MELO3C024497.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C024497.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Threonine dehydratase
Location	chr08 : 9908942 .. 9909509 (-)
Sequence length	453

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAATCTTCCCAAAGAAGCATTAGAAAGCGGAGTCATTTGTGCTTCAGCTGGAAATCATGCACAAGGGGTTGCATTAGCTGCTGGAAGATTAAGAACTGAGGCCGTCATCGTCATGCCTCGTTCCACTCCTCCAATTAAGGTCACACTCTTTTTTTTTAATTACGACTTAAAAGTTACAAATTTAGTTCACGAAGTTTGAAGCAGCTGTCAGAGAAAAACAGACATTTGTTCCCTTACATTTTAAAACATTACAGATAGAGGCAGTTCGGAGTTTAGGTGGAAATGTTGTTTTGCACGGAGATACTTTTGATGACGCGCAAGAATATGCTCAACAACTGAGTAAAGTACGTAACCTTACAATCATCCCTCCTTTCGATAACGAAAATGTCATTATAGGTCAAGGAACAGTTGGAATGGAAATTGGACGTCAAATGAGAGGTCCATTACATGCAATTTTTGTCCCGGTCGGGGGTGGCGGTCTTCTAGCCGGTGTTGCTTCATTTTACAAGCTAGTTTTTCCTGAGGTAAAAGCTCAGTTGTTCCTGTCTGTATTAAACATTTAG

mRNA sequence

ATGGCCAATCTTCCCAAAGAAGCATTAGAAAGCGGAGTCATTTGTGCTTCAGCTGGAAATCATGCACAAGGGGTTGCATTAGCTGCTGGAAGATTAAGAACTGAGGCCGTCATCGTCATGCCTCGTTCCACTCCTCCAATTAAGATAGAGGCAGTTCGGAGTTTAGGTGGAAATGTTGTTTTGCACGGAGATACTTTTGATGACGCGCAAGAATATGCTCAACAACTGAGTAAAGTACGTAACCTTACAATCATCCCTCCTTTCGATAACGAAAATGTCATTATAGGTCAAGGAACAGTTGGAATGGAAATTGGACGTCAAATGAGAGGTCCATTACATGCAATTTTTGTCCCGGTCGGGGGTGGCGGTCTTCTAGCCGGTGTTGCTTCATTTTACAAGCTAGTTTTTCCTGAGGTAAAAGCTCAGTTGTTCCTGTCTGTATTAAACATTTAG

Coding sequence (CDS)

ATGGCCAATCTTCCCAAAGAAGCATTAGAAAGCGGAGTCATTTGTGCTTCAGCTGGAAATCATGCACAAGGGGTTGCATTAGCTGCTGGAAGATTAAGAACTGAGGCCGTCATCGTCATGCCTCGTTCCACTCCTCCAATTAAGATAGAGGCAGTTCGGAGTTTAGGTGGAAATGTTGTTTTGCACGGAGATACTTTTGATGACGCGCAAGAATATGCTCAACAACTGAGTAAAGTACGTAACCTTACAATCATCCCTCCTTTCGATAACGAAAATGTCATTATAGGTCAAGGAACAGTTGGAATGGAAATTGGACGTCAAATGAGAGGTCCATTACATGCAATTTTTGTCCCGGTCGGGGGTGGCGGTCTTCTAGCCGGTGTTGCTTCATTTTACAAGCTAGTTTTTCCTGAGGTAAAAGCTCAGTTGTTCCTGTCTGTATTAAACATTTAG

Protein sequence

MANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIEAVRSLGGNVVLHGDTFDDAQEYAQQLSKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVGGGGLLAGVASFYKLVFPEVKAQLFLSVLNI

Homology

[Close]

BLAST of MELO3C024497.2.1 vs. NCBI nr
Match: XP_004143369.1 (PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Cucumis sativus] >KGN48214.1 hypothetical protein Csa_6G448720 [Cucumis sativus])

HSP 1 Score: 267.3 bits (682), Expect = 3.1e-68
Identity = 133/140 (95.00%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIEAVRSLGGNVV 60
           MANLPKEALE GVICASAGNHAQGVALAAGRLRTEA+IVMPRSTPPIKIEAVRSLGGNV+
Sbjct: 174 MANLPKEALERGVICASAGNHAQGVALAAGRLRTEAIIVMPRSTPPIKIEAVRSLGGNVL 233

Query: 61  LHGDTFDDAQEYAQQLSKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVG 120
           LHGDTFDDAQE+A+QLSK RNLTIIPPFDNE+VIIGQGTVGMEIGRQMRGPLHAIFVPVG
Sbjct: 234 LHGDTFDDAQEHARQLSKERNLTIIPPFDNEDVIIGQGTVGMEIGRQMRGPLHAIFVPVG 293

Query: 121 GGGLLAGVASFYKLVFPEVK 141
           GGGLLAGVASFYKLVFPEVK
Sbjct: 294 GGGLLAGVASFYKLVFPEVK 313

[Close]

BLAST of MELO3C024497.2.1 vs. NCBI nr
Match: XP_008465584.1 (PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Cucumis melo])

HSP 1 Score: 223.4 bits (568), Expect = 5.2e-55
Identity = 109/140 (77.86%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 1   MANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIEAVRSLGGNVV 60
           M++LPKE LE GVI AS GNHAQGVA AA +L+T+++IVMPRSTPP KIEAV++LGGNVV
Sbjct: 121 MSSLPKEELEKGVISASTGNHAQGVAFAASKLKTQSLIVMPRSTPPNKIEAVKNLGGNVV 180

Query: 61  LHGDTFDDAQEYAQQLSKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVG 120
           L GDTFDDA E+A+QLS+ RNL IIPPFD+E++I+GQGTVGMEIGRQMR PL AIFVPVG
Sbjct: 181 LFGDTFDDALEHAKQLSQERNLKIIPPFDDEDIIVGQGTVGMEIGRQMREPLDAIFVPVG 240

Query: 121 GGGLLAGVASFYKLVFPEVK 141
           GGGLLAGVASFYKL++PEVK
Sbjct: 241 GGGLLAGVASFYKLIYPEVK 260

[Close]

BLAST of MELO3C024497.2.1 vs. NCBI nr
Match: XP_004143289.1 (PREDICTED: threonine dehydratase biosynthetic, chloroplastic [Cucumis sativus] >KGN48215.1 hypothetical protein Csa_6G448730 [Cucumis sativus])

HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52
Identity = 104/140 (74.29%), Postives = 123/140 (87.86%), Query Frame = 0


Query: 1   MANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIEAVRSLGGNVV 60
           M+ L K  LE GVICASAGNHAQGVALAA +L+T+++ VMPRSTPP KIEAV+ LGGNVV
Sbjct: 164 MSQLSKNDLEKGVICASAGNHAQGVALAASKLKTQSLTVMPRSTPPNKIEAVKKLGGNVV 223

Query: 61  LHGDTFDDAQEYAQQLSKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVG 120
           L GDTFDDA E+A+Q+ K +NL IIPPFDNE++I+GQGTVGMEIG QMR P+ AIFVPVG
Sbjct: 224 LFGDTFDDALEHAKQVCKEQNLKIIPPFDNEDIIVGQGTVGMEIGHQMREPVDAIFVPVG 283

Query: 121 GGGLLAGVASFYKLVFPEVK 141
           GGGL+AGVAS+YKLV+P+VK
Sbjct: 284 GGGLIAGVASYYKLVYPKVK 303

[Close]

BLAST of MELO3C024497.2.1 vs. NCBI nr
Match: XP_022925853.1 (threonine dehydratase biosynthetic, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 201.1 bits (510), Expect = 2.7e-48
Identity = 99/137 (72.26%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 4   LPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIEAVRSLGGNVVLHG 63
           LPKE L+ GVICASAGNHAQGVALA  RL+TEA IVMPR+TP IKI+AV  LGG V L G
Sbjct: 112 LPKEKLKKGVICASAGNHAQGVALAGQRLKTEAHIVMPRTTPQIKIDAVEDLGGIVELFG 171

Query: 64  DTFDDAQEYAQQLSKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVGGGG 123
           + F++AQ+ AQ+ SK  +LTIIPPFD+E+VI GQGT+GMEIGRQ+RG +HAIFVPVGGGG
Sbjct: 172 NDFNEAQKRAQERSKEEDLTIIPPFDDEDVIAGQGTIGMEIGRQIRGKIHAIFVPVGGGG 231

Query: 124 LLAGVASFYKLVFPEVK 141
           L AG+ SFYKLV+P+VK
Sbjct: 232 LAAGIVSFYKLVYPDVK 248

[Close]

BLAST of MELO3C024497.2.1 vs. NCBI nr
Match: XP_023543122.1 (threonine dehydratase biosynthetic, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.7 bits (504), Expect = 1.4e-47
Identity = 98/137 (71.53%), Postives = 116/137 (84.67%), Query Frame = 0


Query: 4   LPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIEAVRSLGGNVVLHG 63
           LPK+ L+ GVICASAGNHAQGVALA  RL+TEA IVMP +TP IKI+AV  LGG V L G
Sbjct: 99  LPKQKLKKGVICASAGNHAQGVALAGQRLKTEAHIVMPTTTPQIKIDAVEDLGGIVDLFG 158

Query: 64  DTFDDAQEYAQQLSKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVGGGG 123
           + F++AQE AQ+ SK  +LTIIPPFD+E+VI GQGT+GMEIGRQ+RG +HAIFVPVGGGG
Sbjct: 159 NDFNEAQERAQERSKEEDLTIIPPFDDEDVIAGQGTIGMEIGRQIRGKIHAIFVPVGGGG 218

Query: 124 LLAGVASFYKLVFPEVK 141
           L AG+ SFYKLV+P+VK
Sbjct: 219 LAAGIVSFYKLVYPDVK 235

[Close]

BLAST of MELO3C024497.2.1 vs. TAIR10
Match: AT3G10050.1 (L-O-methylthreonine resistant 1)

HSP 1 Score: 176.4 bits (446), Expect = 1.3e-44
Identity = 88/140 (62.86%), Postives = 108/140 (77.14%), Query Frame = 0


Query: 1   MANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIEAVRSLGGNVV 60
           M  LP + L  GVIC+SAGNHAQGVAL+A +L   AVIVMP +TP IK +AV +LG  VV
Sbjct: 149 MVKLPADQLAKGVICSSAGNHAQGVALSASKLGCTAVIVMPVTTPEIKWQAVENLGATVV 208

Query: 61  LHGDTFDDAQEYAQQLSKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVG 120
           L GD++D AQ +A+  ++   LT IPPFD+ +VI GQGTVGMEI RQ +GPLHAIFVPVG
Sbjct: 209 LFGDSYDQAQAHAKIRAEEEGLTFIPPFDHPDVIAGQGTVGMEITRQAKGPLHAIFVPVG 268

Query: 121 GGGLLAGVASFYKLVFPEVK 141
           GGGL+AG+A++ K V PEVK
Sbjct: 269 GGGLIAGIAAYVKRVSPEVK 288

[Close]

BLAST of MELO3C024497.2.1 vs. TAIR10
Match: AT4G11640.1 (serine racemase)

HSP 1 Score: 88.2 bits (217), Expect = 4.7e-18
Identity = 47/138 (34.06%), Postives = 78/138 (56.52%), Query Frame = 0


Query: 3   NLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIEAVRSLGGNVVLH 62
           +L  E    GV+  S+GNHA  ++LAA      A IV+P+  P  K++ V   GG V+  
Sbjct: 69  SLDAEQAAKGVVTHSSGNHAAALSLAAKIQGIPAYIVVPKGAPKCKVDNVIRYGGKVIWS 128

Query: 63  GDTFDDAQEYAQQLSKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVGGG 122
             T    +E A ++ +     +I P+++  +I GQGT+ +E+  Q++  + AI VP+ GG
Sbjct: 129 EATMSSREEIASKVLQETGSVLIHPYNDGRIISGQGTIALELLEQIQ-EIDAIVVPISGG 188

Query: 123 GLLAGVASFYKLVFPEVK 141
           GL++GVA   K + P ++
Sbjct: 189 GLISGVALAAKSIKPSIR 205

[Close]

BLAST of MELO3C024497.2.1 vs. Swiss-Prot
Match: sp|Q9ZSS6|THD1_ARATH (Threonine dehydratase biosynthetic, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OMR1 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.4e-43
Identity = 88/140 (62.86%), Postives = 108/140 (77.14%), Query Frame = 0


Query: 1   MANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIEAVRSLGGNVV 60
           M  LP + L  GVIC+SAGNHAQGVAL+A +L   AVIVMP +TP IK +AV +LG  VV
Sbjct: 149 MVKLPADQLAKGVICSSAGNHAQGVALSASKLGCTAVIVMPVTTPEIKWQAVENLGATVV 208

Query: 61  LHGDTFDDAQEYAQQLSKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVG 120
           L GD++D AQ +A+  ++   LT IPPFD+ +VI GQGTVGMEI RQ +GPLHAIFVPVG
Sbjct: 209 LFGDSYDQAQAHAKIRAEEEGLTFIPPFDHPDVIAGQGTVGMEITRQAKGPLHAIFVPVG 268

Query: 121 GGGLLAGVASFYKLVFPEVK 141
           GGGL+AG+A++ K V PEVK
Sbjct: 269 GGGLIAGIAAYVKRVSPEVK 288

[Close]

BLAST of MELO3C024497.2.1 vs. Swiss-Prot
Match: sp|P25306|THD1_SOLLC (Threonine dehydratase biosynthetic, chloroplastic OS=Solanum lycopersicum OX=4081 GN=TD PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 5.8e-42
Identity = 86/140 (61.43%), Postives = 109/140 (77.86%), Query Frame = 0


Query: 1   MANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIEAVRSLGGNVV 60
           M+NL +E L+ GVI ASAGNHAQGVALA  RL   A IVMP +TP IKI+AVR+LGG+VV
Sbjct: 151 MSNLSREELDKGVITASAGNHAQGVALAGQRLNCVAKIVMPTTTPQIKIDAVRALGGDVV 210

Query: 61  LHGDTFDDAQEYAQQLSKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVG 120
           L+G TFD+AQ +A +LS+   L  IPPFD+  VI GQGT+G EI RQ++  +HA+F+PVG
Sbjct: 211 LYGKTFDEAQTHALELSEKDGLKYIPPFDDPGVIKGQGTIGTEINRQLK-DIHAVFIPVG 270

Query: 121 GGGLLAGVASFYKLVFPEVK 141
           GGGL+AGVA+F+K + P  K
Sbjct: 271 GGGLIAGVATFFKQIAPNTK 289

[Close]

BLAST of MELO3C024497.2.1 vs. Swiss-Prot
Match: sp|P53607|ILVA_BURM1 (L-threonine dehydratase biosynthetic IlvA OS=Burkholderia multivorans (strain ATCC 17616 / 249) OX=395019 GN=ilvA PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.1e-37
Identity = 78/143 (54.55%), Postives = 107/143 (74.83%), Query Frame = 0


Query: 1   MANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIEAVRSLGG--- 60
           MA++P +AL  GVI ASAGNHAQGVA +A R+  +AVIV+P +TP +K++AVR+ GG   
Sbjct: 60  MAHIPADALARGVITASAGNHAQGVAFSAARMGVKAVIVVPVTTPQVKVDAVRAHGGPGV 119

Query: 61  NVVLHGDTFDDAQEYAQQLSKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFV 120
            V+  G+++ DA  +A ++ + R LT + PFD+  VI GQGT+ MEI RQ +GP+HAIFV
Sbjct: 120 EVIQAGESYSDAYAHALKVQEERGLTFVHPFDDPYVIAGQGTIAMEILRQHQGPIHAIFV 179

Query: 121 PVGGGGLLAGVASFYKLVFPEVK 141
           P+GGGGL AGVA++ K V PE+K
Sbjct: 180 PIGGGGLAAGVAAYVKAVRPEIK 202

[Close]

BLAST of MELO3C024497.2.1 vs. Swiss-Prot
Match: sp|Q9CKJ2|ILVA_PASMU (L-threonine dehydratase biosynthetic IlvA OS=Pasteurella multocida (strain Pm70) OX=272843 GN=ilvA PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 4.0e-35
Identity = 76/140 (54.29%), Postives = 99/140 (70.71%), Query Frame = 0


Query: 1   MANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIEAVRSLGGNVV 60
           +A L  E   SGVI ASAGNHAQGVAL+A  L   A+IVMP++TP IK++AVR  GG V+
Sbjct: 69  IAGLSAEQKASGVIAASAGNHAQGVALSAKHLGLRALIVMPQNTPSIKVDAVRGFGGEVL 128

Query: 61  LHGDTFDDAQEYAQQLSKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVG 120
           LHG  FD+A+  A +L++ +N+T IPPFD+  VI GQG++ ME+  Q    +  IFVPVG
Sbjct: 129 LHGANFDEAKAKAIELAESKNMTFIPPFDHPAVIAGQGSIAMEL-LQQNSQIDRIFVPVG 188

Query: 121 GGGLLAGVASFYKLVFPEVK 141
           GGGL AG+A   K + PE+K
Sbjct: 189 GGGLAAGIAVLIKQLMPEIK 207

[Close]

BLAST of MELO3C024497.2.1 vs. Swiss-Prot
Match: sp|P46493|ILVA_HAEIN (L-threonine dehydratase biosynthetic IlvA OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=ilvA PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.0e-34
Identity = 77/140 (55.00%), Postives = 102/140 (72.86%), Query Frame = 0


Query: 1   MANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIEAVRSLGGNVV 60
           +++L  E   +GVI ASAGNHAQGVAL+A +L  +A+IVMP++TP IK++AVR  GG V+
Sbjct: 71  ISSLSAEQKAAGVIAASAGNHAQGVALSAKQLGLKALIVMPQNTPSIKVDAVRGFGGEVL 130

Query: 61  LHGDTFDDAQEYAQQLSKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVG 120
           LHG  FD+A+  A +LSK +N+T IPPFD+  VI GQGT+ ME+ +Q+   L  +FV VG
Sbjct: 131 LHGANFDEAKAKAIELSKEKNMTFIPPFDHPLVIAGQGTLAMEMLQQV-ADLDYVFVQVG 190

Query: 121 GGGLLAGVASFYKLVFPEVK 141
           GGGL AGVA   K   PE+K
Sbjct: 191 GGGLAAGVAILLKQFMPEIK 209

[Close]

BLAST of MELO3C024497.2.1 vs. TrEMBL
Match: tr|A0A0A0KHC3|A0A0A0KHC3_CUCSA (Threonine dehydratase OS=Cucumis sativus OX=3659 GN=Csa_6G448720 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.1e-68
Identity = 133/140 (95.00%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIEAVRSLGGNVV 60
           MANLPKEALE GVICASAGNHAQGVALAAGRLRTEA+IVMPRSTPPIKIEAVRSLGGNV+
Sbjct: 174 MANLPKEALERGVICASAGNHAQGVALAAGRLRTEAIIVMPRSTPPIKIEAVRSLGGNVL 233

Query: 61  LHGDTFDDAQEYAQQLSKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVG 120
           LHGDTFDDAQE+A+QLSK RNLTIIPPFDNE+VIIGQGTVGMEIGRQMRGPLHAIFVPVG
Sbjct: 234 LHGDTFDDAQEHARQLSKERNLTIIPPFDNEDVIIGQGTVGMEIGRQMRGPLHAIFVPVG 293

Query: 121 GGGLLAGVASFYKLVFPEVK 141
           GGGLLAGVASFYKLVFPEVK
Sbjct: 294 GGGLLAGVASFYKLVFPEVK 313

[Close]

BLAST of MELO3C024497.2.1 vs. TrEMBL
Match: tr|A0A1S3CP75|A0A1S3CP75_CUCME (Threonine dehydratase OS=Cucumis melo OX=3656 GN=LOC103503221 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 3.4e-55
Identity = 109/140 (77.86%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 1   MANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIEAVRSLGGNVV 60
           M++LPKE LE GVI AS GNHAQGVA AA +L+T+++IVMPRSTPP KIEAV++LGGNVV
Sbjct: 121 MSSLPKEELEKGVISASTGNHAQGVAFAASKLKTQSLIVMPRSTPPNKIEAVKNLGGNVV 180

Query: 61  LHGDTFDDAQEYAQQLSKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVG 120
           L GDTFDDA E+A+QLS+ RNL IIPPFD+E++I+GQGTVGMEIGRQMR PL AIFVPVG
Sbjct: 181 LFGDTFDDALEHAKQLSQERNLKIIPPFDDEDIIVGQGTVGMEIGRQMREPLDAIFVPVG 240

Query: 121 GGGLLAGVASFYKLVFPEVK 141
           GGGLLAGVASFYKL++PEVK
Sbjct: 241 GGGLLAGVASFYKLIYPEVK 260

[Close]

BLAST of MELO3C024497.2.1 vs. TrEMBL
Match: tr|A0A0A0KET0|A0A0A0KET0_CUCSA (Threonine dehydratase OS=Cucumis sativus OX=3659 GN=Csa_6G448730 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.2e-52
Identity = 104/140 (74.29%), Postives = 123/140 (87.86%), Query Frame = 0


Query: 1   MANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIEAVRSLGGNVV 60
           M+ L K  LE GVICASAGNHAQGVALAA +L+T+++ VMPRSTPP KIEAV+ LGGNVV
Sbjct: 164 MSQLSKNDLEKGVICASAGNHAQGVALAASKLKTQSLTVMPRSTPPNKIEAVKKLGGNVV 223

Query: 61  LHGDTFDDAQEYAQQLSKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVG 120
           L GDTFDDA E+A+Q+ K +NL IIPPFDNE++I+GQGTVGMEIG QMR P+ AIFVPVG
Sbjct: 224 LFGDTFDDALEHAKQVCKEQNLKIIPPFDNEDIIVGQGTVGMEIGHQMREPVDAIFVPVG 283

Query: 121 GGGLLAGVASFYKLVFPEVK 141
           GGGL+AGVAS+YKLV+P+VK
Sbjct: 284 GGGLIAGVASYYKLVYPKVK 303

[Close]

BLAST of MELO3C024497.2.1 vs. TrEMBL
Match: tr|A0A1S3CH38|A0A1S3CH38_CUCME (Threonine dehydratase OS=Cucumis melo OX=3656 GN=LOC103500853 PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.0e-47
Identity = 93/140 (66.43%), Postives = 117/140 (83.57%), Query Frame = 0


Query: 1   MANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIEAVRSLGGNVV 60
           ++ LPK+ L +GVICASAGNHAQGVAL+A RL+ +A IVMP +TP IK+EAV+ LGG V+
Sbjct: 174 ISQLPKDQLANGVICASAGNHAQGVALSAQRLKIKAQIVMPTTTPAIKVEAVKRLGGKVI 233

Query: 61  LHGDTFDDAQEYAQQLSKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVG 120
             G+TFD++Q+ A+++S    +T IPPFDNE+VI GQGTVGMEIGRQMRG +HAI VP+G
Sbjct: 234 QEGETFDESQKIAKEISSRLGITFIPPFDNEDVIAGQGTVGMEIGRQMRGKIHAIIVPIG 293

Query: 121 GGGLLAGVASFYKLVFPEVK 141
           GGGL AG+ SFYKLV+PEVK
Sbjct: 294 GGGLAAGIVSFYKLVYPEVK 313

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BLAST of MELO3C024497.2.1 vs. TrEMBL
Match: tr|A0A0A0KKC3|A0A0A0KKC3_CUCSA (Threonine dehydratase OS=Cucumis sativus OX=3659 GN=Csa_6G448740 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.7e-46
Identity = 92/140 (65.71%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 1   MANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIEAVRSLGGNVV 60
           ++ L K+ L++GVICASAGNHAQGVAL+A RL+ +A IVMP +TP IK++AV+ LGG V+
Sbjct: 174 ISQLSKDDLKNGVICASAGNHAQGVALSAQRLKIKAQIVMPTTTPTIKVDAVKRLGGTVI 233

Query: 61  LHGDTFDDAQEYAQQLSKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVG 120
             GDTFD++Q+ A+++S    +T IPP+DNE+VI GQGTVGMEIGRQMRG +HAIFVP+G
Sbjct: 234 QKGDTFDESQKIAKEISCRCGITFIPPYDNEDVIAGQGTVGMEIGRQMRGKIHAIFVPIG 293

Query: 121 GGGLLAGVASFYKLVFPEVK 141
           GGGL AG+ SFYKLV+PEVK
Sbjct: 294 GGGLAAGIVSFYKLVYPEVK 313

The following BLAST results are available for this feature:

BLAST of MELO3C024497.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143369.1	3.1e-68	95.00	PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Cucumis sativ...	[more]
XP_008465584.1	5.2e-55	77.86	PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Cucumis melo]	[more]
XP_004143289.1	1.8e-52	74.29	PREDICTED: threonine dehydratase biosynthetic, chloroplastic [Cucumis sativus] >...	[more]
XP_022925853.1	2.7e-48	72.26	threonine dehydratase biosynthetic, chloroplastic-like [Cucurbita moschata]	[more]
XP_023543122.1	1.4e-47	71.53	threonine dehydratase biosynthetic, chloroplastic-like [Cucurbita pepo subsp. pe...	[more]

BLAST of MELO3C024497.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10050.1	1.3e-44	62.86	L-O-methylthreonine resistant 1	[more]
AT4G11640.1	4.7e-18	34.06	serine racemase	[more]

BLAST of MELO3C024497.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZSS6\|THD1_ARATH	2.4e-43	62.86	Threonine dehydratase biosynthetic, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
sp\|P25306\|THD1_SOLLC	5.8e-42	61.43	Threonine dehydratase biosynthetic, chloroplastic OS=Solanum lycopersicum OX=408...	[more]
sp\|P53607\|ILVA_BURM1	1.1e-37	54.55	L-threonine dehydratase biosynthetic IlvA OS=Burkholderia multivorans (strain AT...	[more]
sp\|Q9CKJ2\|ILVA_PASMU	4.0e-35	54.29	L-threonine dehydratase biosynthetic IlvA OS=Pasteurella multocida (strain Pm70)...	[more]
sp\|P46493\|ILVA_HAEIN	2.0e-34	55.00	L-threonine dehydratase biosynthetic IlvA OS=Haemophilus influenzae (strain ATCC...	[more]

BLAST of MELO3C024497.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KHC3\|A0A0A0KHC3_CUCSA	2.1e-68	95.00	Threonine dehydratase OS=Cucumis sativus OX=3659 GN=Csa_6G448720 PE=3 SV=1	[more]
tr\|A0A1S3CP75\|A0A1S3CP75_CUCME	3.4e-55	77.86	Threonine dehydratase OS=Cucumis melo OX=3656 GN=LOC103503221 PE=3 SV=1	[more]
tr\|A0A0A0KET0\|A0A0A0KET0_CUCSA	1.2e-52	74.29	Threonine dehydratase OS=Cucumis sativus OX=3659 GN=Csa_6G448730 PE=3 SV=1	[more]
tr\|A0A1S3CH38\|A0A1S3CH38_CUCME	2.0e-47	66.43	Threonine dehydratase OS=Cucumis melo OX=3656 GN=LOC103500853 PE=3 SV=1	[more]
tr\|A0A0A0KKC3\|A0A0A0KKC3_CUCSA	1.7e-46	65.71	Threonine dehydratase OS=Cucumis sativus OX=3659 GN=Csa_6G448740 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR036052	Trypto_synt_PLP_dependent
IPR001926	PLP-dep

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009082	branched-chain amino acid biosynthetic process
biological_process	GO:0008652	cellular amino acid biosynthetic process
biological_process	GO:0006520	cellular amino acid metabolic process
biological_process	GO:0009097	isoleucine biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004794	L-threonine ammonia-lyase activity
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0030170	pyridoxal phosphate binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C024497.2	MELO3C024497.2	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C024497.2.1.exon.2	MELO3C024497.2.1.exon.2	exon
MELO3C024497.2.1.exon.1	MELO3C024497.2.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C024497.2.1.CDS.2	MELO3C024497.2.1.CDS.2	CDS
MELO3C024497.2.1.CDS.1	MELO3C024497.2.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C024497.2.1	MELO3C024497.2.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.50.1100		coord: 89..140 e-value: 5.2E-57 score: 195.1
None	No IPR available	GENE3D	G3DSA:3.40.50.1100		coord: 1..88 e-value: 5.2E-57 score: 195.1
None	No IPR available	PANTHER	PTHR43714	FAMILY NOT NAMED	coord: 1..140
IPR001926	Pyridoxal-phosphate dependent enzyme	PFAM	PF00291	PALP	coord: 11..140 e-value: 2.1E-37 score: 129.1
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	SUPERFAMILY	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes	coord: 4..140