MELO3C021015T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C021015T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_11
Location	chr1 : 24433459 .. 24434220 (-)
Sequence length	762

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGAACAACAAGATCAGAAAAAGATGTATTAAAGATAATTCATCCAGGAAAACACATAGAGACTTATACCAAACCAATACTTGCCTCTGAGGTCCTAGAAAAATATCCTAAATTTTGCATCACAAGACCTGATGTCTTTAAATTTCCATGGATTGTTGTGAGGTCTGATTCCCTTTTGGTCCCTGGAAAAGTATTCCTTCTTGTCCCTAAACGTACCCTCTATCGCCTCTTGAAGACCAACCATCCACCTGATGGCTCGTTGCCATCGCTGTTGTCGTCGCCTCTATCTCGCTCTTTCTCAAGACCATCCTTACCTTTTAGGTCAAATGCGGGAACAACTCCAAAGCACCTAACTCATCTCCGTAGATCCCAGTTGAAGTCATCGGGTGAAGACGCTCATGTTGAGTCGTGGTTGTCAATGTTGCCTCCACACGGAGTTGGCAATAAGAGATCAACCGTGAGGTATTCCTCTTCCCATGTGCATGACTGCTACAAATGTGGCAATGTACCTAGTGCCGATATGTCGAGGGAGGATGTCGAAAATGTCCGCGACCATGGTGACAGAAAACGGAAAACAACGAGGACGTCCTTGAGATCTTGCATGAGAAAGCCTGGGAGTGCTCCTCGGTTGCCTAATTTGAAAGTGAGATTTTCAATTCCGAATGAAGATATTGTTGAACCTGTAGCCAAACAGAGGACAGTTATTGAGTCCCTCTCAAAACTTGCTACCTCAATAATGGTTGATGTATGTAGATGA

mRNA sequence

ATGGGAAGAACAACAAGATCAGAAAAAGATGTATTAAAGATAATTCATCCAGGAAAACACATAGAGACTTATACCAAACCAATACTTGCCTCTGAGGTCCTAGAAAAATATCCTAAATTTTGCATCACAAGACCTGATGTCTTTAAATTTCCATGGATTGTTGTGAGGTCTGATTCCCTTTTGGTCCCTGGAAAAGTATTCCTTCTTGTCCCTAAACGTACCCTCTATCGCCTCTTGAAGACCAACCATCCACCTGATGGCTCGTTGCCATCGCTGTTGTCGTCGCCTCTATCTCGCTCTTTCTCAAGACCATCCTTACCTTTTAGGTCAAATGCGGGAACAACTCCAAAGCACCTAACTCATCTCCGTAGATCCCAGTTGAAGTCATCGGGTGAAGACGCTCATGTTGAGTCGTGGTTGTCAATGTTGCCTCCACACGGAGTTGGCAATAAGAGATCAACCGTGAGGTATTCCTCTTCCCATGTGCATGACTGCTACAAATGTGGCAATGTACCTAGTGCCGATATGTCGAGGGAGGATGTCGAAAATGTCCGCGACCATGGTGACAGAAAACGGAAAACAACGAGGACGTCCTTGAGATCTTGCATGAGAAAGCCTGGGAGTGCTCCTCGGTTGCCTAATTTGAAAGTGAGATTTTCAATTCCGAATGAAGATATTGTTGAACCTGTAGCCAAACAGAGGACAGTTATTGAGTCCCTCTCAAAACTTGCTACCTCAATAATGGTTGATGTATGTAGATGA

Coding sequence (CDS)

ATGGGAAGAACAACAAGATCAGAAAAAGATGTATTAAAGATAATTCATCCAGGAAAACACATAGAGACTTATACCAAACCAATACTTGCCTCTGAGGTCCTAGAAAAATATCCTAAATTTTGCATCACAAGACCTGATGTCTTTAAATTTCCATGGATTGTTGTGAGGTCTGATTCCCTTTTGGTCCCTGGAAAAGTATTCCTTCTTGTCCCTAAACGTACCCTCTATCGCCTCTTGAAGACCAACCATCCACCTGATGGCTCGTTGCCATCGCTGTTGTCGTCGCCTCTATCTCGCTCTTTCTCAAGACCATCCTTACCTTTTAGGTCAAATGCGGGAACAACTCCAAAGCACCTAACTCATCTCCGTAGATCCCAGTTGAAGTCATCGGGTGAAGACGCTCATGTTGAGTCGTGGTTGTCAATGTTGCCTCCACACGGAGTTGGCAATAAGAGATCAACCGTGAGGTATTCCTCTTCCCATGTGCATGACTGCTACAAATGTGGCAATGTACCTAGTGCCGATATGTCGAGGGAGGATGTCGAAAATGTCCGCGACCATGGTGACAGAAAACGGAAAACAACGAGGACGTCCTTGAGATCTTGCATGAGAAAGCCTGGGAGTGCTCCTCGGTTGCCTAATTTGAAAGTGAGATTTTCAATTCCGAATGAAGATATTGTTGAACCTGTAGCCAAACAGAGGACAGTTATTGAGTCCCTCTCAAAACTTGCTACCTCAATAATGGTTGATGTATGTAGATGA

Protein sequence

MGRTTRSEKDVLKIIHPGKHIETYTKPILASEVLEKYPKFCITRPDVFKFPWIVVRSDSLLVPGKVFLLVPKRTLYRLLKTNHPPDGSLPSLLSSPLSRSFSRPSLPFRSNAGTTPKHLTHLRRSQLKSSGEDAHVESWLSMLPPHGVGNKRSTVRYSSSHVHDCYKCGNVPSADMSREDVENVRDHGDRKRKTTRTSLRSCMRKPGSAPRLPNLKVRFSIPNEDIVEPVAKQRTVIESLSKLATSIMVDVCR*

Homology

[Close]

BLAST of MELO3C021015T1 vs. TrEMBL
Match: A0A0A0K557_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G339650 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 2.1e-123
Identity = 228/261 (87.36%), Postives = 237/261 (90.80%), Query Frame = 1


Query: 1   MGRTTRSEKDVLKIIHPGKHIETYTKPILASEVLEKYPKFCITRPDVFKFPWIVVRSDSL 60
           MGRTT +EK VLK+IHPGKH+ETYTKPILASEVL+KYPKFCITRPDVFK+PWIVVRSDSL
Sbjct: 1   MGRTTGTEKGVLKLIHPGKHVETYTKPILASEVLKKYPKFCITRPDVFKYPWIVVRSDSL 60

Query: 61  LVPGKVFLLVPKRTLYRLLKTNHPPDGSLPSLLSSPLSRSFSRPSLPFRSNAGTTPKHLT 120
           LVPGKVFLLVPKRTL+RLLKTNHPPDGSLPSLLSSPLSRSFSRPSLP RSNAGTTPKHLT
Sbjct: 61  LVPGKVFLLVPKRTLHRLLKTNHPPDGSLPSLLSSPLSRSFSRPSLPLRSNAGTTPKHLT 120

Query: 121 HLRRSQLKSSGE--------DAHVESWLSMLPPHGVGNKRSTVRYSSSHVHDCYKCGNVP 180
           HLRRSQ K  GE        +AHVE WLSMLPPHGVGNKRSTVRYSSSHVHDCYKCG+VP
Sbjct: 121 HLRRSQSKPLGEVDGIRNRKNAHVEWWLSMLPPHGVGNKRSTVRYSSSHVHDCYKCGSVP 180

Query: 181 SADMSREDVENVRDHGDRKRKTTRTSLRSCMRKPGSAPRLPNLKVRFSIPNEDIVEPVAK 240
           S DMSREDVEN R  G RK KTT TSLRSCMRKPGSAPRL NLKVRFSIPNEDIVEPVAK
Sbjct: 181 STDMSREDVENDRGGGYRKWKTT-TSLRSCMRKPGSAPRLANLKVRFSIPNEDIVEPVAK 240

Query: 241 QRTVIESLSKLATSIMVDVCR 254
           QRTVIESLSKLA S+MVDVCR
Sbjct: 241 QRTVIESLSKLAASLMVDVCR 260

[Close]

BLAST of MELO3C021015T1 vs. TrEMBL
Match: A0A067K296_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17548 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.3e-28
Identity = 88/254 (34.65%), Postives = 128/254 (50.39%), Query Frame = 1


Query: 8   EKDVLKIIHPGKHIETYTKPILASEVLEKYPKFCITRPDVFKFPWIVVRSDSLLVPGKVF 67
           E+ VLK++HPG+H+E +TKPI A+EVL+KYP+  +TRPDVFK+PWIVV+ +S+L  G+VF
Sbjct: 7   EEGVLKLVHPGRHVEIHTKPITAAEVLQKYPRHSVTRPDVFKYPWIVVKPESVLNLGRVF 66

Query: 68  LLVPKRTLYRLLKTNHPPDGSLPSLLSSPLS------RSFSRPSLPFRSNAGTTPKHLTH 127
            +VP RT+Y L+K     +    S   S +S      +     S P +S+AG+TPKHL  
Sbjct: 67  FIVPNRTIYNLVKAQR--ESQQQSQEKSQISKHHVKNKQVQNSSSPVKSHAGSTPKHLDR 126

Query: 128 LRRSQLKSS--------------------GEDAHVESWLSM----------LPPHGVGNK 187
             R +L  S                     +   V SW  +          L      + 
Sbjct: 127 HHREKLNQSPTIKSCIWMPSLDQDLNSRTRKQNKVSSWPEVTIKPKNANFRLEEEVYEDS 186

Query: 188 RSTVRYSSSHVHDCYKCGNVPSADMSREDVENVRDHGDRKRKTTRTSLRSCMRKPGSAPR 226
           R+ +RYS  H  D   C +  +AD  R D +   +HG           +SC+RKP S  +
Sbjct: 187 RTKIRYSYQH-KDNDICTDNMTADCDRNDGDLEFNHGKEV-----AMFKSCLRKPDSDVK 246

[Close]

BLAST of MELO3C021015T1 vs. TrEMBL
Match: V4VUD1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023784mg PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.0e-26
Identity = 85/241 (35.27%), Postives = 124/241 (51.45%), Query Frame = 1


Query: 7   SEKDVLKIIHPGKHIETYTKPILASEVLEKYPKFCITRPDVFKFPWIVVRSDSLLVPGKV 66
           SEK VLK++HPG+++E    PI A+EV++K P+ CITRPD+FK+PWIVV+ +S+L  G+V
Sbjct: 6   SEKGVLKLVHPGRYVEIRRAPITAAEVMDKNPRHCITRPDIFKYPWIVVKPESVLNLGRV 65

Query: 67  FLLVPKRTLYRLLKTNHPPDGSLPSLLSSPLSRSFSRPS----LPFRSNAGTTPKHLTHL 126
           F +VP RT+Y LLK    PD          LSR    PS     P ++ AG TPKH  ++
Sbjct: 66  FFIVPNRTIYHLLKARGLPD---------QLSRQSQSPSPTGTSPLKAYAGMTPKHQENI 125

Query: 127 R--------RSQLKSSGEDA----------HVESWLSMLPPHGVGNKRSTVRYSSSHVHD 186
           +         S  ++S E+           +VESW           +    R    +  +
Sbjct: 126 QFLEQLMQAMSSYETSPEEQEHGRRFRKEYNVESW----------PENYATRIGFFNAKE 185

Query: 187 CYKCGNVPSADMSREDVENVRDHGDRKRKTTRTSLRSCMRKPGSAPRLPNLKVRFSIPNE 226
            Y   N+ S    RED +      + ++    T L+SC+RK  S  +  +LKV F +P E
Sbjct: 186 YY--SNISSKFSEREDKDT-----ESEQTKQVTVLKSCLRKQDSVRKSRHLKVSFVLPAE 220

[Close]

BLAST of MELO3C021015T1 vs. TrEMBL
Match: M5VHL6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022741mg PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.2e-26
Identity = 91/264 (34.47%), Postives = 134/264 (50.76%), Query Frame = 1


Query: 1   MGRTTRSEKDVLKIIHPGKHIETYTKPILASEVLEKYPKFCITRPDVFKFPWIVVRSDSL 60
           MG  TR E+ VLK++ PG+ +E + +PI A EV+ KYP+  ITRPD+F+FPWIVV+++++
Sbjct: 1   MGSITR-EEGVLKLVRPGRRVEVHKEPITAQEVMRKYPRHSITRPDIFEFPWIVVKAEAV 60

Query: 61  LVPGKVFLLVPKRTLYRLLKT-NHPPDGSLPSLLSSPLSRSFSRP----------SLPFR 120
           L PGKVF +VP RT+Y+LLK   H    S  S  SS   R  +R           + P +
Sbjct: 61  LTPGKVFFIVPNRTIYQLLKAREHGYQSSFSS--SSQQQRQSARDHGHHPASEQLTSPPK 120

Query: 121 SNAGTTPKHLTHLRR--------SQLKSSGE----------DAHVESWLSM----LPPHG 180
           + AG T KH    RR        + +  S E          D+ V +W  +       HG
Sbjct: 121 AYAGVTLKHQERRRRLKHQFFSCATVSPSDEEVDSDKGLQTDSQVGAWPGLSSTNKKTHG 180

Query: 181 VGNKR----STVRYSSSHVHDCYKCGNVPS--ADMSREDVENVRDHGDRKRKTTRTSLRS 226
              ++    S ++     V+D  K  N+ +  A +   D + V            T L+S
Sbjct: 181 KSKQKPQINSKIKTRYGRVYDYSKKNNITAKLAGLEITDSKQV------------TLLKS 240

[Close]

BLAST of MELO3C021015T1 vs. TrEMBL
Match: A0A0L9U536_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g127800 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.6e-25
Identity = 82/232 (35.34%), Postives = 118/232 (50.86%), Query Frame = 1


Query: 6   RSEKDVLKIIHPGKHIETYTKPILASEVLEKYPKFCITRPDVFKFPWIVVRSDSLLVPGK 65
           + EK VLK++HPGKH+E + KP+ A EVL K P+ CITRPDVFKFPWIVV+ +S+L+PG 
Sbjct: 5   KREKRVLKLVHPGKHVEVHRKPVRAEEVLRKNPRHCITRPDVFKFPWIVVKPESVLLPGS 64

Query: 66  VFLLVPKRTLYRLLKTNHPPDGSLPSLLSSPLSRSFSRPS---------------LPFRS 125
           VFL+VP  T+Y LLK +     S+ S + + +     +P                LPF S
Sbjct: 65  VFLIVPDHTIYDLLKASTTQTISIQSQVQTQMHNQQLKPEACDGIGFSPQMHNLFLPFLS 124

Query: 126 NAGTTPKHLTHLRRSQLKSSGEDAHVESWLSMLPPHGVGNKRSTVRYSSSHVHDCYKC-G 185
           +     + + H+RR   +S  + +HVE              RS    S       YK   
Sbjct: 125 HEPVLSQDMEHVRRYGERSENQ-SHVEI-------------RSINDVSPFEFRPYYKALK 184

Query: 186 NVPSADMSREDVENVRDHGDRKRKTTRTSLRSCMRKPGSAPRLPNLKVRFSI 222
               A+M   D++N  +      +   T L+SC+R P S  +   LKV F++
Sbjct: 185 YYEEAEML--DLKNGVNLEFVSSEHVTTGLKSCLRTPNSMRKNLKLKVSFNV 220

[Close]

BLAST of MELO3C021015T1 vs. NCBI nr
Match: gi|700189360|gb|KGN44593.1| (hypothetical protein Csa_7G339650 [Cucumis sativus])

HSP 1 Score: 449.9 bits (1156), Expect = 3.0e-123
Identity = 228/261 (87.36%), Postives = 237/261 (90.80%), Query Frame = 1


Query: 1   MGRTTRSEKDVLKIIHPGKHIETYTKPILASEVLEKYPKFCITRPDVFKFPWIVVRSDSL 60
           MGRTT +EK VLK+IHPGKH+ETYTKPILASEVL+KYPKFCITRPDVFK+PWIVVRSDSL
Sbjct: 1   MGRTTGTEKGVLKLIHPGKHVETYTKPILASEVLKKYPKFCITRPDVFKYPWIVVRSDSL 60

Query: 61  LVPGKVFLLVPKRTLYRLLKTNHPPDGSLPSLLSSPLSRSFSRPSLPFRSNAGTTPKHLT 120
           LVPGKVFLLVPKRTL+RLLKTNHPPDGSLPSLLSSPLSRSFSRPSLP RSNAGTTPKHLT
Sbjct: 61  LVPGKVFLLVPKRTLHRLLKTNHPPDGSLPSLLSSPLSRSFSRPSLPLRSNAGTTPKHLT 120

Query: 121 HLRRSQLKSSGE--------DAHVESWLSMLPPHGVGNKRSTVRYSSSHVHDCYKCGNVP 180
           HLRRSQ K  GE        +AHVE WLSMLPPHGVGNKRSTVRYSSSHVHDCYKCG+VP
Sbjct: 121 HLRRSQSKPLGEVDGIRNRKNAHVEWWLSMLPPHGVGNKRSTVRYSSSHVHDCYKCGSVP 180

Query: 181 SADMSREDVENVRDHGDRKRKTTRTSLRSCMRKPGSAPRLPNLKVRFSIPNEDIVEPVAK 240
           S DMSREDVEN R  G RK KTT TSLRSCMRKPGSAPRL NLKVRFSIPNEDIVEPVAK
Sbjct: 181 STDMSREDVENDRGGGYRKWKTT-TSLRSCMRKPGSAPRLANLKVRFSIPNEDIVEPVAK 240

Query: 241 QRTVIESLSKLATSIMVDVCR 254
           QRTVIESLSKLA S+MVDVCR
Sbjct: 241 QRTVIESLSKLAASLMVDVCR 260

[Close]

BLAST of MELO3C021015T1 vs. NCBI nr
Match: gi|643713725|gb|KDP26390.1| (hypothetical protein JCGZ_17548 [Jatropha curcas])

HSP 1 Score: 133.3 bits (334), Expect = 6.1e-28
Identity = 88/254 (34.65%), Postives = 128/254 (50.39%), Query Frame = 1


Query: 8   EKDVLKIIHPGKHIETYTKPILASEVLEKYPKFCITRPDVFKFPWIVVRSDSLLVPGKVF 67
           E+ VLK++HPG+H+E +TKPI A+EVL+KYP+  +TRPDVFK+PWIVV+ +S+L  G+VF
Sbjct: 7   EEGVLKLVHPGRHVEIHTKPITAAEVLQKYPRHSVTRPDVFKYPWIVVKPESVLNLGRVF 66

Query: 68  LLVPKRTLYRLLKTNHPPDGSLPSLLSSPLS------RSFSRPSLPFRSNAGTTPKHLTH 127
            +VP RT+Y L+K     +    S   S +S      +     S P +S+AG+TPKHL  
Sbjct: 67  FIVPNRTIYNLVKAQR--ESQQQSQEKSQISKHHVKNKQVQNSSSPVKSHAGSTPKHLDR 126

Query: 128 LRRSQLKSS--------------------GEDAHVESWLSM----------LPPHGVGNK 187
             R +L  S                     +   V SW  +          L      + 
Sbjct: 127 HHREKLNQSPTIKSCIWMPSLDQDLNSRTRKQNKVSSWPEVTIKPKNANFRLEEEVYEDS 186

Query: 188 RSTVRYSSSHVHDCYKCGNVPSADMSREDVENVRDHGDRKRKTTRTSLRSCMRKPGSAPR 226
           R+ +RYS  H  D   C +  +AD  R D +   +HG           +SC+RKP S  +
Sbjct: 187 RTKIRYSYQH-KDNDICTDNMTADCDRNDGDLEFNHGKEV-----AMFKSCLRKPDSDVK 246

[Close]

BLAST of MELO3C021015T1 vs. NCBI nr
Match: gi|567902232|ref|XP_006443604.1| (hypothetical protein CICLE_v10023784mg [Citrus clementina])

HSP 1 Score: 128.6 bits (322), Expect = 1.5e-26
Identity = 85/241 (35.27%), Postives = 124/241 (51.45%), Query Frame = 1


Query: 7   SEKDVLKIIHPGKHIETYTKPILASEVLEKYPKFCITRPDVFKFPWIVVRSDSLLVPGKV 66
           SEK VLK++HPG+++E    PI A+EV++K P+ CITRPD+FK+PWIVV+ +S+L  G+V
Sbjct: 6   SEKGVLKLVHPGRYVEIRRAPITAAEVMDKNPRHCITRPDIFKYPWIVVKPESVLNLGRV 65

Query: 67  FLLVPKRTLYRLLKTNHPPDGSLPSLLSSPLSRSFSRPS----LPFRSNAGTTPKHLTHL 126
           F +VP RT+Y LLK    PD          LSR    PS     P ++ AG TPKH  ++
Sbjct: 66  FFIVPNRTIYHLLKARGLPD---------QLSRQSQSPSPTGTSPLKAYAGMTPKHQENI 125

Query: 127 R--------RSQLKSSGEDA----------HVESWLSMLPPHGVGNKRSTVRYSSSHVHD 186
           +         S  ++S E+           +VESW           +    R    +  +
Sbjct: 126 QFLEQLMQAMSSYETSPEEQEHGRRFRKEYNVESW----------PENYATRIGFFNAKE 185

Query: 187 CYKCGNVPSADMSREDVENVRDHGDRKRKTTRTSLRSCMRKPGSAPRLPNLKVRFSIPNE 226
            Y   N+ S    RED +      + ++    T L+SC+RK  S  +  +LKV F +P E
Sbjct: 186 YY--SNISSKFSEREDKDT-----ESEQTKQVTVLKSCLRKQDSVRKSRHLKVSFVLPAE 220

[Close]

BLAST of MELO3C021015T1 vs. NCBI nr
Match: gi|595791049|ref|XP_007199273.1| (hypothetical protein PRUPE_ppa022741mg [Prunus persica])

HSP 1 Score: 126.3 bits (316), Expect = 7.5e-26
Identity = 91/264 (34.47%), Postives = 134/264 (50.76%), Query Frame = 1


Query: 1   MGRTTRSEKDVLKIIHPGKHIETYTKPILASEVLEKYPKFCITRPDVFKFPWIVVRSDSL 60
           MG  TR E+ VLK++ PG+ +E + +PI A EV+ KYP+  ITRPD+F+FPWIVV+++++
Sbjct: 1   MGSITR-EEGVLKLVRPGRRVEVHKEPITAQEVMRKYPRHSITRPDIFEFPWIVVKAEAV 60

Query: 61  LVPGKVFLLVPKRTLYRLLKT-NHPPDGSLPSLLSSPLSRSFSRP----------SLPFR 120
           L PGKVF +VP RT+Y+LLK   H    S  S  SS   R  +R           + P +
Sbjct: 61  LTPGKVFFIVPNRTIYQLLKAREHGYQSSFSS--SSQQQRQSARDHGHHPASEQLTSPPK 120

Query: 121 SNAGTTPKHLTHLRR--------SQLKSSGE----------DAHVESWLSM----LPPHG 180
           + AG T KH    RR        + +  S E          D+ V +W  +       HG
Sbjct: 121 AYAGVTLKHQERRRRLKHQFFSCATVSPSDEEVDSDKGLQTDSQVGAWPGLSSTNKKTHG 180

Query: 181 VGNKR----STVRYSSSHVHDCYKCGNVPS--ADMSREDVENVRDHGDRKRKTTRTSLRS 226
              ++    S ++     V+D  K  N+ +  A +   D + V            T L+S
Sbjct: 181 KSKQKPQINSKIKTRYGRVYDYSKKNNITAKLAGLEITDSKQV------------TLLKS 240

[Close]

BLAST of MELO3C021015T1 vs. NCBI nr
Match: gi|920694671|gb|KOM37896.1| (hypothetical protein LR48_Vigan03g127800 [Vigna angularis])

HSP 1 Score: 124.0 bits (310), Expect = 3.7e-25
Identity = 82/232 (35.34%), Postives = 118/232 (50.86%), Query Frame = 1


Query: 6   RSEKDVLKIIHPGKHIETYTKPILASEVLEKYPKFCITRPDVFKFPWIVVRSDSLLVPGK 65
           + EK VLK++HPGKH+E + KP+ A EVL K P+ CITRPDVFKFPWIVV+ +S+L+PG 
Sbjct: 5   KREKRVLKLVHPGKHVEVHRKPVRAEEVLRKNPRHCITRPDVFKFPWIVVKPESVLLPGS 64

Query: 66  VFLLVPKRTLYRLLKTNHPPDGSLPSLLSSPLSRSFSRPS---------------LPFRS 125
           VFL+VP  T+Y LLK +     S+ S + + +     +P                LPF S
Sbjct: 65  VFLIVPDHTIYDLLKASTTQTISIQSQVQTQMHNQQLKPEACDGIGFSPQMHNLFLPFLS 124

Query: 126 NAGTTPKHLTHLRRSQLKSSGEDAHVESWLSMLPPHGVGNKRSTVRYSSSHVHDCYKC-G 185
           +     + + H+RR   +S  + +HVE              RS    S       YK   
Sbjct: 125 HEPVLSQDMEHVRRYGERSENQ-SHVEI-------------RSINDVSPFEFRPYYKALK 184

Query: 186 NVPSADMSREDVENVRDHGDRKRKTTRTSLRSCMRKPGSAPRLPNLKVRFSI 222
               A+M   D++N  +      +   T L+SC+R P S  +   LKV F++
Sbjct: 185 YYEEAEML--DLKNGVNLEFVSSEHVTTGLKSCLRTPNSMRKNLKLKVSFNV 220

The following BLAST results are available for this feature:

BLAST of MELO3C021015T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K557_CUCSA	2.1e-123	87.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G339650 PE=4 SV=1	[more]
A0A067K296_JATCU	4.3e-28	34.65	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17548 PE=4 SV=1	[more]
V4VUD1_9ROSI	1.0e-26	35.27	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023784mg PE=4 SV=1	[more]
M5VHL6_PRUPE	5.2e-26	34.47	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022741mg PE=4 SV=1	[more]
A0A0L9U536_PHAAN	2.6e-25	35.34	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g127800 PE=4 SV=1	[more]

BLAST of MELO3C021015T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700189360\|gb\|KGN44593.1\|	3.0e-123	87.36	hypothetical protein Csa_7G339650 [Cucumis sativus]	[more]
gi\|643713725\|gb\|KDP26390.1\|	6.1e-28	34.65	hypothetical protein JCGZ_17548 [Jatropha curcas]	[more]
gi\|567902232\|ref\|XP_006443604.1\|	1.5e-26	35.27	hypothetical protein CICLE_v10023784mg [Citrus clementina]	[more]
gi\|595791049\|ref\|XP_007199273.1\|	7.5e-26	34.47	hypothetical protein PRUPE_ppa022741mg [Prunus persica]	[more]
gi\|920694671\|gb\|KOM37896.1\|	3.7e-25	35.34	hypothetical protein LR48_Vigan03g127800 [Vigna angularis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C021015	MELO3C021015	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C021015T1	MELO3C021015T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C021015T1.cds1	MELO3C021015T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 7..110 score: 2.7
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 1..82 score: 7.4
None	No IPR available	PANTHER	PTHR33052:SF9	SUBFAMILY NOT NAMED	coord: 1..82 score: 7.4