MELO3C023168.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCACCAGTATCTCTGAAACAAACAGTGTCTGAAAGTTCACGAAAATTGACCTGAAATAAACTGGGCCTTAAAAGTATTATGGGGCCTATAGACACCTAAAATTTAATAATTTTCCCTCTAGGGCTTTTGGCGAGCAGAGGAACGAAGACTTCCGGTGCCAAATTCTCAGAGGTTCATCAATGGCTCCGAAGACAGCAAGAGTTAGCAGAAATCCTGAACTCATTCGAGGGGTTGGCAAATACTCGAGGTCAAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTATCTTCCCTCGCCATGATGCCAAGCCTAAGGCAGATTCTCCAGCTGAGAAGCCACCCAAATTTTACCCTGCCGTTGATGTCAAGAAACCACTTGTTAACAAGCGCAAACCCAAGCCCACCAAACTTAGGTTCATCTCTCTCGATCTTCTTTCTTTCCATGCTATGTTTTTACACAATGTCTTGGAATCCATATTGCTTTCTGATGAATTGGAGTAAATAGAGTTCATTCTGTAGCTATGGAAGAGGGAATTTCTGAAGAGAGATTAGTTTTACGCTTGATTTGAGTTTTTGGTTTCTAATTGGGTGATCTGAAGTGAATTTTTGCTCAATTTTCTATTAAGCAATATTGGGTTCAGGGGGTGTGTGCATCTAACTTAGTTTTGTTAATTTTTATGCTTTTTGCAGGTCCAGCATTACTCCTGGAACCGTGCTGATCATTCTTACTGGAAGGTTTAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGGCTGCTTTTAGTGACTGGTGTGTTTTGATGAATTTCTCTAATTGCCTTTCTTTATAAATTTTGTTTGATATCAAACAGTATTGGGGATTCTGATCATGGGGTTGGTTTTTGTTTCTCCACATTCATTGTGGACTTGTGTTAGATTTTGCATGTTAGTTATGATATCTTAGCATCATAAAAATTATTTGCCTTTGTTTTACATATTATGTCAAATGCGTTACCTGCATAACGTTTACCTTCGAGAAGTAAGAAGTTGGATACTTTGGGTTTTACATTTTGGCAGTATTAATTGTTGAACCTCGAGAGCAGTAATATTGAGACGTCTCATGTTTTGTATTCTTGCCCATTTCTCCGGCCAATGGACTTTACATACCACTAAAATGTCTCATGCTTCCTTTTATGAATATATGCTGTGCTAATGGTCGTTTCATGCCATAAGTTTCTAAGCTTTATGTGCATTATCTCCTACTGTTCTCTTCTGATGGTTGTGGGCACGGGTAGGGGTTAGTTTCGGTGTAGTCCTACATGTTTAGGCGAAAGGATGTATATAAAATAGTGATTAGCCGAGGCTATTGATTTTAAATTAGCAATTCTTGAACCTGCTAAGGATTATCTGAATTTGATTTTTGTCATTTTAGGGCCATTCAAGGTCAATGGTGTTCCATTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTGCAGGAGTCAATGTGGAGAAATTTCATGACAAATATTTCTCCAAGGAAGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGTTCTTATCCTGTTTTTGTTTTGTTCAAATAGTTTAAAGTTTTATCATTTCCTTGTCCTGATTCGTGGTTGCCATTGTTACATGCAGGAAAAAAGTGCACTCCCACAGGTGAAAAAGGATGATCAAAAGGCCGTGGACTCAGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTAAAGACATACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAGCCACATGAGCTTGTTTTCTAGATATTTTCTGTTTGGTTTCTGATACTTCTCTTGTGGAATTTGATCCCTATAATCTTCTTGTTCATGTTTTGTTATGAGGGTTGTAGATTTGAATTATGTCTCGCAATGAATTTTGTAGTGAAGTTTATTCATCAAATCCTGCTTTACATGGCTTCCTTTGACTAGTGATAGTGATAAGACATGTAATTTTTGTTCAGTTTCTGGCGTGAAATACTTGAGAAACACATTGATCAAGATAGATCGGTTGACTTACAATGGTTGGCCATGTTTGATTAGTATGCAACGTCACAGTTACTGTGTGGGAAATGTATGCTTGAATCTCATA CCACCAGTATCTCTGAAACAAACAGTGTCTGAAAGTTCACGAAAATTGACCTGAAATAAACTGGGCCTTAAAAGTATTATGGGGCCTATAGACACCTAAAATTTAATAATTTTCCCTCTAGGGCTTTTGGCGAGCAGAGGAACGAAGACTTCCGGTGCCAAATTCTCAGAGGTTCATCAATGGCTCCGAAGACAGCAAGAGTTAGCAGAAATCCTGAACTCATTCGAGGGGTTGGCAAATACTCGAGGTCAAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTATCTTCCCTCGCCATGATGCCAAGCCTAAGGCAGATTCTCCAGCTGAGAAGCCACCCAAATTTTACCCTGCCGTTGATGTCAAGAAACCACTTGTTAACAAGCGCAAACCCAAGCCCACCAAACTTAGGTCCAGCATTACTCCTGGAACCGTGCTGATCATTCTTACTGGAAGGTTTAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGGCTGCTTTTAGTGACTGGGCCATTCAAGGTCAATGGTGTTCCATTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTGCAGGAGTCAATGTGGAGAAATTTCATGACAAATATTTCTCCAAGGAAGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGAAAAAAGTGCACTCCCACAGGTGAAAAAGGATGATCAAAAGGCCGTGGACTCAGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTAAAGACATACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAGCCACATGAGCTTGTTTTCTAGATATTTTCTGTTTGGTTTCTGATACTTCTCTTGTGGAATTTGATCCCTATAATCTTCTTGTTCATGTTTTGTTATGAGGGTTGTAGATTTGAATTATGTCTCGCAATGAATTTTGTAGTGAAGTTTATTCATCAAATCCTGCTTTACATGGCTTCCTTTGACTAGTGATAGTGATAAGACATGTAATTTTTGTTCAGTTTCTGGCGTGAAATACTTGAGAAACACATTGATCAAGATAGATCGGTTGACTTACAATGGTTGGCCATGTTTGATTAGTATGCAACGTCACAGTTACTGTGTGGGAAATGTATGCTTGAATCTCATA ATGGCTCCGAAGACAGCAAGAGTTAGCAGAAATCCTGAACTCATTCGAGGGGTTGGCAAATACTCGAGGTCAAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTATCTTCCCTCGCCATGATGCCAAGCCTAAGGCAGATTCTCCAGCTGAGAAGCCACCCAAATTTTACCCTGCCGTTGATGTCAAGAAACCACTTGTTAACAAGCGCAAACCCAAGCCCACCAAACTTAGGTCCAGCATTACTCCTGGAACCGTGCTGATCATTCTTACTGGAAGGTTTAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGGCTGCTTTTAGTGACTGGGCCATTCAAGGTCAATGGTGTTCCATTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTGCAGGAGTCAATGTGGAGAAATTTCATGACAAATATTTCTCCAAGGAAGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGAAAAAAGTGCACTCCCACAGGTGAAAAAGGATGATCAAAAGGCCGTGGACTCAGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTAAAGACATACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAGCCACATGAGCTTGTTTTCTAG MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
BLAST of MELO3C023168.2.1 vs. NCBI nr
Match: XP_008460790.1 (PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo]) HSP 1 Score: 444.9 bits (1143), Expect = 1.7e-121 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0
BLAST of MELO3C023168.2.1 vs. NCBI nr
Match: XP_004150161.2 (PREDICTED: 60S ribosomal protein L6-1-like [Cucumis sativus]) HSP 1 Score: 432.2 bits (1110), Expect = 1.1e-117 Identity = 225/231 (97.40%), Postives = 227/231 (98.27%), Query Frame = 0
BLAST of MELO3C023168.2.1 vs. NCBI nr
Match: KGN53829.1 (hypothetical protein Csa_4G153800 [Cucumis sativus]) HSP 1 Score: 432.2 bits (1110), Expect = 1.1e-117 Identity = 225/231 (97.40%), Postives = 227/231 (98.27%), Query Frame = 0
BLAST of MELO3C023168.2.1 vs. NCBI nr
Match: XP_022935449.1 (60S ribosomal protein L6-1-like [Cucurbita moschata]) HSP 1 Score: 425.2 bits (1092), Expect = 1.4e-115 Identity = 220/231 (95.24%), Postives = 226/231 (97.84%), Query Frame = 0
BLAST of MELO3C023168.2.1 vs. NCBI nr
Match: XP_004149609.1 (PREDICTED: 60S ribosomal protein L6-2-like [Cucumis sativus] >KGN58615.1 hypothetical protein Csa_3G698560 [Cucumis sativus]) HSP 1 Score: 424.5 bits (1090), Expect = 2.3e-115 Identity = 220/231 (95.24%), Postives = 226/231 (97.84%), Query Frame = 0
BLAST of MELO3C023168.2.1 vs. TAIR10
Match: AT1G74050.1 (Ribosomal protein L6 family protein) HSP 1 Score: 369.0 bits (946), Expect = 2.1e-102 Identity = 186/228 (81.58%), Postives = 206/228 (90.35%), Query Frame = 0
BLAST of MELO3C023168.2.1 vs. TAIR10
Match: AT1G74060.1 (Ribosomal protein L6 family protein) HSP 1 Score: 366.3 bits (939), Expect = 1.4e-101 Identity = 185/228 (81.14%), Postives = 205/228 (89.91%), Query Frame = 0
BLAST of MELO3C023168.2.1 vs. TAIR10
Match: AT1G18540.1 (Ribosomal protein L6 family protein) HSP 1 Score: 319.7 bits (818), Expect = 1.5e-87 Identity = 165/230 (71.74%), Postives = 184/230 (80.00%), Query Frame = 0
BLAST of MELO3C023168.2.1 vs. Swiss-Prot
Match: sp|Q9C9C5|RL63_ARATH (60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 3.8e-101 Identity = 186/228 (81.58%), Postives = 206/228 (90.35%), Query Frame = 0
BLAST of MELO3C023168.2.1 vs. Swiss-Prot
Match: sp|Q9C9C6|RL62_ARATH (60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 2.5e-100 Identity = 185/228 (81.14%), Postives = 205/228 (89.91%), Query Frame = 0
BLAST of MELO3C023168.2.1 vs. Swiss-Prot
Match: sp|P34091|RL6_MESCR (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 9.4e-100 Identity = 186/224 (83.04%), Postives = 200/224 (89.29%), Query Frame = 0
BLAST of MELO3C023168.2.1 vs. Swiss-Prot
Match: sp|Q9FZ76|RL61_ARATH (60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 2.7e-86 Identity = 165/230 (71.74%), Postives = 184/230 (80.00%), Query Frame = 0
BLAST of MELO3C023168.2.1 vs. Swiss-Prot
Match: sp|Q6QMZ4|RL6_CHILA (60S ribosomal protein L6 OS=Chinchilla lanigera OX=34839 GN=RPL6 PE=2 SV=3) HSP 1 Score: 174.9 bits (442), Expect = 1.1e-42 Identity = 114/246 (46.34%), Postives = 146/246 (59.35%), Query Frame = 0
BLAST of MELO3C023168.2.1 vs. TrEMBL
Match: tr|A0A1S3CD97|A0A1S3CD97_CUCME (60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103499552 PE=3 SV=1) HSP 1 Score: 444.9 bits (1143), Expect = 1.1e-121 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0
BLAST of MELO3C023168.2.1 vs. TrEMBL
Match: tr|A0A0A0KYA4|A0A0A0KYA4_CUCSA (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_4G153800 PE=3 SV=1) HSP 1 Score: 432.2 bits (1110), Expect = 7.4e-118 Identity = 225/231 (97.40%), Postives = 227/231 (98.27%), Query Frame = 0
BLAST of MELO3C023168.2.1 vs. TrEMBL
Match: tr|A0A0A0L9J7|A0A0A0L9J7_CUCSA (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1) HSP 1 Score: 424.5 bits (1090), Expect = 1.6e-115 Identity = 220/231 (95.24%), Postives = 226/231 (97.84%), Query Frame = 0
BLAST of MELO3C023168.2.1 vs. TrEMBL
Match: tr|A0A1S3CFY6|A0A1S3CFY6_CUCME (60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103500301 PE=3 SV=1) HSP 1 Score: 422.5 bits (1085), Expect = 5.9e-115 Identity = 219/231 (94.81%), Postives = 224/231 (96.97%), Query Frame = 0
BLAST of MELO3C023168.2.1 vs. TrEMBL
Match: tr|A0A2P4HVI6|A0A2P4HVI6_QUESU (60S ribosomal protein L6 OS=Quercus suber OX=58331 GN=CFP56_17364 PE=3 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 1.9e-105 Identity = 202/233 (86.70%), Postives = 218/233 (93.56%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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