MELO3C022235T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C022235T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Cell number regulator 12
Location	chr11 : 28996544 .. 28998263 (-)
Sequence length	824

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGATAGAATTACCAAAATTGCAAAAGGGTTTCATTCATATGTCAATGATTTAATGTTATGATTAATTAAGATCCAGGTTGAGATTTTGTTTTAATTTTGGGTGAAATAATATAATGGCAGAGGGAAGTGCACAATCAAGATATGTGAGATTGACAAAGGATCAAGGGCCATTGGAGGACATAACCCCTGGAGAGCTTAATCAACCTATTCAAGTCCCACAGGTTTTTTTTTCTTTTCTCCCTCTCTGTTTCTTTTTTGTTTGATTACGAAATCTATGTCGTAAACTTTCGCATTCGTGTTGATTAGGTCTTGAGATTCTTTAGCTTTTAATTTTGTATCCAATAAAGTTCTTTATGTATTCAACATTGTCTATCGGGTGTGATTGTGCACTTCTCTCCGTTTTTATCAATTAATTTCTTTTTGATTTTGGATCATGACAAGAGTGCTAAGGGATTTCAAGCGAATTTGTAAATTTTAAAAAGTGTTTGAATGGTCATGGAGCCTATTACACGAAACAATTTCTATATTTTGTGTGTGTTGTTCTTAAATAAAATAAAGATGTAACACGTCACATCCTTTGTTAAATAATGTAACTCTGTATGCAGATATATTTACTTGTCAATTGTTCCTAATGTGACAATTTTTGTTTTGGTACAAACACAGTTAATTGTTCATAGATGTGAGGAATGTGGGCAGCCGCTACCAGAAAGCTATCAGCCACCAGCCGATGAAGATTGGACTACTGGCATTTGTGGTTGTTTACAAGATCCTAAGACGTGTAAGAATCTTTAAAACACTTCTTTTTTTTTTTCCTCTTTTAAGTACTTGTCAAAGACCCTTAATCGAAAAATGAATAAAGTACTTATTTTGAAAACTAATGACATAGAAGATATGAATTATGAATGAAATTGTTTGTTTAGGTTAATGTATTAAATCTTCCCTTTCTCGATGTATTTACTATTTTGTTCAATTTGAAGAAGCTCGCCCCTTGCGTACTTCTTTTTGTGATATCAATGCATATATTTTTAGTTTGATGGTACAATGAAAATATTACTAACGTATCAACCTAGTTAAGATGTTACGGTACACTACTTACTAACTTTGGTAATGGTTGGTACTATTACTAGGTTGGAGAGGGATGTTCTGTCCATGTGTGTTATTTGGTGAAAATGTAGAGACATTGAGAGAAGAAATTCCATGGCAAAATGCATGTGTTTGTCATGCAATGTGTGTAGAAGGAGGAATGGCTGTGGCAGCTGCAACAGCACTTTTCCATGGCATTGATCCCCAAACTTCATTTCTGATTTCTGAAACCCTGATGTTTGCTTGGTGGATGTGTGGCATTTATACTGGCTTGTTTCGCCAATCATTGCAAAAGAAATATCATCTCAAGGTTGGTTCGATAACCATTTTTAATTTCTTACTTGATATAGTTAATCTTATTAAAATATACATACCATTTCCTATATATTTATATGTTTCTTTCTTTTTCTCGTAGAACTCTCCATGTGACCCATGTTTGGTGCATTGTTGCATGCACTGGTGTGCTCTTTGTCAAGAAAATAGAGAGATGAGGAACCATCTTTCTGATAACCTTACAATGCAAATGACTGTTATCGATCCTCCTGCCCTTCAAGCGATGAATACCAACGATGATAACGAACCTCCACCTTCTTCCTCGATCGTGCCGTCTCGAGAACTCGCCATCACGCCGATTTAG

mRNA sequence

TGATAGAATTACCAAAATTGCAAAAGGGTTTCATTCATATGTCAATGATTTAATGTTATGATTAATTAAGATCCAGGTTGAGATTTTGTTTTAATTTTGGGTGAAATAATATAATGGCAGAGGGAAGTGCACAATCAAGATATGTGAGATTGACAAAGGATCAAGGGCCATTGGAGGACATAACCCCTGGAGAGCTTAATCAACCTATTCAAGTCCCACAGTTAATTGTTCATAGATGTGAGGAATGTGGGCAGCCGCTACCAGAAAGCTATCAGCCACCAGCCGATGAAGATTGGACTACTGGCATTTGTGGTTGTTTACAAGATCCTAAGACGTGTTGGAGAGGGATGTTCTGTCCATGTGTGTTATTTGGTGAAAATGTAGAGACATTGAGAGAAGAAATTCCATGGCAAAATGCATGTGTTTGTCATGCAATGTGTGTAGAAGGAGGAATGGCTGTGGCAGCTGCAACAGCACTTTTCCATGGCATTGATCCCCAAACTTCATTTCTGATTTCTGAAACCCTGATGTTTGCTTGGTGGATGTGTGGCATTTATACTGGCTTGTTTCGCCAATCATTGCAAAAGAAATATCATCTCAAGAACTCTCCATGTGACCCATGTTTGGTGCATTGTTGCATGCACTGGTGTGCTCTTTGTCAAGAAAATAGAGAGATGAGGAACCATCTTTCTGATAACCTTACAATGCAAATGACTGTTATCGATCCTCCTGCCCTTCAAGCGATGAATACCAACGATGATAACGAACCTCCACCTTCTTCCTCGATCGTGCCGTCTCGAGAACTCGCCATCACGCCGATTTAG

Coding sequence (CDS)

ATGGCAGAGGGAAGTGCACAATCAAGATATGTGAGATTGACAAAGGATCAAGGGCCATTGGAGGACATAACCCCTGGAGAGCTTAATCAACCTATTCAAGTCCCACAGTTAATTGTTCATAGATGTGAGGAATGTGGGCAGCCGCTACCAGAAAGCTATCAGCCACCAGCCGATGAAGATTGGACTACTGGCATTTGTGGTTGTTTACAAGATCCTAAGACGTGTTGGAGAGGGATGTTCTGTCCATGTGTGTTATTTGGTGAAAATGTAGAGACATTGAGAGAAGAAATTCCATGGCAAAATGCATGTGTTTGTCATGCAATGTGTGTAGAAGGAGGAATGGCTGTGGCAGCTGCAACAGCACTTTTCCATGGCATTGATCCCCAAACTTCATTTCTGATTTCTGAAACCCTGATGTTTGCTTGGTGGATGTGTGGCATTTATACTGGCTTGTTTCGCCAATCATTGCAAAAGAAATATCATCTCAAGAACTCTCCATGTGACCCATGTTTGGTGCATTGTTGCATGCACTGGTGTGCTCTTTGTCAAGAAAATAGAGAGATGAGGAACCATCTTTCTGATAACCTTACAATGCAAATGACTGTTATCGATCCTCCTGCCCTTCAAGCGATGAATACCAACGATGATAACGAACCTCCACCTTCTTCCTCGATCGTGCCGTCTCGAGAACTCGCCATCACGCCGATTTAG

Protein sequence

MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADEDWTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCALCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNEPPPSSSIVPSRELAITPI*

Homology

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BLAST of MELO3C022235T1 vs. Swiss-Prot
Match: CNR6_MAIZE (Cell number regulator 6 OS=Zea mays GN=CNR6 PE=2 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.4e-87
Identity = 141/218 (64.68%), Postives = 169/218 (77.52%), Query Frame = 1


Query: 2   AEGSAQSRYVRLTKDQ-GPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 61
           A  S  SRYV+LTKDQ  P EDI PGELNQP+ VPQL   RC ECGQ LPESY+PPADE 
Sbjct: 5   ATSSHPSRYVKLTKDQDAPAEDIRPGELNQPVHVPQLEGRRCSECGQVLPESYEPPADEP 64

Query: 62  WTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 121
           WTTGI GC  DP+TC  G+FCPCVLFG NVE +RE+IPW   CVCHA+ VEGG+ +A  T
Sbjct: 65  WTTGIFGCTDDPETCRTGLFCPCVLFGRNVEAVREDIPWTTPCVCHAVFVEGGITLAILT 124

Query: 122 ALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 181
           A+FHG+DP+TSFLI E L+F+WW+C  YTG+FRQ LQ+KYHLKNSPCDPC+VHCC+HWCA
Sbjct: 125 AIFHGVDPRTSFLIGEGLVFSWWLCATYTGIFRQGLQRKYHLKNSPCDPCMVHCCLHWCA 184

Query: 182 LCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNE 219
            CQE+RE    L++N  + MTV++PP +Q M+  ++ E
Sbjct: 185 NCQEHRERTGRLAENNAVPMTVVNPPPVQEMSMLEEVE 222

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BLAST of MELO3C022235T1 vs. Swiss-Prot
Match: PCR10_ARATH (Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana GN=PCR10 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.3e-16
Identity = 49/155 (31.61%), Postives = 76/155 (49.03%), Query Frame = 1


Query: 61  WTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           W++GIC C  D ++C  G+FCPC +FG+N E L     +   C+ H  C+   +      
Sbjct: 47  WSSGICACFDDMQSCCVGLFCPCYIFGKNAELLGSG-TFAGPCLTH--CISWALVNTICC 106

Query: 121 ALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
              +G     + L       + + CG     +R+SL+ KY+L+ +PC   + H   H CA
Sbjct: 107 FATNG-----ALLGLPGCFVSCYACG-----YRKSLRAKYNLQEAPCGDFVTHFFCHLCA 166

Query: 181 LCQENREMRNHLSDN--LTMQMTVIDPPALQAMNT 214
           +CQE RE+R   S +  L M+M + + P  Q M +
Sbjct: 167 ICQEYREIREQSSGSYPLDMKMAITNAPLAQTMES 188

[Close]

BLAST of MELO3C022235T1 vs. Swiss-Prot
Match: CNR5_MAIZE (Cell number regulator 5 OS=Zea mays GN=CNR5 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.5e-15
Identity = 51/164 (31.10%), Postives = 71/164 (43.29%), Query Frame = 1


Query: 43  EECGQPLPESYQPPADEDWTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNA 102
           EE     P+  Q P    W++GIC C  DP++C  G  CPC LFG+N + L        +
Sbjct: 29  EENHATRPKLNQDPT--QWSSGICACFDDPQSCCIGAICPCFLFGKNAQFLGSG-TLAGS 88

Query: 103 CVCHAMCVEGGMAVAAATALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHL 162
           C  H  C+  G+  +       G+      L       A + CG     +R +L+ KY+L
Sbjct: 89  CTTH--CMLWGLLTSLCCVFTGGL-----VLAVPGSAVACYACG-----YRSALRTKYNL 148

Query: 163 KNSPCDPCLVHCCMHWCALCQENREMRNHLSDNLTMQMTVIDPP 207
             +PC     H   H CA+CQE RE+R       +    V  PP
Sbjct: 149 PEAPCGDLTTHLFCHLCAICQEYREIRERTGSGSSPAPNVTPPP 177

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BLAST of MELO3C022235T1 vs. TrEMBL
Match: A0A0A0KDV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108550 PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 1.0e-137
Identity = 227/236 (96.19%), Postives = 231/236 (97.88%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED
Sbjct: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60

Query: 61  WTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGICGC QD  TCWRGM CPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT
Sbjct: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120

Query: 121 ALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           ALFHGIDPQTSFLISETL+FAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNEPPPSSSIVPSRELAITPI 237
           LCQENREMRNHLSDN+TMQMTVIDPPALQAMNTNDDNE PPSSS+VPS+ELAITPI
Sbjct: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNEFPPSSSVVPSQELAITPI 236

[Close]

BLAST of MELO3C022235T1 vs. TrEMBL
Match: A0A067K997_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14621 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.1e-110
Identity = 178/224 (79.46%), Postives = 200/224 (89.29%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MA+GS QSRYV+LT+DQ P EDITPGELNQPIQVPQLI+HRC ECGQPLPESY+PPADED
Sbjct: 1   MADGSTQSRYVKLTRDQTPAEDITPGELNQPIQVPQLIIHRCIECGQPLPESYEPPADED 60

Query: 61  WTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGICGC++D ++C  G FCPCVLFG NVETLR++IPW NACVCHAMCVEGG+A+AAAT
Sbjct: 61  WTTGICGCVEDAESCRTGFFCPCVLFGHNVETLRDDIPWSNACVCHAMCVEGGLALAAAT 120

Query: 121 ALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           A FHGIDP+TSFLI E L+FAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 AFFHGIDPKTSFLICEGLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNEPPPSSS 225
           LCQE+REMRNHLSDN  MQMTV++PP  Q MN+ +  E   S++
Sbjct: 181 LCQEHREMRNHLSDNAAMQMTVVNPPPAQQMNSGESQESAASTA 224

[Close]

BLAST of MELO3C022235T1 vs. TrEMBL
Match: B9RD43_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1609360 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.1e-110
Identity = 184/239 (76.99%), Postives = 206/239 (86.19%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MA+G+AQSRYV+LTKDQ P+EDITPGELNQPIQVPQLI+HRC ECGQ LPESY+PPADED
Sbjct: 1   MADGNAQSRYVKLTKDQSPVEDITPGELNQPIQVPQLIIHRCVECGQALPESYEPPADED 60

Query: 61  WTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGIC CL+D  +C  G+FCPCVLFG NVETLRE+IPW NACVCHAMCVEGG+A+AAAT
Sbjct: 61  WTTGICACLEDFDSCRTGLFCPCVLFGHNVETLREDIPWANACVCHAMCVEGGLALAAAT 120

Query: 121 ALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           A FHGIDP+TSFLI E L FAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 AFFHGIDPKTSFLICEGLFFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNEPPP---SSSIVPSRELAITPI 237
           LCQE+REM+NHLSDN  MQMTV++PP +Q MNT++  E  P   SS    +  L I P+
Sbjct: 181 LCQEHREMKNHLSDNSHMQMTVVNPPPVQQMNTDESQESAPDAQSSRNGENTNLEIQPV 239

[Close]

BLAST of MELO3C022235T1 vs. TrEMBL
Match: D7SLS5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02460 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 2.5e-107
Identity = 173/224 (77.23%), Postives = 196/224 (87.50%), Query Frame = 1


Query: 1   MAEGSAQS-RYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADE 60
           M+EG AQS RYV+L KDQ P+EDITPGELNQPI+VPQLIVHRC ECGQPLPESYQPPADE
Sbjct: 40  MSEGIAQSSRYVKLKKDQAPVEDITPGELNQPIEVPQLIVHRCNECGQPLPESYQPPADE 99

Query: 61  DWTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAA 120
           DWTTGICGC +D ++CW G+FCPCVLFG NVE LRE+IPW NACVCHA+CVEGGM +AAA
Sbjct: 100 DWTTGICGCAEDRESCWTGLFCPCVLFGHNVEQLREDIPWTNACVCHALCVEGGMTLAAA 159

Query: 121 TALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWC 180
           TALFHGIDP+TSFLI E L+F WWMCGIYTGLFRQSLQK+YHLKNSPCDPCLVHCCMHWC
Sbjct: 160 TALFHGIDPKTSFLICEGLLFTWWMCGIYTGLFRQSLQKQYHLKNSPCDPCLVHCCMHWC 219

Query: 181 ALCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNEPPPSS 224
           A+CQE+REM+ HLS N  M MT+++PP +Q M+   + E  PSS
Sbjct: 220 AICQEHREMKGHLSSNSAMPMTIVNPPPVQEMDAGGNQEAAPSS 263

[Close]

BLAST of MELO3C022235T1 vs. TrEMBL
Match: V4TE33_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021961mg PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.2e-104
Identity = 167/225 (74.22%), Postives = 195/225 (86.67%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPL-EDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADE 60
           MA+G  QSRYV+LT+DQ P+ EDITPG+LNQPIQVPQL+VHRC ECGQPLPESY+PP+DE
Sbjct: 1   MADGGQQSRYVKLTRDQAPVDEDITPGDLNQPIQVPQLVVHRCCECGQPLPESYEPPSDE 60

Query: 61  DWTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAA 120
           DWTTGICGC  D ++C  G  CPCVLFG NVETLR++IPW NACVCH MC+EGG+A+AAA
Sbjct: 61  DWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAA 120

Query: 121 TALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWC 180
           T LFHGIDP+TSFLI E L FAWWMCGIYTGL RQSLQKKYHLKN+PCDPCLVHCC+HWC
Sbjct: 121 TVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWC 180

Query: 181 ALCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNEPPPSSS 225
           ALCQE+REM+NHLS+N +  MT+++PP +Q MN  ++ EP PS S
Sbjct: 181 ALCQEHREMKNHLSENASTAMTIVNPPPVQEMNPGENKEPVPSES 225

[Close]

BLAST of MELO3C022235T1 vs. TAIR10
Match: AT2G45010.1 (AT2G45010.1 PLAC8 family protein)

HSP 1 Score: 346.7 bits (888), Expect = 1.2e-95
Identity = 155/230 (67.39%), Postives = 183/230 (79.57%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPLE-DITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADE 60
           MA+G+A SRYV+L K+Q P+E DITPGELNQPI VPQL V +C EC Q LPE+Y+PP+DE
Sbjct: 1   MADGNASSRYVKLRKEQAPVEEDITPGELNQPIDVPQLNVRKCHECMQVLPETYEPPSDE 60

Query: 61  DWTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAA 120
           +WTTGI GC +DP++C  G+FCPCVLFG N+E +REEIPW   CVCHA+CVEGGMA+AA 
Sbjct: 61  NWTTGIFGCAEDPESCRTGLFCPCVLFGRNIEAVREEIPWTQPCVCHAVCVEGGMALAAV 120

Query: 121 TALFHG-IDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHW 180
           TALF G IDPQT+ +I E L FAWWMCGIY+GLFRQ LQKKYHLKN+PCD C+VHCC+HW
Sbjct: 121 TALFSGYIDPQTTVVICEGLFFAWWMCGIYSGLFRQELQKKYHLKNAPCDHCMVHCCLHW 180

Query: 181 CALCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNEPPPSSSIVPS 229
           CALCQE+REM+NHLSD      T +DPP +Q MNT +  +   SSS  PS
Sbjct: 181 CALCQEHREMKNHLSDTEASSSTTMDPPPVQEMNTEERRDASSSSSSSPS 230

[Close]

BLAST of MELO3C022235T1 vs. TAIR10
Match: AT5G51400.1 (AT5G51400.1 PLAC8 family protein)

HSP 1 Score: 307.8 bits (787), Expect = 6.0e-84
Identity = 134/226 (59.29%), Postives = 171/226 (75.66%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           M++G A SRYV+LTK+Q P+++I PGELNQPI+V  L VH+C ECGQPLPE+++ PADE 
Sbjct: 2   MSDGGAPSRYVKLTKEQAPVDEIHPGELNQPIEVSHLAVHKCNECGQPLPENFEAPADEP 61

Query: 61  WTTGICGCLQDPKTCWRGMFCPCVLFGENVETLR-EEIPWQNACVCHAMCVEGGMAVAAA 120
           WTTGI GC +D  + W G+FCP VLFG   ETL  EE  W+ AC+CH++ VEGG+  A+ 
Sbjct: 62  WTTGIFGCTEDMNSFWLGLFCPSVLFGRVYETLSDEETSWKKACICHSIVVEGGLTAASM 121

Query: 121 TALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWC 180
            A   GIDP TS LI E L+F WWMCGIYTG  RQ+LQ+KYHL+N+PCDPC+VHCC+H+C
Sbjct: 122 LACVPGIDPHTSLLIWEGLLFVWWMCGIYTGNVRQTLQRKYHLQNAPCDPCMVHCCLHFC 181

Query: 181 ALCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNEPPPSSSI 226
           A+CQE+REM+N LSDN  M MTVI+PP +Q M+ + D +    +S+
Sbjct: 182 AVCQEHREMKNRLSDNFVMPMTVINPPPVQEMSASGDRDQHHHNSV 227

[Close]

BLAST of MELO3C022235T1 vs. TAIR10
Match: AT2G40935.1 (AT2G40935.1 PLAC8 family protein)

HSP 1 Score: 88.2 bits (217), Expect = 7.4e-18
Identity = 49/155 (31.61%), Postives = 76/155 (49.03%), Query Frame = 1


Query: 61  WTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           W++GIC C  D ++C  G+FCPC +FG+N E L     +   C+ H  C+   +      
Sbjct: 47  WSSGICACFDDMQSCCVGLFCPCYIFGKNAELLGSG-TFAGPCLTH--CISWALVNTICC 106

Query: 121 ALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
              +G     + L       + + CG     +R+SL+ KY+L+ +PC   + H   H CA
Sbjct: 107 FATNG-----ALLGLPGCFVSCYACG-----YRKSLRAKYNLQEAPCGDFVTHFFCHLCA 166

Query: 181 LCQENREMRNHLSDN--LTMQMTVIDPPALQAMNT 214
           +CQE RE+R   S +  L M+M + + P  Q M +
Sbjct: 167 ICQEYREIREQSSGSYPLDMKMAITNAPLAQTMES 188

[Close]

BLAST of MELO3C022235T1 vs. TAIR10
Match: AT3G18470.1 (AT3G18470.1 PLAC8 family protein)

HSP 1 Score: 60.1 bits (144), Expect = 2.2e-09
Identity = 39/159 (24.53%), Postives = 64/159 (40.25%), Query Frame = 1


Query: 58  DEDWTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVA 117
           ++ WT+G+  C++D +T     FCPCV FG   +   E                 G    
Sbjct: 2   EKQWTSGLFSCMEDSETACLTCFCPCVTFGRIADISDE-----------------GRTGC 61

Query: 118 AATALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMH 177
               +F+G+           +     +  +++  +R  ++ K+ L  SP   C+ H    
Sbjct: 62  GRCGVFYGL-----------ICCVVGLPCLFSCTYRTKIRSKFGLPESPTSDCVTHFFCE 121

Query: 178 WCALCQENREMRNHLSD-----NLTMQMTVIDPPALQAM 212
            CALCQE+RE++    D     +  MQ T+  P + Q M
Sbjct: 122 CCALCQEHRELKTRGLDPSIGWSGNMQRTMAPPMSQQMM 132

[Close]

BLAST of MELO3C022235T1 vs. NCBI nr
Match: gi|659120414|ref|XP_008460181.1| (PREDICTED: cell number regulator 6 [Cucumis melo])

HSP 1 Score: 515.0 bits (1325), Expect = 7.0e-143
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED
Sbjct: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60

Query: 61  WTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT
Sbjct: 61  WTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120

Query: 121 ALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           ALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 ALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNEPPPSSSIVPSRELAITPI 237
           LCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNEPPPSSSIVPSRELAITPI
Sbjct: 181 LCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNEPPPSSSIVPSRELAITPI 236

[Close]

BLAST of MELO3C022235T1 vs. NCBI nr
Match: gi|449445702|ref|XP_004140611.1| (PREDICTED: cell number regulator 6 [Cucumis sativus])

HSP 1 Score: 497.3 bits (1279), Expect = 1.5e-137
Identity = 227/236 (96.19%), Postives = 231/236 (97.88%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED
Sbjct: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60

Query: 61  WTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGICGC QD  TCWRGM CPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT
Sbjct: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120

Query: 121 ALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           ALFHGIDPQTSFLISETL+FAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNEPPPSSSIVPSRELAITPI 237
           LCQENREMRNHLSDN+TMQMTVIDPPALQAMNTNDDNE PPSSS+VPS+ELAITPI
Sbjct: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNEFPPSSSVVPSQELAITPI 236

[Close]

BLAST of MELO3C022235T1 vs. NCBI nr
Match: gi|1009140455|ref|XP_015887662.1| (PREDICTED: cell number regulator 6 [Ziziphus jujuba])

HSP 1 Score: 411.8 bits (1057), Expect = 8.3e-112
Identity = 181/220 (82.27%), Postives = 202/220 (91.82%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQ--GPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPAD 60
           MAEG+AQS+YV+LTKDQ   PLEDITPGELNQPI+VPQL+VHRC ECGQPLPESYQPPAD
Sbjct: 1   MAEGNAQSKYVKLTKDQDQSPLEDITPGELNQPIEVPQLVVHRCMECGQPLPESYQPPAD 60

Query: 61  EDWTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAA 120
           EDWTTGICGC +D  +CW G+FCPCVLFG NVETLR+EIPW NACVCHA+CVEGGMAVAA
Sbjct: 61  EDWTTGICGCTEDFDSCWTGLFCPCVLFGRNVETLRDEIPWTNACVCHAICVEGGMAVAA 120

Query: 121 ATALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHW 180
           ATALFHGIDP+TSFLI E+L FAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCC+HW
Sbjct: 121 ATALFHGIDPKTSFLICESLFFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCLHW 180

Query: 181 CALCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNE 219
           CALCQE+REMRNHLSDN +MQMTV++PP +Q MN+ +  +
Sbjct: 181 CALCQEHREMRNHLSDNASMQMTVVNPPPVQEMNSEESRD 220

[Close]

BLAST of MELO3C022235T1 vs. NCBI nr
Match: gi|802700360|ref|XP_012083691.1| (PREDICTED: cell number regulator 6 [Jatropha curcas])

HSP 1 Score: 407.5 bits (1046), Expect = 1.6e-110
Identity = 178/224 (79.46%), Postives = 200/224 (89.29%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MA+GS QSRYV+LT+DQ P EDITPGELNQPIQVPQLI+HRC ECGQPLPESY+PPADED
Sbjct: 1   MADGSTQSRYVKLTRDQTPAEDITPGELNQPIQVPQLIIHRCIECGQPLPESYEPPADED 60

Query: 61  WTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGICGC++D ++C  G FCPCVLFG NVETLR++IPW NACVCHAMCVEGG+A+AAAT
Sbjct: 61  WTTGICGCVEDAESCRTGFFCPCVLFGHNVETLRDDIPWSNACVCHAMCVEGGLALAAAT 120

Query: 121 ALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           A FHGIDP+TSFLI E L+FAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 AFFHGIDPKTSFLICEGLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNEPPPSSS 225
           LCQE+REMRNHLSDN  MQMTV++PP  Q MN+ +  E   S++
Sbjct: 181 LCQEHREMRNHLSDNAAMQMTVVNPPPAQQMNSGESQESAASTA 224

[Close]

BLAST of MELO3C022235T1 vs. NCBI nr
Match: gi|255541136|ref|XP_002511632.1| (PREDICTED: cell number regulator 6 isoform X3 [Ricinus communis])

HSP 1 Score: 407.5 bits (1046), Expect = 1.6e-110
Identity = 184/239 (76.99%), Postives = 206/239 (86.19%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MA+G+AQSRYV+LTKDQ P+EDITPGELNQPIQVPQLI+HRC ECGQ LPESY+PPADED
Sbjct: 1   MADGNAQSRYVKLTKDQSPVEDITPGELNQPIQVPQLIIHRCVECGQALPESYEPPADED 60

Query: 61  WTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGIC CL+D  +C  G+FCPCVLFG NVETLRE+IPW NACVCHAMCVEGG+A+AAAT
Sbjct: 61  WTTGICACLEDFDSCRTGLFCPCVLFGHNVETLREDIPWANACVCHAMCVEGGLALAAAT 120

Query: 121 ALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           A FHGIDP+TSFLI E L FAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 AFFHGIDPKTSFLICEGLFFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNEPPP---SSSIVPSRELAITPI 237
           LCQE+REM+NHLSDN  MQMTV++PP +Q MNT++  E  P   SS    +  L I P+
Sbjct: 181 LCQEHREMKNHLSDNSHMQMTVVNPPPVQQMNTDESQESAPDAQSSRNGENTNLEIQPV 239

The following BLAST results are available for this feature:

BLAST of MELO3C022235T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CNR6_MAIZE	1.4e-87	64.68	Cell number regulator 6 OS=Zea mays GN=CNR6 PE=2 SV=1	[more]
PCR10_ARATH	1.3e-16	31.61	Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana GN=PCR10 PE=2 SV=1	[more]
CNR5_MAIZE	2.5e-15	31.10	Cell number regulator 5 OS=Zea mays GN=CNR5 PE=2 SV=1	[more]

BLAST of MELO3C022235T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDV6_CUCSA	1.0e-137	96.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108550 PE=4 SV=1	[more]
A0A067K997_JATCU	1.1e-110	79.46	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14621 PE=4 SV=1	[more]
B9RD43_RICCO	1.1e-110	76.99	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1609360 PE=4 SV=1	[more]
D7SLS5_VITVI	2.5e-107	77.23	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02460 PE=4 SV=...	[more]
V4TE33_9ROSI	1.2e-104	74.22	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021961mg PE=4 SV=1	[more]

BLAST of MELO3C022235T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45010.1	1.2e-95	67.39	PLAC8 family protein	[more]
AT5G51400.1	6.0e-84	59.29	PLAC8 family protein	[more]
AT2G40935.1	7.4e-18	31.61	PLAC8 family protein	[more]
AT3G18470.1	2.2e-09	24.53	PLAC8 family protein	[more]

BLAST of MELO3C022235T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120414\|ref\|XP_008460181.1\|	7.0e-143	100.00	PREDICTED: cell number regulator 6 [Cucumis melo]	[more]
gi\|449445702\|ref\|XP_004140611.1\|	1.5e-137	96.19	PREDICTED: cell number regulator 6 [Cucumis sativus]	[more]
gi\|1009140455\|ref\|XP_015887662.1\|	8.3e-112	82.27	PREDICTED: cell number regulator 6 [Ziziphus jujuba]	[more]
gi\|802700360\|ref\|XP_012083691.1\|	1.6e-110	79.46	PREDICTED: cell number regulator 6 [Jatropha curcas]	[more]
gi\|255541136\|ref\|XP_002511632.1\|	1.6e-110	76.99	PREDICTED: cell number regulator 6 isoform X3 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR006461	PLAC_motif_containing

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C022235	MELO3C022235	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C022235T1	MELO3C022235T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C022235T1.cds4	MELO3C022235T1.cds4	CDS
MELO3C022235T1.cds3	MELO3C022235T1.cds3	CDS
MELO3C022235T1.cds2	MELO3C022235T1.cds2	CDS
MELO3C022235T1.cds1	MELO3C022235T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006461	PLAC8 motif-containing protein	PFAM	PF04749	PLAC8	coord: 61..187 score: 1.0
IPR006461	PLAC8 motif-containing protein	TIGRFAMs	TIGR01571	TIGR01571	coord: 60..189 score: 5.9
None	No IPR available	PANTHER	PTHR15907	FAMILY NOT NAMED	coord: 2..230 score: 6.8E
None	No IPR available	PANTHER	PTHR15907:SF35	GENE1000 PROTEIN-RELATED	coord: 2..230 score: 6.8E