MELO3C025005T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C025005T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	ATP synthase delta-subunit protein
Location	chr3 : 17129772 .. 17130840 (-)
Sequence length	1069

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTACCACAAAAAAATAATTCCTCCCATCCCCAAAACCCACAAAGTACTCAAATCCCTCACCGGACTCGTCATCAATGGCCGCTCTTCACCAAACCGCCGCCTCTCTTCAGGCCAAGCTCCTTCCAACCGCTCGAATCTCCCGAACCACTCCCGTAAACCTCTCCTTCTCTGCCACTTTTCCTTCTCGCGGACTCCGCCTCGGCCAACACCGCTCTCACGGCGGCGCAAGAATGTCGGCCACAGCCGCCGGAAGCTACGCTGCAGCACTAGCCGAAGTGGCAGCGTCGAACAACACACTTGACGCCACAAGCAGTGACGTGGAGAAGATTGAGAGCGTGTTCGCGGATCCACAGGTGTTGGATTTCTTCTCGAATCCAACGATTAGCGTGGAGAAGAAACAAGCAGTGGTGGACGAAATCGCTTCTTCGTCCTCTCTACAGCCGCATTCAGCGAATTTCTTGAAGATCTTGGTGGATGCGAAGAGAATCGACATCCTGAAGGAGATAGTTACGGAGTTTGAATTGGTGTATAACAAGATAACGAACACGGAACTTGCGGTGGTGAGTTCGGTTGTACAATTGGAGCAGCAACATTTGGCACAAATCGCGAAACAGGTGCAGAAATTGAGTGGAGCAAAGAATGTGAGGATAAAGACGCAGATTGATCCAAGTTTGGTGGCTGGATTCACAGTCAGGTTTGGGAATTCTGGATCCAAACTCATTGATTTGAGTGTTAAGAAACAGCTTGAGGAAATTGCTGCTCAGCTTGATCTTGGCAATATTCAACTGGCTGTATGAAATTGAATTGCAAGTGCATTTTGTGATTTTTATTTTATTTTTTGTTGAGTGGTAATTAATAATTATTGGTACTATATATATATATATATATATATATATGCAATATATATTTGGTGTACTTTATTGGAATTGCTTGGAATCCTTAATTTTGTAATTTTGTAATTTTGTAAATTCCTGGCTGTAAGGTCATGTTTGTTGGAAATGGAACCAATCATACTTTGTATAATTTAAGCATAATTGCACAATAAGAATAAGGAGCTTAAGTCACT

mRNA sequence

AATTTACCACAAAAAAATAATTCCTCCCATCCCCAAAACCCACAAAGTACTCAAATCCCTCACCGGACTCGTCATCAATGGCCGCTCTTCACCAAACCGCCGCCTCTCTTCAGGCCAAGCTCCTTCCAACCGCTCGAATCTCCCGAACCACTCCCGTAAACCTCTCCTTCTCTGCCACTTTTCCTTCTCGCGGACTCCGCCTCGGCCAACACCGCTCTCACGGCGGCGCAAGAATGTCGGCCACAGCCGCCGGAAGCTACGCTGCAGCACTAGCCGAAGTGGCAGCGTCGAACAACACACTTGACGCCACAAGCAGTGACGTGGAGAAGATTGAGAGCGTGTTCGCGGATCCACAGGTGTTGGATTTCTTCTCGAATCCAACGATTAGCGTGGAGAAGAAACAAGCAGTGGTGGACGAAATCGCTTCTTCGTCCTCTCTACAGCCGCATTCAGCGAATTTCTTGAAGATCTTGGTGGATGCGAAGAGAATCGACATCCTGAAGGAGATAGTTACGGAGTTTGAATTGGTGTATAACAAGATAACGAACACGGAACTTGCGGTGGTGAGTTCGGTTGTACAATTGGAGCAGCAACATTTGGCACAAATCGCGAAACAGGTGCAGAAATTGAGTGGAGCAAAGAATGTGAGGATAAAGACGCAGATTGATCCAAGTTTGGTGGCTGGATTCACAGTCAGGTTTGGGAATTCTGGATCCAAACTCATTGATTTGAGTGTTAAGAAACAGCTTGAGGAAATTGCTGCTCAGCTTGATCTTGGCAATATTCAACTGGCTGTATGAAATTGAATTGCAAGTGCATTTTGTGATTTTTATTTTATTTTTTGTTGAGTGGTAATTAATAATTATTGGTACTATATATATATATATATATATATATATGCAATATATATTTGGTGTACTTTATTGGAATTGCTTGGAATCCTTAATTTTGTAATTTTGTAATTTTGTAAATTCCTGGCTGTAAGGTCATGTTTGTTGGAAATGGAACCAATCATACTTTGTATAATTTAAGCATAATTGCACAATAAGAATAAGGAGCTTAAGTCACT

Coding sequence (CDS)

ATGGCCGCTCTTCACCAAACCGCCGCCTCTCTTCAGGCCAAGCTCCTTCCAACCGCTCGAATCTCCCGAACCACTCCCGTAAACCTCTCCTTCTCTGCCACTTTTCCTTCTCGCGGACTCCGCCTCGGCCAACACCGCTCTCACGGCGGCGCAAGAATGTCGGCCACAGCCGCCGGAAGCTACGCTGCAGCACTAGCCGAAGTGGCAGCGTCGAACAACACACTTGACGCCACAAGCAGTGACGTGGAGAAGATTGAGAGCGTGTTCGCGGATCCACAGGTGTTGGATTTCTTCTCGAATCCAACGATTAGCGTGGAGAAGAAACAAGCAGTGGTGGACGAAATCGCTTCTTCGTCCTCTCTACAGCCGCATTCAGCGAATTTCTTGAAGATCTTGGTGGATGCGAAGAGAATCGACATCCTGAAGGAGATAGTTACGGAGTTTGAATTGGTGTATAACAAGATAACGAACACGGAACTTGCGGTGGTGAGTTCGGTTGTACAATTGGAGCAGCAACATTTGGCACAAATCGCGAAACAGGTGCAGAAATTGAGTGGAGCAAAGAATGTGAGGATAAAGACGCAGATTGATCCAAGTTTGGTGGCTGGATTCACAGTCAGGTTTGGGAATTCTGGATCCAAACTCATTGATTTGAGTGTTAAGAAACAGCTTGAGGAAATTGCTGCTCAGCTTGATCTTGGCAATATTCAACTGGCTGTATGA

Protein sequence

MAALHQTAASLQAKLLPTARISRTTPVNLSFSATFPSRGLRLGQHRSHGGARMSATAAGSYAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKKQAVVDEIASSSSLQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQLAV*

Homology

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BLAST of MELO3C025005T1 vs. Swiss-Prot
Match: ATPD_ARATH (ATP synthase subunit delta, chloroplastic OS=Arabidopsis thaliana GN=ATPD PE=1 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.3e-75
Identity = 153/240 (63.75%), Postives = 193/240 (80.42%), Query Frame = 1


Query: 1   MAALHQTAASLQAKLLPTA-RISRTTPVNLSFSATFPSRGLRLGQHRSHGGARMSATAAG 60
           MA+L QT  SLQ+KL P++ +I+R+ P+      TFP   +R+    +  GARMSATAA 
Sbjct: 1   MASLQQTLFSLQSKLPPSSFQIARSLPLR----KTFP---IRINNGGNAAGARMSATAAS 60

Query: 61  SYAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKKQAVVDEIASSS 120
           SYA ALA+VA  N+T++ T +D+EK+E VF+DPQVL+FF+NPTI+VEKK+ V+D+I  SS
Sbjct: 61  SYAMALADVAKRNDTMELTVTDIEKLEQVFSDPQVLNFFANPTITVEKKRQVIDDIVKSS 120

Query: 121 SLQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIAK 180
           SLQ H++NFL +LVDA RI+I+ EIV EFELVYNK+T+T+LA V SVV+LE   LAQIAK
Sbjct: 121 SLQSHTSNFLNVLVDANRINIVTEIVKEFELVYNKLTDTQLAEVRSVVKLEAPQLAQIAK 180

Query: 181 QVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQLA 240
           QVQKL+GAKNVR+KT ID SLVAGFT+R+G SGSKLID+SVKKQLE+IA+QL+LG IQLA
Sbjct: 181 QVQKLTGAKNVRVKTVIDASLVAGFTIRYGESGSKLIDMSVKKQLEDIASQLELGEIQLA 233

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BLAST of MELO3C025005T1 vs. Swiss-Prot
Match: ATPD_TOBAC (ATP synthase delta chain, chloroplastic OS=Nicotiana tabacum GN=ATPD PE=2 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.2e-71
Identity = 146/248 (58.87%), Postives = 186/248 (75.00%), Query Frame = 1


Query: 1   MAALHQTAASLQAKLLPTARISRTTPVNLSFSA--TFPSRGLRLGQHRSH------GGAR 60
           MAAL QT  + Q++  P  +I       LSFS     P   ++L  +R+        G++
Sbjct: 1   MAALQQTPITFQSRSPPPTQIISGPTAKLSFSGGLKLPKLTIKLRSNRTSRRGGGAAGSK 60

Query: 61  MSATAAGSYAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKKQAVV 120
           M A+AAGSYA ALA++A SN TL+ T++D+EKIE +  D  V +FF +P +  EKK+ +V
Sbjct: 61  MVASAAGSYANALADIAKSNGTLEQTTADLEKIEKISDDEAVFNFFVSPIVGEEKKRELV 120

Query: 121 DEIASSSSLQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQ 180
           DEI SSSS+QPH ANFL ILVD KR++++KEIV EFE VYN +T+TELAVV+SVV+LE Q
Sbjct: 121 DEIVSSSSIQPHVANFLNILVDMKRVELIKEIVKEFEKVYNTLTDTELAVVTSVVKLESQ 180

Query: 181 HLAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLD 240
           HLAQIAK VQ+L+G+KNVRIKT ID SLVAGFT+R+GNSGSKLID+SVKKQLE+IAAQL+
Sbjct: 181 HLAQIAKGVQRLTGSKNVRIKTVIDESLVAGFTIRYGNSGSKLIDMSVKKQLEDIAAQLE 240

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BLAST of MELO3C025005T1 vs. Swiss-Prot
Match: ATPD_PEA (ATP synthase delta chain, chloroplastic OS=Pisum sativum GN=ATPD PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.2e-70
Identity = 147/252 (58.33%), Postives = 191/252 (75.79%), Query Frame = 1


Query: 1   MAALHQTAASLQAKLLP--TARISRTTPVNLSFSATFPSRGLRLG-------QHRSHGGA 60
           MA+L  T ASL +K +P  T  ++R   +NLS S+TF S  L+L          RS GGA
Sbjct: 1   MASLQHTTASLHSKHIPKTTNILTRKPILNLS-SSTFYSPKLKLKLKLPLTKTRRSTGGA 60

Query: 61  ---RMSATAAGSYAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKK 120
              RMS+ AAGSYAAALA++A SNNTLDA ++D +KIE +F+DP+V D+FS+P +    K
Sbjct: 61  LGARMSSLAAGSYAAALADLANSNNTLDAITADFDKIEQLFSDPKVFDYFSSPIVEDSTK 120

Query: 121 QAVVDEIASSSSLQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQ 180
           + ++ E A++S  QPH+ NFL +L+D+KRID++ +I+ EFE VYN +T+TEL VV+SVV+
Sbjct: 121 RQLIGEFATTSGFQPHTHNFLNVLIDSKRIDMIIDIIKEFEFVYNTLTDTELVVVTSVVK 180

Query: 181 LEQQHLAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIA 240
           LE  HLAQIAKQVQKL+GAK VR KT +DPSLVAGFTVR+GN+GSK ID+SVK++LEEIA
Sbjct: 181 LESHHLAQIAKQVQKLTGAKKVRTKTLLDPSLVAGFTVRYGNTGSKFIDMSVKRKLEEIA 240

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BLAST of MELO3C025005T1 vs. Swiss-Prot
Match: ATPD_SPIOL (ATP synthase delta chain, chloroplastic OS=Spinacia oleracea GN=ATPD PE=1 SV=2)

HSP 1 Score: 245.7 bits (626), Expect = 5.0e-64
Identity = 136/249 (54.62%), Postives = 181/249 (72.69%), Query Frame = 1


Query: 3   ALHQTAASLQAKLLPTARISRTTPVNLSFS---ATFPSRGLRLGQH-----RSHGGA--- 62
           AL     +  A L  ++  S   P +LSFS   ATF    L++        +  GGA   
Sbjct: 9   ALQSRTTTAVAALSTSSTTSTPKPFSLSFSSSTATFNPLRLKILTASKLTAKPRGGALGT 68

Query: 63  RMSATAAGSYAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKKQAV 122
           RM  + A  YA+ALA+VA    TL+AT+SDVEK+  +F++  V  FF+NP IS++ K++V
Sbjct: 69  RMVDSTASRYASALADVADVTGTLEATNSDVEKLIRIFSEEPVYYFFANPVISIDNKRSV 128

Query: 123 VDEIASSSSLQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQ 182
           +DEI ++S LQPH+ANF+ IL+D++RI+++KEI+ EFE V+NKIT TE+AVV+SVV+LE 
Sbjct: 129 LDEIITTSGLQPHTANFINILIDSERINLVKEILNEFEDVFNKITGTEVAVVTSVVKLEN 188

Query: 183 QHLAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQL 241
            HLAQIAK VQK++GAKNVRIKT IDPSLVAGFT+R+GN GSKL+D+SVKKQLEEIAAQL
Sbjct: 189 DHLAQIAKGVQKITGAKNVRIKTVIDPSLVAGFTIRYGNEGSKLVDMSVKKQLEEIAAQL 248

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BLAST of MELO3C025005T1 vs. Swiss-Prot
Match: ATPD_SORBI (ATP synthase delta chain, chloroplastic OS=Sorghum bicolor GN=ATPD PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.3e-56
Identity = 123/247 (49.80%), Postives = 163/247 (65.99%), Query Frame = 1


Query: 1   MAALHQTAASLQAKLLPTARISRTTPVNLSFSATFP--SRGL---RLGQHRSHGGA--RM 60
           MAAL   + +L+      A  S         SA+F   +RGL   RL   R  G      
Sbjct: 1   MAALRLASFTLRPAAAAAASASSGATPAAPRSASFARAARGLPSLRLAPPRRRGDLVRPR 60

Query: 61  SATAAGSYAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKKQAVVD 120
           +  AA SYA+AL+EVA  N TL+ T SD+EK++ +FAD  V +FF NPT+  E+K A++D
Sbjct: 61  AEAAADSYASALSEVAVENGTLEQTVSDLEKLQKIFADETVAEFFDNPTVPREEKTALID 120

Query: 121 EIASSSSLQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQH 180
           EIA S  LQPH  NF+ ++VD  R  IL EIV EFE ++N +T TE+A V+SVVQLE Q 
Sbjct: 121 EIAKSYELQPHVVNFINVVVDNFRATILPEIVVEFENIFNSLTGTEVATVTSVVQLESQD 180

Query: 181 LAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDL 240
           LAQIA+ VQK++GAKNVR+KTQ+DP L+AGFTV++G  GS LID+SV+KQ+EEI ++ +L
Sbjct: 181 LAQIAQHVQKMTGAKNVRLKTQLDPELIAGFTVQYGRDGSSLIDMSVRKQIEEITSEFEL 240

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BLAST of MELO3C025005T1 vs. TrEMBL
Match: A0A0A0K7Z3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016970 PE=3 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 5.0e-119
Identity = 233/240 (97.08%), Postives = 236/240 (98.33%), Query Frame = 1


Query: 1   MAALHQTAASLQAKLLPTARISRTTPVNLSFSATFPSRGLRLGQHRSHGGARMSATAAGS 60
           MAALHQT ASLQAKLLPTARISRTTPVNLSFSATFPSRGLRL QHRSHGGARMSATAAGS
Sbjct: 1   MAALHQTTASLQAKLLPTARISRTTPVNLSFSATFPSRGLRLVQHRSHGGARMSATAAGS 60

Query: 61  YAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKKQAVVDEIASSSS 120
           YAAALAEVAASNNTLDATSSDVEKIESVFAD +V DFF+NPTISVEKKQAVVDE+ASSSS
Sbjct: 61  YAAALAEVAASNNTLDATSSDVEKIESVFADQRVFDFFANPTISVEKKQAVVDEMASSSS 120

Query: 121 LQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIAKQ 180
           LQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIAKQ
Sbjct: 121 LQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIAKQ 180

Query: 181 VQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQLAV 240
           VQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQLAV
Sbjct: 181 VQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQLAV 240

[Close]

BLAST of MELO3C025005T1 vs. TrEMBL
Match: A0A0D2NHU9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G037600 PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.1e-89
Identity = 182/242 (75.21%), Postives = 212/242 (87.60%), Query Frame = 1


Query: 1   MAALHQTAASLQAKLLPTARISRTTP-VNLSFSATFPSRGLRLGQHRS-HGGARMSATAA 60
           MA+L Q + SLQ KLL +++  R+ P +NLSFSATFPS  L+L   R  HGGA+MSA+AA
Sbjct: 1   MASLQQASISLQPKLLSSSQHPRSLPSLNLSFSATFPS--LKLSTTRPLHGGAKMSASAA 60

Query: 61  GSYAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKKQAVVDEIASS 120
            SYA ALA+VA SNNTLDATSSDVEK+E +F+DPQVL FF+NPTI V KK+ V+DEI SS
Sbjct: 61  SSYATALADVAKSNNTLDATSSDVEKVEKIFSDPQVLQFFTNPTIDVLKKRQVLDEIVSS 120

Query: 121 SSLQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIA 180
           S LQPH+ANFL ILVDAKRID++KEIV EFELVYN++T+TELAVVSSVV+LE QHLAQIA
Sbjct: 121 SELQPHTANFLNILVDAKRIDLIKEIVKEFELVYNELTDTELAVVSSVVKLESQHLAQIA 180

Query: 181 KQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQL 240
           KQVQKL+GAKNVRIKT IDPSLVAGFT+R+G+SGSKLID+SVKKQLEEIAAQLDLG+IQL
Sbjct: 181 KQVQKLTGAKNVRIKTMIDPSLVAGFTIRYGSSGSKLIDMSVKKQLEEIAAQLDLGDIQL 240

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BLAST of MELO3C025005T1 vs. TrEMBL
Match: A0A067JS97_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01954 PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.8e-89
Identity = 183/247 (74.09%), Postives = 213/247 (86.23%), Query Frame = 1


Query: 1   MAALHQTAASLQAKLLPTARISRTT----PVNLSFSATFPSRGLR-LGQHRSHGG----A 60
           MAAL  T  SLQ+K+ P+AR+S+T     P++LSFS+TFPS  L     HR+ GG    A
Sbjct: 1   MAALQNTPISLQSKIPPSARLSKTLSSQKPLSLSFSSTFPSFNLSSTTAHRARGGGATGA 60

Query: 61  RMSATAAGSYAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKKQAV 120
           +MSATAA SYAAALA+VA SNNTLD+T++D+EKIE +F+DPQV+DFFSNPTISVEKK+ V
Sbjct: 61  KMSATAAASYAAALADVAKSNNTLDSTAADIEKIEKLFSDPQVVDFFSNPTISVEKKREV 120

Query: 121 VDEIASSSSLQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQ 180
           VDEIA S +LQPH+ANFL IL+DAKRID+ KEIV EFELVYNKIT+TELA V+SVV+LE 
Sbjct: 121 VDEIAKSLALQPHTANFLNILIDAKRIDLAKEIVKEFELVYNKITDTELATVTSVVKLES 180

Query: 181 QHLAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQL 239
           QHLAQIAKQVQKL+GAKNVRIKT IDPSLVAGFTVRFG+SGSKLIDLSVKKQLEEIAAQL
Sbjct: 181 QHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTVRFGSSGSKLIDLSVKKQLEEIAAQL 240

[Close]

BLAST of MELO3C025005T1 vs. TrEMBL
Match: A0A061F8S8_THECC (ATP synthase delta-subunit protein OS=Theobroma cacao GN=TCM_032365 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 7.0e-89
Identity = 178/242 (73.55%), Postives = 210/242 (86.78%), Query Frame = 1


Query: 1   MAALHQTAASLQAKLLPTARISRTTP-VNLSFSATFPSRGLRLGQHRS-HGGARMSATAA 60
           MA+  QT+ SLQ+KLLP++++ R  P +NLSFSATFPS  L+L   R   GGA+MSATAA
Sbjct: 1   MASFQQTSISLQSKLLPSSQLPRALPSLNLSFSATFPS--LKLSTTRPLQGGAKMSATAA 60

Query: 61  GSYAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKKQAVVDEIASS 120
            SYA ALA+VA SNNTLD+TSSD+E++E +F+DPQV+DFF+NPTI   KK+ V+D+I  S
Sbjct: 61  SSYALALADVAKSNNTLDSTSSDIEQVEKIFSDPQVIDFFANPTIDAIKKRQVLDDIVKS 120

Query: 121 SSLQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIA 180
           S LQPH+ANFL ILVDAKRIDI+KEIV EFE V+NK+T+TELAVVSSVV LE QHLAQIA
Sbjct: 121 SGLQPHTANFLNILVDAKRIDIIKEIVKEFESVFNKLTDTELAVVSSVVPLESQHLAQIA 180

Query: 181 KQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQL 240
           KQVQKL+GAKNVRIKT IDPSLVAGFT+R+GNSGSKLID+SVKKQLEEIAAQLDLG+IQL
Sbjct: 181 KQVQKLTGAKNVRIKTAIDPSLVAGFTIRYGNSGSKLIDMSVKKQLEEIAAQLDLGDIQL 240

[Close]

BLAST of MELO3C025005T1 vs. TrEMBL
Match: A0A059BZG6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04149 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 5.7e-83
Identity = 169/245 (68.98%), Postives = 200/245 (81.63%), Query Frame = 1


Query: 1   MAALHQTAASLQAKLLPTARISRTTPVNLSFSATFPS-----RGLRLGQHRSHGGARMSA 60
           MAAL Q   SLQ+K+          P NLSFSATFPS       L L    +  GARMSA
Sbjct: 1   MAALQQIPISLQSKIPSLKTQFLHKPSNLSFSATFPSLKLAPAHLHLRPSSAASGARMSA 60

Query: 61  TAAGSYAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKKQAVVDEI 120
           TA GSYAAALA+VA SNNTLDATS+DVEKIE +F+D  V  FFSNPT+ +EKK+ +VDEI
Sbjct: 61  TAGGSYAAALADVAKSNNTLDATSADVEKIEKIFSDEGVFKFFSNPTVDLEKKRGMVDEI 120

Query: 121 ASSSSLQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLA 180
           ++SS LQPH+ANFL IL++AKRID++K+IV EFE+VYN++T TELA+VSSVV+LE QHLA
Sbjct: 121 SASSGLQPHTANFLNILIEAKRIDLIKDIVKEFEMVYNRLTETELALVSSVVKLEPQHLA 180

Query: 181 QIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGN 240
           QIAKQVQKL+GAKNVRIKT IDPSLVAGFT+R+G+SGSKLID+SVKKQLE+IA QLDLG+
Sbjct: 181 QIAKQVQKLTGAKNVRIKTAIDPSLVAGFTIRYGSSGSKLIDMSVKKQLEDIAEQLDLGD 240

[Close]

BLAST of MELO3C025005T1 vs. TAIR10
Match: AT4G09650.1 (AT4G09650.1 ATP synthase delta-subunit gene)

HSP 1 Score: 284.3 bits (726), Expect = 7.2e-77
Identity = 153/240 (63.75%), Postives = 193/240 (80.42%), Query Frame = 1


Query: 1   MAALHQTAASLQAKLLPTA-RISRTTPVNLSFSATFPSRGLRLGQHRSHGGARMSATAAG 60
           MA+L QT  SLQ+KL P++ +I+R+ P+      TFP   +R+    +  GARMSATAA 
Sbjct: 1   MASLQQTLFSLQSKLPPSSFQIARSLPLR----KTFP---IRINNGGNAAGARMSATAAS 60

Query: 61  SYAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKKQAVVDEIASSS 120
           SYA ALA+VA  N+T++ T +D+EK+E VF+DPQVL+FF+NPTI+VEKK+ V+D+I  SS
Sbjct: 61  SYAMALADVAKRNDTMELTVTDIEKLEQVFSDPQVLNFFANPTITVEKKRQVIDDIVKSS 120

Query: 121 SLQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIAK 180
           SLQ H++NFL +LVDA RI+I+ EIV EFELVYNK+T+T+LA V SVV+LE   LAQIAK
Sbjct: 121 SLQSHTSNFLNVLVDANRINIVTEIVKEFELVYNKLTDTQLAEVRSVVKLEAPQLAQIAK 180

Query: 181 QVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQLA 240
           QVQKL+GAKNVR+KT ID SLVAGFT+R+G SGSKLID+SVKKQLE+IA+QL+LG IQLA
Sbjct: 181 QVQKLTGAKNVRVKTVIDASLVAGFTIRYGESGSKLIDMSVKKQLEDIASQLELGEIQLA 233

[Close]

BLAST of MELO3C025005T1 vs. NCBI nr
Match: gi|659126215|ref|XP_008463069.1| (PREDICTED: ATP synthase delta chain, chloroplastic [Cucumis melo])

HSP 1 Score: 448.7 bits (1153), Expect = 6.2e-123
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 1


Query: 1   MAALHQTAASLQAKLLPTARISRTTPVNLSFSATFPSRGLRLGQHRSHGGARMSATAAGS 60
           MAALHQTAASLQAKLLPTARISRTTPVNLSFSATFPSRGLRLGQHRSHGGARMSATAAGS
Sbjct: 1   MAALHQTAASLQAKLLPTARISRTTPVNLSFSATFPSRGLRLGQHRSHGGARMSATAAGS 60

Query: 61  YAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKKQAVVDEIASSSS 120
           YAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKKQAVVDEIASSSS
Sbjct: 61  YAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKKQAVVDEIASSSS 120

Query: 121 LQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIAKQ 180
           LQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIAKQ
Sbjct: 121 LQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIAKQ 180

Query: 181 VQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQLAV 240
           VQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQLAV
Sbjct: 181 VQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQLAV 240

[Close]

BLAST of MELO3C025005T1 vs. NCBI nr
Match: gi|449441205|ref|XP_004138373.1| (PREDICTED: ATP synthase subunit delta, chloroplastic [Cucumis sativus])

HSP 1 Score: 435.3 bits (1118), Expect = 7.1e-119
Identity = 233/240 (97.08%), Postives = 236/240 (98.33%), Query Frame = 1


Query: 1   MAALHQTAASLQAKLLPTARISRTTPVNLSFSATFPSRGLRLGQHRSHGGARMSATAAGS 60
           MAALHQT ASLQAKLLPTARISRTTPVNLSFSATFPSRGLRL QHRSHGGARMSATAAGS
Sbjct: 1   MAALHQTTASLQAKLLPTARISRTTPVNLSFSATFPSRGLRLVQHRSHGGARMSATAAGS 60

Query: 61  YAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKKQAVVDEIASSSS 120
           YAAALAEVAASNNTLDATSSDVEKIESVFAD +V DFF+NPTISVEKKQAVVDE+ASSSS
Sbjct: 61  YAAALAEVAASNNTLDATSSDVEKIESVFADQRVFDFFANPTISVEKKQAVVDEMASSSS 120

Query: 121 LQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIAKQ 180
           LQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIAKQ
Sbjct: 121 LQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIAKQ 180

Query: 181 VQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQLAV 240
           VQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQLAV
Sbjct: 181 VQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQLAV 240

[Close]

BLAST of MELO3C025005T1 vs. NCBI nr
Match: gi|823130593|ref|XP_012453807.1| (PREDICTED: ATP synthase subunit delta, chloroplastic [Gossypium raimondii])

HSP 1 Score: 337.8 bits (865), Expect = 1.6e-89
Identity = 182/242 (75.21%), Postives = 212/242 (87.60%), Query Frame = 1


Query: 1   MAALHQTAASLQAKLLPTARISRTTP-VNLSFSATFPSRGLRLGQHRS-HGGARMSATAA 60
           MA+L Q + SLQ KLL +++  R+ P +NLSFSATFPS  L+L   R  HGGA+MSA+AA
Sbjct: 1   MASLQQASISLQPKLLSSSQHPRSLPSLNLSFSATFPS--LKLSTTRPLHGGAKMSASAA 60

Query: 61  GSYAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKKQAVVDEIASS 120
            SYA ALA+VA SNNTLDATSSDVEK+E +F+DPQVL FF+NPTI V KK+ V+DEI SS
Sbjct: 61  SSYATALADVAKSNNTLDATSSDVEKVEKIFSDPQVLQFFTNPTIDVLKKRQVLDEIVSS 120

Query: 121 SSLQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIA 180
           S LQPH+ANFL ILVDAKRID++KEIV EFELVYN++T+TELAVVSSVV+LE QHLAQIA
Sbjct: 121 SELQPHTANFLNILVDAKRIDLIKEIVKEFELVYNELTDTELAVVSSVVKLESQHLAQIA 180

Query: 181 KQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQL 240
           KQVQKL+GAKNVRIKT IDPSLVAGFT+R+G+SGSKLID+SVKKQLEEIAAQLDLG+IQL
Sbjct: 181 KQVQKLTGAKNVRIKTMIDPSLVAGFTIRYGSSGSKLIDMSVKKQLEEIAAQLDLGDIQL 240

[Close]

BLAST of MELO3C025005T1 vs. NCBI nr
Match: gi|802761111|ref|XP_012089674.1| (PREDICTED: ATP synthase subunit delta, chloroplastic [Jatropha curcas])

HSP 1 Score: 337.0 bits (863), Expect = 2.6e-89
Identity = 183/247 (74.09%), Postives = 213/247 (86.23%), Query Frame = 1


Query: 1   MAALHQTAASLQAKLLPTARISRTT----PVNLSFSATFPSRGLR-LGQHRSHGG----A 60
           MAAL  T  SLQ+K+ P+AR+S+T     P++LSFS+TFPS  L     HR+ GG    A
Sbjct: 1   MAALQNTPISLQSKIPPSARLSKTLSSQKPLSLSFSSTFPSFNLSSTTAHRARGGGATGA 60

Query: 61  RMSATAAGSYAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKKQAV 120
           +MSATAA SYAAALA+VA SNNTLD+T++D+EKIE +F+DPQV+DFFSNPTISVEKK+ V
Sbjct: 61  KMSATAAASYAAALADVAKSNNTLDSTAADIEKIEKLFSDPQVVDFFSNPTISVEKKREV 120

Query: 121 VDEIASSSSLQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQ 180
           VDEIA S +LQPH+ANFL IL+DAKRID+ KEIV EFELVYNKIT+TELA V+SVV+LE 
Sbjct: 121 VDEIAKSLALQPHTANFLNILIDAKRIDLAKEIVKEFELVYNKITDTELATVTSVVKLES 180

Query: 181 QHLAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQL 239
           QHLAQIAKQVQKL+GAKNVRIKT IDPSLVAGFTVRFG+SGSKLIDLSVKKQLEEIAAQL
Sbjct: 181 QHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTVRFGSSGSKLIDLSVKKQLEEIAAQL 240

[Close]

BLAST of MELO3C025005T1 vs. NCBI nr
Match: gi|590611778|ref|XP_007022200.1| (ATP synthase delta-subunit gene [Theobroma cacao])

HSP 1 Score: 335.1 bits (858), Expect = 1.0e-88
Identity = 178/242 (73.55%), Postives = 210/242 (86.78%), Query Frame = 1


Query: 1   MAALHQTAASLQAKLLPTARISRTTP-VNLSFSATFPSRGLRLGQHRS-HGGARMSATAA 60
           MA+  QT+ SLQ+KLLP++++ R  P +NLSFSATFPS  L+L   R   GGA+MSATAA
Sbjct: 1   MASFQQTSISLQSKLLPSSQLPRALPSLNLSFSATFPS--LKLSTTRPLQGGAKMSATAA 60

Query: 61  GSYAAALAEVAASNNTLDATSSDVEKIESVFADPQVLDFFSNPTISVEKKQAVVDEIASS 120
            SYA ALA+VA SNNTLD+TSSD+E++E +F+DPQV+DFF+NPTI   KK+ V+D+I  S
Sbjct: 61  SSYALALADVAKSNNTLDSTSSDIEQVEKIFSDPQVIDFFANPTIDAIKKRQVLDDIVKS 120

Query: 121 SSLQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIA 180
           S LQPH+ANFL ILVDAKRIDI+KEIV EFE V+NK+T+TELAVVSSVV LE QHLAQIA
Sbjct: 121 SGLQPHTANFLNILVDAKRIDIIKEIVKEFESVFNKLTDTELAVVSSVVPLESQHLAQIA 180

Query: 181 KQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQL 240
           KQVQKL+GAKNVRIKT IDPSLVAGFT+R+GNSGSKLID+SVKKQLEEIAAQLDLG+IQL
Sbjct: 181 KQVQKLTGAKNVRIKTAIDPSLVAGFTIRYGNSGSKLIDMSVKKQLEEIAAQLDLGDIQL 240

The following BLAST results are available for this feature:

BLAST of MELO3C025005T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATPD_ARATH	1.3e-75	63.75	ATP synthase subunit delta, chloroplastic OS=Arabidopsis thaliana GN=ATPD PE=1 S...	[more]
ATPD_TOBAC	3.2e-71	58.87	ATP synthase delta chain, chloroplastic OS=Nicotiana tabacum GN=ATPD PE=2 SV=1	[more]
ATPD_PEA	1.2e-70	58.33	ATP synthase delta chain, chloroplastic OS=Pisum sativum GN=ATPD PE=1 SV=1	[more]
ATPD_SPIOL	5.0e-64	54.62	ATP synthase delta chain, chloroplastic OS=Spinacia oleracea GN=ATPD PE=1 SV=2	[more]
ATPD_SORBI	2.3e-56	49.80	ATP synthase delta chain, chloroplastic OS=Sorghum bicolor GN=ATPD PE=2 SV=1	[more]

BLAST of MELO3C025005T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7Z3_CUCSA	5.0e-119	97.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016970 PE=3 SV=1	[more]
A0A0D2NHU9_GOSRA	1.1e-89	75.21	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G037600 PE=3 SV=1	[more]
A0A067JS97_JATCU	1.8e-89	74.09	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01954 PE=3 SV=1	[more]
A0A061F8S8_THECC	7.0e-89	73.55	ATP synthase delta-subunit protein OS=Theobroma cacao GN=TCM_032365 PE=3 SV=1	[more]
A0A059BZG6_EUCGR	5.7e-83	68.98	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04149 PE=3 SV=1	[more]

BLAST of MELO3C025005T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G09650.1	7.2e-77	63.75	ATP synthase delta-subunit gene	[more]

BLAST of MELO3C025005T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659126215\|ref\|XP_008463069.1\|	6.2e-123	100.00	PREDICTED: ATP synthase delta chain, chloroplastic [Cucumis melo]	[more]
gi\|449441205\|ref\|XP_004138373.1\|	7.1e-119	97.08	PREDICTED: ATP synthase subunit delta, chloroplastic [Cucumis sativus]	[more]
gi\|823130593\|ref\|XP_012453807.1\|	1.6e-89	75.21	PREDICTED: ATP synthase subunit delta, chloroplastic [Gossypium raimondii]	[more]
gi\|802761111\|ref\|XP_012089674.1\|	2.6e-89	74.09	PREDICTED: ATP synthase subunit delta, chloroplastic [Jatropha curcas]	[more]
gi\|590611778\|ref\|XP_007022200.1\|	1.0e-88	73.55	ATP synthase delta-subunit gene [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000711	ATPase_OSCP/dsu
IPR020781	ATPase_OSCP/d_CS
IPR026015	ATP_synth_OSCP/delta_N_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0046933	proton-transporting ATP synthase activity, rotational mechanism

Vocabulary: **Biological Process**
Term	Definition
GO:0015986	ATP synthesis coupled proton transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0019682	glyceraldehyde-3-phosphate metabolic process
biological_process	GO:0044802	single-organism membrane organization
biological_process	GO:0007165	signal transduction
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0031347	regulation of defense response
biological_process	GO:0009772	photosynthetic electron transport in photosystem II
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0032787	monocarboxylic acid metabolic process
biological_process	GO:0009814	defense response, incompatible interaction
biological_process	GO:0051186	cofactor metabolic process
biological_process	GO:1901701	cellular response to oxygen-containing compound
biological_process	GO:0071310	cellular response to organic substance
biological_process	GO:0071229	cellular response to acid chemical
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0044085	cellular component biogenesis
cellular_component	GO:0016020	membrane
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0045259	proton-transporting ATP synthase complex
cellular_component	GO:0010319	stromule
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C025005	MELO3C025005	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C025005T1	MELO3C025005T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C025005T1.cds1	MELO3C025005T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000711	ATPase, OSCP/delta subunit	PRINTS	PR00125	ATPASEDELTA	coord: 206..224 score: 2.1E-23coord: 188..203 score: 2.1E-23coord: 57..76 score: 2.1E-23coord: 137..151 score: 2.1E-23coord: 126..137 score: 2.1
IPR000711	ATPase, OSCP/delta subunit	HAMAP	MF_01416	ATP_synth_delta_bact	coord: 53..233 score: 18
IPR000711	ATPase, OSCP/delta subunit	PANTHER	PTHR11910	ATP SYNTHASE DELTA CHAIN	coord: 31..235 score: 1.9E
IPR000711	ATPase, OSCP/delta subunit	PFAM	PF00213	OSCP	coord: 58..231 score: 5.3
IPR000711	ATPase, OSCP/delta subunit	TIGRFAMs	TIGR01145	TIGR01145	coord: 58..231 score: 3.4
IPR020781	ATPase, OSCP/delta subunit, conserved site	PROSITE	PS00389	ATPASE_DELTA	coord: 190..209 scor
IPR026015	F1F0 ATP synthase OSCP/delta subunit, N-terminal domain	GENE3D	G3DSA:1.10.520.20		coord: 55..154 score: 9.2
IPR026015	F1F0 ATP synthase OSCP/delta subunit, N-terminal domain	unknown	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase	coord: 54..157 score: 2.48
None	No IPR available	PANTHER	PTHR11910:SF7	F-TYPE H+-TRANSPORTING ATPASE SUBUNIT DELTA	coord: 31..235 score: 1.9E