MELO3C024731T1 (mRNA) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAATTTCAAGGGATCAAAATTTGCAACTACATCCTACAAATATATTTGAGAAGGAACTTCAAAATAAGGAGATTCAAAATGTTGCAGGTAAGTTACGCACGATTGATTTCATTCAAAAGATTCCTTACAATGTAGATCATACACTTTTTTATGTTGAGATAAGGAACTTTGTTTGTCTGCGTGTTTTGAAGATGTCTAGTTATAAGTTATCGAAGTCAATTAATCAATTGAAACACTTGAGATATCTAGAAATTTCAAGTTACTCAATGAGATTAAGATCTCTAGAGTCTATTGGTTCACTTCATAATTTGCAAACATTGAAGTTATTAGTCTCAATTATTGAAGAATTTCCAACGAACTTTACAAATTTGGTAAATTTAAGACACTTGGAAGTCACTGTGATTGATTACAAGACGCCTCCACGTTTAAGTCAATTGACTCAACTTCAAACGTTGTCTCATTTTGCAATCGGGTTTGAGAAAGGTTGTAAGATTACTGAATTGGGGCCATTGAAAAACTTGCAAGGTAGTTTGAGACTTTTTTGTTTGGAGAAAGTTGAAAGTAAAGAGGAAGCAAATGGAGCATATTTTGTAGATAAGGAGAATTTAAAAAAGCTAAAGTTAAGTTGGAACATGGAAAGAAAAAATAACAACAGGTACAATGATTTGGAAGTGTTGGAAAGACTTCAACCAAACAAAAATCTCCAATCATTAATTATCCATGGCTTTGCAGGAAGACGTTTGCCTAACAATATTTTTGTTGAGAATTTAAGAGAGATATGTTTGTCTTATTGTAATAGTTGTGAAAAGCTTCCAATGCTTGGACAATTAAACAACCTAAAGAAACTTCATATTGTCGGCTTTCAAGGTGTCCAAATTATGGACAACGAGTTTTTTGGTAATGATTCAAACCAAAGAAGATTCTTCCCAAAGCTTGAGAAATTTTTAATGCAGAATATGATCAACTTAGAGCAATGGGAAGAAGTAATGACAAATGATGCATCATCTGATGTTACAATTTTTCCCAATCTTAAATGGTTGGAAATAATTAGTTGTCCCAAATTATTAAACATTCCAGAAGTTTTTTATGAGAATAGTGTGCAACACCTTGAAGGATTGACTGTTTCATACTATAACAAATTAAGAAAACTTCCAAATGGACTACACTTTTGTAGTTCCATCCGACATGTGAAAATAGATCAATGTTCAAATTTGACCATAAATATGAGAAACAAGTCGGAATTGTGTTATTTTTAGGCATTGGTCCGTTGGAGAAGCTGCCAGAAGGTTTATGTCATCTCATGAATTTGAGGAGAACGAGAATTGTTGGAAATATGCAGAATTATGATTTTGACTTCCTTCATTACCTTCCTTCCCTTAAACAAATTACTTTAGTCGAGGATGAGTTGGGCGATAATAGAGTAGAACAAATTCCTCAACAACTTCAACACCTCACTGCCTTGGAATCTCTTTGCATTGAAAATTTTGGAGGCATTATTAAGAAGCTTTGCCAGAATGGTTAGGAAACTTTGTATGTTTGCAATCACTTGAACTTTGTAATTGCAAAAATTTGAAAAGCCTGCCTTCTACAGAAGCAATGCTACGTCTCACCAAATTAAATTTATTGTATGCTTATAAATGTCCAGAGCTACTACTTGACGAAGGGGACATGGAGCGGGCAAAACTTTCCCACCTTCCACAAATTCAGATTTCTCTTCATAAATAG ATGGCAATTTCAAGGGATCAAAATTTGCAACTACATCCTACAAATATATTTGAGAAGGAACTTCAAAATAAGGAGATTCAAAATGTTGCAGGAAGACGTTTGCCTAACAATATTTTTGTTGAGAATTTAAGAGAGATATGTTTGTCTTATTGTAATAGTTGTGAAAAGCTTCCAATGCTTGGACAATTAAACAACCTAAAGAAACTTCATATTGTCGGCTTTCAAGGTGTCCAAATTATGGACAACGAGTTTTTTGGCATTGGTCCGTTGGAGAAGCTGCCAGAAGGTTTATGTCATCTCATGAATTTGAGGAGAACGAGAATTGTTGGAAATATGCAGAATTATGATTTTGACTTCCTTCATTACCTTCCTTCCCTTAAACAAATTACTTTAGTCGAGGATGAGTTGGGCGATAATAGAGTAGAACAAATTCCTCAACAACTTCAACACCTCACTGCCTTGGAATCTCTTTGCATTGAAAATTTTGGAGGCATTATTAAGAAGCTTTGCCAGAATGAGCTACTACTTGACGAAGGGGACATGGAGCGGGCAAAACTTTCCCACCTTCCACAAATTCAGATTTCTCTTCATAAATAG ATGGCAATTTCAAGGGATCAAAATTTGCAACTACATCCTACAAATATATTTGAGAAGGAACTTCAAAATAAGGAGATTCAAAATGTTGCAGGAAGACGTTTGCCTAACAATATTTTTGTTGAGAATTTAAGAGAGATATGTTTGTCTTATTGTAATAGTTGTGAAAAGCTTCCAATGCTTGGACAATTAAACAACCTAAAGAAACTTCATATTGTCGGCTTTCAAGGTGTCCAAATTATGGACAACGAGTTTTTTGGCATTGGTCCGTTGGAGAAGCTGCCAGAAGGTTTATGTCATCTCATGAATTTGAGGAGAACGAGAATTGTTGGAAATATGCAGAATTATGATTTTGACTTCCTTCATTACCTTCCTTCCCTTAAACAAATTACTTTAGTCGAGGATGAGTTGGGCGATAATAGAGTAGAACAAATTCCTCAACAACTTCAACACCTCACTGCCTTGGAATCTCTTTGCATTGAAAATTTTGGAGGCATTATTAAGAAGCTTTGCCAGAATGAGCTACTACTTGACGAAGGGGACATGGAGCGGGCAAAACTTTCCCACCTTCCACAAATTCAGATTTCTCTTCATAAATAG MAISRDQNLQLHPTNIFEKELQNKEIQNVAGRRLPNNIFVENLREICLSYCNSCEKLPMLGQLNNLKKLHIVGFQGVQIMDNEFFGIGPLEKLPEGLCHLMNLRRTRIVGNMQNYDFDFLHYLPSLKQITLVEDELGDNRVEQIPQQLQHLTALESLCIENFGGIIKKLCQNELLLDEGDMERAKLSHLPQIQISLHK*
BLAST of MELO3C024731T1 vs. TrEMBL
Match: Q694W1_CUCME (Fom-2 protein (Fragment) OS=Cucumis melo GN=Fom-2 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.0e-33 Identity = 96/201 (47.76%), Postives = 109/201 (54.23%), Query Frame = 1
BLAST of MELO3C024731T1 vs. TrEMBL
Match: Q694W1_CUCME (Fom-2 protein (Fragment) OS=Cucumis melo GN=Fom-2 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.6e-17 Identity = 57/121 (47.11%), Postives = 74/121 (61.16%), Query Frame = 1
HSP 2 Score: 136.3 bits (342), Expect = 3.9e-29 Identity = 89/198 (44.95%), Postives = 111/198 (56.06%), Query Frame = 1
BLAST of MELO3C024731T1 vs. TrEMBL
Match: Q694W4_CUCME (Fom-2 protein (Fragment) OS=Cucumis melo GN=Fom-2 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.1e-15 Identity = 62/149 (41.61%), Postives = 85/149 (57.05%), Query Frame = 1
HSP 2 Score: 134.8 bits (338), Expect = 1.1e-28 Identity = 89/198 (44.95%), Postives = 110/198 (55.56%), Query Frame = 1
BLAST of MELO3C024731T1 vs. TrEMBL
Match: Q2V727_CUCME (R-FOM-2 OS=Cucumis melo PE=3 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.1e-15 Identity = 62/149 (41.61%), Postives = 85/149 (57.05%), Query Frame = 1
HSP 2 Score: 65.9 bits (159), Expect = 6.5e-08 Identity = 60/177 (33.90%), Postives = 90/177 (50.85%), Query Frame = 1
HSP 3 Score: 132.9 bits (333), Expect = 4.4e-28 Identity = 87/198 (43.94%), Postives = 110/198 (55.56%), Query Frame = 1
BLAST of MELO3C024731T1 vs. TrEMBL
Match: Q6E436_CUCME (FOM-2 OS=Cucumis melo GN=Fom-2 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.5e-15 Identity = 62/149 (41.61%), Postives = 83/149 (55.70%), Query Frame = 1
HSP 2 Score: 67.0 bits (162), Expect = 2.9e-08 Identity = 61/177 (34.46%), Postives = 89/177 (50.28%), Query Frame = 1
HSP 3 Score: 132.9 bits (333), Expect = 4.4e-28 Identity = 87/198 (43.94%), Postives = 110/198 (55.56%), Query Frame = 1
BLAST of MELO3C024731T1 vs. NCBI nr
Match: gi|50428776|gb|AAT77098.1| (Fom-2 protein [Cucumis melo]) HSP 1 Score: 150.6 bits (379), Expect = 2.9e-33 Identity = 96/201 (47.76%), Postives = 109/201 (54.23%), Query Frame = 1
BLAST of MELO3C024731T1 vs. NCBI nr
Match: gi|50428776|gb|AAT77098.1| (Fom-2 protein [Cucumis melo]) HSP 1 Score: 97.8 bits (242), Expect = 2.2e-17 Identity = 57/121 (47.11%), Postives = 74/121 (61.16%), Query Frame = 1
HSP 2 Score: 136.3 bits (342), Expect = 5.7e-29 Identity = 89/198 (44.95%), Postives = 111/198 (56.06%), Query Frame = 1
BLAST of MELO3C024731T1 vs. NCBI nr
Match: gi|50428768|gb|AAT77094.1| (Fom-2 protein, partial [Cucumis melo]) HSP 1 Score: 91.7 bits (226), Expect = 1.6e-15 Identity = 62/149 (41.61%), Postives = 85/149 (57.05%), Query Frame = 1
HSP 2 Score: 135.6 bits (340), Expect = 9.7e-29 Identity = 74/132 (56.06%), Postives = 90/132 (68.18%), Query Frame = 1
BLAST of MELO3C024731T1 vs. NCBI nr
Match: gi|659125623|ref|XP_008462780.1| (PREDICTED: disease resistance protein RGA2-like [Cucumis melo]) HSP 1 Score: 96.3 bits (238), Expect = 6.5e-17 Identity = 46/68 (67.65%), Postives = 55/68 (80.88%), Query Frame = 1
HSP 2 Score: 57.8 bits (138), Expect = 2.6e-05 Identity = 46/127 (36.22%), Postives = 65/127 (51.18%), Query Frame = 1
HSP 3 Score: 134.8 bits (338), Expect = 1.6e-28 Identity = 89/198 (44.95%), Postives = 110/198 (55.56%), Query Frame = 1
BLAST of MELO3C024731T1 vs. NCBI nr
Match: gi|82794018|gb|ABB91438.1| (R-FOM-2 [Cucumis melo]) HSP 1 Score: 91.7 bits (226), Expect = 1.6e-15 Identity = 62/149 (41.61%), Postives = 85/149 (57.05%), Query Frame = 1
HSP 2 Score: 65.9 bits (159), Expect = 9.4e-08 Identity = 60/177 (33.90%), Postives = 90/177 (50.85%), Query Frame = 1
HSP 3 Score: 132.9 bits (333), Expect = 6.3e-28 Identity = 87/198 (43.94%), Postives = 110/198 (55.56%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
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