MELO3C019283T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C019283T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionWALL ASSOCIATED KINASE (WAK)-LIKE 10
Locationchr11 : 10715757 .. 10716130 (+)
Sequence length315
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATTTTGTTGGAGCTACAACACAATATCATATCCTCGGTATAAAATGTTGGTTAAAAAATCTAAAAATCAAATTGTGGGAAAAATACAATTTTCAGCATGCCACCATCAAACACATAAAGGAATGGTTCGCAGAGAACAAATATCTACAAGACATTGATCAAAGAAAGAATGTCGAGTTCTTAAATGACAAATCAAAACTCCATGTCGCACTTGCACAAGCCACAACTGATGCAGATTTCCAGAGATTATTATCAATAGCAGTAAATGCTTCTTCTTCTTCTAAGTCACCATCTTCTTCCATACAGGAAGACGAAGAACAAATAGATCCAGAATATGATCTAGACGATCTCGACTCACAACCTATGTGA

mRNA sequence

ATGGATATTTTGTTGGAGCTACAACACAATATCATATCCTCGCATGCCACCATCAAACACATAAAGGAATGGTTCGCAGAGAACAAATATCTACAAGACATTGATCAAAGAAAGAATGTCGAGTTCTTAAATGACAAATCAAAACTCCATGTCGCACTTGCACAAGCCACAACTGATGCAGATTTCCAGAGATTATTATCAATAGCAGTAAATGCTTCTTCTTCTTCTAAGTCACCATCTTCTTCCATACAGGAAGACGAAGAACAAATAGATCCAGAATATGATCTAGACGATCTCGACTCACAACCTATGTGA

Coding sequence (CDS)

ATGGATATTTTGTTGGAGCTACAACACAATATCATATCCTCGCATGCCACCATCAAACACATAAAGGAATGGTTCGCAGAGAACAAATATCTACAAGACATTGATCAAAGAAAGAATGTCGAGTTCTTAAATGACAAATCAAAACTCCATGTCGCACTTGCACAAGCCACAACTGATGCAGATTTCCAGAGATTATTATCAATAGCAGTAAATGCTTCTTCTTCTTCTAAGTCACCATCTTCTTCCATACAGGAAGACGAAGAACAAATAGATCCAGAATATGATCTAGACGATCTCGACTCACAACCTATGTGA

Protein sequence

MDILLELQHNIISSHATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLHVALAQATTDADFQRLLSIAVNASSSSKSPSSSIQEDEEQIDPEYDLDDLDSQPM*
Homology
[Close]
BLAST of MELO3C019283T1 vs. TrEMBL
Match: A0A0A0KYU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G427780 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.4e-17
Identity = 46/56 (82.14%), Postives = 49/56 (87.50%), Query Frame = 1 

Query: 12 ISSHATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLHVALAQATTDADFQRLLS 68
          I  HATIKH+KEWFAEN YLQDIDQRKN+EFLNDKSKL   LAQATTD +FQRLLS
Sbjct: 18 IKEHATIKHMKEWFAENNYLQDIDQRKNIEFLNDKSKLLALLAQATTDTNFQRLLS 73

[Close]
BLAST of MELO3C019283T1 vs. NCBI nr
Match: gi|700199535|gb|KGN54693.1| (hypothetical protein Csa_4G427780 [Cucumis sativus])

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-17
Identity = 46/56 (82.14%), Postives = 49/56 (87.50%), Query Frame = 1 

Query: 12 ISSHATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLHVALAQATTDADFQRLLS 68
          I  HATIKH+KEWFAEN YLQDIDQRKN+EFLNDKSKL   LAQATTD +FQRLLS
Sbjct: 18 IKEHATIKHMKEWFAENNYLQDIDQRKNIEFLNDKSKLLALLAQATTDTNFQRLLS 73

[Close]
BLAST of MELO3C019283T1 vs. NCBI nr
Match: gi|659098578|ref|XP_008450208.1| (PREDICTED: putative protein TPRXL [Cucumis melo])

HSP 1 Score: 93.2 bits (230), Expect = 2.9e-16
Identity = 49/54 (90.74%), Postives = 51/54 (94.44%), Query Frame = 1 

Query: 53  LAQATTDADFQRLLSIAVNASSSSKSPSSSIQEDEEQIDPEYDLDD--LDSQPM 105
           LAQATTDADFQRLLS AVNASSSSKSPSSSIQEDEEQ+DPEYDL+D  LDSQPM
Sbjct: 142 LAQATTDADFQRLLSTAVNASSSSKSPSSSIQEDEEQVDPEYDLNDPFLDSQPM 195

The following BLAST results are available for this feature:
BLAST of MELO3C019283T1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYU0_CUCSA1.4e-1782.14Uncharacterized protein OS=Cucumis sativus GN=Csa_4G427780 PE=4 SV=1[more]
BLAST of MELO3C019283T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199535|gb|KGN54693.1|2.0e-1782.14hypothetical protein Csa_4G427780 [Cucumis sativus][more]
gi|659098578|ref|XP_008450208.1|2.9e-1690.74PREDICTED: putative protein TPRXL [Cucumis melo][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C019283MELO3C019283gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C019283T1MELO3C019283T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C019283T1.cds1MELO3C019283T1.cds1CDS
MELO3C019283T1.cds2MELO3C019283T1.cds2CDS