MELO3C019567.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCAACTAATTCAAATGTGGGGTTTTTCTTTGGTTTTGTGTATTCATTCTCTGTTTTTGATCCCAAAAATTTGGAGTTACATTGGTCAATTGTGTAGTGACTATTGACATTAGACAGCATTTTTTAGATTTGATATGGTCTGCTTTTTAGCACAAGAGAATAAATCCACCTTTTCTTTACATTATATGTTTGGTTTTATTTTAGATTAAGTTGTTTCTACTTTTATCGAGGTTTTGATACAATTTACATGTGTACACAACTAGCTAGCTAGTTGCAACTTTCTTGAGATTGATTAACTATGTCCCGTTTGATAATGTTGTTTCTTGTTTTCGATTCTTGAGAAACTGTTAGAATCGAAAATATCTAGTTATGTGTTAGACTCGTTTGAATAAACTCATCTTTACTTTACATGTATGTTGATTTATTTTAGGTGAAAGCTTCTCCTTTTCTGAACTTTAGATTCAATTTATACGTGAGCACAACTAGCTAGTTGCAACCTTCTTAGGATTTGTTAACTATGTCTCATTTGATAACATTGTTGTTTCTTGTTTTTGGTTTCCGAGAAAAGAAGGCCAAAATCAAGCTATTTGTTACAACTAGTTTTTGTTTCTTGACTATATACTTCTCTCTAGATTGATAACGTCGCTGTTTCTTGTTTTTTTGGTCATTGAGAAATGGTTCTAAGTTATGGGTTAGGAGTTGATAATGTTTTTGGTTTCTTGGCTTTATAATACTTCCACTCTGGATCAGAGTGGTGAGTTTTTTTTGACATAAAAGCAGAAACTGAGAAGTTAGACTATGAGTTCCTAAACAAATCAGCCACTTAGTATTGACTCCCAAATGTGATTCTCAACAAGGATCCTTAATTCCTTTATCCATTTCTCATAATTAAACTACATCAATAATTAACCCACCATCTCGTCTCTCTCTTCTTCTTCTTCCTCTTCCCACACTTCCCATCACTTATTTGCCTTCAGTCTTCATCTTCTCTTTTCATGCTTCACAACAATTTGTTCAAGAATCTTCAGTTGGCTACTTGAGTTTCTTCTGATTTTTATCTTGATCTTCAAATGGTATGAATCTCCCTCGTGTTTCTTCTATTTTCCATTTTCTTGCTGAGATTATAGATTAAGAACACTTTATTTTCTTCTTCTCCTATCAACTGTTCGTTTGTTTTCTGGTTTTGATCTCTATATTTTTGTTCTGCCTTTATAAGAAGAAACATCATGAACTGATTAGCTACTTTGTTTTTGTGATTGATTTTTCCCACCCTCTTACCTTTTCGGTTTTTCCCCCTCTCTTCCTCTTTTTGGTTCTTAATTTGTAAATTTTGCCATCATGAACTTTATAGTTTACATCATATTCTTGAGATTGGAATTTTATGAACTCTCTATCTTCACCCTTTTTCAGCAAACTGTCTGTATCCATTTTCTTTAAGTTACTTTGATATCTTATTCTAATTTCTTCAAAAACAAAACCAGTCAAAACTTGTAAACTAGGTGTTGATAAGATGAGAGATAAACTAAATTCATAGAAATCATTTCATTTTGGTAGTCATGAGATGTGATAGCTTCTTGAGCAGGGCTGGAAAAATAATGCTGATATCAATCTTGTTCAACATTTGGCAGGAGGCAATTGGGGTGATATTGGTACCTAATTTTGAGCTTGTGTAGATATAAAAGTAAAGCTTTTGAGTTTTCTACCAACAGCAGCACTCAATAATGAAACCATTTCTTGACCTTGAAAAGGAGCCTTCATGTTTGGCAAATGATTCTGATATTAGTAGCCAAGTTGCTTCTTCCAACTACATTTCTCCACTCCATGAAAATTCTAATGATAATAGTCTCATAACTAACTCCTCTTTTCTTGCTAACCCAAATATTCCTGCTGCTGATCAACCAGGATTCGAGTCAGTTTGCCTCGAATTGACTCTCAATTTTAACATCGAAGATCTTGAAACAAGACCTGATTCGACAGGATTTTCATTGTCAAGCACAAGTGATCAGAGTAGTAATGAACCTACAGCATGTGCAACAATGGCTGTCCCAAGAGTATTTTCTTGCAACTACTGTCAGCGCAAGTTCTTTAGTTCACAAGCTCTTGGTGGCCACCAGAACGCACATAAGCGCGAACGAACGTTGGCGAAACGTGCGATGCGTATGGGAATTCTAGCTGATAGATATGTGAGCTTAGCATCTTTACCATTGAAAGGCTCATCATTTAAGTCCTTAGGGATCAAAGCACACTCTTCATTGCTCCATGGAGTTGCTGCACCAATGAAGCCTAATGAAATCAGGAGCAGTGCTAGATTCGAACCGGAACCGGGATATATAGGCATGCCGCTTTTCTTGGAGGATGATGAAGCAGAAGTTATGTGGCCTGGTAGTTTTCGTCCAATGGTAGAAACTAGAAGCACTCATGAACTAACTCGACCAAGTTTCATACTGACTGGTATTTCAAGCATAAGCTCAGCAGATAAGACTTCGGAGGATGTCGAAAATTCGACCCTTGATCTTACACTTAAACTCTAATCTAAGGGTCAATATCATCACTGTTTCTGCTGTCTTTATCTGTACAGTAAGTGATAAATGGTGGGTTTAGTGTTGCAAGTTTCAATCAAACAAAAGTTAAACTTTCCCCATTTAAGTACTTGTTTATAAATCTTTTGCTGTGGGTTTGCTATAAGTGATTTTCCTTGCTTAAGGTTCTTGTAGAAGCATTTTCTTGCTATCTACTCCTTCGTATGCTGGCTCTTATCTTATAGTAATGCAAGTGCTCTACCATTTTAT TTCAACTAATTCAAATGTGGGGTTTTTCTTTGGTTTTGTGTATTCATTCTCTGTTTTTGATCCCAAAAATTTGGAGTTACATTGGTCAATTGTGTAGTGACTATTGACATTAGACAGCATTTTTTAGATTTGATATGGTCTGCTTTTTAGCACAAGAGAATAAATCCACCTTTTCTTTACATTATATGTTTGGTTTTATTTTAGATTAAGTTGTTTCTACTTTTATCGAGGTTTTGATACAATTTACATGTGTACACAACTAGCTAGCTAGTTGCAACTTTCTTGAGATTGATTAACTATGTCCCGTTTGATAATGTTGTTTCTTGTTTTCGATTCTTGAGAAACTGTTAGAATCGAAAATATCTAGTTATGTGTTAGACTCGTTTGAATAAACTCATCTTTACTTTACATGTATGTTGATTTATTTTAGGTGAAAGCTTCTCCTTTTCTGAACTTTAGATTCAATTTATACGTGAGCACAACTAGCTAGTTGCAACCTTCTTAGGATTTGTTAACTATGTCTCATTTGATAACATTGTTGTTTCTTGTTTTTGGTTTCCGAGAAAAGAAGGCCAAAATCAAGCTATTTGTTACAACTAGTTTTTGTTTCTTGACTATATACTTCTCTCTAGATTGATAACGTCGCTGTTTCTTGTTTTTTTGGTCATTGAGAAATGGTTCTAAGTTATGGGTTAGGAGTTGATAATGTTTTTGGTTTCTTGGCTTTATAATACTTCCACTCTGGATCAGAGTGGTGAGTTTTTTTTGACATAAAAGCAGAAACTGAGAAGTTAGACTATGAGTTCCTAAACAAATCAGCCACTTAGTATTGACTCCCAAATGTGATTCTCAACAAGGATCCTTAATTCCTTTATCCATTTCTCATAATTAAACTACATCAATAATTAACCCACCATCTCGTCTCTCTCTTCTTCTTCTTCCTCTTCCCACACTTCCCATCACTTATTTGCCTTCAGTCTTCATCTTCTCTTTTCATGCTTCACAACAATTTGTTCAAGAATCTTCAGTTGGCTACTTGAGTTTCTTCTGATTTTTATCTTGATCTTCAAATGGAGGCAATTGGGGTGATATTGGTACCTAATTTTGAGCTTGTGTAGATATAAAAGTAAAGCTTTTGAGTTTTCTACCAACAGCAGCACTCAATAATGAAACCATTTCTTGACCTTGAAAAGGAGCCTTCATGTTTGGCAAATGATTCTGATATTAGTAGCCAAGTTGCTTCTTCCAACTACATTTCTCCACTCCATGAAAATTCTAATGATAATAGTCTCATAACTAACTCCTCTTTTCTTGCTAACCCAAATATTCCTGCTGCTGATCAACCAGGATTCGAGTCAGTTTGCCTCGAATTGACTCTCAATTTTAACATCGAAGATCTTGAAACAAGACCTGATTCGACAGGATTTTCATTGTCAAGCACAAGTGATCAGAGTAGTAATGAACCTACAGCATGTGCAACAATGGCTGTCCCAAGAGTATTTTCTTGCAACTACTGTCAGCGCAAGTTCTTTAGTTCACAAGCTCTTGGTGGCCACCAGAACGCACATAAGCGCGAACGAACGTTGGCGAAACGTGCGATGCGTATGGGAATTCTAGCTGATAGATATGTGAGCTTAGCATCTTTACCATTGAAAGGCTCATCATTTAAGTCCTTAGGGATCAAAGCACACTCTTCATTGCTCCATGGAGTTGCTGCACCAATGAAGCCTAATGAAATCAGGAGCAGTGCTAGATTCGAACCGGAACCGGGATATATAGGCATGCCGCTTTTCTTGGAGGATGATGAAGCAGAAGTTATGTGGCCTGGTAGTTTTCGTCCAATGGTAGAAACTAGAAGCACTCATGAACTAACTCGACCAAGTTTCATACTGACTGGTATTTCAAGCATAAGCTCAGCAGATAAGACTTCGGAGGATGTCGAAAATTCGACCCTTGATCTTACACTTAAACTCTAATCTAAGGGTCAATATCATCACTGTTTCTGCTGTCTTTATCTGTACAGTAAGTGATAAATGGTGGGTTTAGTGTTGCAAGTTTCAATCAAACAAAAGTTAAACTTTCCCCATTTAAGTACTTGTTTATAAATCTTTTGCTGTGGGTTTGCTATAAGTGATTTTCCTTGCTTAAGGTTCTTGTAGAAGCATTTTCTTGCTATCTACTCCTTCGTATGCTGGCTCTTATCTTATAGTAATGCAAGTGCTCTACCATTTTAT ATGAAACCATTTCTTGACCTTGAAAAGGAGCCTTCATGTTTGGCAAATGATTCTGATATTAGTAGCCAAGTTGCTTCTTCCAACTACATTTCTCCACTCCATGAAAATTCTAATGATAATAGTCTCATAACTAACTCCTCTTTTCTTGCTAACCCAAATATTCCTGCTGCTGATCAACCAGGATTCGAGTCAGTTTGCCTCGAATTGACTCTCAATTTTAACATCGAAGATCTTGAAACAAGACCTGATTCGACAGGATTTTCATTGTCAAGCACAAGTGATCAGAGTAGTAATGAACCTACAGCATGTGCAACAATGGCTGTCCCAAGAGTATTTTCTTGCAACTACTGTCAGCGCAAGTTCTTTAGTTCACAAGCTCTTGGTGGCCACCAGAACGCACATAAGCGCGAACGAACGTTGGCGAAACGTGCGATGCGTATGGGAATTCTAGCTGATAGATATGTGAGCTTAGCATCTTTACCATTGAAAGGCTCATCATTTAAGTCCTTAGGGATCAAAGCACACTCTTCATTGCTCCATGGAGTTGCTGCACCAATGAAGCCTAATGAAATCAGGAGCAGTGCTAGATTCGAACCGGAACCGGGATATATAGGCATGCCGCTTTTCTTGGAGGATGATGAAGCAGAAGTTATGTGGCCTGGTAGTTTTCGTCCAATGGTAGAAACTAGAAGCACTCATGAACTAACTCGACCAAGTTTCATACTGACTGGTATTTCAAGCATAAGCTCAGCAGATAAGACTTCGGAGGATGTCGAAAATTCGACCCTTGATCTTACACTTAAACTCTAA MKPFLDLEKEPSCLANDSDISSQVASSNYISPLHENSNDNSLITNSSFLANPNIPAADQPGFESVCLELTLNFNIEDLETRPDSTGFSLSSTSDQSSNEPTACATMAVPRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGILADRYVSLASLPLKGSSFKSLGIKAHSSLLHGVAAPMKPNEIRSSARFEPEPGYIGMPLFLEDDEAEVMWPGSFRPMVETRSTHELTRPSFILTGISSISSADKTSEDVENSTLDLTLKL
BLAST of MELO3C019567.2.1 vs. NCBI nr
Match: XP_008456195.1 (PREDICTED: zinc finger protein 4-like [Cucumis melo]) HSP 1 Score: 525.4 bits (1352), Expect = 1.1e-145 Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0
BLAST of MELO3C019567.2.1 vs. NCBI nr
Match: XP_004140816.1 (PREDICTED: zinc finger protein 4-like [Cucumis sativus] >KGN57476.1 hypothetical protein Csa_3G196420 [Cucumis sativus]) HSP 1 Score: 507.7 bits (1306), Expect = 2.5e-140 Identity = 257/269 (95.54%), Postives = 264/269 (98.14%), Query Frame = 0
BLAST of MELO3C019567.2.1 vs. NCBI nr
Match: XP_022948481.1 (zinc finger protein 4-like isoform X1 [Cucurbita moschata] >XP_022948482.1 zinc finger protein 4-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 390.6 bits (1002), Expect = 4.4e-105 Identity = 221/272 (81.25%), Postives = 239/272 (87.87%), Query Frame = 0
BLAST of MELO3C019567.2.1 vs. NCBI nr
Match: XP_023525082.1 (zinc finger protein 4-like [Cucurbita pepo subsp. pepo] >XP_023525083.1 zinc finger protein 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 386.0 bits (990), Expect = 1.1e-103 Identity = 220/272 (80.88%), Postives = 238/272 (87.50%), Query Frame = 0
BLAST of MELO3C019567.2.1 vs. NCBI nr
Match: XP_022998251.1 (zinc finger protein 4-like isoform X1 [Cucurbita maxima] >XP_022998252.1 zinc finger protein 4-like isoform X1 [Cucurbita maxima] >XP_022998253.1 zinc finger protein 4-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 383.6 bits (984), Expect = 5.3e-103 Identity = 219/272 (80.51%), Postives = 237/272 (87.13%), Query Frame = 0
BLAST of MELO3C019567.2.1 vs. TAIR10
Match: AT1G66140.1 (zinc finger protein 4) HSP 1 Score: 132.1 bits (331), Expect = 5.1e-31 Identity = 90/190 (47.37%), Postives = 112/190 (58.95%), Query Frame = 0
BLAST of MELO3C019567.2.1 vs. TAIR10
Match: AT1G24625.1 (zinc finger protein 7) HSP 1 Score: 114.0 bits (284), Expect = 1.4e-25 Identity = 84/195 (43.08%), Postives = 112/195 (57.44%), Query Frame = 0
BLAST of MELO3C019567.2.1 vs. TAIR10
Match: AT1G80730.1 (zinc-finger protein 1) HSP 1 Score: 90.1 bits (222), Expect = 2.2e-18 Identity = 52/90 (57.78%), Postives = 62/90 (68.89%), Query Frame = 0
BLAST of MELO3C019567.2.1 vs. TAIR10
Match: AT5G25160.1 (zinc finger protein 3) HSP 1 Score: 85.1 bits (209), Expect = 7.1e-17 Identity = 53/114 (46.49%), Postives = 68/114 (59.65%), Query Frame = 0
BLAST of MELO3C019567.2.1 vs. TAIR10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein) HSP 1 Score: 82.0 bits (201), Expect = 6.0e-16 Identity = 54/120 (45.00%), Postives = 71/120 (59.17%), Query Frame = 0
BLAST of MELO3C019567.2.1 vs. Swiss-Prot
Match: sp|Q39263|ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2) HSP 1 Score: 132.1 bits (331), Expect = 9.2e-30 Identity = 90/190 (47.37%), Postives = 112/190 (58.95%), Query Frame = 0
BLAST of MELO3C019567.2.1 vs. Swiss-Prot
Match: sp|Q39266|ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.6e-24 Identity = 84/195 (43.08%), Postives = 112/195 (57.44%), Query Frame = 0
BLAST of MELO3C019567.2.1 vs. Swiss-Prot
Match: sp|Q42485|ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 4.0e-17 Identity = 52/90 (57.78%), Postives = 62/90 (68.89%), Query Frame = 0
BLAST of MELO3C019567.2.1 vs. Swiss-Prot
Match: sp|Q39262|ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.3e-15 Identity = 53/114 (46.49%), Postives = 68/114 (59.65%), Query Frame = 0
BLAST of MELO3C019567.2.1 vs. Swiss-Prot
Match: sp|Q39261|ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 8.6e-12 Identity = 32/39 (82.05%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of MELO3C019567.2.1 vs. TrEMBL
Match: tr|A0A1S3C2N5|A0A1S3C2N5_CUCME (zinc finger protein 4-like OS=Cucumis melo OX=3656 GN=LOC103496205 PE=4 SV=1) HSP 1 Score: 525.4 bits (1352), Expect = 7.5e-146 Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0
BLAST of MELO3C019567.2.1 vs. TrEMBL
Match: tr|A0A0A0LBR9|A0A0A0LBR9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G196420 PE=4 SV=1) HSP 1 Score: 507.7 bits (1306), Expect = 1.6e-140 Identity = 257/269 (95.54%), Postives = 264/269 (98.14%), Query Frame = 0
BLAST of MELO3C019567.2.1 vs. TrEMBL
Match: tr|A0A2P5AR99|A0A2P5AR99_PARAD (Zinc finger, C2H OS=Parasponia andersonii OX=3476 GN=PanWU01x14_308040 PE=4 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 1.8e-70 Identity = 165/271 (60.89%), Postives = 202/271 (74.54%), Query Frame = 0
BLAST of MELO3C019567.2.1 vs. TrEMBL
Match: tr|A0A2P5DEP7|A0A2P5DEP7_9ROSA (Zinc finger, C2H OS=Trema orientalis OX=63057 GN=TorRG33x02_253510 PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 4.4e-69 Identity = 163/271 (60.15%), Postives = 200/271 (73.80%), Query Frame = 0
BLAST of MELO3C019567.2.1 vs. TrEMBL
Match: tr|A0A067JPD7|A0A067JPD7_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_22548 PE=4 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 1.7e-68 Identity = 160/275 (58.18%), Postives = 201/275 (73.09%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
|