MELO3C021114.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTCTTTCGGTACTTATTCATCTCATCTCTTTGTATTTCTAGTTATACCCATTTCCCACCTCACCAAAACCTCCATTCCAACTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCAATGGCTGTCGACGACGACGACCAGGGTGGGGAGGAGTATTTGTTCAAGATTGTTCTTATTGGCGACTCTGCCGTGGGCAAATCTAACCTCCTTTCGCGGTTTGCTCGGAATGAGTTTGATAACAACTCTAAGGCTACTATCGGCGTTGAGTTTCAGACCCAAGTGGTGGAAATTGACGGCAAAGAGGTTAAGGCTCAGATCTGGGACACAGCTGGCCAGGAACGGTTTAGGGCTGTCACTTCGGCTTACTATCGTGGTGCTGTTGGGGCGCTTATTGTCTACGATATTAGCCGTCGGACCACCTTTGACAGTGCCAAGCGGTGGCTTGACGAGCTCGGCGGTACGTTCTCTTCGAATCTTTATGGTTATTTTTACTCTTCTGTTTGTTTGTAGAGGCAGTTTGTGGAAGTGAATCGTATTTCTTTCTTGGGTATATTAGAATCTCCTATTGGTTTGGTTTGTTGATTCTTTGATTTGTAAGAAATATGGGAATGATAGAAAGAAAGAAAATTCAGTGTTGTTGGTTATTCTGCAATATGCCAATATCTGGTTGGAAAGCGGGGATGAATGATTTGCTTTCGTTCTTACTTTTTGGAGTTCCTTCAGTGAGTAATTTGTAATGAACTAAAGAATAGATTGGTGGTGAGGTTTGCCAAATTGATAACAAAAACAGGATAGTTTAGCCCTGTGTAATGGTTCGAAATAGATATGAAAAGAAAAGCTGGCTAAAGACCCTATTTCTTATTAGCTCATGAGAGAGTCAATTTAGGAGCAACTACCTTAGTCTTCGGGCATTTGGCACTAACGAATGAGAATGGATTTGAACTCAGTTTATGGCTGGCATTTGAAGTTATTAAGGAATAGCTGCTTAGTGTTGACTAAGTGTTGGGCACTATTGAATCAAGGACCTTAGAACCTTTTTCTTCAAGTTTTGAATAGATTCTTTCGAGCTTTCTCATCCTTCCAGGGTTGAAAGGGAAGAAATGACAAATCTTTTTGAGTCTCTCCATATTTTTTCTATGGCATAGTATGCCCTCGCTCGTTCATCCGTTCCTGTAGTATTTTGTGAGTTTGCTAGTTTTGTTTGGAACTTATTCTTTTAGACGTTTGGTATTTTGTATGCTTACCACATGGACACTAGTGTTTTGATCGAGGAGTTCCTCCTGAATTTGCTGATTCGCTTCTTATGTTGGGAGTTGATGCAATGATGAGGTTTTTAGATGGGTGAAAAGAGACCCTAACGAGGTTTAACCTTTTGTTTGCTCTCATGTTTCTTTTTTAGCTTCAATTTCAAAGACCTTTAGTTACTATTTGCCTAGCTGGAGTCTCTTCCTCCAAAGGGAGGTTCCTTTCTTATGGACTTGTTCTTTTGTATGGCATTGTATTATTTCATTTTTTTTTTCTCGGTGAAAGTTGTTTCCAACAAAGAAAACAGAAAAATTCAATAGTATGGTATTTCATTATAAAGATGTCGCTCTGACTCATCTTCCACTCTCTATGATGTGTTACATTTACATCTCCATATCTAAGATAGGTCAATAAAGCAAAGCAAAAGCTGATGAAGTGGTTGAATCTCATATTTCATTGTCATTGTCATTTGCATTTTATAAGATCATAAACTGAAGAAGCTTACTCTGCCCAAAACCATTGCAGTTCATTGCGATACAGCAACAGTGAGGATGTTGGTAGGGAACAAGTGTGATTTGGAGAACATCAGAGATGTGAGTGTGGAGGAAGGTAAGAATCTAGCAGAAGAAGAAGGACTGTTCTTCATGGAGACCTCTGCTCTTGATTCCACCAATGTAAGAACAGCCTTTGAGCTTGTTATTAGGGAGATTTTCAACAACGTCAGCAGGAAAGTCCTCAACTCTGATTCTTACAAGGCTGAGCTTTCTGAAAATCGAGTAAGTTTGGCTGATGGAGGAGCCTCTTCCAAAAAAGGCTTCTCTTGTTGTTCTCAATGAGTTTCATGTTCTCTCTCTCAGTAGTAAATTTTTTGGAGTTTTAAAAGTTTAAAAGTTGTACCCGATATAATAGGTCTCTAAAATTTTAATTTCGAGTTAATTGTTCCAAACGTTCAATTTTCAATTTTGTGGCTAATAGACACGATTGAAATTTGAAGTCTATTTCCAGGGGCATAAAACACAGCCTCAGGGAGTTCCTGATTTAAATTTGTAATTTTACCCTCGTTTTGGTTCTACAAGATATGAGAAATGAGTATTGTTCCATTTCCTTATAAGGCTTTATAAATATTGGTTAAAATACTATCGAGTAGTATTAGTTTAGATGTTTTAAGATTATGGCTCTTAGTCTCTACTTTTAATAAATCATATTTAGTCC CGTCTTTCGGTACTTATTCATCTCATCTCTTTGTATTTCTAGTTATACCCATTTCCCACCTCACCAAAACCTCCATTCCAACTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCAATGGCTGTCGACGACGACGACCAGGGTGGGGAGGAGTATTTGTTCAAGATTGTTCTTATTGGCGACTCTGCCGTGGGCAAATCTAACCTCCTTTCGCGGTTTGCTCGGAATGAGTTTGATAACAACTCTAAGGCTACTATCGGCGTTGAGTTTCAGACCCAAGTGGTGGAAATTGACGGCAAAGAGGTTAAGGCTCAGATCTGGGACACAGCTGGCCAGGAACGGTTTAGGGCTGTCACTTCGGCTTACTATCGTGGTGCTGTTGGGGCGCTTATTGTCTACGATATTAGCCGTCGGACCACCTTTGACAGTGCCAAGCGGTGGCTTGACGAGCTCGGCGATCATAAACTGAAGAAGCTTACTCTGCCCAAAACCATTGCAGTTCATTGCGATACAGCAACAGTGAGGATGTTGGTAGGGAACAAGTGTGATTTGGAGAACATCAGAGATGTGAGTGTGGAGGAAGGTAAGAATCTAGCAGAAGAAGAAGGACTGTTCTTCATGGAGACCTCTGCTCTTGATTCCACCAATGTAAGAACAGCCTTTGAGCTTGTTATTAGGGAGATTTTCAACAACGTCAGCAGGAAAGTCCTCAACTCTGATTCTTACAAGGCTGAGCTTTCTGAAAATCGAGTAAGTTTGGCTGATGGAGGAGCCTCTTCCAAAAAAGGCTTCTCTTGTTGTTCTCAATGAGTTTCATGTTCTCTCTCTCAGTAGTAAATTTTTTGGAGTTTTAAAAGTTTAAAAGTTGTACCCGATATAATAGGTCTCTAAAATTTTAATTTCGAGTTAATTGTTCCAAACGTTCAATTTTCAATTTTGTGGCTAATAGACACGATTGAAATTTGAAGTCTATTTCCAGGGGCATAAAACACAGCCTCAGGGAGTTCCTGATTTAAATTTGTAATTTTACCCTCGTTTTGGTTCTACAAGATATGAGAAATGAGTATTGTTCCATTTCCTTATAAGGCTTTATAAATATTGGTTAAAATACTATCGAGTAGTATTAGTTTAGATGTTTTAAGATTATGGCTCTTAGTCTCTACTTTTAATAAATCATATTTAGTCC ATGGCTGTCGACGACGACGACCAGGGTGGGGAGGAGTATTTGTTCAAGATTGTTCTTATTGGCGACTCTGCCGTGGGCAAATCTAACCTCCTTTCGCGGTTTGCTCGGAATGAGTTTGATAACAACTCTAAGGCTACTATCGGCGTTGAGTTTCAGACCCAAGTGGTGGAAATTGACGGCAAAGAGGTTAAGGCTCAGATCTGGGACACAGCTGGCCAGGAACGGTTTAGGGCTGTCACTTCGGCTTACTATCGTGGTGCTGTTGGGGCGCTTATTGTCTACGATATTAGCCGTCGGACCACCTTTGACAGTGCCAAGCGGTGGCTTGACGAGCTCGGCGATCATAAACTGAAGAAGCTTACTCTGCCCAAAACCATTGCAGTTCATTGCGATACAGCAACAGTGAGGATGTTGGTAGGGAACAAGTGTGATTTGGAGAACATCAGAGATGTGAGTGTGGAGGAAGGTAAGAATCTAGCAGAAGAAGAAGGACTGTTCTTCATGGAGACCTCTGCTCTTGATTCCACCAATGTAAGAACAGCCTTTGAGCTTGTTATTAGGGAGATTTTCAACAACGTCAGCAGGAAAGTCCTCAACTCTGATTCTTACAAGGCTGAGCTTTCTGAAAATCGAGTAAGTTTGGCTGATGGAGGAGCCTCTTCCAAAAAAGGCTTCTCTTGTTGTTCTCAATGA MAVDDDDQGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSAKRWLDELGDHKLKKLTLPKTIAVHCDTATVRMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIFNNVSRKVLNSDSYKAELSENRVSLADGGASSKKGFSCCSQ
BLAST of MELO3C021114.2.1 vs. NCBI nr
Match: XP_008458081.1 (PREDICTED: ras-related protein RABA5b [Cucumis melo]) HSP 1 Score: 312.0 bits (798), Expect = 1.7e-81 Identity = 216/230 (93.91%), Postives = 216/230 (93.91%), Query Frame = 0
BLAST of MELO3C021114.2.1 vs. NCBI nr
Match: XP_004149322.1 (PREDICTED: ras-related protein RABA5e [Cucumis sativus] >KGN44658.1 RAB11G [Cucumis sativus]) HSP 1 Score: 301.2 bits (770), Expect = 3.0e-78 Identity = 166/226 (73.45%), Postives = 168/226 (74.34%), Query Frame = 0
BLAST of MELO3C021114.2.1 vs. NCBI nr
Match: XP_023004189.1 (ras-related protein RABA5b-like [Cucurbita maxima]) HSP 1 Score: 292.0 bits (746), Expect = 1.8e-75 Identity = 159/226 (70.35%), Postives = 162/226 (71.68%), Query Frame = 0
BLAST of MELO3C021114.2.1 vs. NCBI nr
Match: XP_022959843.1 (ras-related protein RABA5b-like [Cucurbita moschata] >XP_023514429.1 ras-related protein RABA5b-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 289.7 bits (740), Expect = 9.0e-75 Identity = 158/226 (69.91%), Postives = 161/226 (71.24%), Query Frame = 0
BLAST of MELO3C021114.2.1 vs. NCBI nr
Match: XP_023549172.1 (ras-related protein RABA5b-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 285.0 bits (728), Expect = 2.2e-73 Identity = 155/226 (68.58%), Postives = 160/226 (70.80%), Query Frame = 0
BLAST of MELO3C021114.2.1 vs. TAIR10
Match: AT1G05810.1 (RAB GTPase homolog A5E) HSP 1 Score: 233.4 bits (594), Expect = 1.4e-61 Identity = 134/231 (58.01%), Postives = 148/231 (64.07%), Query Frame = 0
BLAST of MELO3C021114.2.1 vs. TAIR10
Match: AT3G07410.1 (RAB GTPase homolog A5B) HSP 1 Score: 231.5 bits (589), Expect = 5.3e-61 Identity = 133/228 (58.33%), Postives = 144/228 (63.16%), Query Frame = 0
BLAST of MELO3C021114.2.1 vs. TAIR10
Match: AT2G31680.1 (RAB GTPase homolog A5D) HSP 1 Score: 226.1 bits (575), Expect = 2.2e-59 Identity = 133/231 (57.58%), Postives = 147/231 (63.64%), Query Frame = 0
BLAST of MELO3C021114.2.1 vs. TAIR10
Match: AT2G43130.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein) HSP 1 Score: 224.6 bits (571), Expect = 6.4e-59 Identity = 124/228 (54.39%), Postives = 142/228 (62.28%), Query Frame = 0
BLAST of MELO3C021114.2.1 vs. TAIR10
Match: AT5G47520.1 (RAB GTPase homolog A5A) HSP 1 Score: 197.2 bits (500), Expect = 1.1e-50 Identity = 104/157 (66.24%), Postives = 120/157 (76.43%), Query Frame = 0
BLAST of MELO3C021114.2.1 vs. Swiss-Prot
Match: sp|Q9SRS5|RAA5B_ARATH (Ras-related protein RABA5b OS=Arabidopsis thaliana OX=3702 GN=RABA5B PE=1 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 9.5e-60 Identity = 133/228 (58.33%), Postives = 144/228 (63.16%), Query Frame = 0
BLAST of MELO3C021114.2.1 vs. Swiss-Prot
Match: sp|P19892|RAA5E_ARATH (Ras-related protein RABA5e OS=Arabidopsis thaliana OX=3702 GN=RABA5E PE=2 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 9.5e-60 Identity = 133/230 (57.83%), Postives = 147/230 (63.91%), Query Frame = 0
BLAST of MELO3C021114.2.1 vs. Swiss-Prot
Match: sp|Q9SIP0|RAA5D_ARATH (Ras-related protein RABA5d OS=Arabidopsis thaliana OX=3702 GN=RABA5D PE=1 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 4.0e-58 Identity = 133/231 (57.58%), Postives = 147/231 (63.64%), Query Frame = 0
BLAST of MELO3C021114.2.1 vs. Swiss-Prot
Match: sp|P28187|RAA5C_ARATH (Ras-related protein RABA5c OS=Arabidopsis thaliana OX=3702 GN=RABA5C PE=1 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 1.2e-57 Identity = 124/228 (54.39%), Postives = 142/228 (62.28%), Query Frame = 0
BLAST of MELO3C021114.2.1 vs. Swiss-Prot
Match: sp|Q9FGK5|RAA5A_ARATH (Ras-related protein RABA5a OS=Arabidopsis thaliana OX=3702 GN=RABA5A PE=1 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 2.0e-49 Identity = 104/157 (66.24%), Postives = 120/157 (76.43%), Query Frame = 0
BLAST of MELO3C021114.2.1 vs. TrEMBL
Match: tr|A0A1S3C7M2|A0A1S3C7M2_CUCME (ras-related protein RABA5b OS=Cucumis melo OX=3656 GN=LOC103497619 PE=4 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 1.1e-81 Identity = 216/230 (93.91%), Postives = 216/230 (93.91%), Query Frame = 0
BLAST of MELO3C021114.2.1 vs. TrEMBL
Match: tr|A0A0A0K5A2|A0A0A0K5A2_CUCSA (RAB11G OS=Cucumis sativus OX=3659 GN=Csa_7G368110 PE=4 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 2.0e-78 Identity = 166/226 (73.45%), Postives = 168/226 (74.34%), Query Frame = 0
BLAST of MELO3C021114.2.1 vs. TrEMBL
Match: tr|A0A2I4F7M7|A0A2I4F7M7_9ROSI (ras-related protein RABA5b-like OS=Juglans regia OX=51240 GN=LOC108996293 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 2.7e-67 Identity = 144/225 (64.00%), Postives = 154/225 (68.44%), Query Frame = 0
BLAST of MELO3C021114.2.1 vs. TrEMBL
Match: tr|A0A061DLV5|A0A061DLV5_THECC (RAB GTPase A5B OS=Theobroma cacao OX=3641 GN=TCM_002700 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.7e-66 Identity = 145/231 (62.77%), Postives = 157/231 (67.97%), Query Frame = 0
BLAST of MELO3C021114.2.1 vs. TrEMBL
Match: tr|A0A1U8P6G2|A0A1U8P6G2_GOSHI (ras-related protein RABA5b-like OS=Gossypium hirsutum OX=3635 GN=LOC107954694 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 3.9e-66 Identity = 141/227 (62.11%), Postives = 157/227 (69.16%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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