query Frame = 1


Query: 19  EDASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTRSGLLIAKAHS 78
           +DASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTR GLLIAKAHS
Sbjct: 7   QDASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTRGGLLIAKAHS 66

Query: 79  LRMWLKDSSFCLDLELKDAPALPEFNSMKVINGCFIRRGLVPAFKDITGRLGFVRPKKFS 138
           LRMWLKDSSFCLDLELKDAPALPEFNSMKVI+GCFIRRGLVPAFKDIT RLGFVRPKKFS
Sbjct: 67  LRMWLKDSSFCLDLELKDAPALPEFNSMKVIDGCFIRRGLVPAFKDITERLGFVRPKKFS 126

Query: 139 RLALLPDEKRDKVIEADLEGRKEKLEKVKQLIESGKAKRITKIKKRAYYRRLDALKKK 197
           RLALLPDEKRDKVI+ADLEGRKEKLEKV QLI+SGK KRI KIKKRAYYRRLDALKKK
Sbjct: 127 RLALLPDEKRDKVIKADLEGRKEKLEKVTQLIKSGKVKRIMKIKKRAYYRRLDALKKK 184

[Close]

BLAST of MELO3C025692T1 vs. NCBI nr
Match: gi|923928588|ref|XP_013733140.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic-like [Brassica napus])

HSP 1 Score: 276.9 bits (707), Expect = 2.7e-71
Identity = 132/171 (77.19%), Postives = 153/171 (89.47%), Query Frame = 1


Query: 19   EDASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTRSGLLIAKAHS 78
            +DASLQG+PESPKSVVLITGT+EYNM+SLNSTLK CLWEMGSPFLPC+TRSGLL+AKAHS
Sbjct: 1284 QDASLQGYPESPKSVVLITGTSEYNMVSLNSTLKACLWEMGSPFLPCKTRSGLLVAKAHS 1343

Query: 79   LRMWLKDSSFCLDLELKDAPALPEFNSMKVINGCFIRRGLVPAFKDITGRLGFVRPKKFS 138
            LRMWLKDS FCLDLELK+AP+LPE NSM++I GCFIRRGLVPAFKDIT RLG VRPKKF+
Sbjct: 1344 LRMWLKDSPFCLDLELKNAPSLPELNSMQLIEGCFIRRGLVPAFKDITERLGLVRPKKFA 1403

Query: 139  RLALLPDEKRDKVIEADLEGRKEKLEKVKQLIESGKAKRITKIKKRAYYRR 190
            RLALL DEKR+K IEAD+EG KEKLEK+K  + S + + + K++KR + RR
Sbjct: 1404 RLALLSDEKREKAIEADIEGGKEKLEKLKSKVGSKRTRVVKKLRKRKFIRR 1454

[Close]

BLAST of MELO3C025692T1 vs. NCBI nr
Match: gi|595833618|ref|XP_007206704.1| (hypothetical protein PRUPE_ppa023974mg [Prunus persica])

HSP 1 Score: 276.6 bits (706), Expect = 3.5e-71
Identity = 132/169 (78.11%), Postives = 153/169 (90.53%), Query Frame = 1


Query: 20   DASLQGFPESPKSVVLITGTAEYNMISLNSTLKVCLWEMGSPFLPCRTRSGLLIAKAHSL 79
            DASL+G+PESPKSVVLITGT+EYNM+SLNSTLK CLWEMGSPFLPC+TRSGLL+AKAHSL
Sbjct: 1167 DASLEGYPESPKSVVLITGTSEYNMVSLNSTLKACLWEMGSPFLPCKTRSGLLVAKAHSL 1226

Query: 80   RMWLKDSSFCLDLELKDAPALPEFNSMKVINGCFIRRGLVPAFKDITGRLGFVRPKKFSR 139
            RMWLKDS FCLDLELKDAPALPE NSM++I+GCF+RRGLVPAFK+IT RLG VRPKKF+R
Sbjct: 1227 RMWLKDSPFCLDLELKDAPALPESNSMQLIDGCFLRRGLVPAFKEITERLGLVRPKKFAR 1286

Query: 140  LALLPDEKRDKVIEADLEGRKEKLEKVKQLIESGKAKRITKIKKRAYYR 189
            LALL DEKR+KVI++D+EGRKEKLEK+K+     +  RI K++KR Y R
Sbjct: 1287 LALLSDEKREKVIQSDIEGRKEKLEKMKENDNPRRVSRIKKLRKRKYVR 1335

The following BLAST results are available for this feature:

BLAST of MELO3C025692T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP241_ARATH	1.1e-61	76.16	Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidop...	[more]

BLAST of MELO3C025692T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHH7_CUCSA	8.8e-90	94.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G220980 PE=4 SV=1	[more]
M5WF65_PRUPE	2.4e-71	78.11	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023974mg PE=4 SV=1	[more]
A0A0D2QFV8_GOSRA	5.4e-71	76.61	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G050800 PE=4 SV=1	[more]
A0A0D2MJG1_GOSRA	5.4e-71	76.61	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G050800 PE=4 SV=1	[more]
A0A061EYX6_THECC	3.9e-69	74.27	Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_025...	[more]

BLAST of MELO3C025692T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18110.1	6.3e-63	76.16	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of MELO3C025692T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659127668\|ref\|XP_008463825.1\|	2.2e-94	99.44	PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic ...	[more]
gi\|778714106\|ref\|XP_011657187.1\|	1.3e-89	94.94	PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic ...	[more]
gi\|700192027\|gb\|KGN47231.1\|	1.3e-89	94.94	hypothetical protein Csa_6G220980 [Cucumis sativus]	[more]
gi\|923928588\|ref\|XP_013733140.1\|	2.7e-71	77.19	PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic-...	[more]
gi\|595833618\|ref\|XP_007206704.1\|	3.5e-71	78.11	hypothetical protein PRUPE_ppa023974mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008568	microtubule-severing ATPase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C025692	MELO3C025692	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C025692T1	MELO3C025692T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C025692T1.cds1	MELO3C025692T1.cds1	CDS
MELO3C025692T1.cds2	MELO3C025692T1.cds2	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 183..196 scor