MELO3C023193T1 (mRNA) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.AGAGACCTTCCGAATTGCTACTCAGAATGGCGAACACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAGTATTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTGCTTTCCATTTTGTTTTTCATGTTTAGGCTGAATGTTTCCTTCACAAGATCGCCAATAAAAGGTGATATCGTTAATTACTTTAGTTTTGACTGTCATTAGTCGCTCATCTTTTTGGCATGACATGAAAGAGAGAGGATTCCGCCCAGCTGCATCAATTTATATTGCATGCGTCCCTTGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTGAGTTCGCATTCCTTCTAGTTCTTTATTAGATCATCGAGACGCCTCCTCTATCTTATTTTTCTTTTTGTTCTTTTCCCCTTTAAATTTCGCCTTAACTACCTTTTTGGATTTTATGCAGGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTCTATGTAACCGCTGGTCATATCCTTTAATGTCGAGAGGGTTTGTCAGGCACACTATGTTGGAAATTGTGTCAAATTTCATTAATGCACGCACCCGTAAAACTCAACTCTAAATTAATGAAAGTTTTATCTTTG AGAGACCTTCCGAATTGCTACTCAGAATGGCGAACACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCCCAGCTGCATCAATTTATATTGCATGCGTCCCTTGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTCTATGTAACCGCTGGTCATATCCTTTAATGTCGAGAGGGTTTGTCAGGCACACTATGTTGGAAATTGTGTCAAATTTCATTAATGCACGCACCCGTAAAACTCAACTCTAAATTAATGAAAGTTTTATCTTTG ATGGCGAACACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCCCAGCTGCATCAATTTATATTGCATGCGTCCCTTGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTCTATGTAACCGCTGGTCATATCCTTTAA MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHIL*
BLAST of MELO3C023193T1 vs. Swiss-Prot
Match: TPC2B_HUMAN (Trafficking protein particle complex subunit 2B OS=Homo sapiens GN=TRAPPC2B PE=1 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.5e-12 Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 1
BLAST of MELO3C023193T1 vs. Swiss-Prot
Match: TPPC2_PONAB (Trafficking protein particle complex subunit 2 OS=Pongo abelii GN=TRAPPC2 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.5e-12 Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 1
BLAST of MELO3C023193T1 vs. Swiss-Prot
Match: TPPC2_PIG (Trafficking protein particle complex subunit 2 OS=Sus scrofa GN=TRAPPC2 PE=2 SV=2) HSP 1 Score: 73.2 bits (178), Expect = 1.5e-12 Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 1
BLAST of MELO3C023193T1 vs. Swiss-Prot
Match: TPPC2_CANLF (Trafficking protein particle complex subunit 2 OS=Canis lupus familiaris GN=TRAPPC2 PE=3 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.5e-12 Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 1
BLAST of MELO3C023193T1 vs. Swiss-Prot
Match: TPPC2_BOVIN (Trafficking protein particle complex subunit 2 OS=Bos taurus GN=TRAPPC2 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.5e-12 Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 1
BLAST of MELO3C023193T1 vs. TrEMBL
Match: A0A0A0LQF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338800 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 4.3e-35 Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 1
BLAST of MELO3C023193T1 vs. TrEMBL
Match: A0A067F9D4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032720mg PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 1.4e-33 Identity = 74/79 (93.67%), Postives = 77/79 (97.47%), Query Frame = 1
BLAST of MELO3C023193T1 vs. TrEMBL
Match: Q9M8L8_ARATH (At1g80500 OS=Arabidopsis thaliana GN=T21F11.17 PE=2 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 4.0e-33 Identity = 72/79 (91.14%), Postives = 77/79 (97.47%), Query Frame = 1
BLAST of MELO3C023193T1 vs. TrEMBL
Match: M4F279_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 6.9e-33 Identity = 72/79 (91.14%), Postives = 77/79 (97.47%), Query Frame = 1
BLAST of MELO3C023193T1 vs. TrEMBL
Match: A0A0D3BTW9_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 6.9e-33 Identity = 71/79 (89.87%), Postives = 78/79 (98.73%), Query Frame = 1
BLAST of MELO3C023193T1 vs. TAIR10
Match: AT1G80500.1 (AT1G80500.1 SNARE-like superfamily protein) HSP 1 Score: 145.2 bits (365), Expect = 1.7e-35 Identity = 70/77 (90.91%), Postives = 73/77 (94.81%), Query Frame = 1
BLAST of MELO3C023193T1 vs. NCBI nr
Match: gi|700207117|gb|KGN62236.1| (hypothetical protein Csa_2G338800 [Cucumis sativus]) HSP 1 Score: 154.8 bits (390), Expect = 6.2e-35 Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 1
BLAST of MELO3C023193T1 vs. NCBI nr
Match: gi|659121801|ref|XP_008460820.1| (PREDICTED: trafficking protein particle complex subunit 2 [Cucumis melo]) HSP 1 Score: 154.1 bits (388), Expect = 1.1e-34 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1
BLAST of MELO3C023193T1 vs. NCBI nr
Match: gi|449459192|ref|XP_004147330.1| (PREDICTED: transport protein particle 20 kDa subunit isoform X2 [Cucumis sativus]) HSP 1 Score: 151.8 bits (382), Expect = 5.2e-34 Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 1
BLAST of MELO3C023193T1 vs. NCBI nr
Match: gi|641845079|gb|KDO63968.1| (hypothetical protein CISIN_1g032720mg [Citrus sinensis]) HSP 1 Score: 149.8 bits (377), Expect = 2.0e-33 Identity = 74/79 (93.67%), Postives = 77/79 (97.47%), Query Frame = 1
BLAST of MELO3C023193T1 vs. NCBI nr
Match: gi|778670342|ref|XP_011649448.1| (PREDICTED: transport protein particle 20 kDa subunit isoform X1 [Cucumis sativus]) HSP 1 Score: 148.7 bits (374), Expect = 4.4e-33 Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
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