MELO3C025541T2 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C025541T2
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Thymidine kinase
Location	chr12 : 13116672 .. 13119686 (-)
Sequence length	1334

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCGATGTTCAACAATTTACGAATATTTCTCATCTGCAATCCCAAAACCCCATTAAAACCCTCAACCGATTGCTCATCTTAACAACCATTTCAAGCATGAAATCCTTGGTATCTTCCTCCTCTTTCTCGATCCTCTCCCCCTATTTCCCCATTTCTGCTTCTCCATCCTTCTTTTCTTTGCCTTCTAAATCTGCGCAATGCGGCCCTATGTTCACCCAAGTCTCCAATTTTTTCACTTTCAAAACACCCACAACTTCCTTGCCCTCAAAAGGGTTTTTTTCAACCCAGAATCGAAACCCCCAAACGAGGGCCTCTTTGTCTCCGCCCTCCGGCGAGATTCATGTCATTCTGGGGCCGATGTTTGCTGGGAAAACTACCACTCTTCTTCGGCGGATTCAGTCCGAGAGCTGCAATGGCAGGTCTTTTATGCTCTGCTTTCGTTCTTCCGTTTATTATTAACAATTTTTTTTTTAAATCTTTTAATATATTCTCAGCACTCTCTCTGTATTGGCTTGATTATTAGCATGGTGGTATTAGTATGAAATGGGGAAAAATGGTATTGAACTTACAACCTCTTGCGCTATATTACTTTAATCGACACTGAATATGAGTGGTTGGGTGGATAAGCTATGGTGAATTTGATATTTTCTACTATATCCGTACGAATTTCTCAATAATAGAGTTATGTATATTGGTGCTGAATGAGGTTTATACTGATATATGATGTCGTGGGGTATGGCCGCTTGATAGAGAATGAATTAAACGAGTGAATTTGCGAAACTAAACTAACTGATTCTTTGAAGAAAAACCTTTAGAAAAAGAATGAAATGGAAAGAAAAAAAAAAATCCTAAACTTTCCCTTGCTCCTTGCTCCCTTAACTCATTTTTTCTTAAAGAAACAGAAACAAAAGAAACACCTTTATTTTTTAGCTCAACATGGTAAAAGCTAGCCTTATTAACGTTAAACCTCATGAACTTGGGGTTTTCTTTCAATGAAGACTGCTAATATGGAAACACTGTTTCACCAAGGGGCTGGGTACATTTTCCACTCAATCTGTAGAATATAGGGACATTTAAACAGGTAAAATCCATTTACACCATGCTTTCTGCAGAGTATGCTGCAAATCAATCTACTAATCTCCTATTTGGTGTTGGATCACATGGTTGGAGATGATACAAGAGTTCAATGAGATTTGTGAATTAAGGCTTAGAGAGAACATGTTCAAGTCATGGTGGCCCTCTATCTAAAATTTAATATCATATGAGTTTCTTTGACAATTAAATGAAGCTGAGCTAACCAGCCAGATTATTGCCCTGTGACAATTGTTGAAGGCACTCAAGTTAGCTGAAATTCTCTCAAGAGAAAAAAGTTGTGGAGCTTTTGATAGATTTAATATTTCGATGCTCTTCCTTAGTCCATCTTCAGGTTGTAGATCTTCGATTAAGTGGTCTTTGTCATCATTTTATTTTTCATTCGTAGAATCTTTCGTTTTTTGTTGGGTTGACATCTTGTCTTCACTATTTTATATCTTTATATTGAAAATATTTCCCAAGCTTCGTATATTACCTTTTGAAATTTTAGAACCTAATTACTTGGATGGAATGTGTACTCTGTGTATCTTAATTGGTGTAGAAGCTTCCTTTTGTGGTTCAATTCAGAAGATTTATTCCTTTTCCTTTTCATGCACATTTTTTTTACAGAAATGTAGCTATAATTAAGTCGAATAAAGACACAAGGTATGGATTGGATTCTATTGTTACACATGACGGCATGAAACTGCCTTGCTGGGCAATACCAAACTTATCATCATTCAAAAAGAAATTTGGTCAAGGTTCCTATGACAAGGTATCATATTCTCCCTCTCTTTATGATGCCAATATCATGCTTAGACACTTCGTTAATAAAATGCGAAGTATTCGAACCCTTATAAAAGGTAGCAAAGTACTTAAATCTATGAGGCTAAAGATTTTATTTCCAATTAGAATGAGCAGAAAACTGAATGGGTAGCCTTCTGAATTTCGGTATCCGTAATAATTGGAACTCCTGATTTTCTTGGTAACCAAATTGTTAATTTACATATGATGTTGGTGTGACAGCTAGATGTGATTGGAATTGATGAAGCTCAATTTTTCGATGATCTTTATGATTTCTGTTGCGAAGCTGCTGATATTGATGGCAAAACAGTTATAGTTGCTGGGCTGGATGGGGATTACTTGAGGTATAATCAAATTTACTGTCTTACTTTTGGTTCATACGTTTAATTTCAATGATGTTCTTAGAAACTGATGGCCTTTCATATGGTAAAACACTCGATAGAACTTCAGATTGGTTTCTAAATTGACTGATCATTAGTAACTCAATTGAAGCTTTTGTGTTGGGGTCTATACAAAAAACTGAACAGGAGGAACTTCGGTTCAGTTCTCGATATAATTCCACTTGCTGATTCTGTAACTAAGTTAACTGCTCGATGTGAAATCTGCGGGAATCGGGCTTTCTTTACTTTAAGGAAGACGCAAGAAAAAGAGACCGAGCTGATTGGCGGTGCTGATGTGTACATGCCCGTATGTCGACAACATTACGTCAGCGGGCAAGTAGTGATAGAGGCAGCAAGAACTGTAGTAGAATCACGCAAGGTTGAGTGTAGGACTCCAGCATAGTTCTTAGTAGGTAGAGTAGGTCTGGCATCATATACATCCCCAATAGCGAATATCGCAACGTATTATTTGTCCGGACAATTAAGTAAACCAAGGGTCGAGGATGATTTCGGAACTACGGTGAGCATAGTTGTAGGGTTAGGGATATTGTTTTGTTTAATAACTGTAATTGAGTTTGATTATGCCTGTATTTTGATGGCTGCTTTGATTGATTGGATTAGATGGAAGGAAAAAATGAGTCAAATGTTGTATGTAACCAACAAAATTGAAAACTAATACATTATTGGGGGAGGAGACATTCAAAGTGGCAACCATGTGTTTGCTTGGGAAGTTGTTGATCAGCCAGCTGTTGATTTTGTT

mRNA sequence

CCCGATGTTCAACAATTTACGAATATTTCTCATCTGCAATCCCAAAACCCCATTAAAACCCTCAACCGATTGCTCATCTTAACAACCATTTCAAGCATGAAATCCTTGGTATCTTCCTCCTCTTTCTCGATCCTCTCCCCCTATTTCCCCATTTCTGCTTCTCCATCCTTCTTTTCTTTGCCTTCTAAATCTGCGCAATGCGGCCCTATGTTCACCCAAGTCTCCAATTTTTTCACTTTCAAAACACCCACAACTTCCTTGCCCTCAAAAGGGTTTTTTTCAACCCAGAATCGAAACCCCCAAACGAGGGCCTCTTTGTCTCCGCCCTCCGGCGAGATTCATGTCATTCTGGGGCCGATGTTTGCTGGGAAAACTACCACTCTTCTTCGGCGGATTCAGTCCGAGAGCTGCAATGGCAGAAATGTAGCTATAATTAAGTCGAATAAAGACACAAGGTATGGATTGGATTCTATTGTTACACATGACGGCATGAAACTGCCTTGCTGGGCAATACCAAACTTATCATCATTCAAAAAGAAATTTGGTCAAGGTTCCTATGACAAGCTAGATGTGATTGGAATTGATGAAGCTCAATTTTTCGATGATCTTTATGATTTCTGTTGCGAAGCTGCTGATATTGATGGCAAAACAGTTATAGTTGCTGGGCTGGATGGGGATTACTTGAGCTTTTGTGTTGGGGTCTATACAAAAAACTGAACAGGAGGAACTTCGGTTCAGTTCTCGATATAATTCCACTTGCTGATTCTGTAACTAAGTTAACTGCTCGATGTGAAATCTGCGGGAATCGGGCTTTCTTTACTTTAAGGAAGACGCAAGAAAAAGAGACCGAGCTGATTGGCGGTGCTGATGTGTACATGCCCGTATGTCGACAACATTACGTCAGCGGGCAAGTAGTGATAGAGGCAGCAAGAACTGTAGTAGAATCACGCAAGGTTGAGTGTAGGACTCCAGCATAGTTCTTAGTAGGTAGAGTAGGTCTGGCATCATATACATCCCCAATAGCGAATATCGCAACGTATTATTTGTCCGGACAATTAAGTAAACCAAGGGTCGAGGATGATTTCGGAACTACGGTGAGCATAGTTGTAGGGTTAGGGATATTGTTTTGTTTAATAACTGTAATTGAGTTTGATTATGCCTGTATTTTGATGGCTGCTTTGATTGATTGGATTAGATGGAAGGAAAAAATGAGTCAAATGTTGTATGTAACCAACAAAATTGAAAACTAATACATTATTGGGGGAGGAGACATTCAAAGTGGCAACCATGTGTTTGCTTGGGAAGTTGTTGATCAGCCAGCTGTTGATTTTGTT

Coding sequence (CDS)

ATGAAATCCTTGGTATCTTCCTCCTCTTTCTCGATCCTCTCCCCCTATTTCCCCATTTCTGCTTCTCCATCCTTCTTTTCTTTGCCTTCTAAATCTGCGCAATGCGGCCCTATGTTCACCCAAGTCTCCAATTTTTTCACTTTCAAAACACCCACAACTTCCTTGCCCTCAAAAGGGTTTTTTTCAACCCAGAATCGAAACCCCCAAACGAGGGCCTCTTTGTCTCCGCCCTCCGGCGAGATTCATGTCATTCTGGGGCCGATGTTTGCTGGGAAAACTACCACTCTTCTTCGGCGGATTCAGTCCGAGAGCTGCAATGGCAGAAATGTAGCTATAATTAAGTCGAATAAAGACACAAGGTATGGATTGGATTCTATTGTTACACATGACGGCATGAAACTGCCTTGCTGGGCAATACCAAACTTATCATCATTCAAAAAGAAATTTGGTCAAGGTTCCTATGACAAGCTAGATGTGATTGGAATTGATGAAGCTCAATTTTTCGATGATCTTTATGATTTCTGTTGCGAAGCTGCTGATATTGATGGCAAAACAGTTATAGTTGCTGGGCTGGATGGGGATTACTTGAGCTTTTGTGTTGGGGTCTATACAAAAAACTGA

Protein sequence

MKSLVSSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQVSNFFTFKTPTTSLPSKGFFSTQNRNPQTRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKSNKDTRYGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAADIDGKTVIVAGLDGDYLSFCVGVYTKN*

Homology

[Close]

BLAST of MELO3C025541T2 vs. Swiss-Prot
Match: KITH_ORYSJ (Thymidine kinase OS=Oryza sativa subsp. japonica GN=TK PE=2 SV=2)

HSP 1 Score: 191.8 bits (486), Expect = 7.4e-48
Identity = 90/118 (76.27%), Postives = 102/118 (86.44%), Query Frame = 1


Query: 79  GEIHVILGPMFAGKTTTLLRRIQSESCNG-RNVAIIKSNKDTRYGLDSIVTHDGMKLPCW 138
           GEIHVI+GPMFAGKTT LLRR+Q E+  G RNVA+IKS+KD RYGLDS+VTHDG K+PCW
Sbjct: 67  GEIHVIVGPMFAGKTTALLRRVQVEAGTGSRNVALIKSDKDNRYGLDSVVTHDGTKMPCW 126

Query: 139 AIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAADIDGKTVIVAGLDGDY 196
           A+P LSSF+ K G  +YDK+DVIGIDEAQFFDDL+DFCC+AAD DGK V+VAGLDGDY
Sbjct: 127 ALPELSSFQDKLGTEAYDKVDVIGIDEAQFFDDLHDFCCKAADRDGKIVVVAGLDGDY 184

[Close]

BLAST of MELO3C025541T2 vs. Swiss-Prot
Match: KITHB_ARATH (Thymidine kinase b OS=Arabidopsis thaliana GN=TK1B PE=1 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.3e-46
Identity = 105/202 (51.98%), Postives = 135/202 (66.83%), Query Frame = 1


Query: 1   MKSLVSSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQVSNFFTFKTP-----TTSL 60
           M++L+S S    L+P+      PS FS   + +        ++N     +P     T  L
Sbjct: 6   MRTLISPS----LAPFSLHLHKPSLFSTALRFS------FSINNITPTNSPPSTISTRKL 65

Query: 61  PSKGFFSTQNRNPQTRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKS 120
            +K    T + + Q  +S SP  GEIHV++GPMF+GKTTTLLRRI +E   G+ +AIIKS
Sbjct: 66  QTKATRVTSSSSSQPLSSSSP--GEIHVVVGPMFSGKTTTLLRRILAERETGKRIAIIKS 125

Query: 121 NKDTRYGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYD-KLDVIGIDEAQFFDDLYDF 180
           NKDTRY  +SIVTHDG K PCW++P+LSSFK++FG   Y+ +LDVIGIDEAQFF DLY+F
Sbjct: 126 NKDTRYCTESIVTHDGEKYPCWSLPDLSSFKERFGFDDYENRLDVIGIDEAQFFGDLYEF 185

Query: 181 CCEAADIDGKTVIVAGLDGDYL 197
           C EAAD +GKTVIVAGLDGD++
Sbjct: 186 CREAADKEGKTVIVAGLDGDFM 195

[Close]

BLAST of MELO3C025541T2 vs. Swiss-Prot
Match: KITHA_ARATH (Thymidine kinase a OS=Arabidopsis thaliana GN=TK1A PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.5e-45
Identity = 84/119 (70.59%), Postives = 102/119 (85.71%), Query Frame = 1


Query: 78  SGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKSNKDTRYGLDSIVTHDGMKLPCW 137
           SG +HVI+GPMF+GK+T+LLRRI+SE  +GR+VA++KS+KDTRY  DS+VTHDG+  PCW
Sbjct: 30  SGAVHVIMGPMFSGKSTSLLRRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFPCW 89

Query: 138 AIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAADIDGKTVIVAGLDGDYL 197
           A+P+L SF +KFG  +Y+KLDVIGIDEAQFF DLY+FCC+ AD DGK VIVAGLDGDYL
Sbjct: 90  ALPDLMSFPEKFGLDAYNKLDVIGIDEAQFFGDLYEFCCKVADDDGKIVIVAGLDGDYL 148

[Close]

BLAST of MELO3C025541T2 vs. Swiss-Prot
Match: KITH_SWPVK (Thymidine kinase OS=Swinepox virus (strain Kasza) GN=TK PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.6e-18
Identity = 51/117 (43.59%), Postives = 69/117 (58.97%), Query Frame = 1


Query: 79  GEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKSNKDTRYGLDSIVTHDGMKLPCWA 138
           G IH+ILGPMF+GK+T L+R +        N  +IK +KD RYG D++ THD   +   +
Sbjct: 4   GFIHLILGPMFSGKSTELIRLVNRYQIATYNCRVIKYSKDNRYGNDAVYTHDKCYISAVS 63

Query: 139 IPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAADIDGKTVIVAGLDGDY 196
             +L   K      + D +D++GIDE QFF+D+ +FC   A+  GK VIVA LDG Y
Sbjct: 64  TDSLFDIK-----DTLDDVDIVGIDEGQFFNDIVEFCEYIAN-KGKIVIVAALDGTY 114

[Close]

BLAST of MELO3C025541T2 vs. Swiss-Prot
Match: KITH_YMTV5 (Thymidine kinase OS=Yaba monkey tumor virus (strain VR587) GN=TK PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.4e-16
Identity = 51/119 (42.86%), Postives = 69/119 (57.98%), Query Frame = 1


Query: 78  SGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKSNKDTRYGLDSIVTHDGMKLPCW 137
           SG IH+ILGPMF+GK+T L+R ++          +IK +KD RYG   +VTHD   +P  
Sbjct: 5   SGYIHIILGPMFSGKSTELIRLLKRYQVAMYTCLVIKYSKDERYG-RGLVTHDNDSVPAI 64

Query: 138 AIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAADIDGKTVIVAGLDGDYL 197
            + +L+         +    DVIGIDE QFF D+ +FC   A+ +GK +IVA LDG +L
Sbjct: 65  PVNSLNEI-----NCNDINADVIGIDEGQFFPDIVEFCDYMAN-NGKILIVAALDGTFL 116

[Close]

BLAST of MELO3C025541T2 vs. TrEMBL
Match: A0A0A0LYL4_CUCSA (Thymidine kinase OS=Cucumis sativus GN=Csa_1G181480 PE=3 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 7.8e-105
Identity = 190/196 (96.94%), Postives = 192/196 (97.96%), Query Frame = 1


Query: 1   MKSLVSSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQVSNFFTFKTPTTSLPSKGF 60
           MKS V SSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQ+SNFFTFKTPT SLPSKGF
Sbjct: 73  MKSFVFSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQLSNFFTFKTPTISLPSKGF 132

Query: 61  FSTQNRNPQTRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKSNKDTR 120
           FSTQNRNPQ RASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGR+VAIIKSNKDTR
Sbjct: 133 FSTQNRNPQMRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRSVAIIKSNKDTR 192

Query: 121 YGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAAD 180
           YGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAAD
Sbjct: 193 YGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAAD 252

Query: 181 IDGKTVIVAGLDGDYL 197
           IDGKTVIVAGLDGDYL
Sbjct: 253 IDGKTVIVAGLDGDYL 268

[Close]

BLAST of MELO3C025541T2 vs. TrEMBL
Match: I1L012_SOYBN (Thymidine kinase OS=Glycine max GN=GLYMA_09G011500 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 9.4e-58
Identity = 128/198 (64.65%), Postives = 149/198 (75.25%), Query Frame = 1


Query: 1   MKSLVSSSSFSILSPYFPISASP-SFFSLPSKSAQCGPMFTQVSNFFTFKTPTTSLPSKG 60
           MKSL++   FS LSP     ASP + FSLPS          ++ N      P+    +  
Sbjct: 1   MKSLLNPK-FSALSP----KASPFALFSLPSSRFSFRSNPRRIPNRLLRLNPSPCSSNNF 60

Query: 61  FFSTQNRNPQTRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKSNKDT 120
             + QNR+ QT  S  PPSGEIHVI+GPMFAGKTT+LLRRIQSE+ NGRNVAIIKS+KDT
Sbjct: 61  CCTIQNRSLQTEPS-PPPSGEIHVIVGPMFAGKTTSLLRRIQSETTNGRNVAIIKSSKDT 120

Query: 121 RYGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAA 180
           RYGLDSIVTHDG +LPCWA+ NLSSFK+KFG  +Y+KLDVIGIDEAQFFDDLY+FC +AA
Sbjct: 121 RYGLDSIVTHDGAELPCWALENLSSFKQKFGIDAYEKLDVIGIDEAQFFDDLYEFCLQAA 180

Query: 181 DIDGKTVIVAGLDGDYLS 198
           D DGKTVIVAGLDG+YLS
Sbjct: 181 DHDGKTVIVAGLDGNYLS 192

[Close]

BLAST of MELO3C025541T2 vs. TrEMBL
Match: A0A067LDR5_JATCU (Thymidine kinase OS=Jatropha curcas GN=JCGZ_02929 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.6e-57
Identity = 125/186 (67.20%), Postives = 143/186 (76.88%), Query Frame = 1


Query: 15  PYFPI---SASPSFFSLPSK-SAQCGPMFTQVSNFFTFKTPTTSLPSKGFFSTQNRNPQT 74
           P+ PI   ++S  FFSL SK      P   +  NF   K P    P    F  QNR  Q+
Sbjct: 4   PFSPICRPTSSALFFSLASKYKFLSSPSTLKNVNFLPIKPP----PPVPIFPIQNRCLQS 63

Query: 75  RASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKSNKDTRYGLDSIVTHD 134
           ++S S  SGEIHVI+GPMFAGKTTTLLRRI+SES +GRNVAIIKSNKDTRYGLDSIVTHD
Sbjct: 64  KSSPSSSSGEIHVIVGPMFAGKTTTLLRRIESESRDGRNVAIIKSNKDTRYGLDSIVTHD 123

Query: 135 GMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAADIDGKTVIVAG 194
           G+KLPC A+PNLSSF++KFG  +Y++LDVIGIDEAQFF+DLYDFC EAAD DGKTVIVAG
Sbjct: 124 GLKLPCVALPNLSSFRQKFGADAYEQLDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAG 183

Query: 195 LDGDYL 197
           LDGDYL
Sbjct: 184 LDGDYL 185

[Close]

BLAST of MELO3C025541T2 vs. TrEMBL
Match: I1MFP9_SOYBN (Thymidine kinase OS=Glycine max GN=GLYMA_15G116000 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.6e-57
Identity = 130/202 (64.36%), Postives = 151/202 (74.75%), Query Frame = 1


Query: 1   MKSLVSSSSFSILSPYFPISASP-SFFSLPSKSA-----QCGPMFTQVSNFFTFKTPTTS 60
           MKSL++   FS LSP     ASP + FSLPS+S      +  P   ++ N      P   
Sbjct: 1   MKSLLNPK-FSALSP----KASPFALFSLPSQSTTRFSFRSNPR--RIPNRLLRLNPPPF 60

Query: 61  LPSKGFFSTQNRNPQTRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIK 120
             +    + QNR+ QT  S  PPSGEIHVI+GPMFAGKTT+LLRRIQSE+ NGRNVAIIK
Sbjct: 61  SSNNFICAIQNRSLQTEPS-PPPSGEIHVIVGPMFAGKTTSLLRRIQSETANGRNVAIIK 120

Query: 121 SNKDTRYGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDF 180
           S+KDTRYGLDSIVTHDG KLPCWA+ NLSSFK+KFG  +Y+KLDVIGIDEAQFFDDLY+F
Sbjct: 121 SSKDTRYGLDSIVTHDGAKLPCWALANLSSFKQKFGMDAYEKLDVIGIDEAQFFDDLYEF 180

Query: 181 CCEAADIDGKTVIVAGLDGDYL 197
           C +AAD DGKTVIVAGLDG+YL
Sbjct: 181 CRQAADHDGKTVIVAGLDGNYL 194

[Close]

BLAST of MELO3C025541T2 vs. TrEMBL
Match: A0A0B2REH6_GLYSO (Thymidine kinase OS=Glycine soja GN=glysoja_009947 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.6e-57
Identity = 130/202 (64.36%), Postives = 151/202 (74.75%), Query Frame = 1


Query: 1   MKSLVSSSSFSILSPYFPISASP-SFFSLPSKSA-----QCGPMFTQVSNFFTFKTPTTS 60
           MKSL++   FS LSP     ASP + FSLPS+S      +  P   ++ N      P   
Sbjct: 1   MKSLLNPK-FSALSP----KASPFALFSLPSQSTTRFSFRSNPR--RIPNRLLRLNPPPF 60

Query: 61  LPSKGFFSTQNRNPQTRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIK 120
             +    + QNR+ QT  S  PPSGEIHVI+GPMFAGKTT+LLRRIQSE+ NGRNVAIIK
Sbjct: 61  SSNNFICAIQNRSLQTEPS-PPPSGEIHVIVGPMFAGKTTSLLRRIQSETANGRNVAIIK 120

Query: 121 SNKDTRYGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDF 180
           S+KDTRYGLDSIVTHDG KLPCWA+ NLSSFK+KFG  +Y+KLDVIGIDEAQFFDDLY+F
Sbjct: 121 SSKDTRYGLDSIVTHDGAKLPCWALANLSSFKQKFGMDAYEKLDVIGIDEAQFFDDLYEF 180

Query: 181 CCEAADIDGKTVIVAGLDGDYL 197
           C +AAD DGKTVIVAGLDG+YL
Sbjct: 181 CRQAADHDGKTVIVAGLDGNYL 194

[Close]

BLAST of MELO3C025541T2 vs. TAIR10
Match: AT5G23070.1 (AT5G23070.1 Thymidine kinase)

HSP 1 Score: 185.7 bits (470), Expect = 3.0e-47
Identity = 105/202 (51.98%), Postives = 135/202 (66.83%), Query Frame = 1


Query: 1   MKSLVSSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQVSNFFTFKTP-----TTSL 60
           M++L+S S    L+P+      PS FS   + +        ++N     +P     T  L
Sbjct: 6   MRTLISPS----LAPFSLHLHKPSLFSTALRFS------FSINNITPTNSPPSTISTRKL 65

Query: 61  PSKGFFSTQNRNPQTRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKS 120
            +K    T + + Q  +S SP  GEIHV++GPMF+GKTTTLLRRI +E   G+ +AIIKS
Sbjct: 66  QTKATRVTSSSSSQPLSSSSP--GEIHVVVGPMFSGKTTTLLRRILAERETGKRIAIIKS 125

Query: 121 NKDTRYGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYD-KLDVIGIDEAQFFDDLYDF 180
           NKDTRY  +SIVTHDG K PCW++P+LSSFK++FG   Y+ +LDVIGIDEAQFF DLY+F
Sbjct: 126 NKDTRYCTESIVTHDGEKYPCWSLPDLSSFKERFGFDDYENRLDVIGIDEAQFFGDLYEF 185

Query: 181 CCEAADIDGKTVIVAGLDGDYL 197
           C EAAD +GKTVIVAGLDGD++
Sbjct: 186 CREAADKEGKTVIVAGLDGDFM 195

[Close]

BLAST of MELO3C025541T2 vs. TAIR10
Match: AT3G07800.1 (AT3G07800.1 Thymidine kinase)

HSP 1 Score: 184.1 bits (466), Expect = 8.7e-47
Identity = 84/119 (70.59%), Postives = 102/119 (85.71%), Query Frame = 1


Query: 78  SGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKSNKDTRYGLDSIVTHDGMKLPCW 137
           SG +HVI+GPMF+GK+T+LLRRI+SE  +GR+VA++KS+KDTRY  DS+VTHDG+  PCW
Sbjct: 30  SGAVHVIMGPMFSGKSTSLLRRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFPCW 89

Query: 138 AIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAADIDGKTVIVAGLDGDYL 197
           A+P+L SF +KFG  +Y+KLDVIGIDEAQFF DLY+FCC+ AD DGK VIVAGLDGDYL
Sbjct: 90  ALPDLMSFPEKFGLDAYNKLDVIGIDEAQFFGDLYEFCCKVADDDGKIVIVAGLDGDYL 148

[Close]

BLAST of MELO3C025541T2 vs. NCBI nr
Match: gi|659127259|ref|XP_008463610.1| (PREDICTED: thymidine kinase-like [Cucumis melo])

HSP 1 Score: 399.4 bits (1025), Expect = 3.7e-108
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1


Query: 1   MKSLVSSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQVSNFFTFKTPTTSLPSKGF 60
           MKSLVSSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQVSNFFTFKTPTTSLPSKGF
Sbjct: 1   MKSLVSSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQVSNFFTFKTPTTSLPSKGF 60

Query: 61  FSTQNRNPQTRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKSNKDTR 120
           FSTQNRNPQTRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKSNKDTR
Sbjct: 61  FSTQNRNPQTRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKSNKDTR 120

Query: 121 YGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAAD 180
           YGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAAD
Sbjct: 121 YGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAAD 180

Query: 181 IDGKTVIVAGLDGDYL 197
           IDGKTVIVAGLDGDYL
Sbjct: 181 IDGKTVIVAGLDGDYL 196

[Close]

BLAST of MELO3C025541T2 vs. NCBI nr
Match: gi|778659746|ref|XP_011654956.1| (PREDICTED: thymidine kinase [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 1.1e-104
Identity = 190/196 (96.94%), Postives = 192/196 (97.96%), Query Frame = 1


Query: 1   MKSLVSSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQVSNFFTFKTPTTSLPSKGF 60
           MKS V SSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQ+SNFFTFKTPT SLPSKGF
Sbjct: 1   MKSFVFSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQLSNFFTFKTPTISLPSKGF 60

Query: 61  FSTQNRNPQTRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKSNKDTR 120
           FSTQNRNPQ RASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGR+VAIIKSNKDTR
Sbjct: 61  FSTQNRNPQMRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRSVAIIKSNKDTR 120

Query: 121 YGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAAD 180
           YGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAAD
Sbjct: 121 YGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAAD 180

Query: 181 IDGKTVIVAGLDGDYL 197
           IDGKTVIVAGLDGDYL
Sbjct: 181 IDGKTVIVAGLDGDYL 196

[Close]

BLAST of MELO3C025541T2 vs. NCBI nr
Match: gi|700209940|gb|KGN65036.1| (Thymidine kinase [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 1.1e-104
Identity = 190/196 (96.94%), Postives = 192/196 (97.96%), Query Frame = 1


Query: 1   MKSLVSSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQVSNFFTFKTPTTSLPSKGF 60
           MKS V SSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQ+SNFFTFKTPT SLPSKGF
Sbjct: 73  MKSFVFSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQLSNFFTFKTPTISLPSKGF 132

Query: 61  FSTQNRNPQTRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKSNKDTR 120
           FSTQNRNPQ RASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGR+VAIIKSNKDTR
Sbjct: 133 FSTQNRNPQMRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRSVAIIKSNKDTR 192

Query: 121 YGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAAD 180
           YGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAAD
Sbjct: 193 YGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAAD 252

Query: 181 IDGKTVIVAGLDGDYL 197
           IDGKTVIVAGLDGDYL
Sbjct: 253 IDGKTVIVAGLDGDYL 268

[Close]

BLAST of MELO3C025541T2 vs. NCBI nr
Match: gi|359497110|ref|XP_002266298.2| (PREDICTED: thymidine kinase-like isoform X2 [Vitis vinifera])

HSP 1 Score: 234.6 bits (597), Expect = 1.6e-58
Identity = 127/197 (64.47%), Postives = 149/197 (75.63%), Query Frame = 1


Query: 1   MKSLVSSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQVSNFFTFKTPTTSL-PSKG 60
           MKSL+S S FS LSP+   + S S + L SKS  C     +  +    K+  +S+ P   
Sbjct: 4   MKSLLSPS-FSTLSPHLTKTTSFSLYFLASKSILCNSQILKNPDCLHIKSTISSMKPLMS 63

Query: 61  FFSTQNRNPQTRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKSNKDT 120
             S Q+R  Q  AS S  SGEIHVI+GPMF+GKTTTLLRRIQSE+ NGR VAIIKSNKDT
Sbjct: 64  SNSIQSRRFQIEASQSS-SGEIHVIVGPMFSGKTTTLLRRIQSETSNGRKVAIIKSNKDT 123

Query: 121 RYGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAA 180
           RYGLDSIVTHDG+KLPCWA+ +LSSF++K G  +YD+LDVIGIDEAQFF DLY+FCC+AA
Sbjct: 124 RYGLDSIVTHDGVKLPCWALADLSSFREKLGSDAYDELDVIGIDEAQFFGDLYEFCCKAA 183

Query: 181 DIDGKTVIVAGLDGDYL 197
           D DGKTVIVAGLDGDYL
Sbjct: 184 DHDGKTVIVAGLDGDYL 198

[Close]

BLAST of MELO3C025541T2 vs. NCBI nr
Match: gi|1021508407|ref|XP_016197554.1| (PREDICTED: thymidine kinase a-like [Arachis ipaensis])

HSP 1 Score: 234.2 bits (596), Expect = 2.1e-58
Identity = 130/198 (65.66%), Postives = 149/198 (75.25%), Query Frame = 1


Query: 1   MKSLVSSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQVSNFFTFKT-PTTSLPSKG 60
           MKS+++   FS LSP+ P ++  S FS P  S     +F + S    F +   T   S  
Sbjct: 1   MKSILNPK-FSALSPHLPKTSPFSLFSRPHDS-----IFRKNSQQLPFPSLKATPFSSNS 60

Query: 61  FFS-TQNRNPQTRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKSNKD 120
           F S  QNR  QT  +  PPSGEIHVI+GPMFAGKTTTLLRRIQSES N +NVAIIKS+KD
Sbjct: 61  FLSRAQNRTLQTEPT-RPPSGEIHVIVGPMFAGKTTTLLRRIQSESANSKNVAIIKSSKD 120

Query: 121 TRYGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEA 180
           TRYGLDSIVTHDG KLPCWA+ NLSSFK+KFG  +Y+KLDVIGIDEAQFF+DLYDFC EA
Sbjct: 121 TRYGLDSIVTHDGAKLPCWALTNLSSFKQKFGIEAYEKLDVIGIDEAQFFEDLYDFCREA 180

Query: 181 ADIDGKTVIVAGLDGDYL 197
           AD DGKTVIVAGLDG+YL
Sbjct: 181 ADHDGKTVIVAGLDGNYL 191

The following BLAST results are available for this feature:

BLAST of MELO3C025541T2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
KITH_ORYSJ	7.4e-48	76.27	Thymidine kinase OS=Oryza sativa subsp. japonica GN=TK PE=2 SV=2	[more]
KITHB_ARATH	5.3e-46	51.98	Thymidine kinase b OS=Arabidopsis thaliana GN=TK1B PE=1 SV=1	[more]
KITHA_ARATH	1.5e-45	70.59	Thymidine kinase a OS=Arabidopsis thaliana GN=TK1A PE=1 SV=1	[more]
KITH_SWPVK	1.6e-18	43.59	Thymidine kinase OS=Swinepox virus (strain Kasza) GN=TK PE=3 SV=1	[more]
KITH_YMTV5	4.4e-16	42.86	Thymidine kinase OS=Yaba monkey tumor virus (strain VR587) GN=TK PE=3 SV=1	[more]

BLAST of MELO3C025541T2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYL4_CUCSA	7.8e-105	96.94	Thymidine kinase OS=Cucumis sativus GN=Csa_1G181480 PE=3 SV=1	[more]
I1L012_SOYBN	9.4e-58	64.65	Thymidine kinase OS=Glycine max GN=GLYMA_09G011500 PE=3 SV=1	[more]
A0A067LDR5_JATCU	1.6e-57	67.20	Thymidine kinase OS=Jatropha curcas GN=JCGZ_02929 PE=3 SV=1	[more]
I1MFP9_SOYBN	1.6e-57	64.36	Thymidine kinase OS=Glycine max GN=GLYMA_15G116000 PE=3 SV=1	[more]
A0A0B2REH6_GLYSO	1.6e-57	64.36	Thymidine kinase OS=Glycine soja GN=glysoja_009947 PE=3 SV=1	[more]

BLAST of MELO3C025541T2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23070.1	3.0e-47	51.98	Thymidine kinase	[more]
AT3G07800.1	8.7e-47	70.59	Thymidine kinase	[more]

BLAST of MELO3C025541T2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659127259\|ref\|XP_008463610.1\|	3.7e-108	100.00	PREDICTED: thymidine kinase-like [Cucumis melo]	[more]
gi\|778659746\|ref\|XP_011654956.1\|	1.1e-104	96.94	PREDICTED: thymidine kinase [Cucumis sativus]	[more]
gi\|700209940\|gb\|KGN65036.1\|	1.1e-104	96.94	Thymidine kinase [Cucumis sativus]	[more]
gi\|359497110\|ref\|XP_002266298.2\|	1.6e-58	64.47	PREDICTED: thymidine kinase-like isoform X2 [Vitis vinifera]	[more]
gi\|1021508407\|ref\|XP_016197554.1\|	2.1e-58	65.66	PREDICTED: thymidine kinase a-like [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001267	Thymidine_kinase
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0004797	thymidine kinase activity
GO:0005524	ATP binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006230	TMP biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004797	thymidine kinase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C025541	MELO3C025541	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C025541T2	MELO3C025541T2-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C025541T2.cds4	MELO3C025541T2.cds4	CDS
MELO3C025541T2.cds3	MELO3C025541T2.cds3	CDS
MELO3C025541T2.cds2	MELO3C025541T2.cds2	CDS
MELO3C025541T2.cds1	MELO3C025541T2.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001267	Thymidine kinase	PANTHER	PTHR11441	THYMIDINE KINASE	coord: 65..196 score: 5.5
IPR001267	Thymidine kinase	PFAM	PF00265	TK	coord: 79..195 score: 1.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 79..197 score: 1.66
None	No IPR available	PANTHER	PTHR11441:SF2	THYMIDINE KINASE	coord: 65..196 score: 5.5