MELO3C019286T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C019286T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionAminotransferase-like, plant mobile domain family protein
Locationchr11 : 10778763 .. 10779217 (+)
Sequence length399
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCGTAACACTTTATCCGAGCTATACTTACCCGCACGTTTGTTAGAGCCTTGCAAGCATGTGACTCAACGATTTACAGACTGGTGGACCACGAAGCACGGGACCTATTTTGAGGATAACAGACACCATTTGGTGAGTAGTGCCATTCCTTTCCCCTTTTCACAACCTAGACTACTGAAGAACCGAGGGAGCAACTTGGGTGGTAAAGAAATTCGATTGGTTGAGGCGATGGCTCATAATCTTGAGGAAGAGGTAAAGGTCCGTAAAGATGAGAGCGATAGAAGCAAATGTGATCGTCATTGGAAGAGGGCTTTGAAGAAAGCGAAGGTATCAGGTGATCATCCCGACGGAAGGGGTTTAAGTGCTTTAGAAGTTTTTGATGTTCCACCACTGGTTTGCACGTTTTCCCTTCTAAATTTTTTTTTTGTTTTGTCCATCTTCTTCGTAAGTGA

mRNA sequence

ATGAGGCGTAACACTTTATCCGAGCTATACTTACCCGCACGTTTGTTAGAGCCTTGCAAGCATGTGACTCAACGATTTACAGACTGGTGGACCACGAAGCACGGGACCTATTTTGAGGATAACAGACACCATTTGGTGAGTAGTGCCATTCCTTTCCCCTTTTCACAACCTAGACTACTGAAGAACCGAGGGAGCAACTTGGGTGGTAAAGAAATTCGATTGGTTGAGGCGATGGCTCATAATCTTGAGGAAGAGGTAAAGGTCCGTAAAGATGAGAGCGATAGAAGCAAATGTGATCGTCATTGGAAGAGGGCTTTGAAGAAAGCGAAGGTATCAGGTGATCATCCCGACGGAAGGGGTTTAAGTGCTTTAGAAGTTTTTGATGTTCCACCACTGTGA

Coding sequence (CDS)

ATGAGGCGTAACACTTTATCCGAGCTATACTTACCCGCACGTTTGTTAGAGCCTTGCAAGCATGTGACTCAACGATTTACAGACTGGTGGACCACGAAGCACGGGACCTATTTTGAGGATAACAGACACCATTTGGTGAGTAGTGCCATTCCTTTCCCCTTTTCACAACCTAGACTACTGAAGAACCGAGGGAGCAACTTGGGTGGTAAAGAAATTCGATTGGTTGAGGCGATGGCTCATAATCTTGAGGAAGAGGTAAAGGTCCGTAAAGATGAGAGCGATAGAAGCAAATGTGATCGTCATTGGAAGAGGGCTTTGAAGAAAGCGAAGGTATCAGGTGATCATCCCGACGGAAGGGGTTTAAGTGCTTTAGAAGTTTTTGATGTTCCACCACTGTGA

Protein sequence

MRRNTLSELYLPARLLEPCKHVTQRFTDWWTTKHGTYFEDNRHHLVSSAIPFPFSQPRLLKNRGSNLGGKEIRLVEAMAHNLEEEVKVRKDESDRSKCDRHWKRALKKAKVSGDHPDGRGLSALEVFDVPPL*
Homology
[Close]
BLAST of MELO3C019286T1 vs. TrEMBL
Match: E5GCB9_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.3e-48
Identity = 100/116 (86.21%), Postives = 100/116 (86.21%), Query Frame = 1 

Query: 2   RRNTLSELYLPARLLEPCKHVTQRFTDWWTTKHGTYFEDNRHHLVSSAIPFPFSQPRLLK 61
           RR TL ELYLP R LEPCKHVTQRFTDWWTTKH TYFEDNRHHLVSSAI  P SQPRL K
Sbjct: 269 RRYTLFELYLPVRSLEPCKHVTQRFTDWWTTKHMTYFEDNRHHLVSSAISPP-SQPRLPK 328

Query: 62  NRGSNLGGKEIRLVEAMAHNLEEEVKVRKDESDRSKCDRHWKRALKKAKVSGDHPD 118
           NRGSNLGGKEI LVEAMA NLEEEVK  KDESD SK DRHWKR LKKAKVSGDHPD
Sbjct: 329 NRGSNLGGKEIGLVEAMAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPD 383

[Close]
BLAST of MELO3C019286T1 vs. NCBI nr
Match: gi|307136292|gb|ADN34118.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 199.1 bits (505), Expect = 4.8e-48
Identity = 100/116 (86.21%), Postives = 100/116 (86.21%), Query Frame = 1 

Query: 2   RRNTLSELYLPARLLEPCKHVTQRFTDWWTTKHGTYFEDNRHHLVSSAIPFPFSQPRLLK 61
           RR TL ELYLP R LEPCKHVTQRFTDWWTTKH TYFEDNRHHLVSSAI  P SQPRL K
Sbjct: 269 RRYTLFELYLPVRSLEPCKHVTQRFTDWWTTKHMTYFEDNRHHLVSSAISPP-SQPRLPK 328

Query: 62  NRGSNLGGKEIRLVEAMAHNLEEEVKVRKDESDRSKCDRHWKRALKKAKVSGDHPD 118
           NRGSNLGGKEI LVEAMA NLEEEVK  KDESD SK DRHWKR LKKAKVSGDHPD
Sbjct: 329 NRGSNLGGKEIGLVEAMAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPD 383

The following BLAST results are available for this feature:
BLAST of MELO3C019286T1 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GCB9_CUCME3.3e-4886.21Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
BLAST of MELO3C019286T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|307136292|gb|ADN34118.1|4.8e-4886.21hypothetical protein [Cucumis melo subsp. melo][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C019286MELO3C019286gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C019286T1MELO3C019286T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C019286T1.cds1MELO3C019286T1.cds1CDS
MELO3C019286T1.cds2MELO3C019286T1.cds2CDS