MELO3C020763.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACCAAATTCAATTGTTAACTTCCTCTTCTACTTGGTTCTGTACCAATCTGATCAAAACTTAAAACATTTCTCAAATATTTCTCAACCTTTCATCTTAACACAAATGGGGATTAGATTGCTATCTTTGGTTCCTCATGCCAAGCAAATCTTGAAGATGCAGTCAGGGTTTACCAAAAACCGACTGAATGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAAGGAAGCGGTTCGTGGTTCCAATATCTTACTTAAACGATCCATCGTTCCAGCAACTGCTCAACCGTGCAGAGGAAGAGTTTGGCTTTCATCATCCCCATGGGGGTCTGACAATTCCTTGCAAAGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTAGCTTGAAGGATGAAGAGTAAAGAGCAATCTGTCATTTATGACAGTTTTTGTCTGTTCTTTTTCTCAATTCACTTGCTTTTTGACTTGCAAGAGAGTGTATAAATTAGAGTGCCTTCTTACTTGTATATTGAGCATCATTGTAAAGGAGAATTACTTAAAGAAATTGTGACTATAAAAAAGGTTAATACAGAAACAATTCAGCATCAAC AACCAAATTCAATTGTTAACTTCCTCTTCTACTTGGTTCTGTACCAATCTGATCAAAACTTAAAACATTTCTCAAATATTTCTCAACCTTTCATCTTAACACAAATGGGGATTAGATTGCTATCTTTGGTTCCTCATGCCAAGCAAATCTTGAAGATGCAGTCAGGGTTTACCAAAAACCGACTGAATGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAAGGAAGCGGTTCGTGGTTCCAATATCTTACTTAAACGATCCATCGTTCCAGCAACTGCTCAACCGTGCAGAGGAAGAGTTTGGCTTTCATCATCCCCATGGGGGTCTGACAATTCCTTGCAAAGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTAGCTTGAAGGATGAAGAGTAAAGAGCAATCTGTCATTTATGACAGTTTTTGTCTGTTCTTTTTCTCAATTCACTTGCTTTTTGACTTGCAAGAGAGTGTATAAATTAGAGTGCCTTCTTACTTGTATATTGAGCATCATTGTAAAGGAGAATTACTTAAAGAAATTGTGACTATAAAAAAGGTTAATACAGAAACAATTCAGCATCAAC CCAAATTCAATTGTTAACTTCCTCTTCTACTTGGTTCTGTACCAATCTGATCAAAACTTAAAACATTTCTCAAATATTTCTCAACCTTTCATCTTAACACAAATGGGGATTAGATTGCTATCTTTGGTTCCTCATGCCAAGCAAATCTTGAAGATGCAGTCAGGGTTTACCAAAAACCGACTGAATGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAAGGAAGCGGTTCGTGGTTCCAATATCTTACTTAAACGATCCATCGTTCCAGCAACTGCTCAACCGTGCAGAGGAAGAGTTTGGCTTTCATCATCCCCATGGGGGTCTGACAATTCCTTGCAAAGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTAGCTTGA PNSIVNFLFYLVLYQSDQNLKHFSNISQPFILTQMGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
BLAST of MELO3C020763.2.1 vs. NCBI nr
Match: XP_008457632.1 (PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo]) HSP 1 Score: 202.2 bits (513), Expect = 1.1e-48 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of MELO3C020763.2.1 vs. NCBI nr
Match: KGN61876.1 (hypothetical protein Csa_2G258720 [Cucumis sativus]) HSP 1 Score: 195.3 bits (495), Expect = 1.3e-46 Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of MELO3C020763.2.1 vs. NCBI nr
Match: XP_016902164.1 (PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo]) HSP 1 Score: 190.3 bits (482), Expect = 4.2e-45 Identity = 89/97 (91.75%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of MELO3C020763.2.1 vs. NCBI nr
Match: XP_023512611.1 (auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 186.4 bits (472), Expect = 6.1e-44 Identity = 88/97 (90.72%), Postives = 93/97 (95.88%), Query Frame = 0
BLAST of MELO3C020763.2.1 vs. NCBI nr
Match: XP_011649273.1 (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus] >KGN61878.1 hypothetical protein Csa_2G258740 [Cucumis sativus]) HSP 1 Score: 186.0 bits (471), Expect = 8.0e-44 Identity = 87/97 (89.69%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of MELO3C020763.2.1 vs. TAIR10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 117.9 bits (294), Expect = 4.8e-27 Identity = 61/105 (58.10%), Postives = 78/105 (74.29%), Query Frame = 0
BLAST of MELO3C020763.2.1 vs. TAIR10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 116.3 bits (290), Expect = 1.4e-26 Identity = 56/97 (57.73%), Postives = 71/97 (73.20%), Query Frame = 0
BLAST of MELO3C020763.2.1 vs. TAIR10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 115.9 bits (289), Expect = 1.8e-26 Identity = 55/98 (56.12%), Postives = 74/98 (75.51%), Query Frame = 0
BLAST of MELO3C020763.2.1 vs. TAIR10
Match: AT4G34790.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 111.7 bits (278), Expect = 3.5e-25 Identity = 60/108 (55.56%), Postives = 76/108 (70.37%), Query Frame = 0
BLAST of MELO3C020763.2.1 vs. TAIR10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 111.3 bits (277), Expect = 4.5e-25 Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 0
BLAST of MELO3C020763.2.1 vs. Swiss-Prot
Match: sp|Q9FK62|SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 8.2e-24 Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 0
BLAST of MELO3C020763.2.1 vs. Swiss-Prot
Match: sp|Q9FJG0|SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 3.1e-23 Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of MELO3C020763.2.1 vs. Swiss-Prot
Match: sp|Q9FJF7|SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 6.9e-23 Identity = 46/66 (69.70%), Postives = 58/66 (87.88%), Query Frame = 0
BLAST of MELO3C020763.2.1 vs. Swiss-Prot
Match: sp|Q9FJF9|SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.2e-22 Identity = 46/66 (69.70%), Postives = 58/66 (87.88%), Query Frame = 0
BLAST of MELO3C020763.2.1 vs. Swiss-Prot
Match: sp|Q9FJF6|SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.2e-22 Identity = 46/65 (70.77%), Postives = 57/65 (87.69%), Query Frame = 0
BLAST of MELO3C020763.2.1 vs. TrEMBL
Match: tr|A0A1S3C5I3|A0A1S3C5I3_CUCME (auxin-responsive protein SAUR24-like OS=Cucumis melo OX=3656 GN=LOC103497281 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 7.1e-49 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of MELO3C020763.2.1 vs. TrEMBL
Match: tr|A0A0A0LPI0|A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258720 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 8.7e-47 Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of MELO3C020763.2.1 vs. TrEMBL
Match: tr|A0A1S4E1Q9|A0A1S4E1Q9_CUCME (auxin-responsive protein SAUR24-like OS=Cucumis melo OX=3656 GN=LOC107991561 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 2.8e-45 Identity = 89/97 (91.75%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of MELO3C020763.2.1 vs. TrEMBL
Match: tr|A0A0A0LJ99|A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258740 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 5.3e-44 Identity = 87/97 (89.69%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of MELO3C020763.2.1 vs. TrEMBL
Match: tr|A0A1S3C5X3|A0A1S3C5X3_CUCME (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497283 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.3e-42 Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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