MELO3C020407T3 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C020407T3
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Nuclear pore complex protein Nup160
Location	chr5 : 9587974 .. 9588814 (-)
Sequence length	444

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGATTGGTTTACTCCATGATGACACATCGAGAATAAAACTTGAGTTAATTCCAATGATTGAGGAAATTATTTGTGAGTGGCACATTATTAATTTCCTTGCTATCACGCCATCTGAGTCAGCTGCAGTTGAGGATTTTAGTTCTCAACTTTCACTGTTACAAATCGGTAGGTGTAAGGTGGTTGTTGCTGGTATTATCATCCGAGCATTTTCTTTCAGTATTTCTTGCTTGTCATTGAAGAGTTTGTGTTCTTACTCTGTTGTGCATTTTAAAGGAAGCACAAATAAAACTTTAAGAGCACATTTTTCGTTGTTTCTGTTACACTGCTCACACCAAGAGATCATTTTTAGGACAAAATTGATGTGGCAACTGGCATCTGATTGCATCATATTATCTAGCCTTCAAGTTACAATTTTAAAAACCTAACATAGATAAATATGACTTCGATTGACGTTGAAATTGTGATTCTGGGTGGAAATATAAATGCTGCTGATTTTTGAAATGATATCACTATTCTAGTTTTTGTCATTTATTTAGTATTTTAAATGTTCATCCTGTTACAGATACTTATGGAGGTAAAGAAATATGGAAGGGGAAGCTTGGAAAATGCGACTTTACATTGGCTTCTTTACTTCTGTTAAAGATGAATTCTTCAGCTGAAGGGCCGGTCTACCTGTCTACCAAATGTCTTCTCAATCCGCAGGACATTGTTCTTGCAACACAAAATTTTACCAGCTGGATTATTTGGGGGAGCAGTAGAGAACCTTCAGCTTTTTTAAATACTTCAACTGAGCTTGCTGTGGTACTGCTAAGGCATGGCCAATATGATGCTGTTGAG

mRNA sequence

ATGCAGATTGGTTTACTCCATGATGACACATCGAGAATAAAACTTGAGTTAATTCCAATGATTGAGGAAATTATTTGTGAGTGGCACATTATTAATTTCCTTGCTATCACGCCATCTGAGTCAGCTGCAGTTGAGGATTTTAGTTCTCAACTTTCACTGTTACAAATCGATACTTATGGAGGTAAAGAAATATGGAAGGGGAAGCTTGGAAAATGCGACTTTACATTGGCTTCTTTACTTCTGTTAAAGATGAATTCTTCAGCTGAAGGGCCGGTCTACCTGTCTACCAAATGTCTTCTCAATCCGCAGGACATTGTTCTTGCAACACAAAATTTTACCAGCTGGATTATTTGGGGGAGCAGTAGAGAACCTTCAGCTTTTTTAAATACTTCAACTGAGCTTGCTGTGGTACTGCTAAGGCATGGCCAATATGATGCTGTTGAG

Coding sequence (CDS)

ATGCAGATTGGTTTACTCCATGATGACACATCGAGAATAAAACTTGAGTTAATTCCAATGATTGAGGAAATTATTTGTGAGTGGCACATTATTAATTTCCTTGCTATCACGCCATCTGAGTCAGCTGCAGTTGAGGATTTTAGTTCTCAACTTTCACTGTTACAAATCGATACTTATGGAGGTAAAGAAATATGGAAGGGGAAGCTTGGAAAATGCGACTTTACATTGGCTTCTTTACTTCTGTTAAAGATGAATTCTTCAGCTGAAGGGCCGGTCTACCTGTCTACCAAATGTCTTCTCAATCCGCAGGACATTGTTCTTGCAACACAAAATTTTACCAGCTGGATTATTTGGGGGAGCAGTAGAGAACCTTCAGCTTTTTTAAATACTTCAACTGAGCTTGCTGTGGTACTGCTAAGGCATGGCCAATATGATGCTGTTGAG

Protein sequence

MQIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGGKEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSSREPSAFLNTSTELAVVLLRHGQYDAVE

Homology

[Close]

BLAST of MELO3C020407T3 vs. Swiss-Prot
Match: NU160_ARATH (Nuclear pore complex protein NUP160 OS=Arabidopsis thaliana GN=NUP160 PE=1 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 9.1e-24
Identity = 63/148 (42.57%), Postives = 89/148 (60.14%), Query Frame = 1


Query: 2   QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG 61
           Q+ +   D  +++LEL+PMI++I+ EW II F   TP+ES ++EDFS +LS LQID+   
Sbjct: 721 QVNMSQQDICKLRLELLPMIQDIVSEWLIILFFVTTPAESTSMEDFSLKLSSLQIDSSID 780

Query: 62  KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWG-S 121
           K  W   LGKC F+LA +LL    S      + + + L + Q I    QNF SWI +  +
Sbjct: 781 KRSWNAMLGKCGFSLAFILLFSDRSCIVDGRF-NLRYLPSSQIITSLVQNFISWIRYSKT 840

Query: 122 SREPSAFLNTSTELAVVLLRHGQYDAVE 149
             + S+ L  STEL++ L+R+GQ DAVE
Sbjct: 841 GDDSSSLLRRSTELSLRLIRNGQSDAVE 867

[Close]

BLAST of MELO3C020407T3 vs. TrEMBL
Match: A0A0A0LI10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G149490 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.4e-76
Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 1


Query: 2   QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG 61
           QIGLLHDDTSR+KLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG
Sbjct: 341 QIGLLHDDTSRVKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG 400

Query: 62  KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS 121
           KEIWKGKLGKCDFTLASLLLLKMNSS EGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS
Sbjct: 401 KEIWKGKLGKCDFTLASLLLLKMNSSTEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS 460

Query: 122 REPSAFLNTSTELAVVLLRHGQYDAVE 149
           REPSAFLNTSTELAVVLLRHGQYDAVE
Sbjct: 461 REPSAFLNTSTELAVVLLRHGQYDAVE 487

[Close]

BLAST of MELO3C020407T3 vs. TrEMBL
Match: A0A061GAH6_THECC (Suppressor of auxin resistance1, putative OS=Theobroma cacao GN=TCM_028019 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.0e-42
Identity = 95/148 (64.19%), Postives = 110/148 (74.32%), Query Frame = 1


Query: 2   QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG 61
           QI + HDD SRI+LEL+PMI+EII EW II F + TPSES A EDFSSQLSLLQID    
Sbjct: 713 QINMTHDDISRIQLELVPMIDEIISEWLIILFFSTTPSESPATEDFSSQLSLLQIDNNIN 772

Query: 62  KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS 121
           K  W  KLGKCDFTLASLLLL   SS+     LS  CL +P D++ + Q FTSWI+WG++
Sbjct: 773 KRSWIEKLGKCDFTLASLLLLNSQSSSGYERCLSLGCLPDPHDVISSVQKFTSWIVWGNT 832

Query: 122 RE-PSAFLNTSTELAVVLLRHGQYDAVE 149
            E  S+FL  STELA+VLLRHGQYDAVE
Sbjct: 833 GEVSSSFLRRSTELAIVLLRHGQYDAVE 860

[Close]

BLAST of MELO3C020407T3 vs. TrEMBL
Match: A0A0D2R291_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G307100 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.0e-42
Identity = 91/148 (61.49%), Postives = 112/148 (75.68%), Query Frame = 1


Query: 2   QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG 61
           QI ++HDD +RI+++L+PMIEEII EW II     TPSES A+EDFSSQLSLLQID    
Sbjct: 710 QINMVHDDITRIQVDLVPMIEEIISEWLIILVFCTTPSESPAIEDFSSQLSLLQIDNKIN 769

Query: 62  KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS 121
           K  W+ KLGKCDFTLASLLLL   SS+    +LS  CLLNP +I+ + Q F SWI+WG++
Sbjct: 770 KRSWREKLGKCDFTLASLLLLNNQSSSGYERHLSLGCLLNPHEIITSVQKFASWIVWGNT 829

Query: 122 RE-PSAFLNTSTELAVVLLRHGQYDAVE 149
            E  S+FL  STELA++LLR+GQYDAVE
Sbjct: 830 GEVSSSFLRRSTELAIILLRNGQYDAVE 857

[Close]

BLAST of MELO3C020407T3 vs. TrEMBL
Match: A0A0D2PHF8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G307100 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.0e-42
Identity = 91/148 (61.49%), Postives = 112/148 (75.68%), Query Frame = 1


Query: 2   QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG 61
           QI ++HDD +RI+++L+PMIEEII EW II     TPSES A+EDFSSQLSLLQID    
Sbjct: 710 QINMVHDDITRIQVDLVPMIEEIISEWLIILVFCTTPSESPAIEDFSSQLSLLQIDNKIN 769

Query: 62  KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS 121
           K  W+ KLGKCDFTLASLLLL   SS+    +LS  CLLNP +I+ + Q F SWI+WG++
Sbjct: 770 KRSWREKLGKCDFTLASLLLLNNQSSSGYERHLSLGCLLNPHEIITSVQKFASWIVWGNT 829

Query: 122 RE-PSAFLNTSTELAVVLLRHGQYDAVE 149
            E  S+FL  STELA++LLR+GQYDAVE
Sbjct: 830 GEVSSSFLRRSTELAIILLRNGQYDAVE 857

[Close]

BLAST of MELO3C020407T3 vs. TrEMBL
Match: A0A0D2TPJ3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G307100 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.0e-42
Identity = 91/148 (61.49%), Postives = 112/148 (75.68%), Query Frame = 1


Query: 2   QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG 61
           QI ++HDD +RI+++L+PMIEEII EW II     TPSES A+EDFSSQLSLLQID    
Sbjct: 643 QINMVHDDITRIQVDLVPMIEEIISEWLIILVFCTTPSESPAIEDFSSQLSLLQIDNKIN 702

Query: 62  KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS 121
           K  W+ KLGKCDFTLASLLLL   SS+    +LS  CLLNP +I+ + Q F SWI+WG++
Sbjct: 703 KRSWREKLGKCDFTLASLLLLNNQSSSGYERHLSLGCLLNPHEIITSVQKFASWIVWGNT 762

Query: 122 RE-PSAFLNTSTELAVVLLRHGQYDAVE 149
            E  S+FL  STELA++LLR+GQYDAVE
Sbjct: 763 GEVSSSFLRRSTELAIILLRNGQYDAVE 790

[Close]

BLAST of MELO3C020407T3 vs. TAIR10
Match: AT1G33410.1 (AT1G33410.1 SUPPRESSOR OF AUXIN RESISTANCE1)

HSP 1 Score: 111.3 bits (277), Expect = 5.1e-25
Identity = 63/148 (42.57%), Postives = 89/148 (60.14%), Query Frame = 1


Query: 2   QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG 61
           Q+ +   D  +++LEL+PMI++I+ EW II F   TP+ES ++EDFS +LS LQID+   
Sbjct: 721 QVNMSQQDICKLRLELLPMIQDIVSEWLIILFFVTTPAESTSMEDFSLKLSSLQIDSSID 780

Query: 62  KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWG-S 121
           K  W   LGKC F+LA +LL    S      + + + L + Q I    QNF SWI +  +
Sbjct: 781 KRSWNAMLGKCGFSLAFILLFSDRSCIVDGRF-NLRYLPSSQIITSLVQNFISWIRYSKT 840

Query: 122 SREPSAFLNTSTELAVVLLRHGQYDAVE 149
             + S+ L  STEL++ L+R+GQ DAVE
Sbjct: 841 GDDSSSLLRRSTELSLRLIRNGQSDAVE 867

[Close]

BLAST of MELO3C020407T3 vs. NCBI nr
Match: gi|659114710|ref|XP_008457192.1| (PREDICTED: nuclear pore complex protein NUP160 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 295.4 bits (755), Expect = 5.4e-77
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1


Query: 2   QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG 61
           QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG
Sbjct: 725 QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG 784

Query: 62  KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS 121
           KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS
Sbjct: 785 KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS 844

Query: 122 REPSAFLNTSTELAVVLLRHGQYDAVE 149
           REPSAFLNTSTELAVVLLRHGQYDAVE
Sbjct: 845 REPSAFLNTSTELAVVLLRHGQYDAVE 871

[Close]

BLAST of MELO3C020407T3 vs. NCBI nr
Match: gi|659114712|ref|XP_008457193.1| (PREDICTED: nuclear pore complex protein NUP160 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 295.4 bits (755), Expect = 5.4e-77
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1


Query: 2   QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG 61
           QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG
Sbjct: 724 QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG 783

Query: 62  KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS 121
           KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS
Sbjct: 784 KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS 843

Query: 122 REPSAFLNTSTELAVVLLRHGQYDAVE 149
           REPSAFLNTSTELAVVLLRHGQYDAVE
Sbjct: 844 REPSAFLNTSTELAVVLLRHGQYDAVE 870

[Close]

BLAST of MELO3C020407T3 vs. NCBI nr
Match: gi|659114714|ref|XP_008457194.1| (PREDICTED: nuclear pore complex protein NUP160 homolog isoform X3 [Cucumis melo])

HSP 1 Score: 295.4 bits (755), Expect = 5.4e-77
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1


Query: 2   QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG 61
           QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG
Sbjct: 725 QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG 784

Query: 62  KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS 121
           KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS
Sbjct: 785 KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS 844

Query: 122 REPSAFLNTSTELAVVLLRHGQYDAVE 149
           REPSAFLNTSTELAVVLLRHGQYDAVE
Sbjct: 845 REPSAFLNTSTELAVVLLRHGQYDAVE 871

[Close]

BLAST of MELO3C020407T3 vs. NCBI nr
Match: gi|659114716|ref|XP_008457195.1| (PREDICTED: nuclear pore complex protein NUP160 homolog isoform X4 [Cucumis melo])

HSP 1 Score: 295.4 bits (755), Expect = 5.4e-77
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1


Query: 2   QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG 61
           QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG
Sbjct: 725 QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG 784

Query: 62  KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS 121
           KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS
Sbjct: 785 KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS 844

Query: 122 REPSAFLNTSTELAVVLLRHGQYDAVE 149
           REPSAFLNTSTELAVVLLRHGQYDAVE
Sbjct: 845 REPSAFLNTSTELAVVLLRHGQYDAVE 871

[Close]

BLAST of MELO3C020407T3 vs. NCBI nr
Match: gi|659114718|ref|XP_008457197.1| (PREDICTED: nuclear pore complex protein NUP160 homolog isoform X5 [Cucumis melo])

HSP 1 Score: 295.4 bits (755), Expect = 5.4e-77
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1


Query: 2   QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG 61
           QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG
Sbjct: 725 QIGLLHDDTSRIKLELIPMIEEIICEWHIINFLAITPSESAAVEDFSSQLSLLQIDTYGG 784

Query: 62  KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS 121
           KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS
Sbjct: 785 KEIWKGKLGKCDFTLASLLLLKMNSSAEGPVYLSTKCLLNPQDIVLATQNFTSWIIWGSS 844

Query: 122 REPSAFLNTSTELAVVLLRHGQYDAVE 149
           REPSAFLNTSTELAVVLLRHGQYDAVE
Sbjct: 845 REPSAFLNTSTELAVVLLRHGQYDAVE 871

The following BLAST results are available for this feature:

BLAST of MELO3C020407T3 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NU160_ARATH	9.1e-24	42.57	Nuclear pore complex protein NUP160 OS=Arabidopsis thaliana GN=NUP160 PE=1 SV=2	[more]

BLAST of MELO3C020407T3 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI10_CUCSA	1.4e-76	98.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G149490 PE=4 SV=1	[more]
A0A061GAH6_THECC	1.0e-42	64.19	Suppressor of auxin resistance1, putative OS=Theobroma cacao GN=TCM_028019 PE=4 ...	[more]
A0A0D2R291_GOSRA	3.0e-42	61.49	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G307100 PE=4 SV=1	[more]
A0A0D2PHF8_GOSRA	3.0e-42	61.49	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G307100 PE=4 SV=1	[more]
A0A0D2TPJ3_GOSRA	3.0e-42	61.49	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G307100 PE=4 SV=1	[more]

BLAST of MELO3C020407T3 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G33410.1	5.1e-25	42.57	SUPPRESSOR OF AUXIN RESISTANCE1	[more]

BLAST of MELO3C020407T3 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114710\|ref\|XP_008457192.1\|	5.4e-77	100.00	PREDICTED: nuclear pore complex protein NUP160 homolog isoform X1 [Cucumis melo]	[more]
gi\|659114712\|ref\|XP_008457193.1\|	5.4e-77	100.00	PREDICTED: nuclear pore complex protein NUP160 homolog isoform X2 [Cucumis melo]	[more]
gi\|659114714\|ref\|XP_008457194.1\|	5.4e-77	100.00	PREDICTED: nuclear pore complex protein NUP160 homolog isoform X3 [Cucumis melo]	[more]
gi\|659114716\|ref\|XP_008457195.1\|	5.4e-77	100.00	PREDICTED: nuclear pore complex protein NUP160 homolog isoform X4 [Cucumis melo]	[more]
gi\|659114718\|ref\|XP_008457197.1\|	5.4e-77	100.00	PREDICTED: nuclear pore complex protein NUP160 homolog isoform X5 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C020407	MELO3C020407	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C020407T3	MELO3C020407T3-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C020407T3.cds2	MELO3C020407T3.cds2	CDS
MELO3C020407T3.cds1	MELO3C020407T3.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21286	NUCLEAR PORE COMPLEX PROTEIN NUP160	coord: 2..148 score: 1.0