MELO3C023357.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAATCGTTTAGACGCCGTTATCTCCATTGTTGGTCCAAATCAAATCAAAACCACAATAAACAATAATACAAAGCCATCTAAAGAAGAAGAAGAAGAAGAAAGAGAGAGATGAGCTTTTCATCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCTCTCAAAGACACTCTCAACTGGGCCGTTCATCGCCATCTCTTTTACAAAGATGTATTTGTTTTCTTCATCCCCATTTCCCACTTCATTGTTTTGACATTTCTTCGATTTTGTCATTGATTCTTCTAATCTTCCTTTGATTCAGGCGTCGGACCTTCGGGAGAGATTCGAAGCGAACAGACATGTGGTTTGTTCTCTCTCTGTTCCTTTGATCGATTTTTTTTGTTCTTTTTCTATGTTTTCGTTGAGTATAAATTTCATGCATTTCGACCTCTTGTGAGTTAATTGATATAGGGGTGTGGATATGAAATGATGAAGGGTTTTTTTTTTTTTTGGGGGGGGGGGGGGGNGCGGCTGGATTGATTGTTTCAGCTGTACACTCTTCTTTCACTTGCATGGATTTTTCTTTCAAGCATTTTTTTGTGTAAATTGTCTTGCGTTACTTGATGAGATATTAAAATGTGGTTTTTATTGATAGTTTTGGATGAACGATCTAGTGGAGTGATTTTGAAATTGTTAAATTCACTTTTGTTGTGTTTAAGATCATTTTGAAACACATTTGATTACTCAAAATCGAATCAATGTTTAATTTTACACTTTAAAGGCTTTTTTCATACTTTTAAAACTTATTCTGATTGATTAAAAGCATTTTCAGAGTAATTTTGAAAATGAAAAAAAGTGATTCTAACTATTTTAGAATCACTCTTAAACATGCGGCTAGTCTATTTGTTCTCTGGGATGAATATTACTGGTTGATCTTTGAATATCGTCTGCTTACTGCATCTGGAGAAGTGTGGATTTTGCGGAGAAATATTCTGATATCCTGGTAATCAAATATGACCATTTCCAGATTCAAATTTGTGTTCAACTAAGCAAGCATTCTCTTATAGAAATTATTTTCCTATAAATTTAAGTTTAACCATTGAGTTGCTTGTCTTACATGTGTTCATTGCTCTCTCTAGAACCATGGTGTTAAATAAGGAAAAAAAAAGTTCGAAGACTGATGTGGGACGGCAGTTAGAAACTTATGAGAATTAACTTGGAATTATACTTGAAACTTCAGACTTTGATGGGTTTTATTAATTACGCGTAAGACTTGGAGATCTGTTCTAGGACATTAGGTTAAAACTAAAATATTAGATCAGGGGTTCAAGCTGTGAAAGGTCTACATGTATAGATCAACGTGATTTTGTTCAGCAAGCCATGATTTCTATGCTATTGATCTATTGTTTATGGATCCTTTTTGGGGTGGATTTGCAGGAAGATCTTGACACAATAGATAAGCTGATAGAGAATGGGGAAGCTTCCTATGATAAGTGGCGCCATCCTGATCCCTATATCGGTAAGCACAATCATGAGTGAATTTGGTCATGTGGCAGTTAATAAAAGTAAGGTTGCCAAATCAAATGCTTTTACTGATTATGTAATATCTGTCCTGTAGATAGGGTATGTTTTCTGTTTATTTGAAATGCTGCTAAGTCGTTGATTTTCTTTTCCTCCCTTTTGAATAATAGAAACTGTATTGTTGAAACTTTATGAAGAAGATATTTCTAGTTTAATTTTAAAAAATAAAATACCCTATGGATTTCTCCATTCTAAGAATCAATTTAGTAGGTTGGAATAATAGTAACTAGCCATAAACTTTAGATTTTCCTTCAGATGTTGCTTCTTGAGCATCCAAGAATCTAAGATGCTTGCATGAAATTTTTTATATTATTTTTTTAATTTATATTTGTTGGGTGGGGTTTTTGCTACCCAAAGCCTGTAGATTCTTCCTTCTTTTGTTCTAATACAATATTGTTTCATATAAGTGAAAAAAAAAATTAAATGAGAAAGAGTGATGTATAAACACAAAATGTAGAACAACTGTAGGATGGGGGGAATGAGATACCCACTTCTGATACGAAGCAACATATTATATCGAAGCCTTCTAATTATTTGTAATAATGAGTAGGCTATAGTAAAAGTTCACATGGTTTGAAGTTGAACACTACCTAGTAGTATGCTACTATGCTCTAGATAAAAAATAATCCACTGAAGACAACCTATGTTGAAAATTCTCCCATTTCTCTTTTTCCATATCATGATTCACAAAATAGCCCCCACCGCACCACTCCATAAAATTGTGGTCTTCCCTTTAAAGGACATTCCCTCTAGGCTCTTCATTAGTCACCTATCAATCTTCTCAATGAGACATACAGCCAACTCAAAAAGCTTGAAAGAGGGAAAACTGTGCTGAGAAGAACAGGAGAATGGGCAGTGGGTAGCCTGTGATCCAAATATTCTCCCTCCTTCAAGCACAAACAGCGATGAAGACTCTCAGCAACTTATCTGAAGCATCAAGGCTTTTATGCATGACCAACCAAATGAAGAGCTTAACTTTCTTAGGCACCTTTCTCTTCCAGTTGTAGTTCACCATGGTAGTTTTAACTTCAGCCTTCAACTTAGTCAAGAAAGTTGGTGGTGAAAGATTATGACGTTCTGTGTTTATTAATATGCTTGGAAATAAAAATTTGTTGTGTTTATTTTGTATTAACTTCTCCATTAGAACGAAAGAAGATTAACACATGTACGACATTACTTGAACAGGATTTGTTCCATAGGTTGTACAAATTTGTCCTTGAGTTCTAAATAAGATTAACGCCTGTTCTGGCAATGTCAGTGTATCAGTTTATTGATGTTTATCTTATATATCATCAATGTCATTTTGATTTTTTTTTTAGATTCCTTATCATAAATTATATTAGCAATTAAGTTTGTTTTTGTATTTTCTATCTACCTTCAGATTAGAAGGGGTGAAGATTGCTGGGTTTATTGCCAAACAATACAAAATGGTGAGAGATTAATAGCATTATGATCTCAAAAGTCTAAAGAAGGGAGAGATAGTGAAATGAGCTATAGATGCCATGCAATCATGGAAACCTGGGTCTCCTAGTTGCTCAGTGTCCTTAATTTCAATAAATTTGACCCAGGCATATGTATACCATCCCCTTAACATCCATGATTACATCAAAGGAACTAGCACCGTATAGGGTATGAGGATTCTTCGTCACAAGACTTCATCCTTGCGTGCTTATCATCACCCTTGCAAAAACCTTTTCTGAAATATAAAATTCTTTTTTATGAAGTATGATGGTCTTTGATGAGTTTGGGAGAAGGAATCCTCAATTCTAGAGTATATTTATAGTTAACTGTTAGTTAAGTTGCAGACATGCGAATGTAAAAACAATTTGCTCCCCACTCCCTGATGGTTGCCAGCTGCTATCTAAAAGGCTAAAACTTTGAAGTATCATTTCATTGTTTGTTTCTCTGTTCTGCTTAGAACAAGAGAATCTATGCGGTCAATCCTAATTTCTTTTTACCTTTACTCTGTAGTTCCATGGGCTCCTGGTGGTTCTAAGTTTACAAGAAACCCAATTCCACCTGCAGGGGTAAGTTCTCTTTTGAAGATTGTTTGGGTTTTCTTTTCATAAAATTTTTTAGATCTTAATTCCTTCTCACCACTTCAGTTTTTTCTTGAAAAAGTATTATTTTTATTTATTTGCATATGTCTTGTAACTTGTTTTTATGCCTTATGGGACTATGTAGCTACATCATCAACAACCTTGTCAAGTTCTATAGATCATACAATTTTTTCCCCACGAAAAACCATATATCATCATCATTAACCACCACATCCTCAGTGCTTTTTAAGAGAGGTTATGGTGTAGAAACTACAAGTTAATTATAATGATCTGTGGTTGGTTTATTGCTCAAATGAAACGTCTACTAAAATCACAGTTTTGAAATATGTGTAGTTTTCACGTGGCATTGTTTTCCCAAAGGCCAAAGATAAGCATTTGTGTAAGCTAAACTTCCTTTGCCCTAATCTTGGAGGAAGCACATGAAAATGGAAAAGTTGAAGTTATTTTCCCAGGGATTAGAGCATAGGAACTCAGCTTCACACTCTTTCCCTTTTTTTTTCTTCTTTGGCTGTTTTAATCTGATATTTTGTTACGGGCTTGAGTTCTCTACTCTCTGTCCTTTGATTAATTTGCATGCAATTGTTAAGAGTGTAATCTCATCACTCAATATGACATCAACATCTATGTCTAATGATACAGATCGAGATCATATATGACTATGGGCGGGAAGATCACTGAAATCTTCATTATCGTGGTAATAAATAAAGGTAAGCTTACATTTGGCTGCTGATAGCAACAATGTCTATTTTCCCCCGTCTGAGTGTACCTCAAATTGGATTATAACTTAATGAACTATTATATCGTTCTTGTATTTTGTTTTTATTTCTTGCTTATTCTCTCTCTTGCTGAGTTTGTATCTTTCTTAGCATTAGAAAAAAATGTGTTTTGTTCGTAATGCTGACCAGTAGGAGGTTATGGTCCTTTACTGAGTGAAATTTACCCATTTTGTCTGATGTTGCTGAAAACAAATTTTAGAAAATTGCTCTACTGTTGCAAGTGCTCAAACTGCTTTCTAAAGCAACCATTTACGTAATATTACAATTAACTATAGTTCTCGATAAACAATGACTCAAGTTTTGGGTACCTTTTGCTTGGAGTTCTAATGTCGAACAAAATGTTTTGGTTTGACTATTGCAGGACGAAATGGTTCGTGGCCTCACGAGAGTTGATGATGATAAAAGGAGCTCTTTGATGTGTAAACTTGAATGAATACAATCATAGTATTTCCTTGTTGATTTGCTTTCTAGTTTTTGTTCAGATATGCAAATTTGACATAGAAAAAGTCACCATTGGAAGGATGTGTGATATGCTTCAACTTTTGGTTAATGTGATTTGTTCATCCTTTGCATATATCTACTTTCTGTTAATGTGGCCAATTTTTCTTTTTTTCCTTTTGGTGGGGAATTTGTCTGATTGCTTGTAGTAATGGCATCGGATGTTGGAAATGTGAGTGATGAATTACATGAACTAAAAGACTCAATAGGAAATCCTTTTAGTATTTGAAAAGCTTTTTGAAATTTTAATAAAATTGTGATAAAAGGATGTCTAAAAGCCAGTGGCTATGTCCATTTATATGC ATGAAAATCGTTTAGACGCCGTTATCTCCATTGTTGGTCCAAATCAAATCAAAACCACAATAAACAATAATACAAAGCCATCTAAAGAAGAAGAAGAAGAAGAAAGAGAGAGATGAGCTTTTCATCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCTCTCAAAGACACTCTCAACTGGGCCGTTCATCGCCATCTCTTTTACAAAGATGCGTCGGACCTTCGGGAGAGATTCGAAGCGAACAGACATGTGGAAGATCTTGACACAATAGATAAGCTGATAGAGAATGGGGAAGCTTCCTATGATAAGTGGCGCCATCCTGATCCCTATATCGTTCCATGGGCTCCTGGTGGTTCTAAGTTTACAAGAAACCCAATTCCACCTGCAGGGGACGAAATGGTTCGTGGCCTCACGAGAGTTGATGATGATAAAAGGAGCTCTTTGATGTGTAAACTTGAATGAATACAATCATAGTATTTCCTTGTTGATTTGCTTTCTAGTTTTTGTTCAGATATGCAAATTTGACATAGAAAAAGTCACCATTGGAAGGATGTGTGATATGCTTCAACTTTTGGTTAATGTGATTTGTTCATCCTTTGCATATATCTACTTTCTGTTAATGTGGCCAATTTTTCTTTTTTTCCTTTTGGTGGGGAATTTGTCTGATTGCTTGTAGTAATGGCATCGGATGTTGGAAATGTGAGTGATGAATTACATGAACTAAAAGACTCAATAGGAAATCCTTTTAGTATTTGAAAAGCTTTTTGAAATTTTAATAAAATTGTGATAAAAGGATGTCTAAAAGCCAGTGGCTATGTCCATTTATATGC ATGAGCTTTTCATCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCTCTCAAAGACACTCTCAACTGGGCCGTTCATCGCCATCTCTTTTACAAAGATGCGTCGGACCTTCGGGAGAGATTCGAAGCGAACAGACATGTGGAAGATCTTGACACAATAGATAAGCTGATAGAGAATGGGGAAGCTTCCTATGATAAGTGGCGCCATCCTGATCCCTATATCGTTCCATGGGCTCCTGGTGGTTCTAAGTTTACAAGAAACCCAATTCCACCTGCAGGGGACGAAATGGTTCGTGGCCTCACGAGAGTTGATGATGATAAAAGGAGCTCTTTGATGTGTAAACTTGAATGA MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVEDLDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGDEMVRGLTRVDDDKRSSLMCKLE
BLAST of MELO3C023357.2.1 vs. NCBI nr
Match: XP_008461019.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Cucumis melo]) HSP 1 Score: 222.6 bits (566), Expect = 7.4e-55 Identity = 107/115 (93.04%), Postives = 109/115 (94.78%), Query Frame = 0
BLAST of MELO3C023357.2.1 vs. NCBI nr
Match: XP_004150138.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Cucumis sativus] >KGN61854.1 hypothetical protein Csa_2G252030 [Cucumis sativus]) HSP 1 Score: 217.2 bits (552), Expect = 3.1e-53 Identity = 104/115 (90.43%), Postives = 108/115 (93.91%), Query Frame = 0
BLAST of MELO3C023357.2.1 vs. NCBI nr
Match: XP_022146081.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Momordica charantia]) HSP 1 Score: 210.3 bits (534), Expect = 3.8e-51 Identity = 100/115 (86.96%), Postives = 107/115 (93.04%), Query Frame = 0
BLAST of MELO3C023357.2.1 vs. NCBI nr
Match: XP_022944756.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X1 [Cucurbita moschata] >XP_022944757.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X1 [Cucurbita moschata] >XP_022986637.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X1 [Cucurbita maxima] >XP_022986638.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X1 [Cucurbita maxima] >XP_022986639.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X1 [Cucurbita maxima] >XP_023511797.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 205.3 bits (521), Expect = 1.2e-49 Identity = 96/115 (83.48%), Postives = 105/115 (91.30%), Query Frame = 0
BLAST of MELO3C023357.2.1 vs. NCBI nr
Match: XP_022763147.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like [Durio zibethinus]) HSP 1 Score: 204.1 bits (518), Expect = 2.7e-49 Identity = 96/117 (82.05%), Postives = 107/117 (91.45%), Query Frame = 0
BLAST of MELO3C023357.2.1 vs. TAIR10
Match: AT4G34700.1 (LYR family of Fe/S cluster biogenesis protein) HSP 1 Score: 184.9 bits (468), Expect = 3.1e-47 Identity = 87/108 (80.56%), Postives = 95/108 (87.96%), Query Frame = 0
BLAST of MELO3C023357.2.1 vs. Swiss-Prot
Match: sp|Q945M1|NDUB9_ARATH (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Arabidopsis thaliana OX=3702 GN=CIB22 PE=1 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 5.6e-46 Identity = 87/108 (80.56%), Postives = 95/108 (87.96%), Query Frame = 0
BLAST of MELO3C023357.2.1 vs. Swiss-Prot
Match: sp|Q02369|NDUB9_BOVIN (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Bos taurus OX=9913 GN=NDUFB9 PE=1 SV=2) HSP 1 Score: 63.2 bits (152), Expect = 2.5e-09 Identity = 32/97 (32.99%), Postives = 55/97 (56.70%), Query Frame = 0
BLAST of MELO3C023357.2.1 vs. Swiss-Prot
Match: sp|Q9CQJ8|NDUB9_MOUSE (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Mus musculus OX=10090 GN=Ndufb9 PE=1 SV=3) HSP 1 Score: 62.4 bits (150), Expect = 4.2e-09 Identity = 32/97 (32.99%), Postives = 55/97 (56.70%), Query Frame = 0
BLAST of MELO3C023357.2.1 vs. Swiss-Prot
Match: sp|Q0MQE8|NDUB9_PONAB (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Pongo abelii OX=9601 GN=NDUFB9 PE=2 SV=3) HSP 1 Score: 60.1 bits (144), Expect = 2.1e-08 Identity = 32/97 (32.99%), Postives = 55/97 (56.70%), Query Frame = 0
BLAST of MELO3C023357.2.1 vs. Swiss-Prot
Match: sp|Q0MQE9|NDUB9_GORGO (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Gorilla gorilla gorilla OX=9595 GN=NDUFB9 PE=2 SV=3) HSP 1 Score: 58.5 bits (140), Expect = 6.1e-08 Identity = 31/97 (31.96%), Postives = 55/97 (56.70%), Query Frame = 0
BLAST of MELO3C023357.2.1 vs. TrEMBL
Match: tr|A0A1S3CDS7|A0A1S3CDS7_CUCME (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Cucumis melo OX=3656 GN=LOC103499726 PE=3 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 4.9e-55 Identity = 107/115 (93.04%), Postives = 109/115 (94.78%), Query Frame = 0
BLAST of MELO3C023357.2.1 vs. TrEMBL
Match: tr|A0A0A0LLB9|A0A0A0LLB9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G252030 PE=3 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 2.1e-53 Identity = 104/115 (90.43%), Postives = 108/115 (93.91%), Query Frame = 0
BLAST of MELO3C023357.2.1 vs. TrEMBL
Match: tr|A0A2N9FNK3|A0A2N9FNK3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16724 PE=3 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 1.1e-49 Identity = 97/117 (82.91%), Postives = 108/117 (92.31%), Query Frame = 0
BLAST of MELO3C023357.2.1 vs. TrEMBL
Match: tr|A0A0D2RT13|A0A0D2RT13_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G248500 PE=3 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 6.9e-49 Identity = 94/117 (80.34%), Postives = 108/117 (92.31%), Query Frame = 0
BLAST of MELO3C023357.2.1 vs. TrEMBL
Match: tr|A0A061E0K2|A0A061E0K2_THECC (LYR family of Fe/S cluster biogenesis protein OS=Theobroma cacao OX=3641 GN=TCM_006779 PE=3 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.2e-48 Identity = 93/117 (79.49%), Postives = 107/117 (91.45%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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