MELO3C021567T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C021567T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	DnaJ domain containing protein
Location	chr9 : 3830238 .. 3831415 (+)
Sequence length	393

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGATACTCTTGGCCGTGCACGAGTAAAGGTTCAATATGGAGACAACGATCAAAAAATTCAGGTAAATGAGAGAAAAGGAGAGTAAATCAGTAGAGATAAAACTCAAAAGAACACCAAACAACGCTGTTTTTGTTTCATTCTTATAGGTTTCAGTAGAATCATGTCCTGTGAATTGCATATATTGGGTAGAAAAGGAGGAACTGGAAGTGTTAGAGTATTTGATGCAGCCACTGCCCAAGAAAGGATATGGGGTGTTTGGAGGTGGCTGGGAAATTCCAGCCAATGTGTTTATGGCGGCCAAGGCCTTCACCAAGCAGCTGAAACGGCAAGAACAGGACAAAAAATATGGTGAGTTTTCCTTTGGGTTCATTGTGTTTTCAACCAAGTATTTGATATAATTAAAGGGTAGATTCAAATTTATTATTGGTAGTTTATAGAAATGAATTTAGAATTTAGTAACTATGTTTAATAAACCTCTAAAAATAGTTCATATGGTCTGATAATTGTCTCATAAATAGCTCTACTCAGCAGGAGAGTTTTATTAAATTGTAAAGACTAAATTCAAATTATAAGTTATAAGAACCAAATTTATATTTTAACCGATAATTAGGACTCAGCTCGAAAACTATTTTGTTTCTTGTCTTTGTTTTTTAAAGTCCAAGTTTCTAAACATTATTTTCACCTTCGATTTCTTTATTTGATATATACTTTTCATTAATGGTTAAAAAATCTAAAATCAAATTTTGAAAAACTAAAAAAAAATAGTAGCAATACAAAACTTGTTTTTGTCTTTAAGCTTTGCTAAGAATTTAACCATAATACTCTCAAAAAATATGTAAATCAAAATAAGAAATGAAAAGAAACAAAGCTTAAATTTTAAAAACAAAAAACAAAATAGTTACAAAACAAGGACTAAGCTTTGCACGGTTCTAATTGATATCAAAATGTCATTTCTTCAACTAAAATTAATCTCTAATTGTTGTGTCAAATTAAGTTAATAGTTATAATACCCTATCATTGATTGTTGTTTAATTATACATACATACAGGAGCGGAAACTGTGGAAGAAACTCCAGCTCAAGCTGAGGCTCGAGCTAATGCCACCATGAAAATACAAAGGGAGAAGTTTTATGGAGTTTGGAATTGGGTAAAGCAAGTTTTTAGTGATAGGTAG

mRNA sequence

ATGGATGATACTCTTGGCCGTGCACGAGTAAAGGTTCAATATGGAGACAACGATCAAAAAATTCAGGTTTCAGTAGAATCATGTCCTGTGAATTGCATATATTGGGTAGAAAAGGAGGAACTGGAAGTGTTAGAGTATTTGATGCAGCCACTGCCCAAGAAAGGATATGGGGTGTTTGGAGGTGGCTGGGAAATTCCAGCCAATGTGTTTATGGCGGCCAAGGCCTTCACCAAGCAGCTGAAACGGCAAGAACAGGACAAAAAATATGGAGCGGAAACTGTGGAAGAAACTCCAGCTCAAGCTGAGGCTCGAGCTAATGCCACCATGAAAATACAAAGGGAGAAGTTTTATGGAGTTTGGAATTGGGTAAAGCAAGTTTTTAGTGATAGGTAG

Coding sequence (CDS)

ATGGATGATACTCTTGGCCGTGCACGAGTAAAGGTTCAATATGGAGACAACGATCAAAAAATTCAGGTTTCAGTAGAATCATGTCCTGTGAATTGCATATATTGGGTAGAAAAGGAGGAACTGGAAGTGTTAGAGTATTTGATGCAGCCACTGCCCAAGAAAGGATATGGGGTGTTTGGAGGTGGCTGGGAAATTCCAGCCAATGTGTTTATGGCGGCCAAGGCCTTCACCAAGCAGCTGAAACGGCAAGAACAGGACAAAAAATATGGAGCGGAAACTGTGGAAGAAACTCCAGCTCAAGCTGAGGCTCGAGCTAATGCCACCATGAAAATACAAAGGGAGAAGTTTTATGGAGTTTGGAATTGGGTAAAGCAAGTTTTTAGTGATAGGTAG

Protein sequence

MDDTLGRARVKVQYGDNDQKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFGGGWEIPANVFMAAKAFTKQLKRQEQDKKYGAETVEETPAQAEARANATMKIQREKFYGVWNWVKQVFSDR*

Homology

[Close]

BLAST of MELO3C021567T1 vs. TrEMBL
Match: A0A0A0KUF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G523160 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 2.0e-66
Identity = 124/130 (95.38%), Postives = 128/130 (98.46%), Query Frame = 1


Query: 1   MDDTLGRARVKVQYGDNDQKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG 60
           MD+TLGRARVKVQYGDND+KIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG
Sbjct: 172 MDETLGRARVKVQYGDNDKKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG 231

Query: 61  GGWEIPANVFMAAKAFTKQLKRQEQDKKYGAETVEETPAQAEARANATMKIQREKFYGVW 120
           GGWEIPANVFMAAKAFTKQL+RQEQD KYGAETV ETPAQAEARANATMKIQREKF+GVW
Sbjct: 232 GGWEIPANVFMAAKAFTKQLERQEQDTKYGAETVGETPAQAEARANATMKIQREKFHGVW 291

Query: 121 NWVKQVFSDR 131
           NWVKQVFSDR
Sbjct: 292 NWVKQVFSDR 301

[Close]

BLAST of MELO3C021567T1 vs. TrEMBL
Match: D7T0C2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0177g00280 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 4.4e-45
Identity = 90/128 (70.31%), Postives = 111/128 (86.72%), Query Frame = 1


Query: 1   MDDTLGRARVKVQYGDNDQKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG 60
           MDD LG ARVKVQYGD+D+KI+VSV+SCPVNCI+WV++EEL +LE+L+QP PK+GYGVFG
Sbjct: 166 MDDALGCARVKVQYGDDDKKIEVSVDSCPVNCIHWVDREELAILEFLIQPQPKEGYGVFG 225

Query: 61  GGWEIPANVFMAAKAFTKQLKRQ-EQDKKYGAETV-EETPAQAEARANATMKIQREKFYG 120
           GGWE PANVFMAAKAF KQLK+Q +  ++  + TV EETPAQAEARANA+MKI+ E+   
Sbjct: 226 GGWERPANVFMAAKAFNKQLKQQADHHQRNASRTVEEETPAQAEARANASMKIKMERLSR 285

Query: 121 VWNWVKQV 127
           +WNWVK+V
Sbjct: 286 IWNWVKEV 293

[Close]

BLAST of MELO3C021567T1 vs. TrEMBL
Match: A0A151T8G3_CAJCA (Chaperone protein dnaJ OS=Cajanus cajan GN=KK1_017870 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 4.1e-43
Identity = 89/127 (70.08%), Postives = 102/127 (80.31%), Query Frame = 1


Query: 1   MDDTLGRARVKVQYGDNDQKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG 60
           MD+  G ARVKVQYGDNDQ I+VSVESCPVNCI+WVE+EEL VLE+L+QP PK GYGVFG
Sbjct: 169 MDEAHGCARVKVQYGDNDQSIEVSVESCPVNCIHWVEREELAVLEFLIQPQPKDGYGVFG 228

Query: 61  GGWEIPANVFMAAKAFTKQLKRQ--EQDKKYGAETVEETPAQAEARANATMKIQREKFYG 120
           GGWE PANVF AAK+F KQLKR+   +  +    TVEE+PAQAEARA A MKI+ E F  
Sbjct: 229 GGWEKPANVFTAAKSFNKQLKRKAATRPNQSPGGTVEESPAQAEARARADMKIKMESFLK 288

Query: 121 VWNWVKQ 126
           +WNWVKQ
Sbjct: 289 IWNWVKQ 295

[Close]

BLAST of MELO3C021567T1 vs. TrEMBL
Match: A0A0B2R8G2_GLYSO (Chaperone protein DnaJ OS=Glycine soja GN=glysoja_048166 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.0e-42
Identity = 89/128 (69.53%), Postives = 102/128 (79.69%), Query Frame = 1


Query: 1   MDDTLGRARVKVQYGDNDQKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG 60
           MD+T G ARVKVQYGDNDQ I+VSVESCPVNCI+WVE EEL VLE+L+QP PK GYGVFG
Sbjct: 170 MDETQGSARVKVQYGDNDQSIEVSVESCPVNCIHWVETEELPVLEFLIQPQPKDGYGVFG 229

Query: 61  GGWEIPANVFMAAKAFTKQLKRQ---EQDKKYGAETVEETPAQAEARANATMKIQREKFY 120
           GGWE PANVF AAK+F KQLKR+     D+  G  T EE+PAQAEA+A A MKI+ E F 
Sbjct: 230 GGWERPANVFTAAKSFNKQLKRKSTIRHDQSPGG-TFEESPAQAEAQARADMKIKMEGFL 289

Query: 121 GVWNWVKQ 126
            +WNWVK+
Sbjct: 290 KIWNWVKE 296

[Close]

BLAST of MELO3C021567T1 vs. TrEMBL
Match: A0A0R0EVG5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G063100 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.0e-42
Identity = 89/128 (69.53%), Postives = 102/128 (79.69%), Query Frame = 1


Query: 1   MDDTLGRARVKVQYGDNDQKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG 60
           MD+T G ARVKVQYGDNDQ I+VSVESCPVNCI+WVE EEL VLE+L+QP PK GYGVFG
Sbjct: 170 MDETQGSARVKVQYGDNDQSIEVSVESCPVNCIHWVETEELPVLEFLIQPQPKDGYGVFG 229

Query: 61  GGWEIPANVFMAAKAFTKQLKRQ---EQDKKYGAETVEETPAQAEARANATMKIQREKFY 120
           GGWE PANVF AAK+F KQLKR+     D+  G  T EE+PAQAEA+A A MKI+ E F 
Sbjct: 230 GGWERPANVFTAAKSFNKQLKRKSTIRHDQSPGG-TFEESPAQAEAQARADMKIKMEGFL 289

Query: 121 GVWNWVKQ 126
            +WNWVK+
Sbjct: 290 KIWNWVKE 296

[Close]

BLAST of MELO3C021567T1 vs. TAIR10
Match: AT5G23240.1 (AT5G23240.1 DNAJ heat shock N-terminal domain-containing protein)

HSP 1 Score: 62.4 bits (150), Expect = 2.4e-10
Identity = 44/125 (35.20%), Postives = 64/125 (51.20%), Query Frame = 1


Query: 1   MDDTLGRARVKVQYGDNDQKIQVSVESCPVNCIYWVEKEELEVLEYLM--QPLPKKGYGV 60
           ++   GRARV  Q+ D + KI+ ++E+CPV+CI  VE+ +L  LE+LM  QP      GV
Sbjct: 164 IETAYGRARVVAQWADPESKIKEAIEACPVDCISMVERSDLAPLEFLMSKQPRGNVRIGV 223

Query: 61  FGGGWEIPANVFMAAKAFTKQLKRQEQDKKYGAETVEETPAQAEARANATMKIQREKFYG 120
                E  +NVF+  K F      QE+  K  + T +ET +Q E + +A      E    
Sbjct: 224 GNTVGERVSNVFVDVKKF------QERYAKAMSRTTKET-SQREVQISAV-----EAIRS 276

Query: 121 VWNWV 124
           + NW+
Sbjct: 284 ISNWL 276

[Close]

BLAST of MELO3C021567T1 vs. NCBI nr
Match: gi|659117797|ref|XP_008458792.1| (PREDICTED: uncharacterized protein LOC103498094 isoform X2 [Cucumis melo])

HSP 1 Score: 271.2 bits (692), Expect = 9.7e-70
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1


Query: 1   MDDTLGRARVKVQYGDNDQKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG 60
           MDDTLGRARVKVQYGDNDQKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG
Sbjct: 209 MDDTLGRARVKVQYGDNDQKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG 268

Query: 61  GGWEIPANVFMAAKAFTKQLKRQEQDKKYGAETVEETPAQAEARANATMKIQREKFYGVW 120
           GGWEIPANVFMAAKAFTKQLKRQEQDKKYGAETVEETPAQAEARANATMKIQREKFYGVW
Sbjct: 269 GGWEIPANVFMAAKAFTKQLKRQEQDKKYGAETVEETPAQAEARANATMKIQREKFYGVW 328

Query: 121 NWVKQVFSDR 131
           NWVKQVFSDR
Sbjct: 329 NWVKQVFSDR 338

[Close]

BLAST of MELO3C021567T1 vs. NCBI nr
Match: gi|659117799|ref|XP_008458794.1| (PREDICTED: uncharacterized J domain-containing protein C4H3.01-like isoform X3 [Cucumis melo])

HSP 1 Score: 271.2 bits (692), Expect = 9.7e-70
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1


Query: 1   MDDTLGRARVKVQYGDNDQKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG 60
           MDDTLGRARVKVQYGDNDQKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG
Sbjct: 116 MDDTLGRARVKVQYGDNDQKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG 175

Query: 61  GGWEIPANVFMAAKAFTKQLKRQEQDKKYGAETVEETPAQAEARANATMKIQREKFYGVW 120
           GGWEIPANVFMAAKAFTKQLKRQEQDKKYGAETVEETPAQAEARANATMKIQREKFYGVW
Sbjct: 176 GGWEIPANVFMAAKAFTKQLKRQEQDKKYGAETVEETPAQAEARANATMKIQREKFYGVW 235

Query: 121 NWVKQVFSDR 131
           NWVKQVFSDR
Sbjct: 236 NWVKQVFSDR 245

[Close]

BLAST of MELO3C021567T1 vs. NCBI nr
Match: gi|659117795|ref|XP_008458791.1| (PREDICTED: uncharacterized protein LOC103498094 isoform X1 [Cucumis melo])

HSP 1 Score: 271.2 bits (692), Expect = 9.7e-70
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1


Query: 1   MDDTLGRARVKVQYGDNDQKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG 60
           MDDTLGRARVKVQYGDNDQKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG
Sbjct: 214 MDDTLGRARVKVQYGDNDQKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG 273

Query: 61  GGWEIPANVFMAAKAFTKQLKRQEQDKKYGAETVEETPAQAEARANATMKIQREKFYGVW 120
           GGWEIPANVFMAAKAFTKQLKRQEQDKKYGAETVEETPAQAEARANATMKIQREKFYGVW
Sbjct: 274 GGWEIPANVFMAAKAFTKQLKRQEQDKKYGAETVEETPAQAEARANATMKIQREKFYGVW 333

Query: 121 NWVKQVFSDR 131
           NWVKQVFSDR
Sbjct: 334 NWVKQVFSDR 343

[Close]

BLAST of MELO3C021567T1 vs. NCBI nr
Match: gi|449450080|ref|XP_004142792.1| (PREDICTED: uncharacterized protein LOC101222804 [Cucumis sativus])

HSP 1 Score: 259.6 bits (662), Expect = 2.9e-66
Identity = 124/130 (95.38%), Postives = 128/130 (98.46%), Query Frame = 1


Query: 1   MDDTLGRARVKVQYGDNDQKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG 60
           MD+TLGRARVKVQYGDND+KIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG
Sbjct: 172 MDETLGRARVKVQYGDNDKKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG 231

Query: 61  GGWEIPANVFMAAKAFTKQLKRQEQDKKYGAETVEETPAQAEARANATMKIQREKFYGVW 120
           GGWEIPANVFMAAKAFTKQL+RQEQD KYGAETV ETPAQAEARANATMKIQREKF+GVW
Sbjct: 232 GGWEIPANVFMAAKAFTKQLERQEQDTKYGAETVGETPAQAEARANATMKIQREKFHGVW 291

Query: 121 NWVKQVFSDR 131
           NWVKQVFSDR
Sbjct: 292 NWVKQVFSDR 301

[Close]

BLAST of MELO3C021567T1 vs. NCBI nr
Match: gi|359494012|ref|XP_003634709.1| (PREDICTED: uncharacterized protein LOC100854700 [Vitis vinifera])

HSP 1 Score: 188.7 bits (478), Expect = 6.3e-45
Identity = 90/128 (70.31%), Postives = 111/128 (86.72%), Query Frame = 1


Query: 1   MDDTLGRARVKVQYGDNDQKIQVSVESCPVNCIYWVEKEELEVLEYLMQPLPKKGYGVFG 60
           MDD LG ARVKVQYGD+D+KI+VSV+SCPVNCI+WV++EEL +LE+L+QP PK+GYGVFG
Sbjct: 166 MDDALGCARVKVQYGDDDKKIEVSVDSCPVNCIHWVDREELAILEFLIQPQPKEGYGVFG 225

Query: 61  GGWEIPANVFMAAKAFTKQLKRQ-EQDKKYGAETV-EETPAQAEARANATMKIQREKFYG 120
           GGWE PANVFMAAKAF KQLK+Q +  ++  + TV EETPAQAEARANA+MKI+ E+   
Sbjct: 226 GGWERPANVFMAAKAFNKQLKQQADHHQRNASRTVEEETPAQAEARANASMKIKMERLSR 285

Query: 121 VWNWVKQV 127
           +WNWVK+V
Sbjct: 286 IWNWVKEV 293

The following BLAST results are available for this feature:

BLAST of MELO3C021567T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUF2_CUCSA	2.0e-66	95.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G523160 PE=4 SV=1	[more]
D7T0C2_VITVI	4.4e-45	70.31	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0177g00280 PE=4 SV=...	[more]
A0A151T8G3_CAJCA	4.1e-43	70.08	Chaperone protein dnaJ OS=Cajanus cajan GN=KK1_017870 PE=4 SV=1	[more]
A0A0B2R8G2_GLYSO	2.0e-42	69.53	Chaperone protein DnaJ OS=Glycine soja GN=glysoja_048166 PE=4 SV=1	[more]
A0A0R0EVG5_SOYBN	2.0e-42	69.53	Uncharacterized protein OS=Glycine max GN=GLYMA_19G063100 PE=4 SV=1	[more]

BLAST of MELO3C021567T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23240.1	2.4e-10	35.20	DNAJ heat shock N-terminal domain-containing protein	[more]

BLAST of MELO3C021567T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117797\|ref\|XP_008458792.1\|	9.7e-70	100.00	PREDICTED: uncharacterized protein LOC103498094 isoform X2 [Cucumis melo]	[more]
gi\|659117799\|ref\|XP_008458794.1\|	9.7e-70	100.00	PREDICTED: uncharacterized J domain-containing protein C4H3.01-like isoform X3 [...	[more]
gi\|659117795\|ref\|XP_008458791.1\|	9.7e-70	100.00	PREDICTED: uncharacterized protein LOC103498094 isoform X1 [Cucumis melo]	[more]
gi\|449450080\|ref\|XP_004142792.1\|	2.9e-66	95.38	PREDICTED: uncharacterized protein LOC101222804 [Cucumis sativus]	[more]
gi\|359494012\|ref\|XP_003634709.1\|	6.3e-45	70.31	PREDICTED: uncharacterized protein LOC100854700 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0051536	iron-sulfur cluster binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C021567	MELO3C021567	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C021567T1	MELO3C021567T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C021567T1.cds1	MELO3C021567T1.cds1	CDS
MELO3C021567T1.cds2	MELO3C021567T1.cds2	CDS
MELO3C021567T1.cds3	MELO3C021567T1.cds3	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.30.70.20		coord: 1..37 score: 5.