MELO3C023197T2 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C023197T2
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	BTB/POZ domain-containing protein TNFAIP1 isoform 1
Location	chr11 : 113429 .. 121279 (+)
Sequence length	654

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTGTGTATCTCTATTCCTTCCTTCTCCGATTCTGTTACCGCTCCTTCCCTATCTCAAACTTATTTCAGTCTCAGTCGCCGGCGGCCTTCCAATTTCATCCATTTTCTTAATTTAAGCCTTCCCAACCGCCCACCATGTCTTTGCCGAGCTTCCAATTCTCAGCCTGGACCGTTCCCCAAACAGTCTGCTTCTGCTTCTTCTAAGAAAAGGAAGAAAAAGGATAAGGGAGATTCCAAGGTTTTTAATCCTAACAACTTCGAAGTTGTGGACGATTTTAGCTTCGATGACGCTGGACCTTCTAGCTCCACTTCCACTTCCACTTATTTGTCGTACCATCCTTCGACCTTGCCCAAACCGCCAGCTGGGTTTGTACTAGACGACCATGGAAAGGTCCTCATGGCTTCAAACAAGCGAATTGCTACCATGGTAACATTTTTTTCTCAGTTCCCTCATGGAGGATTTGTTTAAAATTGGTATCATTTTAGTGCTTCCCTGTTCACCTAACCTCTAGTGCCTTTTGATTTTCATGTATGAACGAGAAGTTCAGAATATGTTAAACCACCAATATTAATAGGATATAATAGGAGAAACAAGGGGAAGTTGGCACAGGATAGGTTAGTTAGAGATGTGGAGGAGAATTCGGAAAGAGGAAACTATAGTGGTGGGCCCAGCAGTTAGTTGGGATTGGAGAGAGATTTAGGCCGGGGAGATAGCAGAAACAATTGGGCAGAATTTTGGTGAAGTCAAGAGGACTATCACACTCCTTGAGAGACAGGAGGAGTAGTACACTGGTTCTGAATTGTCCTTGTTTTCTTGTTACATTGTTCTGTCTTTTATTTTGTTTTAAATTTGATTGCTGTATCTTTGCTTCAGTTAGGGAAGGATTGAGATTCTAGCCATGCTGTTTTTTGCCTTTTGTTTTCATCGAATATTGTAATTACGTTTGGATAGCAATAAAAGTAGAATCACCATACTGGTATTCTATCAATTTGGTATCAGAGCATTAGAATCTGGAAAAGCGTAAGAAGATGGCCAAGAAAATCGAAGAACTGTTGGATTTTGTGGAATAGGAAATTAGGGAAATGCGAACAGAGTTGAAGAAGCTATCCGCAATGGAGGAGAATATGTCCTCGATTTTGAAGAGTATTGAAAATATAAATGCGCAGATGGAGAAACAACAAACACAATAGCAAGCGATCCTGAAATACATCGAAGGAATCATTCGAGAGAAGGCTGTTACAACGGTTGAATTGGAAGGATCTCCGAGTAGGGGAATGGGAAGCGACTTTACATCTAAAGTGTTGACTGGGGAATCGAAGGGAGAACGAAAGAGGGAGGATGATAAGACATTTGATAGGAGCAAGTTTAAGAAGGTAGAAATGCCGATCTTCAATGGAACAGACCCTCACTCATGGTTGTTTCGAGCAACGTACNNNNNNNNNNNNNNNNNNNNGAATCGAAGGGAGAACGAAAGAGGGAGGATGATAAGACATTTGATAGGAGCAAGTTTAAGAAGGTAGAAATGCCGATCTTCAATGGAACAGACCCTCACTCATGGTTGTTTCGAGCAGACCGTTATTTCAAGATTCACAACTAACCGAATTAGAGAAGATGTCAGTGGCTATTATTAGCTTTGATGGTCCGGCCCTCGACTGGTATCGATCTCAGGATGAACGTGAATCTTTCAAGAGTTGAGATGATTTGAAGCAAAAGATGTTAACAAGGTTTCGAACGATCAGGGATGGTACGTTGGTAGGCAGTTTTTTGACGATTAAACAAGAGACCACGGTGAATGAGTATCGAAATAGATTTGACAAATATCTAGCTTTGGTAGCATTCTTACAAACGATGGTGCTTGAGGAGATTTTCATGAATGGGCTCAGCCCATGGTTGAAGACCGAAGTTGATGTTTTGGAACCATAAGGGTTAGCCCAAATGATGAAGCTGGCTCTTAAGATTGAGAACAAAGAGAGTGAGGAAGGAATGTGGGTTGATCAGTGTGTATGAGAGTAAGTTCTAGTACAACCTGCCTAAGGCAAAGGAAGGGACAAAGACCAAAGCAATGGCAGCCACGACTAGTGGAAATACTCCAATGAGAACAGTCACATTCAGAGGAGTCACGACGACGGATAACTGAAGAGAAGGACCTTCCAAGCGTTTGACTGATGCTGAATTTTAGGCTAGGAGGGAAAAGAGGTTGTGTTTTAAGTGTGAAGAGAAATATCATGCTGGCCATCGTTGTAAAGCTAAAGAACACAAGGAGTTAAGAATGCTGGTAGTACGGGAGAATGAAGAAGAGTTTGAGATCATTGAGGAAGTCGGAGGAGAAGAAGTGGTGGATGAGAATGTTATTGAGGTAGGAGTAGTGGAGAATTTGAACATAGAGCTATCCATTAATTCGGTGGTGGGGTTGACCAATCCTGAAACTATGAAGGTGAAGGGAAAGCTGAAGGATGAGGATGTGGTGGTGCTGATTGACTGTGGGGCTACCTACAATTTTATATCTGAAAAATTGGTAACCAACCTAAATCTACCGTTGAAAGCTACAACCAATTATGGGGTGATTCTGGGTTCAGGAGAAGCCATTAAAGGAAAAGAAATTTGTGGAAAAGTAGAGGTATTGCTAGACAATCGGAAAGTAGTGGACAGCTTCTTGCCACTTGAGTTGGGTGGTGTTGATGTCATACTTGGTATGCGGTGGTTGCATTCTCTTGAGTGACTGAAGTGGATTGGAAGCACTTAGTCATGTCCTTTCAGCATGGAGGAAGAAAGGTTATAATTCATGGGGATCCAAGCCTCACTAAGAAGGGAGTGAATTTGAGGAGCATGATGAAAACTTGGGAAGGGGAAGACCAAGGGTTTTTGGTGGAATGCCGAGCTATTGAAGGGAAGGTACCAGTGGCAACCTTTTATGAAGAGGAACTTGAAACAACTGTAGATAATTCCATCCCTCCATTGTTAAAGAAATTTTTAGATGTGTTTGAATGGCCAGAAACATTGCCACCCAAGAGAGGGATAAAGCATCACATTCATTTAAAACATGGTACTAACCCAGTCAATGTGAGGGCTTATCGCATAGCTATCAGAGTAGATGGAAAGATCAGTTGACGAGATGCTGGCTTCTGGAATAATTCGACCTAGCACCAGTCCATATTCAAGTCCTGTATTGTTAGTAAGGAAGAAGGATGGAAGCTGGAGGTTTTGTGTTGACTACCGAGCGCTTAATAATGTCACCATACCGGACTAATTTCCAATTCCTATCATTGAAGAGCTGTTTGATGAGTTGAATGGTGTAAAGATGTTTTCCAAGATTGACCTTAAAGCTGACTATCATTAAATACGGATGTACTAAGAGGATGTGGAAAAGATAGCCTTTCGCACTCATGAAAAGTTTTACACCATAAGTACCTCCATATTACACTGAGTGGGATTCGACAATAGGTTTGAGTTAATGATTAGAAAACTTCCTTTTCTCGATCTTGATTCCTAGTCATGCCTTTTGGTTTGACTAATGCACTTTCTACTTTCCAAGCCATATATGAGGAGGTTTGTACTGGTTTTCTTTGATGACATCCTAGTATATAGCAAGGGATTGGAAGAACATATACAACACTTGGAATTGGTGCTGGAAATTCTGAGGGCAAACGAGTTGTATGCTAATCTGCGCAAGTGCAGTTTTGCTAAGGAGAGAGTGAACTGTTTGGGGCATGTTATCTCTGAAAAAGGAGTGGAAGTGAATCCCGAGAAGATTAGGGCTATTAGAGAATGACTTGCTCCAACCAATGTACGTGAGGTAAGAGGATTTTTGGGTTTGATTGGATATTACCATAGATTTGTACAAAATTATGGCAGCATAGCAGGAACCCTTACTCAGCTGTTGAACAATGGGAGTTTCAAGTGGAATGAAGAAGCCGAAACTTCCTTTGAAAAGCTAAAGACAACTATGATGACCTTGCCCGTGTTAGCAATGCCAAATTTCAATTTGCCTTTTGAAATTGAAATGGATGCATCTGGCTATGGAGTGGGGGCTGTGTTAACTCAAGCTAAACGACCTATTGCCTATTTTAGTCGAACTTTAAGCATGAAGGACAAGGCCAAACCGGTATATGAGAGGGAATTGATAGCTGTAGTATTTACAGTGTAAAGATGGAGGCCATATCTTTTGGGCCGCAAGTTCATTGTGAAAACTGATCAGAGGTCACTGAAGTTCTTGTTGGAAGAGCGTGTCATCCAACCACAATACCAGAAATGGATTGCTAAATTGCTTGGATACTCTTTTGGAGTGGTTTATAAACCAGGGTTAGAAAACAAAGCTGCCGATGTTCACTATCTAGGGTGCCACCTACAATCCATTTGAACCAACTTTCAGCCCCTGCCCTAATTGATTTGGGCAAAATACAAGAAGAGGTAGAGAATGACCCGAAATTGAAGGAGATTAGAAGTATAGTTGAGCAAGATCCAGAGGAGTTTCCAAATTTCACAGTGAACTAAGGAGTCTTGCAATTCAAAGGGAGGTTAGTAATTTCCAAGAATTCTTCTTTTTTACTTATCGTTTTACATACCTATCATGATTCAATATTTGGTGGACATTTTGGATTCTCGAGAACCTATAAAAGAATTGCTGGAGAATTGTATTGGGATGGAATGAAGAAGGATATAAAGAAGTACTGTGAGGAGCCTTTGATTTGTCAAAAGAATAAAACACTAGCTTTGTCACCAGCTGGATTGCTAACTCCCTTAGAAATACCGGTTACCATATGGACCGATATATTTGTGGACTCATAGATGGATTACCTAAGTCTACTAGTTTTGAAGTTATATTTGTAGTGGTAGATAGGATGAGTAAATACGCACACTTCATGGCACTCAAACACCCCTATATGGCTAAATCTGTTGTTGAACTCTTTGAGAAGGAAATTGTTAGATTACATGGATACTCGAGATCTATTGTTTCTGATCGGGACAGGGTGTTTGTTAGTAACTTTCGGAATGAACTATTTAAGTTGGCAGGCACAGAACTCCATAGAAGCCCAGCATATCATCCGCAAAACAATGGTCAAACAGAGGTGGTTAATAGAGGGGTAGAAGCTTATCTCTGGTGCTTTTGTGGGGAAAGACCAAAGGAGTGGACAAATTGGCTGCATCGGGCTGAATATTGGCATAACACCACCTAACAGCTCAATTGGCATTTCACTGTTTCAGGCTGTTTATGGAAGGCTTCCACCTCCTTTGCTCTATTTTGGAGATATGGAAACATCCAATTCTACTCTAGATCAGCAGCTCAAAGATAGGGACATTGCTTTGGGGACTTTGAAGGAACACTTATGCATAGCCCAAGAGAAAATGAAGAAACAGGCAGATTTGAAGAGGAGAGCAGTTGAATTCCAGGTTGATGATATGGTTTTCCTAAAACTCATACCATATAGACAACTATCACTGTGAAGGAAGCGCAATTAAAAACCGTCCCCAAAATATTTTGGTCCTTACAGAGTGTTAGAAAAGATAGGTCCAGTAGCTTATAAGCTGGAATTGCCTAGTACAACAACTTTTCATCCAGTTTTCCACGTTTCCCATCTAAAGAGGGCATTAGGGGATCATACTCAAGTACAACAGCTTGATTCTTACCTAACAGAAAACCATGAATGGATGACGCAATCGGATGAAGTATATGGGTACAAAAAGAATTCTAACACAAAGGACTGGGAGGTGTTGATAAGTTGGAAAGGGTTACCACCCCATGAGGCCACGTGGGAAGACTGTAATGACTTCAAACATCAGTTTTCTGACTTCCACCTTGAGGACAAGGTGGATTTGGAGGAGGAGAGTAATGTTAAACCACCAATATTATTCACATTTATAATAGGAGAAATAATTTAGGAGAAATAAGGGGAAGTTGGCACAGGATATGTTAGTTAGAGATGTGGAGGAGACTTCGGAAAGAGGAAACTATAGTGGTGGGCCTAACAGTTAGTTGGGATTGGAGAGGGATTTAGGCCGGGGAGATAGCAGAAACAGTTGGGCAGAATTTTGATGAAGTCAAGAGGACTATCTCACTCCTTGAGAGAGAGGAGGAGTAGTACACTGGTTCTGAATTTTCCTTGTTTTTTTGTTACATTGTTCTGTCTTTTATTTTGTTTTAAATTTGATTACTGTATCTTTGCGTCAGTTAGGGAAGGATTGAGATCCTAGTAGTGCCGTCTTTTTGCTTTTTGTTTTCATCAAATATTGTAATTACGTTTGGATATCAATAAAAGTAGAATCACCGTATTGGTGTTCTATCAGAATACATCTGTAATTTATAGGCACTCAGTTATTGGATCTAAATTAATCAAACTACATCTGTAATTTATAGGCACTCAGTTATTGAATCTAAACTAATCAAACTAAAAGTATGCAGTTAATAAATCGAATTAATTTTTCTTATTTATGTTCATCCCATTTACCCCTTTACAGCTGGTTTTCTCATTATTTATGAATTGTTTTATGTATTTGGGTTTGCTAATCTTTGATCAACTGTACTGCCACAAGTGTATGACTGGTTTTTTCATGTATTCAGTTTATTGCTCTAGCTTTCTTTCATAGATATAATGAAAAGATACTGATTCTCGGAAAAATAGAAGAGACGGTCACCAGTGATTTAATACAGTATATAATCTCCAGTTGGAGTACCGTTTCCTGCTTCTTTTCTTGTAATTATACTATCAGATCAACCTCAATTGGGGAATCGCCTTCCCCTAGCCTTAGGAGTGATTTATTATTATTATGATTATTTTACGAATCCTGCCTGTCCTTATCAAAGAAAGGAAATTATATCATTATTCGTTACTAAATCCTTTACAATTTTTATCATTGTTGTTCTTGTATTTGTGACTTAATTAAATTCCTTACTTTTTTCTTTTTCTTTTTGCTTTTGCATCTTCAAATCTTTTAATTTGACAGGTCGATCCTTTAAATAATTTGCCTCTGGAATGCGTTATAAGAAGAATTTTTAGAAGTTCAAAAGGGGATGATTGCATGCTTCTTTGCCCCGTGGACACGTGAGTGTTGTTTGTTGCTACCAGATCATTATGCTAGAGCCTCGACACTTTGAAAGTTTGACCTTTTTTTTATATTATTTATCTCAAAATTGCTGCAGGCCTGTTCAAATACTAAAGAGCAAGAATATTGATGGATGGTCAGCTGTATGCTTTCTTTTCATATGGTTAACTTCCTCGCTAGTTTTAGTTTGTTCATGAACTTGAGTGCGGATGGTTCTACAATATTAATTCACATCATGAAACTTTTATATTTCGCATTTCTGTATGCTGTATAAGTAAGGAGTTCATGCATGTATTGTTCATTTGTTTGTCCCTTCTACCATTTTACCATTTTGTTCTATTTTTTCTAAAAAGGAAACAAGTCTTTTTATTCATTCAAATGTAATACAAAAGAAACTAATGTTCTAAGTACATGAGGGTTATACAAAAAGTGTAAAGTATAAAGCATAACTAGGATCAGTAGGCGCATCCAAACATCTCAACTAGGTTGACATCTCCTTAGTGCCCTCATCATATCCTTAAAAATAACATCAAAAATCAATCGAGATTTATAAATTTGGCCATTACGGATAAGACAAAAAGACTGTTGATCACTAGTCTTACAAAGGATTTAACAAAAAGCATACAGAAGGCTGGAGACAGAAGTACAATAAGAGATTTAACTCAAAACAAAATTAAGGTGGGAAGATAAAAAGCTCTCCAATATGAGTAGATTTCTTGAATGCTTTAGCTTTCAAAAGGCTTGGAGAAGGAACACCACGAGGAGGCATTCTTACAGGTCAAAAAGACTATTGATCACGTATTTTAG

mRNA sequence

ATGGCGTTGTGTATCTCTATTCCTTCCTTCTCCGATTCTGTTACCGCTCCTTCCCTATCTCAAACTTATTTCAGTCTCAGTCGCCGGCGGCCTTCCAATTTCATCCATTTTCTTAATTTAAGCCTTCCCAACCGCCCACCATGTCTTTGCCGAGCTTCCAATTCTCAGCCTGGACCGTTCCCCAAACAGTCTGCTTCTGCTTCTTCTAAGAAAAGGAAGAAAAAGGATAAGGGAGATTCCAAGGTTTTTAATCCTAACAACTTCGAAGTTGTGGACGATTTTAGCTTCGATGACGCTGGACCTTCTAGCTCCACTTCCACTTCCACTTATTTGTCGTACCATCCTTCGACCTTGCCCAAACCGCCAGCTGGGTTTGTACTAGACGACCATGGAAAGGTCCTCATGGCTTCAAACAAGCGAATTGCTACCATGGTCGATCCTTTAAATAATTTGCCTCTGGAATGCGTTATAAGAAGAATTTTTAGAAGTTCAAAAGGGGATGATTGCATGCTTCTTTGCCCCGTGGACACGCCTGTTCAAATACTAAAGAGCAAGAATATTGATGGATGGTCAGCTCTTTCAAAAGGCTTGGAGAAGGAACACCACGAGGAGGCATTCTTACAGGTCAAAAAGACTATTGATCACGTATTTTAG

Coding sequence (CDS)

ATGGCGTTGTGTATCTCTATTCCTTCCTTCTCCGATTCTGTTACCGCTCCTTCCCTATCTCAAACTTATTTCAGTCTCAGTCGCCGGCGGCCTTCCAATTTCATCCATTTTCTTAATTTAAGCCTTCCCAACCGCCCACCATGTCTTTGCCGAGCTTCCAATTCTCAGCCTGGACCGTTCCCCAAACAGTCTGCTTCTGCTTCTTCTAAGAAAAGGAAGAAAAAGGATAAGGGAGATTCCAAGGTTTTTAATCCTAACAACTTCGAAGTTGTGGACGATTTTAGCTTCGATGACGCTGGACCTTCTAGCTCCACTTCCACTTCCACTTATTTGTCGTACCATCCTTCGACCTTGCCCAAACCGCCAGCTGGGTTTGTACTAGACGACCATGGAAAGGTCCTCATGGCTTCAAACAAGCGAATTGCTACCATGGTCGATCCTTTAAATAATTTGCCTCTGGAATGCGTTATAAGAAGAATTTTTAGAAGTTCAAAAGGGGATGATTGCATGCTTCTTTGCCCCGTGGACACGCCTGTTCAAATACTAAAGAGCAAGAATATTGATGGATGGTCAGCTCTTTCAAAAGGCTTGGAGAAGGAACACCACGAGGAGGCATTCTTACAGGTCAAAAAGACTATTGATCACGTATTTTAG

Protein sequence

MALCISIPSFSDSVTAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPCLCRASNSQPGPFPKQSASASSKKRKKKDKGDSKVFNPNNFEVVDDFSFDDAGPSSSTSTSTYLSYHPSTLPKPPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQILKSKNIDGWSALSKGLEKEHHEEAFLQVKKTIDHVF*

Homology

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BLAST of MELO3C023197T2 vs. TrEMBL
Match: A0A0A0LQF4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338850 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 1.4e-112
Identity = 202/215 (93.95%), Postives = 206/215 (95.81%), Query Frame = 1


Query: 1   MALCISIPSFSDSVTAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPCLCRASNSQPGPF 60
           MALCISIPSFSDS TAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPP LCRASNSQPGPF
Sbjct: 1   MALCISIPSFSDSATAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPGPF 60

Query: 61  PKQSASASSKKRKKKDKGDSKVFNPNNFEVVDDFSFDDAGPSSSTSTSTYLSYHPSTLPK 120
           PKQSASASSKKRKKKDKGDSKVFNP + EVVDDFSFDDAGPSSSTS STY SYHPSTLPK
Sbjct: 61  PKQSASASSKKRKKKDKGDSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSSYHPSTLPK 120

Query: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180
           PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ
Sbjct: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180

Query: 181 ILKSKNIDGWSALSKGLEKEHHEEAFLQVKKTIDH 216
           ILKSKNIDGWSALSK LEKEHHE+ FL+VKK +DH
Sbjct: 181 ILKSKNIDGWSALSKALEKEHHEKTFLRVKKMVDH 215

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BLAST of MELO3C023197T2 vs. TrEMBL
Match: M5WG33_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008276mg PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.0e-46
Identity = 104/202 (51.49%), Postives = 133/202 (65.84%), Query Frame = 1


Query: 9   SFSDSVTAPSLSQTYFSLSRRRPSNFIHF-----LNLSLPNRPPC-------LCRASNSQ 68
           +FS S T  + S  +   +   P    HF     L++S P            +C A+ SQ
Sbjct: 2   AFSVSTTPSTTSSLHLKQAHYFPLFTFHFNQLFPLSVSFPTPSSTPTRLHISVCAAAKSQ 61

Query: 69  PGPFPKQSASASSKKRKKKDKG----DSKVFNPNNFEVVDDFSFDDAGPSSSTSTSTYLS 128
            GP  K+S S ++  +KKK KG    DS+  + ++ E+VD+      G S S S+S  L 
Sbjct: 62  TGPVKKRSPSGTNNNKKKKRKGGGGGDSEDLSLSDVEIVDNLGAGGVGSSGSGSSSRSLG 121

Query: 129 YHPSTLPKPPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLL 188
           +HP+ LPKPPAGFV+DDHGKVLMAS+KRIA++VDP NN PLECVIRR+FRSS+GD+CMLL
Sbjct: 122 FHPTPLPKPPAGFVVDDHGKVLMASSKRIASIVDPTNNFPLECVIRRVFRSSRGDECMLL 181

Query: 189 CPVDTPVQILKSKNIDGWSALS 195
           CPVDTPVQILKS NIDGWSA+S
Sbjct: 182 CPVDTPVQILKSTNIDGWSAVS 203

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BLAST of MELO3C023197T2 vs. TrEMBL
Match: A0A061DJE6_THECC (BTB/POZ domain-containing protein TNFAIP1 isoform 1 OS=Theobroma cacao GN=TCM_001583 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.4e-42
Identity = 111/202 (54.95%), Postives = 135/202 (66.83%), Query Frame = 1


Query: 9   SFSDSVTAPSLSQTY--------FSLSRRRPSNFIHFLNLSLPNRPPCLCRASNSQPG-P 68
           S S + T PS S +Y        F +S R  SN     +  LP     LC A+ SQ G P
Sbjct: 4   SISLTSTPPSTSPSYHHKNPFPSFPVSIRISSN--SSASALLP-----LCFAAKSQTGGP 63

Query: 69  FPKQSAS-ASSKKRKKKDKGDS---KVFNPNNFEVVDDFSFDDAGPSSSTSTSTY---LS 128
             K+S+S A +KKR+K   GD    K  +  + E+V++   DD G SSS+S++T    L+
Sbjct: 64  VKKRSSSVAGNKKRRKGRSGDDDNLKELSLRDVEIVEENVDDDEGSSSSSSSTTATHALA 123

Query: 129 YHPSTLPKPPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLL 188
           YHP  LPKPPAGFV+DD G+VLMASNKRIATMVD  NN PLECVIRR+F SS+GD+CMLL
Sbjct: 124 YHPPPLPKPPAGFVVDDTGRVLMASNKRIATMVDSANNNPLECVIRRVFESSRGDECMLL 183

Query: 189 CPVDTPVQILKSKNIDGWSALS 195
           CPVDTPVQILKS NIDGWSA+S
Sbjct: 184 CPVDTPVQILKSTNIDGWSAVS 198

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BLAST of MELO3C023197T2 vs. TrEMBL
Match: A0A061DKW6_THECC (BTB/POZ domain-containing protein TNFAIP1 isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_001583 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 7.6e-42
Identity = 97/154 (62.99%), Postives = 117/154 (75.97%), Query Frame = 1


Query: 49  LCRASNSQPG-PFPKQSAS-ASSKKRKKKDKGDS---KVFNPNNFEVVDDFSFDDAGPSS 108
           LC A+ SQ G P  K+S+S A +KKR+K   GD    K  +  + E+V++   DD G SS
Sbjct: 38  LCFAAKSQTGGPVKKRSSSVAGNKKRRKGRSGDDDNLKELSLRDVEIVEENVDDDEGSSS 97

Query: 109 STSTSTY---LSYHPSTLPKPPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRI 168
           S+S++T    L+YHP  LPKPPAGFV+DD G+VLMASNKRIATMVD  NN PLECVIRR+
Sbjct: 98  SSSSTTATHALAYHPPPLPKPPAGFVVDDTGRVLMASNKRIATMVDSANNNPLECVIRRV 157

Query: 169 FRSSKGDDCMLLCPVDTPVQILKSKNIDGWSALS 195
           F SS+GD+CMLLCPVDTPVQILKS NIDGWSA+S
Sbjct: 158 FESSRGDECMLLCPVDTPVQILKSTNIDGWSAVS 191

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BLAST of MELO3C023197T2 vs. TrEMBL
Match: A0A059AK57_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I00111 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.2e-40
Identity = 86/146 (58.90%), Postives = 104/146 (71.23%), Query Frame = 1


Query: 49  LCRASNSQPGPFPKQSASASSKKRKKKDKGDSKVFNPNNFEVVDDFSFDDA-GPSSSTST 108
           LCRAS SQ  P  K+  S + K++KK  K D       + E+VDDF   +  G  S    
Sbjct: 52  LCRASKSQGNPVRKRQPSGAGKRKKKPAKEDGAA---RDVEIVDDFVIGEGEGEGSGGLG 111

Query: 109 STYLSYHPSTLPKPPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGD 168
           ++   YHP+ LPKPPAGFV+DD G+V+MAS+KR+ T+VDP NN PLECVIRRIFRSS GD
Sbjct: 112 ASSAGYHPTPLPKPPAGFVVDDQGRVVMASHKRLVTIVDPTNNFPLECVIRRIFRSSSGD 171

Query: 169 DCMLLCPVDTPVQILKSKNIDGWSAL 194
           +CMLLCP DTPVQILKS NIDGWSA+
Sbjct: 172 ECMLLCPADTPVQILKSTNIDGWSAV 194

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BLAST of MELO3C023197T2 vs. TAIR10
Match: AT4G33480.1 (AT4G33480.1 unknown protein)

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-39
Identity = 97/199 (48.74%), Postives = 124/199 (62.31%), Query Frame = 1


Query: 9   SFSDSVTAPSLSQTYFSLSRRR----PSNFIHFLNLSLPNRPPCL----CRASNSQPGPF 68
           +FS S+T+PS + T    S  +     S+F   L++S P     L      A N Q G  
Sbjct: 2   AFSYSLTSPSPNSTLSYSSTHQFLNPSSSFPVSLSVSSPKNTRHLRLLITSALNPQTGQP 61

Query: 69  PKQSA-----SASSKKRKKKDKGDSKVFNPNNFEVVDDFSFDDAGPSSSTSTSTYLSYHP 128
            K+++     S+++KKRKKK K    V +    +  D F  DD    SS+S+S      P
Sbjct: 62  TKKASTGSDKSSTNKKRKKKGKIAKPVEDWELRDSEDAFEEDDDADYSSSSSSLATFNSP 121

Query: 129 STLPKPPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPV 188
            T+PKPPAGFV+++ G+VLMAS KRI T++DP NN PL+CVIRR+F SSKG+DCMLLCPV
Sbjct: 122 PTIPKPPAGFVINETGRVLMASKKRITTVIDPTNNSPLDCVIRRVFTSSKGEDCMLLCPV 181

Query: 189 DTPVQILKSKNIDGWSALS 195
           DTPVQILKS NIDGWSA+S
Sbjct: 182 DTPVQILKSTNIDGWSAVS 200

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BLAST of MELO3C023197T2 vs. NCBI nr
Match: gi|700207122|gb|KGN62241.1| (hypothetical protein Csa_2G338850 [Cucumis sativus])

HSP 1 Score: 413.7 bits (1062), Expect = 2.0e-112
Identity = 202/215 (93.95%), Postives = 206/215 (95.81%), Query Frame = 1


Query: 1   MALCISIPSFSDSVTAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPCLCRASNSQPGPF 60
           MALCISIPSFSDS TAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPP LCRASNSQPGPF
Sbjct: 1   MALCISIPSFSDSATAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPGPF 60

Query: 61  PKQSASASSKKRKKKDKGDSKVFNPNNFEVVDDFSFDDAGPSSSTSTSTYLSYHPSTLPK 120
           PKQSASASSKKRKKKDKGDSKVFNP + EVVDDFSFDDAGPSSSTS STY SYHPSTLPK
Sbjct: 61  PKQSASASSKKRKKKDKGDSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSSYHPSTLPK 120

Query: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180
           PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ
Sbjct: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180

Query: 181 ILKSKNIDGWSALSKGLEKEHHEEAFLQVKKTIDH 216
           ILKSKNIDGWSALSK LEKEHHE+ FL+VKK +DH
Sbjct: 181 ILKSKNIDGWSALSKALEKEHHEKTFLRVKKMVDH 215

[Close]

BLAST of MELO3C023197T2 vs. NCBI nr
Match: gi|659121815|ref|XP_008460828.1| (PREDICTED: uncharacterized protein LOC103499586 [Cucumis melo])

HSP 1 Score: 396.0 bits (1016), Expect = 4.3e-107
Identity = 193/194 (99.48%), Postives = 194/194 (100.00%), Query Frame = 1


Query: 1   MALCISIPSFSDSVTAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPCLCRASNSQPGPF 60
           MALCISIPSFSDSVTAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPCLCRASNSQPGPF
Sbjct: 1   MALCISIPSFSDSVTAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPCLCRASNSQPGPF 60

Query: 61  PKQSASASSKKRKKKDKGDSKVFNPNNFEVVDDFSFDDAGPSSSTSTSTYLSYHPSTLPK 120
           PKQSASASSKKRKKKDKGDSKVFNPNNFEVVDDFSFDDAGPSSSTSTSTYLSYHPSTLPK
Sbjct: 61  PKQSASASSKKRKKKDKGDSKVFNPNNFEVVDDFSFDDAGPSSSTSTSTYLSYHPSTLPK 120

Query: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180
           PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ
Sbjct: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180

Query: 181 ILKSKNIDGWSALS 195
           ILKSKNIDGWSA+S
Sbjct: 181 ILKSKNIDGWSAVS 194

[Close]

BLAST of MELO3C023197T2 vs. NCBI nr
Match: gi|778670353|ref|XP_011649451.1| (PREDICTED: uncharacterized protein LOC101207357 isoform X1 [Cucumis sativus])

HSP 1 Score: 379.0 bits (972), Expect = 5.5e-102
Identity = 186/194 (95.88%), Postives = 188/194 (96.91%), Query Frame = 1


Query: 1   MALCISIPSFSDSVTAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPCLCRASNSQPGPF 60
           MALCISIPSFSDS TAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPP LCRASNSQPGPF
Sbjct: 1   MALCISIPSFSDSATAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPGPF 60

Query: 61  PKQSASASSKKRKKKDKGDSKVFNPNNFEVVDDFSFDDAGPSSSTSTSTYLSYHPSTLPK 120
           PKQSASASSKKRKKKDKGDSKVFNP + EVVDDFSFDDAGPSSSTS STY SYHPSTLPK
Sbjct: 61  PKQSASASSKKRKKKDKGDSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSSYHPSTLPK 120

Query: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180
           PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ
Sbjct: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180

Query: 181 ILKSKNIDGWSALS 195
           ILKSKNIDGWSA+S
Sbjct: 181 ILKSKNIDGWSAVS 194

[Close]

BLAST of MELO3C023197T2 vs. NCBI nr
Match: gi|778670355|ref|XP_011649452.1| (PREDICTED: uncharacterized protein LOC101207357 isoform X2 [Cucumis sativus])

HSP 1 Score: 379.0 bits (972), Expect = 5.5e-102
Identity = 186/194 (95.88%), Postives = 188/194 (96.91%), Query Frame = 1


Query: 1   MALCISIPSFSDSVTAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPCLCRASNSQPGPF 60
           MALCISIPSFSDS TAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPP LCRASNSQPGPF
Sbjct: 1   MALCISIPSFSDSATAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPGPF 60

Query: 61  PKQSASASSKKRKKKDKGDSKVFNPNNFEVVDDFSFDDAGPSSSTSTSTYLSYHPSTLPK 120
           PKQSASASSKKRKKKDKGDSKVFNP + EVVDDFSFDDAGPSSSTS STY SYHPSTLPK
Sbjct: 61  PKQSASASSKKRKKKDKGDSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSSYHPSTLPK 120

Query: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180
           PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ
Sbjct: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180

Query: 181 ILKSKNIDGWSALS 195
           ILKSKNIDGWSA+S
Sbjct: 181 ILKSKNIDGWSAVS 194

[Close]

BLAST of MELO3C023197T2 vs. NCBI nr
Match: gi|595863297|ref|XP_007211558.1| (hypothetical protein PRUPE_ppa008276mg [Prunus persica])

HSP 1 Score: 193.4 bits (490), Expect = 4.3e-46
Identity = 104/202 (51.49%), Postives = 133/202 (65.84%), Query Frame = 1


Query: 9   SFSDSVTAPSLSQTYFSLSRRRPSNFIHF-----LNLSLPNRPPC-------LCRASNSQ 68
           +FS S T  + S  +   +   P    HF     L++S P            +C A+ SQ
Sbjct: 2   AFSVSTTPSTTSSLHLKQAHYFPLFTFHFNQLFPLSVSFPTPSSTPTRLHISVCAAAKSQ 61

Query: 69  PGPFPKQSASASSKKRKKKDKG----DSKVFNPNNFEVVDDFSFDDAGPSSSTSTSTYLS 128
            GP  K+S S ++  +KKK KG    DS+  + ++ E+VD+      G S S S+S  L 
Sbjct: 62  TGPVKKRSPSGTNNNKKKKRKGGGGGDSEDLSLSDVEIVDNLGAGGVGSSGSGSSSRSLG 121

Query: 129 YHPSTLPKPPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLL 188
           +HP+ LPKPPAGFV+DDHGKVLMAS+KRIA++VDP NN PLECVIRR+FRSS+GD+CMLL
Sbjct: 122 FHPTPLPKPPAGFVVDDHGKVLMASSKRIASIVDPTNNFPLECVIRRVFRSSRGDECMLL 181

Query: 189 CPVDTPVQILKSKNIDGWSALS 195
           CPVDTPVQILKS NIDGWSA+S
Sbjct: 182 CPVDTPVQILKSTNIDGWSAVS 203

The following BLAST results are available for this feature:

BLAST of MELO3C023197T2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQF4_CUCSA	1.4e-112	93.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338850 PE=4 SV=1	[more]
M5WG33_PRUPE	3.0e-46	51.49	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008276mg PE=4 SV=1	[more]
A0A061DJE6_THECC	3.4e-42	54.95	BTB/POZ domain-containing protein TNFAIP1 isoform 1 OS=Theobroma cacao GN=TCM_00...	[more]
A0A061DKW6_THECC	7.6e-42	62.99	BTB/POZ domain-containing protein TNFAIP1 isoform 2 (Fragment) OS=Theobroma caca...	[more]
A0A059AK57_EUCGR	4.2e-40	58.90	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I00111 PE=4 SV=1	[more]

BLAST of MELO3C023197T2 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33480.1	1.1e-39	48.74	unknown protein	[more]

BLAST of MELO3C023197T2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700207122\|gb\|KGN62241.1\|	2.0e-112	93.95	hypothetical protein Csa_2G338850 [Cucumis sativus]	[more]
gi\|659121815\|ref\|XP_008460828.1\|	4.3e-107	99.48	PREDICTED: uncharacterized protein LOC103499586 [Cucumis melo]	[more]
gi\|778670353\|ref\|XP_011649451.1\|	5.5e-102	95.88	PREDICTED: uncharacterized protein LOC101207357 isoform X1 [Cucumis sativus]	[more]
gi\|778670355\|ref\|XP_011649452.1\|	5.5e-102	95.88	PREDICTED: uncharacterized protein LOC101207357 isoform X2 [Cucumis sativus]	[more]
gi\|595863297\|ref\|XP_007211558.1\|	4.3e-46	51.49	hypothetical protein PRUPE_ppa008276mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010207	photosystem II assembly
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C023197	MELO3C023197	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C023197T2	MELO3C023197T2-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C023197T2.cds1	MELO3C023197T2.cds1	CDS
MELO3C023197T2.cds2	MELO3C023197T2.cds2	CDS
MELO3C023197T2.cds3	MELO3C023197T2.cds3	CDS
MELO3C023197T2.cds4	MELO3C023197T2.cds4	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36061	FAMILY NOT NAMED	coord: 51..194 score: 4.5
None	No IPR available	PANTHER	PTHR36061:SF2	SUBFAMILY NOT NAMED	coord: 51..194 score: 4.5