MELO3C023193T3 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C023193T3
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionTrafficking protein particle complex subunit 2
Locationchr11 : 74838 .. 79320 (+)
Sequence length785
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGACCTTCCGAATTGCTACTCAGAATGGCGAACACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAGTATTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTGCTTTCCATTTTGTTTTTCATGTTTAGGCTGAATGTTTCCTTCACAAGATCGCCAATAAAAGGTGATATCGTTAATTACTTTAGTTTTGACTGTCATTAGTCGCTCATCTTTTTGGCATGACATGAAAGAGAGAGGATTCCGCCCAGCTGCATCAATTTATATTGCATGCGTCCCTTGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTGAGTTCGCATTCCTTCTAGTTCTTTATTAGATCATCGAGACGCCTCCTCTATCTTATTTTTCTTTTTGTTCTTTTCCCCTTTAAATTTCGCCTTAACTACCTTTTTGGATTTTATGCAGGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTCTATGTAACCGCTGGTCATATCCTTTAATGTCGAGAGGGTTTGTCAGGCACACTATGTTGGAAATTGTGTCAAATTTCATTAATGCACGCACCCGTAAAACTCAACTCTAAATTAATGAAAGTTTTATCTTTGAATCTTTTGCATCTGTACCCCACCCCCCACCATTGCATTACTGGTATATTGACTTATGGAATCTGCAATCAAACCTTTTCATTATACGAGATACATGGTTTCCTACGATTCAGGCATTCTAAATACATTTGAGAGATTAATTTCAGTTCGTAGTTCATATTGTTCCCTTCTTTTACCAATATTCTGATTTTCCTTTGACTATTCACTACATACGCGATTGATGTTACTTCACGACTCTCGCAATGACGATGGAATCAAGAGTTTTTTTCAAGAGGTTCATGAGCTTTACATAAAGGTAAGTTGGACATTTTTTCTTCTGTATCACTATTGTTATTGCTTGTGGTGCTTAGTGTGTGTATGTGTGTGTGTTTTTCAACAACACGCGGGGGAGTGTTGTGCTTAATTTTTCTATGTTATGTATATTATATTGGTTGATTGAAGTATATCTTAGTTGATTAAGTTACTTTTCCAAAGCTGGGAGGCATACTTTGATTCGGTCAGACATGAGTGGCATTCCCTTTTACTTATTTTCTTCGTTTAGAACCTGGTGGACATTGAAAAACTGATGTGTAACTTCCTTTGGGAAGAGGTGGAAGAAGGAAACAGACTGCAACGAGTTAGATGGGAGATCGATGAACTGGGGGAATTAAAATTTGTTATGAAAGCCCTATTAGCTAAATGGCTTTCGCATTTTGCTCTTGATTCTATTACCTTTTTGCACAAGGATATTGCTTGCAAGTTTGGGCCTCATCCCTTTGAGTGGTTGTCAGGTGGGATTAAAGGCATCGACTAGAATTTGTGGAAGGATATTTCTAACAAGCTGCCCTCTTTCTACCATTCTGTCTGTTGTGTGGTAGGGTAGAGGAGGGTGAGGAAGTATGATTCTGGGGTGATCAATGCTTGGGGATAGATAAACCTCTCTGCTTCCATTTCCTCATCTTTATCATTTATCCCTCTCTAGAAATCATTTTGTTTCTGGGTTTTTTGTTTGGTTGGGGAGCTTGGTTTCCTTTTTCTTCGGGTTTAACCGCTCTTTGACTGATAGGGAAGCTACAAATGTCATCTCTTTGCTGTCGTTGTTGGGGGAGTTTAACTTTAGATATGGGAGAAAGGATCTACTTGTCTGGAATCTCAATCCTCTTGAGGGATTCTTTTGTAATTCCAATTTTTTTTTTGTCTGGTGAATCCTTCTCCTTCCCATTAGTATGTCTTTTCAGCCCTTCAGAGGAATAAGATTCTTGAGAAGGATAGATTCTTTACCTGGCAAATTTTACATAAATGTGTGAACATTTTGGATAGGCTCTCGAGGAGGAAGAGGTTATTGTTGTTAGGGGGCCCTTTTTTGTATTATGTTGGAAGGTCGGTGAAAACTTGGATCACATACTTTGGAGAGTTGCACACTATGTCTAGAATTTGTTCTTCCAGAAATTTGGTCTTGTGGTTGCCCATCAAAAGGACTTCAGAGTTACGATCGGGTAGTTCCCTTCCTCCTCCATCCTCCTTTTGTGAGAAAGGTCATATGCCTTGTATTTTTTTTTTTTTTAATTCTATCTCAATGAAAGTGCTTGCAGTTGCATTATCTGAAAAAGAAGGAAAAAAAAAGGTTCTTGCTTAATGGAGTTATATATATATATATATGTAAAAACAGAACAGTTGTAAATAAGCAAATTGTATCACTCCAATATGAGCATAGATAAAAGGCATTAGTTATCATCTCAAAGGTCGATGATTTGATCTCACTTACAGTTGCTGAACTAAAAAAAAAAAGAAAAAGAAAAAAAGAAGAAGAAATAATAATAATAATAATAAATAAATAAATAAATTGCATTCCTCGAGTCCTGATTGTGTATATTCATCAAAAAGCGTAACGGGTTGATTTGTTACAAGATCAAGTTGTCATTGTGAATGAAACATGAGATGGTGGGTGGTGAGGTTGGTTTATCTTTTTGAGAGCCCTTGTTGTTTGGCCATGTCAGGTGCTCAGATTTAAGGCTCCTTTAGATCCCTCCTAAGTGTTATTATTGTTTCCGTAGCACTGGAATGTGACCTATATCTTCAAGGATAGTCCTTCAGACCTATTTCTTCTAGGAAAATTTAATTGGTTTTTGGAAATAAAATTGATAGATTGACTTGAAATCATGTGCTAGAGTTACAAAGTATTGTTATTATCTAGTAGTGGTACGTTTTTAATAAGTTATATTAATAACGATTGAGTTGTTGAATGAACTATTTGTAGAAAAACTATGTTTATGACATACCAAGATTGTTTCCCTCCGAAGTGTCCTTTAGTGTTATCCTTTGAATTGATTGCACCACATAGACAAAATGGCCTAGAATAAGCAATAACGATTTCATGGCTAAAAAAAAAAACGTAGCTCACCTAACATCTAACCCTGGGGTTCTAATCCCCCGAGTCCCTCTTGTACTCGAGTGTTAAATATTCATGTTAACTTGTCTCTCATCCTCTCCTGATTTTTATATCTATATTTTCTCTCTCTATTGGAGACTTTTTTCTTCCATTAGCCAATAAGACTTTTCCCGTCTAAGAAACCAATAAGCGTTTCTGTTTGAATAGAAGAAAAGTGGTGTAAACGGGAGTGTAATTCTTGTTCTGCTTACTTGTAACGGCTATCATAATAGTAGGTTCATGAGGGCCTCCCATCCCCAGCATTGTTTACGTTCTATTGGCAAAATTTCCCAATCAATGTAGGCTATTCTGCAACTGAAATTTAACTTTTCTTGATGATTCTAGTTTGATTTTACCCATTTGAAAACTTCTGTTACTACTCTCCTTGGTTGATTACTCTTTTGGATTTTAGCGCAGTTAGTATTCCTATCAAATTTTGCAAGTTTTCGTCAAGCTAGGATTTCAAGACCTTAAATTTCATTTTTCATGTTTGCCGTAACAGTAGATAAATAAAAGGTTTGGTACTTTGGTTTGATCACCTTCAGTCTACTCTCTAATTTTTGGAGCTTCATGGAAGATGCAACAGTGTTTTTGCAAAGATTTTGACTATAGTAAATAATTTTGAGGACTACTTGTCATATAATTTCATAATATTGTCCATTCCATTTGATAGGCAACGACAACAAGGGGCCTAAGCTCTGTATATAATGTTTCATAGTTAAGTATTTCCATGGATGTGATTTTTCGGCTTTGAATCAAACTTACTTGATACTCATCTATCGGAAGAATTATAAGTTAATCAATTCAAGACAATTAAACGCTGGGTAAGTCTTGGTTATTTGGTGGGCTTTGGTCTTCTATGTGTTCCCCCTGTTTTCAATGAATGGCTGTGGCATGAACCTTGTTGTGTTCCAGATATTTTTTCTGCATTGTTGCCCTGCACATGACTGAAATTGGCTTTGTGAATTTGCAGACTATACTCAATCCTCTCTACTTGCCTGGATCCCGCATCACGTCTTCACATTTTGACACAAAAGTTCGCGCACTCGCAAGGAAGTATCTCTAGTCATCACCTTCATTGCAGACCAAATGTGCTTTCATGACAATGCTTCGAAGTTTATAGTAGCCCTAAGTTTTCTTTTAACTGTACAACATTTTAATCTTTGCCATTTGTGGTCCTGACATCAATCAATTCAGTAGTTAAATAATTCTCAATGTGTAATATTGACTTTGGAATGGCTTGGTTACGAGTTGGAATTGCACTTCACAGTAATGCGTTTTGCCCTTTTTACTCATCTTTTGTTGTAGAGAGTACTATCATTATTTGTTGTTATATTCTATAAGGCAGTGGATATGGGATATTAAAGTTGTGTAAAATATGCATTTTTTGAAAAGCTCAATAGACGGTCCATTCCTT

mRNA sequence

AGAGACCTTCCGAATTGCTACTCAGAATGGCGAACACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCCCAGCTGCATCAATTTATATTGCATGCGTCCCTTGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTCTATGTAACCGCTGGTCATACGCGATTGATGTTACTTCACGACTCTCGCAATGACGATGGAATCAAGAGTTTTTTTCAAGAGGTTCATGAGCTTTACATAAAGACTATACTCAATCCTCTCTACTTGCCTGGATCCCGCATCACGTCTTCACATTTTGACACAAAAGTTCGCGCACTCGCAAGGAAGTATCTCTAGTCATCACCTTCATTGCAGACCAAATGTGCTTTCATGACAATGCTTCGAAGTTTATAGTAGCCCTAAGTTTTCTTTTAACTGTACAACATTTTAATCTTTGCCATTTGTGGTCCTGACATCAATCAATTCAGTAGTTAAATAATTCTCAATGTGTAATATTGACTTTGGAATGGCTTGGTTACGAGTTGGAATTGCACTTCACAGTAATGCGTTTTGCCCTTTTTACTCATCTTTTGTTGTAGAGAGTACTATCATTATTTGTTGTTATATTCTATAAGGCAGTGGATATGGGATATTAAAGTTGTGTAAAATATGCATTTTTTGAAAAGCTCAATAGACGGTCCATTCCTT

Coding sequence (CDS)

ATGGCGAACACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCCCAGCTGCATCAATTTATATTGCATGCGTCCCTTGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTCTATGTAACCGCTGGTCATACGCGATTGATGTTACTTCACGACTCTCGCAATGACGATGGAATCAAGAGTTTTTTTCAAGAGGTTCATGAGCTTTACATAAAGACTATACTCAATCCTCTCTACTTGCCTGGATCCCGCATCACGTCTTCACATTTTGACACAAAAGTTCGCGCACTCGCAAGGAAGTATCTCTAG

Protein sequence

MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL*
Homology
[Close]
BLAST of MELO3C023193T3 vs. Swiss-Prot
Match: TPPC2_CANLF (Trafficking protein particle complex subunit 2 OS=Canis lupus familiaris GN=TRAPPC2 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.1e-31
Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 1 

Query: 1   MANTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
           M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1   MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61  LKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSR 120
           LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF +V++LYIK  +NP Y P S 
Sbjct: 61  LKTVDKFNEWFVSAFVTAGHMRFIMLHDIRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120

Query: 121 ITSSHFDTKVRALARKYL 136
           I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138

[Close]
BLAST of MELO3C023193T3 vs. Swiss-Prot
Match: TPPC2_PIG (Trafficking protein particle complex subunit 2 OS=Sus scrofa GN=TRAPPC2 PE=2 SV=2)

HSP 1 Score: 135.6 bits (340), Expect = 4.1e-31
Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 1 

Query: 1   MANTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
           M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1   MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61  LKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSR 120
           LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF +V++LYIK  +NP Y P S 
Sbjct: 61  LKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120

Query: 121 ITSSHFDTKVRALARKYL 136
           I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138

[Close]
BLAST of MELO3C023193T3 vs. Swiss-Prot
Match: TPPC2_BOVIN (Trafficking protein particle complex subunit 2 OS=Bos taurus GN=TRAPPC2 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.1e-31
Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 1 

Query: 1   MANTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
           M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1   MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61  LKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSR 120
           LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF +V++LYIK  +NP Y P S 
Sbjct: 61  LKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120

Query: 121 ITSSHFDTKVRALARKYL 136
           I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138

[Close]
BLAST of MELO3C023193T3 vs. Swiss-Prot
Match: TPPC2_MOUSE (Trafficking protein particle complex subunit 2 OS=Mus musculus GN=Trappc2 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.4e-31
Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 1 

Query: 1   MANTACFIIVSRNNIPIYEAEV---GSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
           M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1   MSGSFYFVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61  LKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSR 120
           LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF +V++LYIK  +NP Y P S 
Sbjct: 61  LKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120

Query: 121 ITSSHFDTKVRALARKYL 136
           I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138

[Close]
BLAST of MELO3C023193T3 vs. Swiss-Prot
Match: TPC2B_HUMAN (Trafficking protein particle complex subunit 2B OS=Homo sapiens GN=TRAPPC2B PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.4e-31
Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 1 

Query: 1   MANTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMF 60
           M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+
Sbjct: 1   MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60

Query: 61  LKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSR 120
           LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF +V++LYIK  +NP Y P S 
Sbjct: 61  LKTVDKFNEWFVSAFVTAGHMRFIMLHDIRQEDGIKNFFTDVYDLYIKFSMNPFYEPNSP 120

Query: 121 ITSSHFDTKVRALARKYL 136
           I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138

[Close]
BLAST of MELO3C023193T3 vs. TrEMBL
Match: M5XZB8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013209mg PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 6.1e-66
Identity = 126/135 (93.33%), Postives = 133/135 (98.52%), Query Frame = 1 

Query: 1   MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
           MA TACF+IVSRN+IPIYEAEVGSA KRED+AQLHQFILHA+LDIVQDLAWTTSAM+LKA
Sbjct: 1   MATTACFVIVSRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMYLKA 60

Query: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 120
           +DRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKT+LNPLYLPGSRITS
Sbjct: 61  IDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTLLNPLYLPGSRITS 120

Query: 121 SHFDTKVRALARKYL 136
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

[Close]
BLAST of MELO3C023193T3 vs. TrEMBL
Match: A0A067FL79_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032720mg PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.4e-65
Identity = 127/135 (94.07%), Postives = 131/135 (97.04%), Query Frame = 1 

Query: 1   MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
           MA TACFIIVSRN IPIYEAEVGSAVKRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1   MATTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 120
           +DRFNDLVVSVYVTAGHTR MLLHDSRNDDGIKSFFQEVHELYIK +LNPLYLPGSRITS
Sbjct: 61  IDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITS 120

Query: 121 SHFDTKVRALARKYL 136
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

[Close]
BLAST of MELO3C023193T3 vs. TrEMBL
Match: A0A061EJF7_THECC (SNARE-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_019945 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 2.3e-65
Identity = 126/135 (93.33%), Postives = 131/135 (97.04%), Query Frame = 1 

Query: 1   MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
           MA TACFIIVSRN+IPIYEAEVGSA KRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1   MATTACFIIVSRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 120
           +DRFNDLVVSVYVTAGHTR MLLHDSRNDDGIKSFFQEVHELYIK +LNPLYLPGSRITS
Sbjct: 61  IDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKVLLNPLYLPGSRITS 120

Query: 121 SHFDTKVRALARKYL 136
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

[Close]
BLAST of MELO3C023193T3 vs. TrEMBL
Match: A0A061EID8_THECC (SNARE-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_019945 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 3.0e-65
Identity = 126/135 (93.33%), Postives = 131/135 (97.04%), Query Frame = 1 

Query: 1   MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
           MA TACFIIVSRN+IPIYEAEVGSA KRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1   MATTACFIIVSRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 120
           +DRFNDLVVSVYVTAGHTR MLLHDSRNDDGIKSFFQEVHELYIK +LNPLYLPGSRITS
Sbjct: 61  IDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITS 120

Query: 121 SHFDTKVRALARKYL 136
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

[Close]
BLAST of MELO3C023193T3 vs. TrEMBL
Match: F4HTY0_ARATH (SNARE-like protein OS=Arabidopsis thaliana GN=At1g80500 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 4.0e-65
Identity = 125/135 (92.59%), Postives = 132/135 (97.78%), Query Frame = 1 

Query: 1   MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
           MANTACFIIV RN+IPIYEAEVGSA KRED+AQLHQFILHA+LD+VQDLAWTTSAMFLK+
Sbjct: 1   MANTACFIIVGRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKS 60

Query: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 120
           VDRFNDLVVSVYVTAGHTRLMLLHDSRN+DGIKSFFQEVHELYIK +LNPLYLPGSRITS
Sbjct: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITS 120

Query: 121 SHFDTKVRALARKYL 136
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

[Close]
BLAST of MELO3C023193T3 vs. TAIR10
Match: AT1G80500.1 (AT1G80500.1 SNARE-like superfamily protein)

HSP 1 Score: 255.4 bits (651), Expect = 2.0e-68
Identity = 125/135 (92.59%), Postives = 130/135 (96.30%), Query Frame = 1 

Query: 1   MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
           MANTACFIIV RN+IPIYEAEVGSA KRED+AQLHQFILHA+LD+VQDLAWTTSAMFLK+
Sbjct: 1   MANTACFIIVGRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKS 60

Query: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 120
           VDRFNDLVVSVYVTAGHTRLMLLHDSRN+DGIKSFFQEVHELYIK +LNPLYLPGSRITS
Sbjct: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITS 120

Query: 121 SHFDTKVRALARKYL 136
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

[Close]
BLAST of MELO3C023193T3 vs. TAIR10
Match: AT2G20930.1 (AT2G20930.1 SNARE-like superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.8e-08
Identity = 37/138 (26.81%), Postives = 66/138 (47.83%), Query Frame = 1 

Query: 6   CFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLA-------WTTSAMFL 65
           C  +V   N P+Y   + S    +D+ +LH  I+H SLD++++          T +  FL
Sbjct: 4   CVAVVGHQNNPLY---IQSFTDADDALKLHH-IVHCSLDVIEERVNNPKKSGTTLNEAFL 63

Query: 66  KAVDRFNDLVVSVYVTAGHTRLMLLHDSRN--DDGIKSFFQEVHELYIKTILNPLYLPGS 125
             +    +  V  Y+T    + +L+    +  D  ++SFF++ H  Y+  + NP ++PG 
Sbjct: 64  GLLYPTVNYKVYGYLTNTKVKFILVTTDLDVRDTDVRSFFRKFHAAYVDAVSNPFHVPGK 123

Query: 126 RITSSHFDTKVRALARKY 135
           +ITS  F   V  +   Y
Sbjct: 124 KITSRTFAQTVSNIVGSY 137

[Close]
BLAST of MELO3C023193T3 vs. NCBI nr
Match: gi|659121801|ref|XP_008460820.1| (PREDICTED: trafficking protein particle complex subunit 2 [Cucumis melo])

HSP 1 Score: 268.9 bits (686), Expect = 5.0e-69
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1 

Query: 1   MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
           MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1   MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 120
           VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS
Sbjct: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 120

Query: 121 SHFDTKVRALARKYL 136
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

[Close]
BLAST of MELO3C023193T3 vs. NCBI nr
Match: gi|449459192|ref|XP_004147330.1| (PREDICTED: transport protein particle 20 kDa subunit isoform X2 [Cucumis sativus])

HSP 1 Score: 266.2 bits (679), Expect = 3.2e-68
Identity = 133/135 (98.52%), Postives = 134/135 (99.26%), Query Frame = 1 

Query: 1   MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
           MA TACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1   MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 120
           VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSR+TS
Sbjct: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVTS 120

Query: 121 SHFDTKVRALARKYL 136
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

[Close]
BLAST of MELO3C023193T3 vs. NCBI nr
Match: gi|778670342|ref|XP_011649448.1| (PREDICTED: transport protein particle 20 kDa subunit isoform X1 [Cucumis sativus])

HSP 1 Score: 261.5 bits (667), Expect = 8.0e-67
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 1 

Query: 1   MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
           MA TACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA
Sbjct: 1   MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60

Query: 61  VDRFNDLVVSVYVTAG-HTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRIT 120
           VDRFNDLVVSVYVTAG HTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSR+T
Sbjct: 61  VDRFNDLVVSVYVTAGLHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRVT 120

Query: 121 SSHFDTKVRALARKYL 136
           SSHFDTKVRALARKYL
Sbjct: 121 SSHFDTKVRALARKYL 136

[Close]
BLAST of MELO3C023193T3 vs. NCBI nr
Match: gi|596289200|ref|XP_007226059.1| (hypothetical protein PRUPE_ppa013209mg [Prunus persica])

HSP 1 Score: 258.1 bits (658), Expect = 8.8e-66
Identity = 126/135 (93.33%), Postives = 133/135 (98.52%), Query Frame = 1 

Query: 1   MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
           MA TACF+IVSRN+IPIYEAEVGSA KRED+AQLHQFILHA+LDIVQDLAWTTSAM+LKA
Sbjct: 1   MATTACFVIVSRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMYLKA 60

Query: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 120
           +DRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKT+LNPLYLPGSRITS
Sbjct: 61  IDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTLLNPLYLPGSRITS 120

Query: 121 SHFDTKVRALARKYL 136
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

[Close]
BLAST of MELO3C023193T3 vs. NCBI nr
Match: gi|568882443|ref|XP_006494040.1| (PREDICTED: trafficking protein particle complex subunit 2 [Citrus sinensis])

HSP 1 Score: 257.7 bits (657), Expect = 1.2e-65
Identity = 127/135 (94.07%), Postives = 132/135 (97.78%), Query Frame = 1 

Query: 1   MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKA 60
           MA TACFIIVSRN IPIYEAEVGSAVKRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA
Sbjct: 1   MATTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60

Query: 61  VDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITS 120
           +DRFNDLVVSVYVTAGHTR MLLHDSRNDDGIKSFFQEVHELYIK++LNPLYLPGSRITS
Sbjct: 61  IDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKSLLNPLYLPGSRITS 120

Query: 121 SHFDTKVRALARKYL 136
           SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135

The following BLAST results are available for this feature:
BLAST of MELO3C023193T3 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TPPC2_CANLF4.1e-3147.10Trafficking protein particle complex subunit 2 OS=Canis lupus familiaris GN=TRAP... [more]
TPPC2_PIG4.1e-3147.10Trafficking protein particle complex subunit 2 OS=Sus scrofa GN=TRAPPC2 PE=2 SV=... [more]
TPPC2_BOVIN4.1e-3147.10Trafficking protein particle complex subunit 2 OS=Bos taurus GN=TRAPPC2 PE=2 SV=... [more]
TPPC2_MOUSE5.4e-3147.10Trafficking protein particle complex subunit 2 OS=Mus musculus GN=Trappc2 PE=1 S... [more]
TPC2B_HUMAN5.4e-3147.10Trafficking protein particle complex subunit 2B OS=Homo sapiens GN=TRAPPC2B PE=1... [more]
BLAST of MELO3C023193T3 vs. TrEMBL
Match NameE-valueIdentityDescription
M5XZB8_PRUPE6.1e-6693.33Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013209mg PE=4 SV=1[more]
A0A067FL79_CITSI1.4e-6594.07Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032720mg PE=4 SV=1[more]
A0A061EJF7_THECC2.3e-6593.33SNARE-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_019945 PE=4 S... [more]
A0A061EID8_THECC3.0e-6593.33SNARE-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_019945 PE=4 S... [more]
F4HTY0_ARATH4.0e-6592.59SNARE-like protein OS=Arabidopsis thaliana GN=At1g80500 PE=4 SV=1[more]
BLAST of MELO3C023193T3 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80500.12.0e-6892.59 SNARE-like superfamily protein[more]
AT2G20930.11.8e-0826.81 SNARE-like superfamily protein[more]
BLAST of MELO3C023193T3 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659121801|ref|XP_008460820.1|5.0e-69100.00PREDICTED: trafficking protein particle complex subunit 2 [Cucumis melo][more]
gi|449459192|ref|XP_004147330.1|3.2e-6898.52PREDICTED: transport protein particle 20 kDa subunit isoform X2 [Cucumis sativus... [more]
gi|778670342|ref|XP_011649448.1|8.0e-6797.79PREDICTED: transport protein particle 20 kDa subunit isoform X1 [Cucumis sativus... [more]
gi|596289200|ref|XP_007226059.1|8.8e-6693.33hypothetical protein PRUPE_ppa013209mg [Prunus persica][more]
gi|568882443|ref|XP_006494040.1|1.2e-6594.07PREDICTED: trafficking protein particle complex subunit 2 [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR006722Sedlin
IPR011012Longin-like_dom_sf
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006888ER to Golgi vesicle-mediated transport
GO:0006810transport
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0006810 transport
cellular_component GO:0005622 intracellular
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C023193MELO3C023193gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C023193T3MELO3C023193T3-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C023193T3.cds1MELO3C023193T3.cds1CDS
MELO3C023193T3.cds2MELO3C023193T3.cds2CDS
MELO3C023193T3.cds3MELO3C023193T3.cds3CDS
MELO3C023193T3.cds4MELO3C023193T3.cds4CDS
MELO3C023193T3.cds5MELO3C023193T3.cds5CDS


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006722Trafficking protein particle complex subunit 2PANTHERPTHR12403MBP-1 INTERACTING PROTEIN-2Acoord: 1..135
score: 2.3
IPR006722Trafficking protein particle complex subunit 2PFAMPF04628Sedlin_Ncoord: 9..133
score: 7.8
IPR011012Longin-like domainunknownSSF64356SNARE-likecoord: 1..135
score: 1.83
NoneNo IPR availableGENE3DG3DSA:3.30.450.70coord: 3..135
score: 9.6
NoneNo IPR availablePANTHERPTHR12403:SF14SUBFAMILY NOT NAMEDcoord: 1..135
score: 2.3