MELO3C020606T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C020606T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Zinc finger protein
Location	chr12 : 1472780 .. 1473355 (+)
Sequence length	576

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATTGATCAACAAGAAGATGCAAGCTGTGAGTATCAAGAACAAAGTGGTGTAAATCAATCAACAGCTAGGTCTTATGAGTGCAATTTTTGTAAACGAGGCTTCACAAATGCACAAGCTTTAGGAGGCCATATGAACATACATAGAAAAGAGAAGGCCAAGCTCAAGCAATCGATAACGACATCGTCGTTGTCGTCATCACCAAACAAGATGGTTGTAGATACCCCGAAGATGATGAGTACTCCAACAAGGTTTCCATGGGTCGTCATCTCACCATCTACTAGAGAAGAGCATGGTCGAAGCAATAGATGTGGTCTAGAAGAAACCCTAATTTCGGAAGAATTTCAACAACTCCCACTTTTCGTCGAAAATAATCCTTCAAATATAGATCAAAACTTGGAGATCCGTCAAGTTCTTCCGATCGAGGTTGATTGTGATTCAAAGCTAGGATCACCGTCTCGACATGGTTCTTCCGTCTCCGAGCTCGATCTTGAGCTTAGATTAGGACCTGAACCACAAAACTCGACCCCGTCAACATCACTCCCTACTGGTAGGACTACACATTTCTTTTGA

mRNA sequence

ATGGAAATTGATCAACAAGAAGATGCAAGCTGTGAGTATCAAGAACAAAGTGGTGTAAATCAATCAACAGCTAGGTCTTATGAGTGCAATTTTTGTAAACGAGGCTTCACAAATGCACAAGCTTTAGGAGGCCATATGAACATACATAGAAAAGAGAAGGCCAAGCTCAAGCAATCGATAACGACATCGTCGTTGTCGTCATCACCAAACAAGATGGTTGTAGATACCCCGAAGATGATGAGTACTCCAACAAGGTTTCCATGGGTCGTCATCTCACCATCTACTAGAGAAGAGCATGGTCGAAGCAATAGATGTGGTCTAGAAGAAACCCTAATTTCGGAAGAATTTCAACAACTCCCACTTTTCGTCGAAAATAATCCTTCAAATATAGATCAAAACTTGGAGATCCGTCAAGTTCTTCCGATCGAGGTTGATTGTGATTCAAAGCTAGGATCACCGTCTCGACATGGTTCTTCCGTCTCCGAGCTCGATCTTGAGCTTAGATTAGGACCTGAACCACAAAACTCGACCCCGTCAACATCACTCCCTACTGGTAGGACTACACATTTCTTTTGA

Coding sequence (CDS)

ATGGAAATTGATCAACAAGAAGATGCAAGCTGTGAGTATCAAGAACAAAGTGGTGTAAATCAATCAACAGCTAGGTCTTATGAGTGCAATTTTTGTAAACGAGGCTTCACAAATGCACAAGCTTTAGGAGGCCATATGAACATACATAGAAAAGAGAAGGCCAAGCTCAAGCAATCGATAACGACATCGTCGTTGTCGTCATCACCAAACAAGATGGTTGTAGATACCCCGAAGATGATGAGTACTCCAACAAGGTTTCCATGGGTCGTCATCTCACCATCTACTAGAGAAGAGCATGGTCGAAGCAATAGATGTGGTCTAGAAGAAACCCTAATTTCGGAAGAATTTCAACAACTCCCACTTTTCGTCGAAAATAATCCTTCAAATATAGATCAAAACTTGGAGATCCGTCAAGTTCTTCCGATCGAGGTTGATTGTGATTCAAAGCTAGGATCACCGTCTCGACATGGTTCTTCCGTCTCCGAGCTCGATCTTGAGCTTAGATTAGGACCTGAACCACAAAACTCGACCCCGTCAACATCACTCCCTACTGGTAGGACTACACATTTCTTTTGA

Protein sequence

MEIDQQEDASCEYQEQSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSITTSSLSSSPNKMVVDTPKMMSTPTRFPWVVISPSTREEHGRSNRCGLEETLISEEFQQLPLFVENNPSNIDQNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTPSTSLPTGRTTHFF*

Homology

[Close]

BLAST of MELO3C020606T1 vs. Swiss-Prot
Match: TAC1_ARATH (Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.3e-13
Identity = 54/157 (34.39%), Postives = 82/157 (52.23%), Query Frame = 1


Query: 19  VNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSITTSSLSSSPNKMVV--DT 78
           +NQS  RSY C+FC RGF+NAQALGGHMNIHR+++AKL+Q +    +  + + +V   D 
Sbjct: 29  LNQS--RSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQKL----MEDNKDDVVAESDA 88

Query: 79  PKMMSTPTRFPWVVISPSTREEHGRSNRCGLEETLISEEF---QQLPLFVENNPSNIDQN 138
            +++S              +++ G +  C   +  +  +    Q+L  +V+   S +D N
Sbjct: 89  SEVVSLDLN--------EQQQQQGEALTCDDHDQYVDNDISPKQKLEFWVQE--SKLDTN 148

Query: 139 LEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLG 171
            +  +V    +D     GS S H   +  LDLELRLG
Sbjct: 149 -DHGKVTEASID-----GSSSSHHRDIEVLDLELRLG 163

[Close]

BLAST of MELO3C020606T1 vs. Swiss-Prot
Match: SUP_ARATH (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.6e-12
Identity = 55/168 (32.74%), Postives = 81/168 (48.21%), Query Frame = 1


Query: 25  RSYECNFCKRGFTNAQALGGHMNIHRKEKAKLK--QSITTSSLSSSP--------NKMVV 84
           RSY C+FCKR F +AQALGGHMN+HR+++A+L+  QS ++SS  S P        + M  
Sbjct: 45  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNYSYSTMAN 104

Query: 85  DTPKMMSTPTRFP------------WVVISPSTREEHGRSNRCGLEETLISEEFQQLPLF 144
             P   S  T FP             ++ S S + +H   N C  +++ +  E  +   F
Sbjct: 105 SPPPHHSPLTLFPTLSPPSSPRYRAGLIRSLSPKSKHTPENACKTKKSSLLVEAGEATRF 164

Query: 145 VENNPSNIDQNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLG 171
              +   I +N EI       +  + ++G  +    S  +LDLELRLG
Sbjct: 165 TSKDACKILRNDEI-------ISLELEIGLIN---ESEQDLDLELRLG 202

[Close]

BLAST of MELO3C020606T1 vs. Swiss-Prot
Match: RBE_ARATH (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 3.7e-09
Identity = 60/193 (31.09%), Postives = 87/193 (45.08%), Query Frame = 1


Query: 4   DQQEDASCEYQEQSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLK-QSITT 63
           +++  AS E     G      RSY C+FC R F +AQALGGHMN+HR+++A+LK QS++ 
Sbjct: 32  EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSP 91

Query: 64  SSLSSSP------NKMVVD--TPKMMSTPTRFP-------------WVVISPSTREEHGR 123
           SS   +        + V+D  +  ++   TR P              V+ S   R EH  
Sbjct: 92  SSTDQATPPECDRQQQVLDVGSKVLVQEETRKPNGTKREISDVCNNNVLESSMKRYEHDN 151

Query: 124 SN-RCGLEETLISEEFQQLPLFVENNPSNIDQNLEIRQVLPIEVDCDSKLGSPSRHGSSV 174
              +  L   L+S EF      + N  S+  +  +   V    +     +G    +G   
Sbjct: 152 GEVKTDLSVGLLSTEFDPRKKQLINGSSSSWKRAK-TDVSRFPMMLGLVIGISEINGHH- 211

[Close]

BLAST of MELO3C020606T1 vs. Swiss-Prot
Match: ZFP6_ARATH (Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.9e-08
Identity = 37/106 (34.91%), Postives = 53/106 (50.00%), Query Frame = 1


Query: 1   MEIDQQEDASCEYQEQSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLK--Q 60
           +E    ++ S E +  SG + S +R YEC +C R F N+QALGGH N H+KE+  LK  Q
Sbjct: 16  LETTSVQNQSSEPRPGSG-SGSESRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQ 75

Query: 61  SITTSSLSSSPN---------KMVVDTPKMMSTPTRFPWVVISPST 96
            + T  L    N               P ++S P   P +++SPS+
Sbjct: 76  MLATRGLPRHHNFHPHTNPLLSAFAPLPHLLSQPHPPPHMMLSPSS 120

[Close]

BLAST of MELO3C020606T1 vs. TrEMBL
Match: A0A0A0LXG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G524710 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 2.1e-96
Identity = 181/192 (94.27%), Postives = 186/192 (96.88%), Query Frame = 1


Query: 1   MEIDQQEDASCEYQE-QSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60
           MEIDQQEDASCEYQE QSGVNQST RSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS
Sbjct: 1   MEIDQQEDASCEYQEEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60

Query: 61  ITTSSLSSSPNKMVVDTPKMMSTPTRFPWVVISPSTREEHGRSNRCGLEETLISEEFQQL 120
           ITTSSLSSSPNKMVVDTPKMMSTPTR PWVVISPSTR+EHGRS + GLEETLISEEFQQL
Sbjct: 61  ITTSSLSSSPNKMVVDTPKMMSTPTRLPWVVISPSTRKEHGRS-KGGLEETLISEEFQQL 120

Query: 121 PLFVENNPSNIDQNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTPS 180
           PLFVENNPSN+DQNLEIRQVLPI+VDCDSKLGSPSRHGSSVSELDLELRLGPEPQNST S
Sbjct: 121 PLFVENNPSNMDQNLEIRQVLPIDVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTSS 180

Query: 181 TSLPTGRTTHFF 192
           +SLPTGRTTHFF
Sbjct: 181 SSLPTGRTTHFF 191

[Close]

BLAST of MELO3C020606T1 vs. TrEMBL
Match: K9JIE8_MALDO (C2H2 type single zinc finger protein OS=Malus domestica GN=SUP3 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.1e-23
Identity = 82/186 (44.09%), Postives = 108/186 (58.06%), Query Frame = 1


Query: 14  QEQSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSITTSSLSS------ 73
           Q+Q G ++  A+SYECNFCKRGFTNAQALGGHMNIHRK+KAKLKQ  +++++ +      
Sbjct: 20  QQQQGASKQAAKSYECNFCKRGFTNAQALGGHMNIHRKDKAKLKQVSSSNTIETKHHHQQ 79

Query: 74  SPNKMVVDTPKMMSTPTRFPWVVISPSTREEHGRS-NRCGLEET---LISEE----FQQL 133
              + V+D PKM S  +     + S    +  GR  +R  +      LISE+     QQL
Sbjct: 80  QQKQNVLDFPKMPSLDSPILPTINSLQHNKPIGRDIDRNTIRAPWPWLISEKSDTTMQQL 139

Query: 134 PLFVENNPSNID-QNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTP 185
            LF +    N D QN    QV   +++   +L        S SELDLELRLGPEPQNS+ 
Sbjct: 140 ALFSQTPSHNKDHQNPGTPQVHGDQLENSLQL--------SGSELDLELRLGPEPQNSSS 197

[Close]

BLAST of MELO3C020606T1 vs. TrEMBL
Match: C6T579_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.1e-23
Identity = 79/195 (40.51%), Postives = 101/195 (51.79%), Query Frame = 1


Query: 1   MEIDQQEDASCEYQ----EQSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKL 60
           ME D   +A+ +      E+ G +  T+RSYECNFC+RGF+NAQALGGHMNIHRK+KAKL
Sbjct: 1   MESDHHHEAASDNHPSDGEEQGASHVTSRSYECNFCRRGFSNAQALGGHMNIHRKDKAKL 60

Query: 61  KQSITTSSLSSSPNKMVVDTPKMMSTPTRFPWVVISPSTREEHGRSNRCGLEETLISEEF 120
           KQ  +++ +   P K   +     S    + W V SP     H R               
Sbjct: 61  KQQQSSNQIQQDPAKSGGEE----SNKPNWNWNV-SPQEHVIHKR--------------- 120

Query: 121 QQLPLFVENNPSNIDQNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNS 180
            QLPLF E   S+  Q  +       +    ++L   S H  S SELDLELRLGPEPQNS
Sbjct: 121 HQLPLFAETPTSSETQKPQ------GQTQTTTELTLLSTHQDSSSELDLELRLGPEPQNS 164

Query: 181 TPSTSLPTGRTTHFF 192
           +  T      T +FF
Sbjct: 181 SAETD-----TRNFF 164

[Close]

BLAST of MELO3C020606T1 vs. TrEMBL
Match: A0A151RS13_CAJCA (Transcriptional regulator SUPERMAN OS=Cajanus cajan GN=KK1_033193 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.4e-22
Identity = 72/167 (43.11%), Postives = 92/167 (55.09%), Query Frame = 1


Query: 15  EQSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSITTSSLSSSPNK--- 74
           E  G +  T+RSYECNFC+RGF+NAQALGGHMNIHRK+KAKLKQ       SS  N+   
Sbjct: 19  EDQGASHVTSRSYECNFCRRGFSNAQALGGHMNIHRKDKAKLKQQQQQQQQSSISNQTEP 78

Query: 75  ---MVVDTPKMMSTPTRFPWVVISPSTREEHGRSNRCGLEETLISEEFQQLPLFVENNPS 134
               V+   + MS    + W V   S+++EH  S          +   +QLPLF E+  S
Sbjct: 79  SLDKVIPQDQAMSGEANWNWNV---SSQQEHASSR---------AIHTKQLPLFAESPTS 138

Query: 135 NIDQNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQN 176
           +  QN  + Q         ++     R  SS  ELDLELRLGPEPQ+
Sbjct: 139 SETQNSPLGQT-------TTEQTLLPRQDSSSEELDLELRLGPEPQD 166

[Close]

BLAST of MELO3C020606T1 vs. TrEMBL
Match: I1LQL5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G059500 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.9e-22
Identity = 77/195 (39.49%), Postives = 100/195 (51.28%), Query Frame = 1


Query: 1   MEIDQQEDASCEYQ----EQSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKL 60
           ME D   +A+ +      E+ G +  T+RSYECNFC+RGF+NAQALGGHMNIHRK+KAKL
Sbjct: 1   MESDHHHEAASDNHPSDGEEQGASHVTSRSYECNFCRRGFSNAQALGGHMNIHRKDKAKL 60

Query: 61  KQSITTSSLSSSPNKMVVDTPKMMSTPTRFPWVVISPSTREEHGRSNRCGLEETLISEEF 120
           KQ  +++ +   P K   +     S    + W V SP     H R               
Sbjct: 61  KQQQSSNQIQQDPAKSGGEE----SNKPNWNWNV-SPQEHVIHKR--------------- 120

Query: 121 QQLPLFVENNPSNIDQNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNS 180
            QLPLF E   S+  Q  +       +    ++    S H  S SELDLELRLGPEPQ+S
Sbjct: 121 HQLPLFAETPTSSETQKPQ------GQTQTTTEQTLLSTHQDSSSELDLELRLGPEPQDS 164

Query: 181 TPSTSLPTGRTTHFF 192
           +  T      T +FF
Sbjct: 181 SAETD-----TRNFF 164

[Close]

BLAST of MELO3C020606T1 vs. TAIR10
Match: AT3G09290.1 (AT3G09290.1 telomerase activator1)

HSP 1 Score: 75.1 bits (183), Expect = 5.3e-14
Identity = 54/157 (34.39%), Postives = 82/157 (52.23%), Query Frame = 1


Query: 19  VNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSITTSSLSSSPNKMVV--DT 78
           +NQS  RSY C+FC RGF+NAQALGGHMNIHR+++AKL+Q +    +  + + +V   D 
Sbjct: 29  LNQS--RSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQKL----MEDNKDDVVAESDA 88

Query: 79  PKMMSTPTRFPWVVISPSTREEHGRSNRCGLEETLISEEF---QQLPLFVENNPSNIDQN 138
            +++S              +++ G +  C   +  +  +    Q+L  +V+   S +D N
Sbjct: 89  SEVVSLDLN--------EQQQQQGEALTCDDHDQYVDNDISPKQKLEFWVQE--SKLDTN 148

Query: 139 LEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLG 171
            +  +V    +D     GS S H   +  LDLELRLG
Sbjct: 149 -DHGKVTEASID-----GSSSSHHRDIEVLDLELRLG 163

[Close]

BLAST of MELO3C020606T1 vs. TAIR10
Match: AT3G23130.1 (AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 72.8 bits (177), Expect = 2.6e-13
Identity = 55/168 (32.74%), Postives = 81/168 (48.21%), Query Frame = 1


Query: 25  RSYECNFCKRGFTNAQALGGHMNIHRKEKAKLK--QSITTSSLSSSP--------NKMVV 84
           RSY C+FCKR F +AQALGGHMN+HR+++A+L+  QS ++SS  S P        + M  
Sbjct: 45  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNYSYSTMAN 104

Query: 85  DTPKMMSTPTRFP------------WVVISPSTREEHGRSNRCGLEETLISEEFQQLPLF 144
             P   S  T FP             ++ S S + +H   N C  +++ +  E  +   F
Sbjct: 105 SPPPHHSPLTLFPTLSPPSSPRYRAGLIRSLSPKSKHTPENACKTKKSSLLVEAGEATRF 164

Query: 145 VENNPSNIDQNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLG 171
              +   I +N EI       +  + ++G  +    S  +LDLELRLG
Sbjct: 165 TSKDACKILRNDEI-------ISLELEIGLIN---ESEQDLDLELRLG 202

[Close]

BLAST of MELO3C020606T1 vs. TAIR10
Match: AT3G53820.1 (AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11
Identity = 54/170 (31.76%), Postives = 77/170 (45.29%), Query Frame = 1


Query: 22  STARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQ----------SITTSSLSSSPNK 81
           S AR Y C FC+RGF+NAQALGGHMNIHRK++AKL+Q          +I T+S +    +
Sbjct: 16  SQARPYICEFCERGFSNAQALGGHMNIHRKDRAKLRQANLKEEDSEDAICTTSRNRFGQE 75

Query: 82  MVVDTPKMMSTPTRFPWVVISPSTREEHGRSNRCGLEETLISEEFQQLPLFVENNPSNID 141
           + ++ P  + T        + P  + E  +S     E+ L  EE + + +          
Sbjct: 76  L-IELPFFVDT--------VGPRRKGEDDKS-----EKGLGDEEKKNMRI---------- 135

Query: 142 QNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTPSTS 182
               +++ L    D                 +DLELRLG +P   T STS
Sbjct: 136 ----LQKALSQSADV----------------IDLELRLGLDPYKKTTSTS 141

[Close]

BLAST of MELO3C020606T1 vs. TAIR10
Match: AT4G17810.1 (AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 65.9 bits (159), Expect = 3.2e-11
Identity = 51/168 (30.36%), Postives = 74/168 (44.05%), Query Frame = 1


Query: 25  RSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQ---SITTSSLSSSPNKMVVDTPKMMS 84
           RSY CNFC+R F +AQALGGHMN+HR+++A  +    S   ++  S    M++++    +
Sbjct: 44  RSYTCNFCRREFRSAQALGGHMNVHRRDRASSRAHQGSTVAAAARSGHGGMLLNS---CA 103

Query: 85  TPTRFPWVVISPSTREEHGRSNRCGLEET---------------LISEEFQQLPLFVENN 144
            P     ++I  +     G S+   L+                   S     LP  + N+
Sbjct: 104 PPLPTTTLIIQSTASNIEGLSHFYQLQNPSGIFGNSGDMVNLYGTTSFPPSNLPFSMLNS 163

Query: 145 PSNIDQNLEIRQVLPIEVDCDSKLGS-PSRHGSSVSELDLELRLGPEP 174
           P  +   L     +      D  +GS     G+SV ELDLELRLG  P
Sbjct: 164 PVEVPPRL-----IEYSTGDDESIGSMKEATGTSVDELDLELRLGHHP 203

[Close]

BLAST of MELO3C020606T1 vs. TAIR10
Match: AT5G43540.1 (AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10
Identity = 27/37 (72.97%), Postives = 29/37 (78.38%), Query Frame = 1


Query: 17 SGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEK 54
          S V+  T R YEC FCKRGFTNAQALGGHMNIHR+++
Sbjct: 25 SSVSTVTRRMYECTFCKRGFTNAQALGGHMNIHRRDR 61

[Close]

BLAST of MELO3C020606T1 vs. NCBI nr
Match: gi|659115221|ref|XP_008457447.1| (PREDICTED: transcriptional regulator TAC1-like [Cucumis melo])

HSP 1 Score: 389.4 bits (999), Expect = 3.6e-105
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 1


Query: 1   MEIDQQEDASCEYQEQSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSI 60
           MEIDQQEDASCEYQEQSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSI
Sbjct: 1   MEIDQQEDASCEYQEQSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSI 60

Query: 61  TTSSLSSSPNKMVVDTPKMMSTPTRFPWVVISPSTREEHGRSNRCGLEETLISEEFQQLP 120
           TTSSLSSSPNKMVVDTPKMMSTPTRFPWVVISPSTREEHGRSNRCGLEETLISEEFQQLP
Sbjct: 61  TTSSLSSSPNKMVVDTPKMMSTPTRFPWVVISPSTREEHGRSNRCGLEETLISEEFQQLP 120

Query: 121 LFVENNPSNIDQNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTPST 180
           LFVENNPSNIDQNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTPST
Sbjct: 121 LFVENNPSNIDQNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTPST 180

Query: 181 SLPTGRTTHFF 192
           SLPTGRTTHFF
Sbjct: 181 SLPTGRTTHFF 191

[Close]

BLAST of MELO3C020606T1 vs. NCBI nr
Match: gi|449455176|ref|XP_004145329.1| (PREDICTED: transcriptional regulator TAC1-like [Cucumis sativus])

HSP 1 Score: 359.8 bits (922), Expect = 3.0e-96
Identity = 181/192 (94.27%), Postives = 186/192 (96.88%), Query Frame = 1


Query: 1   MEIDQQEDASCEYQE-QSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60
           MEIDQQEDASCEYQE QSGVNQST RSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS
Sbjct: 1   MEIDQQEDASCEYQEEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60

Query: 61  ITTSSLSSSPNKMVVDTPKMMSTPTRFPWVVISPSTREEHGRSNRCGLEETLISEEFQQL 120
           ITTSSLSSSPNKMVVDTPKMMSTPTR PWVVISPSTR+EHGRS + GLEETLISEEFQQL
Sbjct: 61  ITTSSLSSSPNKMVVDTPKMMSTPTRLPWVVISPSTRKEHGRS-KGGLEETLISEEFQQL 120

Query: 121 PLFVENNPSNIDQNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTPS 180
           PLFVENNPSN+DQNLEIRQVLPI+VDCDSKLGSPSRHGSSVSELDLELRLGPEPQNST S
Sbjct: 121 PLFVENNPSNMDQNLEIRQVLPIDVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTSS 180

Query: 181 TSLPTGRTTHFF 192
           +SLPTGRTTHFF
Sbjct: 181 SSLPTGRTTHFF 191

[Close]

BLAST of MELO3C020606T1 vs. NCBI nr
Match: gi|657952257|ref|XP_008356748.1| (PREDICTED: probable transcriptional regulator RABBIT EARS [Malus domestica])

HSP 1 Score: 117.5 bits (293), Expect = 2.6e-23
Identity = 82/186 (44.09%), Postives = 109/186 (58.60%), Query Frame = 1


Query: 14  QEQSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSITTSSLSSSPNKM- 73
           Q+Q G ++  A+SYECNFCKRGFTNAQALGGHMNIHRK+KAKLKQ  +++++ +  ++  
Sbjct: 20  QQQQGASKQAAKSYECNFCKRGFTNAQALGGHMNIHRKDKAKLKQVSSSNTIETKHHQQQ 79

Query: 74  -----VVDTPKMMSTPTRFPWVVISPSTREEHGRS-NRCGLEET---LISEE----FQQL 133
                V+D PKM S  +     + S    +  GR  +R  +      LISE+     QQL
Sbjct: 80  QQKQNVLDFPKMPSLDSPILPTINSLQHNKPIGRDIDRNTIRAPWPWLISEKSDTTMQQL 139

Query: 134 PLFVENNPSNID-QNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTP 185
            LF +    N D QN    QV   +++   +L        S SELDLELRLGPEPQNS+ 
Sbjct: 140 ALFSQTPSHNKDHQNPGTPQVHGDQLENSLQL--------SGSELDLELRLGPEPQNSSS 197

[Close]

BLAST of MELO3C020606T1 vs. NCBI nr
Match: gi|315258339|gb|ADT91715.1| (C2H2 type single zinc finger protein [Malus domestica])

HSP 1 Score: 116.7 bits (291), Expect = 4.5e-23
Identity = 82/186 (44.09%), Postives = 108/186 (58.06%), Query Frame = 1


Query: 14  QEQSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSITTSSLSS------ 73
           Q+Q G ++  A+SYECNFCKRGFTNAQALGGHMNIHRK+KAKLKQ  +++++ +      
Sbjct: 20  QQQQGASKQAAKSYECNFCKRGFTNAQALGGHMNIHRKDKAKLKQVSSSNTIETKHHHQQ 79

Query: 74  SPNKMVVDTPKMMSTPTRFPWVVISPSTREEHGRS-NRCGLEET---LISEE----FQQL 133
              + V+D PKM S  +     + S    +  GR  +R  +      LISE+     QQL
Sbjct: 80  QQKQNVLDFPKMPSLDSPILPTINSLQHNKPIGRDIDRNTIRAPWPWLISEKSDTTMQQL 139

Query: 134 PLFVENNPSNID-QNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTP 185
            LF +    N D QN    QV   +++   +L        S SELDLELRLGPEPQNS+ 
Sbjct: 140 ALFSQTPSHNKDHQNPGTPQVHGDQLENSLQL--------SGSELDLELRLGPEPQNSSS 197

[Close]

BLAST of MELO3C020606T1 vs. NCBI nr
Match: gi|351722462|ref|NP_001236477.1| (uncharacterized protein LOC100527724 [Glycine max])

HSP 1 Score: 116.7 bits (291), Expect = 4.5e-23
Identity = 79/195 (40.51%), Postives = 101/195 (51.79%), Query Frame = 1


Query: 1   MEIDQQEDASCEYQ----EQSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKL 60
           ME D   +A+ +      E+ G +  T+RSYECNFC+RGF+NAQALGGHMNIHRK+KAKL
Sbjct: 1   MESDHHHEAASDNHPSDGEEQGASHVTSRSYECNFCRRGFSNAQALGGHMNIHRKDKAKL 60

Query: 61  KQSITTSSLSSSPNKMVVDTPKMMSTPTRFPWVVISPSTREEHGRSNRCGLEETLISEEF 120
           KQ  +++ +   P K   +     S    + W V SP     H R               
Sbjct: 61  KQQQSSNQIQQDPAKSGGEE----SNKPNWNWNV-SPQEHVIHKR--------------- 120

Query: 121 QQLPLFVENNPSNIDQNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNS 180
            QLPLF E   S+  Q  +       +    ++L   S H  S SELDLELRLGPEPQNS
Sbjct: 121 HQLPLFAETPTSSETQKPQ------GQTQTTTELTLLSTHQDSSSELDLELRLGPEPQNS 164

Query: 181 TPSTSLPTGRTTHFF 192
           +  T      T +FF
Sbjct: 181 SAETD-----TRNFF 164

The following BLAST results are available for this feature:

BLAST of MELO3C020606T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TAC1_ARATH	9.3e-13	34.39	Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1	[more]
SUP_ARATH	4.6e-12	32.74	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1	[more]
RBE_ARATH	3.7e-09	31.09	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE...	[more]
ZFP6_ARATH	6.9e-08	34.91	Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1	[more]

BLAST of MELO3C020606T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXG2_CUCSA	2.1e-96	94.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G524710 PE=4 SV=1	[more]
K9JIE8_MALDO	3.1e-23	44.09	C2H2 type single zinc finger protein OS=Malus domestica GN=SUP3 PE=2 SV=1	[more]
C6T579_SOYBN	3.1e-23	40.51	Putative uncharacterized protein OS=Glycine max PE=2 SV=1	[more]
A0A151RS13_CAJCA	3.4e-22	43.11	Transcriptional regulator SUPERMAN OS=Cajanus cajan GN=KK1_033193 PE=4 SV=1	[more]
I1LQL5_SOYBN	5.9e-22	39.49	Uncharacterized protein OS=Glycine max GN=GLYMA_12G059500 PE=4 SV=1	[more]

BLAST of MELO3C020606T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G09290.1	5.3e-14	34.39	telomerase activator1	[more]
AT3G23130.1	2.6e-13	32.74	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G53820.1	1.9e-11	31.76	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT4G17810.1	3.2e-11	30.36	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G43540.1	1.2e-10	72.97	C2H2 and C2HC zinc fingers superfamily protein	[more]

BLAST of MELO3C020606T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115221\|ref\|XP_008457447.1\|	3.6e-105	100.00	PREDICTED: transcriptional regulator TAC1-like [Cucumis melo]	[more]
gi\|449455176\|ref\|XP_004145329.1\|	3.0e-96	94.27	PREDICTED: transcriptional regulator TAC1-like [Cucumis sativus]	[more]
gi\|657952257\|ref\|XP_008356748.1\|	2.6e-23	44.09	PREDICTED: probable transcriptional regulator RABBIT EARS [Malus domestica]	[more]
gi\|315258339\|gb\|ADT91715.1\|	4.5e-23	44.09	C2H2 type single zinc finger protein [Malus domestica]	[more]
gi\|351722462\|ref\|NP_001236477.1\|	4.5e-23	40.51	uncharacterized protein LOC100527724 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007087	Zinc finger, C2H2
IPR013087	Znf_C2H2_type

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C020606	MELO3C020606	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C020606T1	MELO3C020606T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C020606T1.cds1	MELO3C020606T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 29..49 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 27..54 score: 1
IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain	GENE3D	G3DSA:3.30.160.60		coord: 25..53 score: 4.
None	No IPR available	PANTHER	PTHR26374	FAMILY NOT NAMED	coord: 24..185 score: 2.7
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 25..54 score: 1.9