MELO3C019329T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C019329T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionOxysterol binding protein-related protein 1D
Locationchr11 : 11726067 .. 11726717 (+)
Sequence length363
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAGACAATATCCAACAAAGATACACAGTTGTTCCTAAATATACTGGTTAGTATTGTTATTATTGCTTCTTCTTTCAAGTGGTCCTATGAATAGTTCAGTTTCCACATCCATTATCTCTTCATGGTTTAATGATTCTGATCTCAATAATGGAGTTGTTTCTACTGTATGTTTCTTTTTAAAAGTTATTAATCTATCATAGACCGGAATCCACATCAGATAAGCTTTATGGTTAAGAAACGATATGTTTATCATCCTTGTGCAGAAGCAAAACTATATGAATACAAACATCTGTAACAATCTATTCATAGAACTTCTCTTCTATTTATTGGTCAGGTCCATGGATTTGTGCAAGACAATAGAACAGGAGAAAAGGTGGCACTTTTGGTGGGAAAGTGGGATGAGGCAATGTACTACATGTTAGGAGACCCCACCACAAAGCCTAAGGGATACGATCCAATGACAGAAGTTGTATTGCTATGGGAAAGAAACAGATCTGTAACTAAAACAAGATATAACCTCTCTCCTTTTGCCATATCCTTGAATGAACTCACACTAGGTTTGATGGAGATACTGCCTCCAACTGACTTAAGGCTTAGACCAGATCAGTTAAATGGAGTTAGCAAATGCAGAGAAGTTAAGACTTGA

mRNA sequence

ATGGAAAAGACAATATCCAACAAAGATACACAGTTGTTCCTAAATATACTGGTCCATGGATTTGTGCAAGACAATAGAACAGGAGAAAAGGTGGCACTTTTGGTGGGAAAGTGGGATGAGGCAATGTACTACATGTTAGGAGACCCCACCACAAAGCCTAAGGGATACGATCCAATGACAGAAGTTGTATTGCTATGGGAAAGAAACAGATCTGTAACTAAAACAAGATATAACCTCTCTCCTTTTGCCATATCCTTGAATGAACTCACACTAGGTTTGATGGAGATACTGCCTCCAACTGACTTAAGGCTTAGACCAGATCAGTTAAATGGAGTTAGCAAATGCAGAGAAGTTAAGACTTGA

Coding sequence (CDS)

ATGGAAAAGACAATATCCAACAAAGATACACAGTTGTTCCTAAATATACTGGTCCATGGATTTGTGCAAGACAATAGAACAGGAGAAAAGGTGGCACTTTTGGTGGGAAAGTGGGATGAGGCAATGTACTACATGTTAGGAGACCCCACCACAAAGCCTAAGGGATACGATCCAATGACAGAAGTTGTATTGCTATGGGAAAGAAACAGATCTGTAACTAAAACAAGATATAACCTCTCTCCTTTTGCCATATCCTTGAATGAACTCACACTAGGTTTGATGGAGATACTGCCTCCAACTGACTTAAGGCTTAGACCAGATCAGTTAAATGGAGTTAGCAAATGCAGAGAAGTTAAGACTTGA

Protein sequence

MEKTISNKDTQLFLNILVHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTEVVLLWERNRSVTKTRYNLSPFAISLNELTLGLMEILPPTDLRLRPDQLNGVSKCREVKT*
Homology
[Close]
BLAST of MELO3C019329T1 vs. Swiss-Prot
Match: ORP1D_ARATH (Oxysterol-binding protein-related protein 1D OS=Arabidopsis thaliana GN=ORP1D PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 3.9e-41
Identity = 77/91 (84.62%), Postives = 84/91 (92.31%), Query Frame = 1 

Query: 18  VHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTEVVLLWERNRSVTKTRY 77
           VHGFVQDNRTGEKVA+L+GKWDEAMYY+LGDPTTKPKGYDPMTE VLLWER++S TKTRY
Sbjct: 640 VHGFVQDNRTGEKVAILIGKWDEAMYYVLGDPTTKPKGYDPMTEAVLLWERDKSPTKTRY 699

Query: 78  NLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
           NLSPFAISLNE+T G+++ LPPTD RLRPDQ
Sbjct: 700 NLSPFAISLNEITPGMIDKLPPTDSRLRPDQ 730

[Close]
BLAST of MELO3C019329T1 vs. Swiss-Prot
Match: ORP2A_ARATH (Oxysterol-binding protein-related protein 2A OS=Arabidopsis thaliana GN=ORP2A PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.4e-21
Identity = 52/92 (56.52%), Postives = 63/92 (68.48%), Query Frame = 1 

Query: 18  VHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTEVVLLWERNRSVTK-TR 77
           V+GFV+D   G+K A + GKWD+++YY+ GD   K K  DP +   LLW+R +     TR
Sbjct: 551 VNGFVEDV-AGQKAATIFGKWDDSLYYVAGDGINKSKVSDPASNASLLWKRTKPPPNVTR 610

Query: 78  YNLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
           YNL+ FAI+LNELT GL EILPPTD RLRPDQ
Sbjct: 611 YNLTSFAITLNELTPGLQEILPPTDSRLRPDQ 641

[Close]
BLAST of MELO3C019329T1 vs. Swiss-Prot
Match: ORP1C_ARATH (Oxysterol-binding protein-related protein 1C OS=Arabidopsis thaliana GN=ORP1C PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.2e-18
Identity = 49/92 (53.26%), Postives = 65/92 (70.65%), Query Frame = 1 

Query: 18  VHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTEVVLLWERNRSV-TKTR 77
           VHG VQ N++G+ VA + GKWDE+++++ GD + K K  + M+   LLW+R++     T+
Sbjct: 644 VHGIVQ-NKSGKTVATMFGKWDESIHFVTGDCSGKGKLSEDMSGAQLLWKRSKPPGNATK 703

Query: 78  YNLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
           YNL+ FAI+LNELT GL E LPPTD RLRPDQ
Sbjct: 704 YNLTRFAITLNELTPGLKERLPPTDSRLRPDQ 734

[Close]
BLAST of MELO3C019329T1 vs. Swiss-Prot
Match: ORP1B_ARATH (Oxysterol-binding protein-related protein 1B OS=Arabidopsis thaliana GN=ORP1B PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.2e-15
Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 1 

Query: 18  VHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTEVVLLWERNRSVTK-TR 77
           V G V+D + G+ VA L GKWDE+MYY++ +   + + +       LLW+RN+ +   T+
Sbjct: 333 VQGIVED-KNGKTVAKLFGKWDESMYYVMVNQGKESESH-------LLWKRNKPLENPTK 392

Query: 78  YNLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
           YNL+ F I+LNELT  L E+LPPTD RLRPDQ
Sbjct: 393 YNLTRFGITLNELTPDLKEMLPPTDSRLRPDQ 416

[Close]
BLAST of MELO3C019329T1 vs. Swiss-Prot
Match: ORP1A_ARATH (Oxysterol-binding protein-related protein 1A OS=Arabidopsis thaliana GN=ORP1A PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 6.3e-15
Identity = 46/92 (50.00%), Postives = 58/92 (63.04%), Query Frame = 1 

Query: 18  VHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTEVVLLWERNRSVTK-TR 77
           V G V+D + G+ VA L GKWDE+++Y++ D          + E  LLW+RN+     T+
Sbjct: 600 VQGIVED-KNGKTVARLFGKWDESIHYVMVDQ-------GKVNESHLLWKRNKQPENPTK 659

Query: 78  YNLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
           YNL+ F I+LNELT GL E LPPTD RLRPDQ
Sbjct: 660 YNLTRFGITLNELTPGLKEKLPPTDSRLRPDQ 683

[Close]
BLAST of MELO3C019329T1 vs. TrEMBL
Match: A0A0A0KVE0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G593340 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.6e-41
Identity = 84/91 (92.31%), Postives = 85/91 (93.41%), Query Frame = 1 

Query: 18  VHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTEVVLLWERNRSVTKTRY 77
           VHGFVQDNRTGEKVALLVGKWDEAMYY+LGDP TKPKGYDPMTE  LLWERNRSV KTRY
Sbjct: 637 VHGFVQDNRTGEKVALLVGKWDEAMYYVLGDPATKPKGYDPMTEAALLWERNRSVAKTRY 696

Query: 78  NLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
           NLSPFAISLNELT GLMEILPPTD RLRPDQ
Sbjct: 697 NLSPFAISLNELTPGLMEILPPTDSRLRPDQ 727

[Close]
BLAST of MELO3C019329T1 vs. TrEMBL
Match: A0A061E8R1_THECC (OSBP(Oxysterol binding protein)-related protein 1D isoform 1 OS=Theobroma cacao GN=TCM_010659 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.3e-40
Identity = 80/91 (87.91%), Postives = 87/91 (95.60%), Query Frame = 1 

Query: 18  VHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTEVVLLWERNRSVTKTRY 77
           VHGFVQDNRTGEKVA+LVGKWDEAMYY+LGDPTTKPKGYDPMTE VLLWER++S+TKTRY
Sbjct: 631 VHGFVQDNRTGEKVAMLVGKWDEAMYYVLGDPTTKPKGYDPMTEAVLLWERDKSITKTRY 690

Query: 78  NLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
           NL+PFAISLNELT GL+E LPPTD RLRPDQ
Sbjct: 691 NLTPFAISLNELTPGLLEKLPPTDSRLRPDQ 721

[Close]
BLAST of MELO3C019329T1 vs. TrEMBL
Match: B9HTF9_POPTR (Oxysterol-binding family protein OS=Populus trichocarpa GN=POPTR_0010s06130g PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 5.1e-40
Identity = 80/91 (87.91%), Postives = 87/91 (95.60%), Query Frame = 1 

Query: 18  VHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTEVVLLWERNRSVTKTRY 77
           VHGFVQDNRTGEKVA+LVGKWDEA+YY+LGDPTTKPKGYDPMTE VLLWER++SVTKTRY
Sbjct: 626 VHGFVQDNRTGEKVAMLVGKWDEAVYYVLGDPTTKPKGYDPMTEAVLLWERDKSVTKTRY 685

Query: 78  NLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
           NL+PFAISLNELT GL+E LPPTD RLRPDQ
Sbjct: 686 NLTPFAISLNELTPGLLEKLPPTDSRLRPDQ 716

[Close]
BLAST of MELO3C019329T1 vs. TrEMBL
Match: A0A067H354_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003720mg PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.1e-39
Identity = 79/91 (86.81%), Postives = 86/91 (94.51%), Query Frame = 1 

Query: 18  VHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTEVVLLWERNRSVTKTRY 77
           VHGFVQDNRTGEKVA+LVGKWDEAMYY+LGDPTTKPKGYDPMTE VLLWER ++VTKTRY
Sbjct: 629 VHGFVQDNRTGEKVAMLVGKWDEAMYYVLGDPTTKPKGYDPMTEAVLLWERGKTVTKTRY 688

Query: 78  NLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
           NL+PFAISLNELT GL++ LPPTD RLRPDQ
Sbjct: 689 NLTPFAISLNELTPGLLDKLPPTDSRLRPDQ 719

[Close]
BLAST of MELO3C019329T1 vs. TrEMBL
Match: A0A067GQX9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003720mg PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.1e-39
Identity = 79/91 (86.81%), Postives = 86/91 (94.51%), Query Frame = 1 

Query: 18  VHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTEVVLLWERNRSVTKTRY 77
           VHGFVQDNRTGEKVA+LVGKWDEAMYY+LGDPTTKPKGYDPMTE VLLWER ++VTKTRY
Sbjct: 614 VHGFVQDNRTGEKVAMLVGKWDEAMYYVLGDPTTKPKGYDPMTEAVLLWERGKTVTKTRY 673

Query: 78  NLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
           NL+PFAISLNELT GL++ LPPTD RLRPDQ
Sbjct: 674 NLTPFAISLNELTPGLLDKLPPTDSRLRPDQ 704

[Close]
BLAST of MELO3C019329T1 vs. TAIR10
Match: AT1G13170.2 (AT1G13170.2 OSBP(oxysterol binding protein)-related protein 1D)

HSP 1 Score: 168.7 bits (426), Expect = 2.2e-42
Identity = 77/91 (84.62%), Postives = 84/91 (92.31%), Query Frame = 1 

Query: 18  VHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTEVVLLWERNRSVTKTRY 77
           VHGFVQDNRTGEKVA+L+GKWDEAMYY+LGDPTTKPKGYDPMTE VLLWER++S TKTRY
Sbjct: 661 VHGFVQDNRTGEKVAILIGKWDEAMYYVLGDPTTKPKGYDPMTEAVLLWERDKSPTKTRY 720

Query: 78  NLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
           NLSPFAISLNE+T G+++ LPPTD RLRPDQ
Sbjct: 721 NLSPFAISLNEITPGMIDKLPPTDSRLRPDQ 751

[Close]
BLAST of MELO3C019329T1 vs. TAIR10
Match: AT4G22540.1 (AT4G22540.1 OSBP(oxysterol binding protein)-related protein 2A)

HSP 1 Score: 102.4 bits (254), Expect = 1.9e-22
Identity = 52/92 (56.52%), Postives = 63/92 (68.48%), Query Frame = 1 

Query: 18  VHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTEVVLLWERNRSVTK-TR 77
           V+GFV+D   G+K A + GKWD+++YY+ GD   K K  DP +   LLW+R +     TR
Sbjct: 551 VNGFVEDV-AGQKAATIFGKWDDSLYYVAGDGINKSKVSDPASNASLLWKRTKPPPNVTR 610

Query: 78  YNLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
           YNL+ FAI+LNELT GL EILPPTD RLRPDQ
Sbjct: 611 YNLTSFAITLNELTPGLQEILPPTDSRLRPDQ 641

[Close]
BLAST of MELO3C019329T1 vs. TAIR10
Match: AT4G08180.1 (AT4G08180.1 OSBP(oxysterol binding protein)-related protein 1C)

HSP 1 Score: 94.0 bits (232), Expect = 6.9e-20
Identity = 49/92 (53.26%), Postives = 65/92 (70.65%), Query Frame = 1 

Query: 18  VHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTEVVLLWERNRSV-TKTR 77
           VHG VQ N++G+ VA + GKWDE+++++ GD + K K  + M+   LLW+R++     T+
Sbjct: 644 VHGIVQ-NKSGKTVATMFGKWDESIHFVTGDCSGKGKLSEDMSGAQLLWKRSKPPGNATK 703

Query: 78  YNLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
           YNL+ FAI+LNELT GL E LPPTD RLRPDQ
Sbjct: 704 YNLTRFAITLNELTPGLKERLPPTDSRLRPDQ 734

[Close]
BLAST of MELO3C019329T1 vs. TAIR10
Match: AT2G31030.1 (AT2G31030.1 OSBP(oxysterol binding protein)-related protein 1B)

HSP 1 Score: 83.2 bits (204), Expect = 1.2e-16
Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 1 

Query: 18  VHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTEVVLLWERNRSVTK-TR 77
           V G V+D + G+ VA L GKWDE+MYY++ +   + + +       LLW+RN+ +   T+
Sbjct: 333 VQGIVED-KNGKTVAKLFGKWDESMYYVMVNQGKESESH-------LLWKRNKPLENPTK 392

Query: 78  YNLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
           YNL+ F I+LNELT  L E+LPPTD RLRPDQ
Sbjct: 393 YNLTRFGITLNELTPDLKEMLPPTDSRLRPDQ 416

[Close]
BLAST of MELO3C019329T1 vs. TAIR10
Match: AT2G31020.1 (AT2G31020.1 OSBP(oxysterol binding protein)-related protein 1A)

HSP 1 Score: 81.6 bits (200), Expect = 3.5e-16
Identity = 46/92 (50.00%), Postives = 58/92 (63.04%), Query Frame = 1 

Query: 18  VHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTEVVLLWERNRSVTK-TR 77
           V G V+D + G+ VA L GKWDE+++Y++ D          + E  LLW+RN+     T+
Sbjct: 600 VQGIVED-KNGKTVARLFGKWDESIHYVMVDQ-------GKVNESHLLWKRNKQPENPTK 659

Query: 78  YNLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
           YNL+ F I+LNELT GL E LPPTD RLRPDQ
Sbjct: 660 YNLTRFGITLNELTPGLKEKLPPTDSRLRPDQ 683

[Close]
BLAST of MELO3C019329T1 vs. NCBI nr
Match: gi|659090637|ref|XP_008446121.1| (PREDICTED: oxysterol-binding protein-related protein 1D isoform X1 [Cucumis melo])

HSP 1 Score: 180.3 bits (456), Expect = 2.1e-42
Identity = 86/91 (94.51%), Postives = 87/91 (95.60%), Query Frame = 1 

Query: 18  VHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTEVVLLWERNRSVTKTRY 77
           VHGFVQDNRTGEKVALLVGKWDEAMYY+LGDPTTKPKGYDPMTE VLLWERNRSV KTRY
Sbjct: 637 VHGFVQDNRTGEKVALLVGKWDEAMYYVLGDPTTKPKGYDPMTEAVLLWERNRSVAKTRY 696

Query: 78  NLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
           NLSPFAISLNELT GLMEILPPTD RLRPDQ
Sbjct: 697 NLSPFAISLNELTPGLMEILPPTDSRLRPDQ 727

[Close]
BLAST of MELO3C019329T1 vs. NCBI nr
Match: gi|659090639|ref|XP_008446122.1| (PREDICTED: oxysterol-binding protein-related protein 1D isoform X2 [Cucumis melo])

HSP 1 Score: 180.3 bits (456), Expect = 2.1e-42
Identity = 86/91 (94.51%), Postives = 87/91 (95.60%), Query Frame = 1 

Query: 18  VHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTEVVLLWERNRSVTKTRY 77
           VHGFVQDNRTGEKVALLVGKWDEAMYY+LGDPTTKPKGYDPMTE VLLWERNRSV KTRY
Sbjct: 412 VHGFVQDNRTGEKVALLVGKWDEAMYYVLGDPTTKPKGYDPMTEAVLLWERNRSVAKTRY 471

Query: 78  NLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
           NLSPFAISLNELT GLMEILPPTD RLRPDQ
Sbjct: 472 NLSPFAISLNELTPGLMEILPPTDSRLRPDQ 502

[Close]
BLAST of MELO3C019329T1 vs. NCBI nr
Match: gi|449435005|ref|XP_004135286.1| (PREDICTED: oxysterol-binding protein-related protein 1D [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 2.3e-41
Identity = 84/91 (92.31%), Postives = 85/91 (93.41%), Query Frame = 1 

Query: 18  VHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTEVVLLWERNRSVTKTRY 77
           VHGFVQDNRTGEKVALLVGKWDEAMYY+LGDP TKPKGYDPMTE  LLWERNRSV KTRY
Sbjct: 637 VHGFVQDNRTGEKVALLVGKWDEAMYYVLGDPATKPKGYDPMTEAALLWERNRSVAKTRY 696

Query: 78  NLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
           NLSPFAISLNELT GLMEILPPTD RLRPDQ
Sbjct: 697 NLSPFAISLNELTPGLMEILPPTDSRLRPDQ 727

[Close]
BLAST of MELO3C019329T1 vs. NCBI nr
Match: gi|658009813|ref|XP_008340131.1| (PREDICTED: oxysterol-binding protein-related protein 1D-like isoform X1 [Malus domestica])

HSP 1 Score: 173.7 bits (439), Expect = 1.9e-40
Identity = 84/107 (78.50%), Postives = 93/107 (86.92%), Query Frame = 1 

Query: 2   EKTISNKDTQLFLNILVHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTE 61
           E++I +++    L   VHGFVQDNRTGEKVA+LVGKWDEAMYY+LGDPTTKPKGYDPMTE
Sbjct: 637 EQSIIDRNPHQPLEFQVHGFVQDNRTGEKVAMLVGKWDEAMYYVLGDPTTKPKGYDPMTE 696

Query: 62  VVLLWERNRSVTKTRYNLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
            VLLWER+  VTKTRYNLSPFAISLNELT GL+E LPPTD RLRPDQ
Sbjct: 697 AVLLWERDDYVTKTRYNLSPFAISLNELTPGLLERLPPTDSRLRPDQ 743

[Close]
BLAST of MELO3C019329T1 vs. NCBI nr
Match: gi|658035016|ref|XP_008353028.1| (PREDICTED: oxysterol-binding protein-related protein 1D-like isoform X1 [Malus domestica])

HSP 1 Score: 173.7 bits (439), Expect = 1.9e-40
Identity = 84/107 (78.50%), Postives = 93/107 (86.92%), Query Frame = 1 

Query: 2   EKTISNKDTQLFLNILVHGFVQDNRTGEKVALLVGKWDEAMYYMLGDPTTKPKGYDPMTE 61
           E++I +++    L   VHGFVQDNRTGEKVA+LVGKWDEAMYY+LGDPTTKPKGYDPMTE
Sbjct: 638 EQSIIDRNPHQPLEFQVHGFVQDNRTGEKVAMLVGKWDEAMYYVLGDPTTKPKGYDPMTE 697

Query: 62  VVLLWERNRSVTKTRYNLSPFAISLNELTLGLMEILPPTDLRLRPDQ 109
            VLLWER+  VTKTRYNLSPFAISLNELT GL+E LPPTD RLRPDQ
Sbjct: 698 AVLLWERDDYVTKTRYNLSPFAISLNELTPGLLERLPPTDSRLRPDQ 744

The following BLAST results are available for this feature:
BLAST of MELO3C019329T1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ORP1D_ARATH3.9e-4184.62Oxysterol-binding protein-related protein 1D OS=Arabidopsis thaliana GN=ORP1D PE... [more]
ORP2A_ARATH3.4e-2156.52Oxysterol-binding protein-related protein 2A OS=Arabidopsis thaliana GN=ORP2A PE... [more]
ORP1C_ARATH1.2e-1853.26Oxysterol-binding protein-related protein 1C OS=Arabidopsis thaliana GN=ORP1C PE... [more]
ORP1B_ARATH2.2e-1548.91Oxysterol-binding protein-related protein 1B OS=Arabidopsis thaliana GN=ORP1B PE... [more]
ORP1A_ARATH6.3e-1550.00Oxysterol-binding protein-related protein 1A OS=Arabidopsis thaliana GN=ORP1A PE... [more]
BLAST of MELO3C019329T1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVE0_CUCSA1.6e-4192.31Uncharacterized protein OS=Cucumis sativus GN=Csa_5G593340 PE=4 SV=1[more]
A0A061E8R1_THECC2.3e-4087.91OSBP(Oxysterol binding protein)-related protein 1D isoform 1 OS=Theobroma cacao ... [more]
B9HTF9_POPTR5.1e-4087.91Oxysterol-binding family protein OS=Populus trichocarpa GN=POPTR_0010s06130g PE=... [more]
A0A067H354_CITSI1.1e-3986.81Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003720mg PE=4 SV=1[more]
A0A067GQX9_CITSI1.1e-3986.81Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003720mg PE=4 SV=1[more]
BLAST of MELO3C019329T1 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G13170.22.2e-4284.62 OSBP(oxysterol binding protein)-related protein 1D[more]
AT4G22540.11.9e-2256.52 OSBP(oxysterol binding protein)-related protein 2A[more]
AT4G08180.16.9e-2053.26 OSBP(oxysterol binding protein)-related protein 1C[more]
AT2G31030.11.2e-1648.91 OSBP(oxysterol binding protein)-related protein 1B[more]
AT2G31020.13.5e-1650.00 OSBP(oxysterol binding protein)-related protein 1A[more]
BLAST of MELO3C019329T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090637|ref|XP_008446121.1|2.1e-4294.51PREDICTED: oxysterol-binding protein-related protein 1D isoform X1 [Cucumis melo... [more]
gi|659090639|ref|XP_008446122.1|2.1e-4294.51PREDICTED: oxysterol-binding protein-related protein 1D isoform X2 [Cucumis melo... [more]
gi|449435005|ref|XP_004135286.1|2.3e-4192.31PREDICTED: oxysterol-binding protein-related protein 1D [Cucumis sativus][more]
gi|658009813|ref|XP_008340131.1|1.9e-4078.50PREDICTED: oxysterol-binding protein-related protein 1D-like isoform X1 [Malus d... [more]
gi|658035016|ref|XP_008353028.1|1.9e-4078.50PREDICTED: oxysterol-binding protein-related protein 1D-like isoform X1 [Malus d... [more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000648Oxysterol-bd
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C019329MELO3C019329gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C019329T1MELO3C019329T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C019329T1.cds1MELO3C019329T1.cds1CDS
MELO3C019329T1.cds2MELO3C019329T1.cds2CDS


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000648Oxysterol-binding proteinPANTHERPTHR10972OXYSTEROL-BINDING PROTEIN-RELATEDcoord: 17..108
score: 1.3
IPR000648Oxysterol-binding proteinPFAMPF01237Oxysterol_BPcoord: 18..109
score: 7.6
NoneNo IPR availablePANTHERPTHR10972:SF67OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1Dcoord: 17..108
score: 1.3
NoneNo IPR availableunknownSSF144000Oxysterol-binding protein-likecoord: 18..109
score: 4.3