MELO3C020751.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACCCCGCAAACGCACTACAACAAAAAGCGCTTTTATCGTTTCTCTTTTTCAATCACCTTCTCACCGGAGAAAACCGAAATGTCACCGGAGACCTCAAAAAGCCACAAGATCCGTCGCATTGTCCGCCTCCGTCAAATGCTACAACACTGGCGCAAAAAAGCACGCGTAGCTGCATCTAGAGCACCTCCATCCGACGTTCCCGCCGGTCACATCGCCGTCTGCGTCGGCACCGGCTGCCGTCGATTCATCGTCCCCACAACCTTCCTCAACCATCCGATCTTCCGTCAGTTACTCTCACAAGCCGAAGAAGAATACGGCTTCGAAACCCGAGGTCCTCTGGCTCTTCCCTGCGACGAATCGGTCTTCGAAGAGGTTCTCCGAGTCGTGGCTCGTTCTGAGTTGAGTAACACATCGCGAACTTCGAATCTTAAGGATTTAACAAGGCGATGCGACGAAGACGTTAGAAGTAAAAACCTCGAGTTCTTAGGCGAATCGAGTCCTTTACTGTATGGATTTTCCGATAATAAATCCGTTTGTTGAAGAGTTGTCGAGGTGAGTTGCCGCCGAGTCGACTCGGAGGATCGATGAATCGAGTTGCGGTGTGTCGATAAACTTCTTCTCTTTTACTTTATGTTCTAACAAATATCATAGCCATAAAATTATCGGTTTATATTGAAGCTAGGGGTCCTCCTCCAGTCAGATTTGGCCGGAGAGACGGCCATTAACGGCGTCGAATTGGAGGTTGGTATTTTTTTCTTTAATTCCTCTTTCTTTTATAGCTTGTAAATGCCCTAATGAGAGGCTTCCATTAACTTTTCTTACTAGAAATTAATTGAAGAAAAGTATAGATGAAATCTTCCTTTTTT AACCCCGCAAACGCACTACAACAAAAAGCGCTTTTATCGTTTCTCTTTTTCAATCACCTTCTCACCGGAGAAAACCGAAATGTCACCGGAGACCTCAAAAAGCCACAAGATCCGTCGCATTGTCCGCCTCCGTCAAATGCTACAACACTGGCGCAAAAAAGCACGCGTAGCTGCATCTAGAGCACCTCCATCCGACGTTCCCGCCGGTCACATCGCCGTCTGCGTCGGCACCGGCTGCCGTCGATTCATCGTCCCCACAACCTTCCTCAACCATCCGATCTTCCGTCAGTTACTCTCACAAGCCGAAGAAGAATACGGCTTCGAAACCCGAGGTCCTCTGGCTCTTCCCTGCGACGAATCGGTCTTCGAAGAGGTTCTCCGAGTCGTGGCTCGTTCTGAGTTGAGTAACACATCGCGAACTTCGAATCTTAAGGATTTAACAAGGCGATGCGACGAAGACGTTAGAAGTAAAAACCTCGAGTTCTTAGGCGAATCGAGTCCTTTACTGTATGGATTTTCCGATAATAAATCCGTTTGTTGAAGAGTTGTCGAGGTGAGTTGCCGCCGAGTCGACTCGGAGGATCGATGAATCGAGTTGCGGTGTGTCGATAAACTTCTTCTCTTTTACTTTATGTTCTAACAAATATCATAGCCATAAAATTATCGGTTTATATTGAAGCTAGGGGTCCTCCTCCAGTCAGATTTGGCCGGAGAGACGGCCATTAACGGCGTCGAATTGGAGGTTGGTATTTTTTTCTTTAATTCCTCTTTCTTTTATAGCTTGTAAATGCCCTAATGAGAGGCTTCCATTAACTTTTCTTACTAGAAATTAATTGAAGAAAAGTATAGATGAAATCTTCCTTTTTT ATGTCACCGGAGACCTCAAAAAGCCACAAGATCCGTCGCATTGTCCGCCTCCGTCAAATGCTACAACACTGGCGCAAAAAAGCACGCGTAGCTGCATCTAGAGCACCTCCATCCGACGTTCCCGCCGGTCACATCGCCGTCTGCGTCGGCACCGGCTGCCGTCGATTCATCGTCCCCACAACCTTCCTCAACCATCCGATCTTCCGTCAGTTACTCTCACAAGCCGAAGAAGAATACGGCTTCGAAACCCGAGGTCCTCTGGCTCTTCCCTGCGACGAATCGGTCTTCGAAGAGGTTCTCCGAGTCGTGGCTCGTTCTGAGTTGAGTAACACATCGCGAACTTCGAATCTTAAGGATTTAACAAGGCGATGCGACGAAGACGTTAGAAGTAAAAACCTCGAGTTCTTAGGCGAATCGAGTCCTTTACTGTATGGATTTTCCGATAATAAATCCGTTTGTTGA MSPETSKSHKIRRIVRLRQMLQHWRKKARVAASRAPPSDVPAGHIAVCVGTGCRRFIVPTTFLNHPIFRQLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVARSELSNTSRTSNLKDLTRRCDEDVRSKNLEFLGESSPLLYGFSDNKSVC
BLAST of MELO3C020751.2.1 vs. NCBI nr
Match: XP_008457620.1 (PREDICTED: auxin-responsive protein SAUR64 [Cucumis melo]) HSP 1 Score: 308.9 bits (790), Expect = 9.5e-81 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of MELO3C020751.2.1 vs. NCBI nr
Match: XP_004147056.1 (PREDICTED: auxin-induced protein X10A-like [Cucumis sativus]) HSP 1 Score: 290.0 bits (741), Expect = 4.6e-75 Identity = 144/153 (94.12%), Postives = 146/153 (95.42%), Query Frame = 0
BLAST of MELO3C020751.2.1 vs. NCBI nr
Match: KGN61862.1 (hypothetical protein Csa_2G257100 [Cucumis sativus]) HSP 1 Score: 290.0 bits (741), Expect = 4.6e-75 Identity = 144/153 (94.12%), Postives = 146/153 (95.42%), Query Frame = 0
BLAST of MELO3C020751.2.1 vs. NCBI nr
Match: XP_023512602.1 (auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 244.2 bits (622), Expect = 2.9e-61 Identity = 119/149 (79.87%), Postives = 137/149 (91.95%), Query Frame = 0
BLAST of MELO3C020751.2.1 vs. NCBI nr
Match: XP_022943918.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata]) HSP 1 Score: 243.8 bits (621), Expect = 3.8e-61 Identity = 120/149 (80.54%), Postives = 136/149 (91.28%), Query Frame = 0
BLAST of MELO3C020751.2.1 vs. TAIR10
Match: AT1G19840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 158.7 bits (400), Expect = 2.9e-39 Identity = 80/150 (53.33%), Postives = 112/150 (74.67%), Query Frame = 0
BLAST of MELO3C020751.2.1 vs. TAIR10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 147.5 bits (371), Expect = 6.7e-36 Identity = 77/151 (50.99%), Postives = 106/151 (70.20%), Query Frame = 0
BLAST of MELO3C020751.2.1 vs. TAIR10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 144.1 bits (362), Expect = 7.4e-35 Identity = 78/149 (52.35%), Postives = 102/149 (68.46%), Query Frame = 0
BLAST of MELO3C020751.2.1 vs. TAIR10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 139.4 bits (350), Expect = 1.8e-33 Identity = 79/153 (51.63%), Postives = 105/153 (68.63%), Query Frame = 0
BLAST of MELO3C020751.2.1 vs. TAIR10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 85.1 bits (209), Expect = 4.1e-17 Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = 0
BLAST of MELO3C020751.2.1 vs. Swiss-Prot
Match: sp|O65695|SAU50_ARATH (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.4e-12 Identity = 39/101 (38.61%), Postives = 57/101 (56.44%), Query Frame = 0
BLAST of MELO3C020751.2.1 vs. Swiss-Prot
Match: sp|P32295|ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11 Identity = 29/62 (46.77%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of MELO3C020751.2.1 vs. Swiss-Prot
Match: sp|P33083|AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11 Identity = 35/77 (45.45%), Postives = 51/77 (66.23%), Query Frame = 0
BLAST of MELO3C020751.2.1 vs. Swiss-Prot
Match: sp|P33081|AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.9e-11 Identity = 33/67 (49.25%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of MELO3C020751.2.1 vs. Swiss-Prot
Match: sp|Q9LTV3|SAU72_ARATH (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.4e-11 Identity = 30/68 (44.12%), Postives = 43/68 (63.24%), Query Frame = 0
BLAST of MELO3C020751.2.1 vs. TrEMBL
Match: tr|A0A1S3C5H3|A0A1S3C5H3_CUCME (auxin-responsive protein SAUR64 OS=Cucumis melo OX=3656 GN=LOC103497270 PE=4 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 6.3e-81 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of MELO3C020751.2.1 vs. TrEMBL
Match: tr|A0A0A0LM48|A0A0A0LM48_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G257100 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 3.0e-75 Identity = 144/153 (94.12%), Postives = 146/153 (95.42%), Query Frame = 0
BLAST of MELO3C020751.2.1 vs. TrEMBL
Match: tr|M5VP66|M5VP66_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G082200 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 1.2e-50 Identity = 108/153 (70.59%), Postives = 126/153 (82.35%), Query Frame = 0
BLAST of MELO3C020751.2.1 vs. TrEMBL
Match: tr|A0A2I4E7C7|A0A2I4E7C7_9ROSI (indole-3-acetic acid-induced protein ARG7-like OS=Juglans regia OX=51240 GN=LOC108986945 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 1.3e-46 Identity = 102/153 (66.67%), Postives = 123/153 (80.39%), Query Frame = 0
BLAST of MELO3C020751.2.1 vs. TrEMBL
Match: tr|A0A2R6RHJ7|A0A2R6RHJ7_ACTCH (Auxin-responsive protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc07103 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.9e-45 Identity = 102/160 (63.75%), Postives = 122/160 (76.25%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
|