MELO3C024948T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C024948T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	COP1-interacting protein-related
Location	chr1 : 10972558 .. 10975480 (+)
Sequence length	1238

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCATCCTACGGAAAGCTTAAGAGGCACCAGTCGGACGGTTTCACTCTGTGGCTCCGCTCACTGGCGCTGCAATGGCCGCTTCGGAGCTGGAAGTTGCATTTTTTATCGATACTGATTTCGGCACCCGCCTGGCTGTTGCCGTTCCCCCAGACATCGCCGCCGGAGCTTTAAAGAGTGAGCCCAAGAACCGATGAAAAACAACTGCTCTTCTCTTTTCCTCTTCTTTCACTCCGTTTAGAAATAGCTATGTGGGCGTTTTGTTTTTTCTCTCTTTCATCCGAGAAATACCCCATTTCAGAAGACTGTTCAATCTATTTGAGGATTTTGACTGTTTATCTTTCTGGGTTTTAAAAGAGCTCTACCAAATCCTTTAGGTTTTTCTTTATGCCTTGTTCAGATTCTGGGTTCTTCCTCATTTTTCTGCAGTAATGGCATTTCTGCTGCTTACTTTCCGGTTAAAAGTTGCATTTTGTTTGTTCATTATGAATATATGATTGCTTATATCTATTTTTCTCTGTGTTTGATTTCTTAGGGGTCTTTTGTTACTTTACTGTTTCTCGTTTCCATCCTCTTGTTTACAATTTTCGCGAAGCAAACACACTACCAAATGGCCCTGAGGGTCTTGGTTAGGTTCAATGTTTAAAGTCTAATGTCCCTGTTTTCAAAACACTTTATTGGTCATTATTTATCTCTCATTCTTCTGACTGGGAGATTTTTTTTTTATAATTGTATTGTTATAGTTAGCTTCCTTTGTTTTTTGTTTTAGTTCCTTTTGTCTTGATCTTTCCTTTTTGTATTTCCCTAGTCTATTTGTTCGGGCTTCTCTATGAATCTTTGTTTTTTCTCGGAAAAAAGGCTAGTTTTAAGATACGGATCATGGTTTTAATAAGTTTGGATTTATATGACATTTGGAGTTAAGAAGATTGGGTTTGTAGATATATATATGTTGAAATTTTACAAAAGAAGAAGTTGCAAAATTCAGGATTACTGTACTATGTGTTTGGTTTGTGAGTTTATATGACTTCTGAAAGTTTGTATGGACGGTGAGTTTCCTGAACTTTCGCTTGTTTAACATGAAATTGTATAGCTTAGCTAGTGGACTTAAGAATTAACAAACCTGTAGCTGTAGTGTGAGATAAGCAATCCAGATACCTGACATAAGTTTGGCTTCTGAAGTATGAATTACATGGTTAACACGTAACTTGTAAGTCAAATTTTGTTCTTAACGATTCATGTTTAGGATTGATTTGAAATGGTGAGGTTAGGTTTTGGTGTGTTTTGACATTTTGTCTGTCCTTGTATTCTTTTATTTTTGTTTTCTGGATGAAAGCAATTCTTTCTAGATAAAAAGGCTCTAAATTCACTTTCTAAATATCTATATTTGTCAATGTTTATAATCATTCTGGACACACGCATTTAATAATTCAAGATCAATTTTGGGGATGTGTTTGGAGTTGTAGAACCAAACATTAAAGTGACTTTGAGTGATTTTGAATGTAACAAAAGTAATTCTAACCATTTCAAAATCATTTGTCCTTAACATTGTTTCTACACTTGGACACTCGAACTTTTAAGTCGAGGATGAAAGATTTTATTCCATGTCATGCGGGCTTATGCCACCTCAGATGCAAAGTTGCGTGCATAATGTCTATAATCTACAGTGTCTTTACTGTTTTGCCTGCTGATCGCAAACTTTTTCCAGGGGAAGTTGAGAGAGTACATTTTAACTGTTTCCCAAGTATAGGAGAGATCAAGGTGGATGGATTCATGGTGTGTTTGTAGATTGTGTTTGTTTGTTTTCATGGTCAACATCATATTTAAGGTCATTGTTCTAATTTGTGCCATTTCTATTTCTTCAGGTGAAGCAAAACTCGAACTTCTACCATTTGCCCGACACGTTGCTCACAAAACTCGCTTCCCGACTGGAAGTGATGCAGTTTCTTCATGTCAAAGCACGGCCTTTGAATGAGTTTATTGAGCCTTGTATACCTGAAAATGCCAATTGTTCCCCCAACCTAAACTATGCCACTTACCCTATGGAAAGACGAGGCTACATGGGAACTGCCTGCAAGAGTAAAATCAGAATCAATGGCAAGAAACATATTAGAAAAAGGTTCCAAAGGCAGAATTGCTTATCAAGACTAGTTGGCCGAGGCGTCTTAGCCTGGAATACAAGGAGAAAGAGGAAAATAACTAACAAAAAACAGGTTTTAGAGCACATGGAAAAGAATTCTGATACGAAGGGTCTGATAAAAGATGTGGATAATCCCAATGGTTCGATTGATACATTGTCATACCATTGTGTGCCAAATGACGAAGTGAGGACCACAAAACGAAGGTTGGCAAGCTCCTCATTGGTAGAGGCAGCCACAGACAGTGAGTTGTCCTCTGAAGCCATGTCTGTTTCTAGTATCATAAAAAGATATTTTTCGAGCAATGACATAGAGAGCAGCATTTCAAACCAATCAAGATGCGATATTACTCAAATTCGGCCAGAAGAGTATTTAAAGATGAAGAAGAATATGGGAAGAGGCCCAAGCTTATTACCTTTGAAAGTTCCATTTAAACCATGTCCTCAAAAGGCTGAGAGATCTAAGCTTGGGAAAAGGCTGGTGATGGCTTCATATAATCTTGGGATTTCTCCCATCAGGGGAAGACCAGAAATTTCACTTTGTAATGCTAAAGGTAAAAAGTTTCAAGAAATGATGACTTTAGCTAAAAGTTCTTGTTTTGAGATAAGTGACAGTGAAGATTGAACTTAATTATGAGATTACTTTTGTTTCCACAAGTATATAGCAATATAAGGATGAATTTCTTGGGTTTTGTTTTTAACTTCTCGTAGCCTTTGGCTTAATGTGTGGTCTCCATTGTAGTGTAGTATAAATGAAAAAGTACATATGAGGGATGTACCCGTTTTTGCTC

mRNA sequence

GCCATCCTACGGAAAGCTTAAGAGGCACCAGTCGGACGGTTTCACTCTGTGGCTCCGCTCACTGGCGCTGCAATGGCCGCTTCGGAGCTGGAAGTTGCATTTTTTATCGATACTGATTTCGGCACCCGCCTGGCTGTTGCCGTTCCCCCAGACATCGCCGCCGGAGCTTTAAAGAGTGAAGCAAAACTCGAACTTCTACCATTTGCCCGACACGTTGCTCACAAAACTCGCTTCCCGACTGGAAGTGATGCAGTTTCTTCATGTCAAAGCACGGCCTTTGAATGAGTTTATTGAGCCTTGTATACCTGAAAATGCCAATTGTTCCCCCAACCTAAACTATGCCACTTACCCTATGGAAAGACGAGGCTACATGGGAACTGCCTGCAAGAGTAAAATCAGAATCAATGGCAAGAAACATATTAGAAAAAGGTTCCAAAGGCAGAATTGCTTATCAAGACTAGTTGGCCGAGGCGTCTTAGCCTGGAATACAAGGAGAAAGAGGAAAATAACTAACAAAAAACAGGTTTTAGAGCACATGGAAAAGAATTCTGATACGAAGGGTCTGATAAAAGATGTGGATAATCCCAATGGTTCGATTGATACATTGTCATACCATTGTGTGCCAAATGACGAAGTGAGGACCACAAAACGAAGGTTGGCAAGCTCCTCATTGGTAGAGGCAGCCACAGACAGTGAGTTGTCCTCTGAAGCCATGTCTGTTTCTAGTATCATAAAAAGATATTTTTCGAGCAATGACATAGAGAGCAGCATTTCAAACCAATCAAGATGCGATATTACTCAAATTCGGCCAGAAGAGTATTTAAAGATGAAGAAGAATATGGGAAGAGGCCCAAGCTTATTACCTTTGAAAGTTCCATTTAAACCATGTCCTCAAAAGGCTGAGAGATCTAAGCTTGGGAAAAGGCTGGTGATGGCTTCATATAATCTTGGGATTTCTCCCATCAGGGGAAGACCAGAAATTTCACTTTGTAATGCTAAAGGTAAAAAGTTTCAAGAAATGATGACTTTAGCTAAAAGTTCTTGTTTTGAGATAAGTGACAGTGAAGATTGAACTTAATTATGAGATTACTTTTGTTTCCACAAGTATATAGCAATATAAGGATGAATTTCTTGGGTTTTGTTTTTAACTTCTCGTAGCCTTTGGCTTAATGTGTGGTCTCCATTGTAGTGTAGTATAAATGAAAAAGTACATATGAGGGATGTACCCGTTTTTGCTC

Coding sequence (CDS)

ATGCAGTTTCTTCATGTCAAAGCACGGCCTTTGAATGAGTTTATTGAGCCTTGTATACCTGAAAATGCCAATTGTTCCCCCAACCTAAACTATGCCACTTACCCTATGGAAAGACGAGGCTACATGGGAACTGCCTGCAAGAGTAAAATCAGAATCAATGGCAAGAAACATATTAGAAAAAGGTTCCAAAGGCAGAATTGCTTATCAAGACTAGTTGGCCGAGGCGTCTTAGCCTGGAATACAAGGAGAAAGAGGAAAATAACTAACAAAAAACAGGTTTTAGAGCACATGGAAAAGAATTCTGATACGAAGGGTCTGATAAAAGATGTGGATAATCCCAATGGTTCGATTGATACATTGTCATACCATTGTGTGCCAAATGACGAAGTGAGGACCACAAAACGAAGGTTGGCAAGCTCCTCATTGGTAGAGGCAGCCACAGACAGTGAGTTGTCCTCTGAAGCCATGTCTGTTTCTAGTATCATAAAAAGATATTTTTCGAGCAATGACATAGAGAGCAGCATTTCAAACCAATCAAGATGCGATATTACTCAAATTCGGCCAGAAGAGTATTTAAAGATGAAGAAGAATATGGGAAGAGGCCCAAGCTTATTACCTTTGAAAGTTCCATTTAAACCATGTCCTCAAAAGGCTGAGAGATCTAAGCTTGGGAAAAGGCTGGTGATGGCTTCATATAATCTTGGGATTTCTCCCATCAGGGGAAGACCAGAAATTTCACTTTGTAATGCTAAAGGTAAAAAGTTTCAAGAAATGATGACTTTAGCTAAAAGTTCTTGTTTTGAGATAAGTGACAGTGAAGATTGA

Protein sequence

MQFLHVKARPLNEFIEPCIPENANCSPNLNYATYPMERRGYMGTACKSKIRINGKKHIRKRFQRQNCLSRLVGRGVLAWNTRRKRKITNKKQVLEHMEKNSDTKGLIKDVDNPNGSIDTLSYHCVPNDEVRTTKRRLASSSLVEAATDSELSSEAMSVSSIIKRYFSSNDIESSISNQSRCDITQIRPEEYLKMKKNMGRGPSLLPLKVPFKPCPQKAERSKLGKRLVMASYNLGISPIRGRPEISLCNAKGKKFQEMMTLAKSSCFEISDSED*

Homology

[Close]

BLAST of MELO3C024948T1 vs. TrEMBL
Match: A0A0A0K319_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G122360 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 9.0e-133
Identity = 244/274 (89.05%), Postives = 254/274 (92.70%), Query Frame = 1


Query: 1   MQFLHVKARPLNEFIEPCIPENANCSPNLNYATYPMERRGYMGTACKSKIRINGKKHIRK 60
           MQFLHVKARPLN FIEPCIP+NA+CSPNLNY TYP ERRGY+GTACKSKIRINGKKH RK
Sbjct: 67  MQFLHVKARPLNGFIEPCIPKNADCSPNLNYVTYPTERRGYLGTACKSKIRINGKKHTRK 126

Query: 61  RFQRQNCLSRLVGRGVLAWNTRRKRKITNKKQVLEHMEKNSDTKGLIKDVDNPNGSIDTL 120
           RFQRQNCLSRLVGRG+LAWNT+RKRKITNKKQVLEHMEKNSDT+GLIKDV N NG I TL
Sbjct: 127 RFQRQNCLSRLVGRGILAWNTKRKRKITNKKQVLEHMEKNSDTEGLIKDVKNHNGLIGTL 186

Query: 121 SYHCVPNDEVRTTKRRLASSSLVEAATDSELSSEAMSVSSIIKRYFSSNDIESSISNQSR 180
           SYHCV  DEVRTTK+RLASSS VEAATDSELSSEAMSVSSIIKRYFSS D ESSISNQSR
Sbjct: 187 SYHCVSIDEVRTTKQRLASSSSVEAATDSELSSEAMSVSSIIKRYFSSYDRESSISNQSR 246

Query: 181 CDITQIRPEEYLKMKKNMGRGPSLLPLKVPFKPCPQKAERSKLGKRLVMASYNLGISPIR 240
            DIT+ +P EYLKM KNMGRGPS LPLKVPFKPCPQK ERSKLGKRLVMASYNLGISPI 
Sbjct: 247 YDITRSQPGEYLKM-KNMGRGPSSLPLKVPFKPCPQKDERSKLGKRLVMASYNLGISPIG 306

Query: 241 GRPEISLCNAKGKKFQEMMTLAKSSCFEISDSED 275
           GRPEISLCNAKGKKFQEMMTLAKSSCFEISDSE+
Sbjct: 307 GRPEISLCNAKGKKFQEMMTLAKSSCFEISDSEN 339

[Close]

BLAST of MELO3C024948T1 vs. TrEMBL
Match: D7UAI5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g00660 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.6e-12
Identity = 92/307 (29.97%), Postives = 135/307 (43.97%), Query Frame = 1


Query: 3   FLHVKARPL-----NEFIEPCIPENANCSPNLNYATYPMERRGYMGTACKSKIRINGKKH 62
           FLH +A  L     +        E  N + + +  T PME + Y   A + K +  G+  
Sbjct: 84  FLHTEASSLGGSDLSSLSNHVTVETRNHTYDGSNVTDPMEPKSYTAIAVRDKNKSKGR-- 143

Query: 63  IRKRFQRQNCLSRLVGRGVL-----AWNTRRKRKITNKKQVLEHMEKNSDTKGLIKDVDN 122
            R+R +R +CL  ++  G+L     +  +RRKR   N+          +   G  K +  
Sbjct: 144 -RRRIKRYHCLKAVLW-GLLRTVYFSRKSRRKRVKKNRSLACTVSGIENGCPGRSKKISG 203

Query: 123 PNGSIDTLSYHCVPNDEVRTTKRRLASSSLVEAATDSELSSEAMSVSSIIKRYFSS---- 182
           P  S    S  C   +E    K  +  S +VE    SE SSE +SVS II+RYFS+    
Sbjct: 204 P--SAKERSGFCTSGNEEEHRKEWI--SKVVECP--SERSSEVVSVSGIIERYFSNFDGM 263

Query: 183 NDIESSISNQSRCDITQIRPEEYLKMKKN-------MGRGPSLLPLKVPFKPCP------ 242
           N   S  S++    +      E L++  +       +G  P LL  K P +  P      
Sbjct: 264 NHFGSPSSSEVNSRVISSWSNEQLRVTTDGNHSDIQIGTTP-LLTTKTPARETPFSLSTN 323

Query: 243 -------QKAERSKLGKRLVMASYNLGISPIRGRPEISLCNAK-GKKFQEMMTLAKSSCF 275
                   K E +++GKRLVMAS  LGIS  + RP IS+   K GK      +L +S  F
Sbjct: 324 SRPGTSRDKLEITEVGKRLVMASNTLGISSSKQRPAISISRFKDGKLLGLDSSLVRSMVF 379

[Close]

BLAST of MELO3C024948T1 vs. TrEMBL
Match: A5ATX5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042361 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.6e-12
Identity = 92/307 (29.97%), Postives = 135/307 (43.97%), Query Frame = 1


Query: 3   FLHVKARPL-----NEFIEPCIPENANCSPNLNYATYPMERRGYMGTACKSKIRINGKKH 62
           FLH +A  L     +        E  N + + +  T PME + Y   A + K +  G+  
Sbjct: 118 FLHTEASSLGGSDLSSLSNHVTVETRNHTYDGSNVTDPMEPKSYTAIAVRDKNKSKGR-- 177

Query: 63  IRKRFQRQNCLSRLVGRGVL-----AWNTRRKRKITNKKQVLEHMEKNSDTKGLIKDVDN 122
            R+R +R +CL  ++  G+L     +  +RRKR   N+          +   G  K +  
Sbjct: 178 -RRRIKRYHCLKAVLW-GLLRTVYFSRKSRRKRVKKNRSLACTVSGIENGCPGRSKKISG 237

Query: 123 PNGSIDTLSYHCVPNDEVRTTKRRLASSSLVEAATDSELSSEAMSVSSIIKRYFSS---- 182
           P  S    S  C   +E    K  +  S +VE    SE SSE +SVS II+RYFS+    
Sbjct: 238 P--SAKERSGFCTSGNEEEHRKEWI--SKVVECP--SERSSEVVSVSGIIERYFSNFDGM 297

Query: 183 NDIESSISNQSRCDITQIRPEEYLKMKKN-------MGRGPSLLPLKVPFKPCP------ 242
           N   S  S++    +      E L++  +       +G  P LL  K P +  P      
Sbjct: 298 NHFGSPSSSEVNSRVISSWSNEQLRVTTDGNHSDIQIGTTP-LLTTKTPARETPFSLSTN 357

Query: 243 -------QKAERSKLGKRLVMASYNLGISPIRGRPEISLCNAK-GKKFQEMMTLAKSSCF 275
                   K E +++GKRLVMAS  LGIS  + RP IS+   K GK      +L +S  F
Sbjct: 358 SRPGTSRDKLEITEVGKRLVMASNTLGISSSKQRPAISISRFKDGKLLGLDSSLVRSMVF 413

[Close]

BLAST of MELO3C024948T1 vs. TrEMBL
Match: W9REF4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007792 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.9e-08
Identity = 74/303 (24.42%), Postives = 128/303 (42.24%), Query Frame = 1


Query: 3   FLHVKARPLNEFIEPCIPENANCSPNL-----NYATYPMERRGYMGTACKSKIRINGKKH 62
           FL  +AR  +E   PC+ ++ +   +L     +  T P+E    + +   S  R   +K+
Sbjct: 84  FLRAEARTSSEPFCPCLLDSVSKDLDLVLSNDSIITDPLEPENSVVSIDNSNKRCEEEKY 143

Query: 63  IRKRFQRQNCLSRLVGRGVLAWNTRRKRKITNKKQVLEHMEKNSDTKGLIKDVDNPNGSI 122
                Q                  ++K+K   K  +L++ +  ++ K +       + + 
Sbjct: 144 GEMELQSHK-------------PPKKKKKRKRKSCILDYKDNGNEKKFVCAGAKPSSLTA 203

Query: 123 DTLSYHCVPNDEVRTTKRRLASSSLVEAATDSELSSEAMSVSSIIKRYFSSNDIESSISN 182
           + +S +C P       + + AS  + +A  D  + SE  SV+SII RYF S+    + ++
Sbjct: 204 NKISDYC-PFATEAEARYQQASREMTDATGD--MFSEVKSVTSIINRYFPSSSEMKAHAS 263

Query: 183 QSRCDITQIRPEEYLKMKKNMG-------------------RGPS-LLPLKVPFKP---- 242
            +  D+T  R     K  K                      + PS LLP ++P  P    
Sbjct: 264 PASSDVTSKRQSRRRKRSKTKSGDDGALSTQVDSVPKFSGRQHPSNLLPCRLPTSPSQGT 323

Query: 243 CPQKAERSKLGKRLVMASYNLGISPIRGRPEISLCNAK-GKKFQ-EMMTLAKSSCFEISD 275
              K + + +GKRL++A  NLGIS  +      LC ++ GK       +L K + FEISD
Sbjct: 324 SKGKIDGADVGKRLIVALDNLGISSSKTISPARLCRSRYGKGLHLNSSSLVKKAVFEISD 370

[Close]

BLAST of MELO3C024948T1 vs. TrEMBL
Match: M5W0D6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014770mg PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 9.0e-08
Identity = 65/258 (25.19%), Postives = 116/258 (44.96%), Query Frame = 1


Query: 3   FLHVKARPLNEFIEPCIPENANCSPNLNYATYPMERRGYMGTACKSKIRINGKKHIR-KR 62
           FLHV+AR L++   PC+P+     P  +  T+P+     + +  KS  + + K+ +R K 
Sbjct: 84  FLHVEARFLSDCNRPCLPKYGASKPKFS-ITHPLHPENIVTSTAKSNTKGHCKRMLREKL 143

Query: 63  FQRQNCLSRLVGRGVLAWNTRRKRK------ITNKKQVLEHMEKNSDTKGLIKDVDNPNG 122
           F+  N L   + R       R++RK        N+ Q+ +    +  +K +I +  + + 
Sbjct: 144 FRCHNPLLGKLRRPFFFTKIRKRRKKISSAYEVNRVQIDKEKFPDCASKSMIDEPTHTSS 203

Query: 123 SIDTLS------YHCVPNDEVRTTKRRLASSSLVEAATDSELSSEAMSVSSIIKRYFSSN 182
            + ++S      +  +  D   ++  R  +S +V++  +  L ++A             +
Sbjct: 204 EVVSVSGIIHRYFSNLSEDGGPSSPTRSVTSRVVQSWPEEHLKTQA-------------D 263

Query: 183 DIESSISNQSRCDITQIRPEEYLKMKKNMGRGPSLLPLKVPFKPCPQKAERSKLGKRLVM 242
           DI SSI         Q+ P      K+     P  LP    +     K  + ++GKRLV+
Sbjct: 264 DICSSI---------QVSPLTQFSAKRT--AKPVCLPSPTGYGQRRYKLNKPEVGKRLVV 316

Query: 243 ASYNLGISPIRGRPEISL 248
           ASY+LGISP +  P ISL
Sbjct: 324 ASYSLGISPSKEHPAISL 316

[Close]

BLAST of MELO3C024948T1 vs. NCBI nr
Match: gi|659126100|ref|XP_008463010.1| (PREDICTED: uncharacterized protein LOC103501255 [Cucumis melo])

HSP 1 Score: 552.7 bits (1423), Expect = 3.5e-154
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1


Query: 1   MQFLHVKARPLNEFIEPCIPENANCSPNLNYATYPMERRGYMGTACKSKIRINGKKHIRK 60
           MQFLHVKARPLNEFIEPCIPENANCSPNLNYATYPMERRGYMGTACKSKIRINGKKHIRK
Sbjct: 82  MQFLHVKARPLNEFIEPCIPENANCSPNLNYATYPMERRGYMGTACKSKIRINGKKHIRK 141

Query: 61  RFQRQNCLSRLVGRGVLAWNTRRKRKITNKKQVLEHMEKNSDTKGLIKDVDNPNGSIDTL 120
           RFQRQNCLSRLVGRGVLAWNTRRKRKITNKKQVLEHMEKNSDTKGLIKDVDNPNGSIDTL
Sbjct: 142 RFQRQNCLSRLVGRGVLAWNTRRKRKITNKKQVLEHMEKNSDTKGLIKDVDNPNGSIDTL 201

Query: 121 SYHCVPNDEVRTTKRRLASSSLVEAATDSELSSEAMSVSSIIKRYFSSNDIESSISNQSR 180
           SYHCVPNDEVRTTKRRLASSSLVEAATDSELSSEAMSVSSIIKRYFSSNDIESSISNQSR
Sbjct: 202 SYHCVPNDEVRTTKRRLASSSLVEAATDSELSSEAMSVSSIIKRYFSSNDIESSISNQSR 261

Query: 181 CDITQIRPEEYLKMKKNMGRGPSLLPLKVPFKPCPQKAERSKLGKRLVMASYNLGISPIR 240
           CDITQIRPEEYLKMKKNMGRGPSLLPLKVPFKPCPQKAERSKLGKRLVMASYNLGISPIR
Sbjct: 262 CDITQIRPEEYLKMKKNMGRGPSLLPLKVPFKPCPQKAERSKLGKRLVMASYNLGISPIR 321

Query: 241 GRPEISLCNAKGKKFQEMMTLAKSSCFEISDSED 275
           GRPEISLCNAKGKKFQEMMTLAKSSCFEISDSED
Sbjct: 322 GRPEISLCNAKGKKFQEMMTLAKSSCFEISDSED 355

[Close]

BLAST of MELO3C024948T1 vs. NCBI nr
Match: gi|778725386|ref|XP_004151358.2| (PREDICTED: uncharacterized protein LOC101220553 [Cucumis sativus])

HSP 1 Score: 481.1 bits (1237), Expect = 1.3e-132
Identity = 244/274 (89.05%), Postives = 254/274 (92.70%), Query Frame = 1


Query: 1   MQFLHVKARPLNEFIEPCIPENANCSPNLNYATYPMERRGYMGTACKSKIRINGKKHIRK 60
           MQFLHVKARPLN FIEPCIP+NA+CSPNLNY TYP ERRGY+GTACKSKIRINGKKH RK
Sbjct: 67  MQFLHVKARPLNGFIEPCIPKNADCSPNLNYVTYPTERRGYLGTACKSKIRINGKKHTRK 126

Query: 61  RFQRQNCLSRLVGRGVLAWNTRRKRKITNKKQVLEHMEKNSDTKGLIKDVDNPNGSIDTL 120
           RFQRQNCLSRLVGRG+LAWNT+RKRKITNKKQVLEHMEKNSDT+GLIKDV N NG I TL
Sbjct: 127 RFQRQNCLSRLVGRGILAWNTKRKRKITNKKQVLEHMEKNSDTEGLIKDVKNHNGLIGTL 186

Query: 121 SYHCVPNDEVRTTKRRLASSSLVEAATDSELSSEAMSVSSIIKRYFSSNDIESSISNQSR 180
           SYHCV  DEVRTTK+RLASSS VEAATDSELSSEAMSVSSIIKRYFSS D ESSISNQSR
Sbjct: 187 SYHCVSIDEVRTTKQRLASSSSVEAATDSELSSEAMSVSSIIKRYFSSYDRESSISNQSR 246

Query: 181 CDITQIRPEEYLKMKKNMGRGPSLLPLKVPFKPCPQKAERSKLGKRLVMASYNLGISPIR 240
            DIT+ +P EYLKM KNMGRGPS LPLKVPFKPCPQK ERSKLGKRLVMASYNLGISPI 
Sbjct: 247 YDITRSQPGEYLKM-KNMGRGPSSLPLKVPFKPCPQKDERSKLGKRLVMASYNLGISPIG 306

Query: 241 GRPEISLCNAKGKKFQEMMTLAKSSCFEISDSED 275
           GRPEISLCNAKGKKFQEMMTLAKSSCFEISDSE+
Sbjct: 307 GRPEISLCNAKGKKFQEMMTLAKSSCFEISDSEN 339

[Close]

BLAST of MELO3C024948T1 vs. NCBI nr
Match: gi|731433296|ref|XP_010644590.1| (PREDICTED: uncharacterized protein LOC104877623 isoform X2 [Vitis vinifera])

HSP 1 Score: 81.6 bits (200), Expect = 2.3e-12
Identity = 92/307 (29.97%), Postives = 135/307 (43.97%), Query Frame = 1


Query: 3   FLHVKARPL-----NEFIEPCIPENANCSPNLNYATYPMERRGYMGTACKSKIRINGKKH 62
           FLH +A  L     +        E  N + + +  T PME + Y   A + K +  G+  
Sbjct: 84  FLHTEASSLGGSDLSSLSNHVTVETRNHTYDGSNVTDPMEPKSYTAIAVRDKNKSKGR-- 143

Query: 63  IRKRFQRQNCLSRLVGRGVL-----AWNTRRKRKITNKKQVLEHMEKNSDTKGLIKDVDN 122
            R+R +R +CL  ++  G+L     +  +RRKR   N+          +   G  K +  
Sbjct: 144 -RRRIKRYHCLKAVLW-GLLRTVYFSRKSRRKRVKKNRSLACTVSGIENGCPGRSKKISG 203

Query: 123 PNGSIDTLSYHCVPNDEVRTTKRRLASSSLVEAATDSELSSEAMSVSSIIKRYFSS---- 182
           P  S    S  C   +E    K  +  S +VE    SE SSE +SVS II+RYFS+    
Sbjct: 204 P--SAKERSGFCTSGNEEEHRKEWI--SKVVECP--SERSSEVVSVSGIIERYFSNFDGM 263

Query: 183 NDIESSISNQSRCDITQIRPEEYLKMKKN-------MGRGPSLLPLKVPFKPCP------ 242
           N   S  S++    +      E L++  +       +G  P LL  K P +  P      
Sbjct: 264 NHFGSPSSSEVNSRVISSWSNEQLRVTTDGNHSDIQIGTTP-LLTTKTPARETPFSLSTN 323

Query: 243 -------QKAERSKLGKRLVMASYNLGISPIRGRPEISLCNAK-GKKFQEMMTLAKSSCF 275
                   K E +++GKRLVMAS  LGIS  + RP IS+   K GK      +L +S  F
Sbjct: 324 SRPGTSRDKLEITEVGKRLVMASNTLGISSSKQRPAISISRFKDGKLLGLDSSLVRSMVF 379

[Close]

BLAST of MELO3C024948T1 vs. NCBI nr
Match: gi|147837900|emb|CAN67146.1| (hypothetical protein VITISV_042361 [Vitis vinifera])

HSP 1 Score: 81.6 bits (200), Expect = 2.3e-12
Identity = 92/307 (29.97%), Postives = 135/307 (43.97%), Query Frame = 1


Query: 3   FLHVKARPL-----NEFIEPCIPENANCSPNLNYATYPMERRGYMGTACKSKIRINGKKH 62
           FLH +A  L     +        E  N + + +  T PME + Y   A + K +  G+  
Sbjct: 118 FLHTEASSLGGSDLSSLSNHVTVETRNHTYDGSNVTDPMEPKSYTAIAVRDKNKSKGR-- 177

Query: 63  IRKRFQRQNCLSRLVGRGVL-----AWNTRRKRKITNKKQVLEHMEKNSDTKGLIKDVDN 122
            R+R +R +CL  ++  G+L     +  +RRKR   N+          +   G  K +  
Sbjct: 178 -RRRIKRYHCLKAVLW-GLLRTVYFSRKSRRKRVKKNRSLACTVSGIENGCPGRSKKISG 237

Query: 123 PNGSIDTLSYHCVPNDEVRTTKRRLASSSLVEAATDSELSSEAMSVSSIIKRYFSS---- 182
           P  S    S  C   +E    K  +  S +VE    SE SSE +SVS II+RYFS+    
Sbjct: 238 P--SAKERSGFCTSGNEEEHRKEWI--SKVVECP--SERSSEVVSVSGIIERYFSNFDGM 297

Query: 183 NDIESSISNQSRCDITQIRPEEYLKMKKN-------MGRGPSLLPLKVPFKPCP------ 242
           N   S  S++    +      E L++  +       +G  P LL  K P +  P      
Sbjct: 298 NHFGSPSSSEVNSRVISSWSNEQLRVTTDGNHSDIQIGTTP-LLTTKTPARETPFSLSTN 357

Query: 243 -------QKAERSKLGKRLVMASYNLGISPIRGRPEISLCNAK-GKKFQEMMTLAKSSCF 275
                   K E +++GKRLVMAS  LGIS  + RP IS+   K GK      +L +S  F
Sbjct: 358 SRPGTSRDKLEITEVGKRLVMASNTLGISSSKQRPAISISRFKDGKLLGLDSSLVRSMVF 413

[Close]

BLAST of MELO3C024948T1 vs. NCBI nr
Match: gi|731433294|ref|XP_010644589.1| (PREDICTED: uncharacterized protein LOC104877623 isoform X1 [Vitis vinifera])

HSP 1 Score: 81.6 bits (200), Expect = 2.3e-12
Identity = 92/307 (29.97%), Postives = 135/307 (43.97%), Query Frame = 1


Query: 3   FLHVKARPL-----NEFIEPCIPENANCSPNLNYATYPMERRGYMGTACKSKIRINGKKH 62
           FLH +A  L     +        E  N + + +  T PME + Y   A + K +  G+  
Sbjct: 100 FLHTEASSLGGSDLSSLSNHVTVETRNHTYDGSNVTDPMEPKSYTAIAVRDKNKSKGR-- 159

Query: 63  IRKRFQRQNCLSRLVGRGVL-----AWNTRRKRKITNKKQVLEHMEKNSDTKGLIKDVDN 122
            R+R +R +CL  ++  G+L     +  +RRKR   N+          +   G  K +  
Sbjct: 160 -RRRIKRYHCLKAVLW-GLLRTVYFSRKSRRKRVKKNRSLACTVSGIENGCPGRSKKISG 219

Query: 123 PNGSIDTLSYHCVPNDEVRTTKRRLASSSLVEAATDSELSSEAMSVSSIIKRYFSS---- 182
           P  S    S  C   +E    K  +  S +VE    SE SSE +SVS II+RYFS+    
Sbjct: 220 P--SAKERSGFCTSGNEEEHRKEWI--SKVVECP--SERSSEVVSVSGIIERYFSNFDGM 279

Query: 183 NDIESSISNQSRCDITQIRPEEYLKMKKN-------MGRGPSLLPLKVPFKPCP------ 242
           N   S  S++    +      E L++  +       +G  P LL  K P +  P      
Sbjct: 280 NHFGSPSSSEVNSRVISSWSNEQLRVTTDGNHSDIQIGTTP-LLTTKTPARETPFSLSTN 339

Query: 243 -------QKAERSKLGKRLVMASYNLGISPIRGRPEISLCNAK-GKKFQEMMTLAKSSCF 275
                   K E +++GKRLVMAS  LGIS  + RP IS+   K GK      +L +S  F
Sbjct: 340 SRPGTSRDKLEITEVGKRLVMASNTLGISSSKQRPAISISRFKDGKLLGLDSSLVRSMVF 395

The following BLAST results are available for this feature:

BLAST of MELO3C024948T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K319_CUCSA	9.0e-133	89.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G122360 PE=4 SV=1	[more]
D7UAI5_VITVI	1.6e-12	29.97	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g00660 PE=4 SV=...	[more]
A5ATX5_VITVI	1.6e-12	29.97	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042361 PE=4 SV=1	[more]
W9REF4_9ROSA	6.9e-08	24.42	Uncharacterized protein OS=Morus notabilis GN=L484_007792 PE=4 SV=1	[more]
M5W0D6_PRUPE	9.0e-08	25.19	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014770mg PE=4 SV=1	[more]

BLAST of MELO3C024948T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659126100\|ref\|XP_008463010.1\|	3.5e-154	100.00	PREDICTED: uncharacterized protein LOC103501255 [Cucumis melo]	[more]
gi\|778725386\|ref\|XP_004151358.2\|	1.3e-132	89.05	PREDICTED: uncharacterized protein LOC101220553 [Cucumis sativus]	[more]
gi\|731433296\|ref\|XP_010644590.1\|	2.3e-12	29.97	PREDICTED: uncharacterized protein LOC104877623 isoform X2 [Vitis vinifera]	[more]
gi\|147837900\|emb\|CAN67146.1\|	2.3e-12	29.97	hypothetical protein VITISV_042361 [Vitis vinifera]	[more]
gi\|731433294\|ref\|XP_010644589.1\|	2.3e-12	29.97	PREDICTED: uncharacterized protein LOC104877623 isoform X1 [Vitis vinifera]	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C024948	MELO3C024948	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C024948T1	MELO3C024948T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C024948T1.cds1	MELO3C024948T1.cds1	CDS