MELO3C019213T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C019213T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionMitochondrial import receptor subunit TOM7-1
Locationchr11 : 9162185 .. 9162999 (+)
Sequence length815
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAATCAACCGCAACAAGAGGAAGGTTCCAGCATTTTGCAGAGATCAAATTCTCCCATCAATGGCGTCGAAGGTTTCTCTTAGGAGCAAGGGGAAGAGCTCCAAGTCTTCATCCAAGTCATCTGAGGAGAAATCCGCTACTCAAGCCTTCAAGGAGTGGACTACATGGGCCGTAAAGAAAGCTAAGGTCATCACCCACTACGGCTTTATTCCTCTGGTCATCATCATCGGCATGAACTCCGAGCCTAAGCCTCAGCTCTCCCAACTCCTCAGCCCCGTTTGATCTGATTGCTTTCTTCCATGATGGATCGGGTTTGTTTTATATGGATGTTTTTGTTGGGGGCTAGTTAGCGTATAAATTTTAGGTCAGTTTGAGTATAATGTTCACATGCTTGAACTACAGAAGACATGCAATAGTTTGAGGCGAAAGTTTTGATCTATTTTTTATTTCTTCTCAAATATCTGTTATTACTTCACCGGTATGAATCTTGGTTATACGCTTCGTTTTTTCTGAGTATTGTCTGTTTATTCAAATAATTGAACGGTTTTAGGGTTTATTTCCGCTATCTGATCCGTGATTCCTAAAGACTGTCATGGATTTAAGCATATAAGACTGATATGGGCTGTACTATCAAAAGCCCCATTTTGTAATGCCTGTTTGTCCCGCCTCTTATTTCAAGTTAATAGGAACTGATCAAGGATTTATAGTCACCATTGTACGAGTTGATTCTATTATCGTTCGTTATGTTCTATTATTTAAATCTTGGCTTTAAATTGTGATAATAAAGTGCCATGTCTGAGTATCATGTTCTTAGT

mRNA sequence

CAAATCAACCGCAACAAGAGGAAGGTTCCAGCATTTTGCAGAGATCAAATTCTCCCATCAATGGCGTCGAAGGTTTCTCTTAGGAGCAAGGGGAAGAGCTCCAAGTCTTCATCCAAGTCATCTGAGGAGAAATCCGCTACTCAAGCCTTCAAGGAGTGGACTACATGGGCCGTAAAGAAAGCTAAGGTCATCACCCACTACGGCTTTATTCCTCTGGTCATCATCATCGGCATGAACTCCGAGCCTAAGCCTCAGCTCTCCCAACTCCTCAGCCCCGTTTGATCTGATTGCTTTCTTCCATGATGGATCGGGTTTGTTTTATATGGATGTTTTTGTTGGGGGCTAGTTAGCGTATAAATTTTAGGTCAGTTTGAGTATAATGTTCACATGCTTGAACTACAGAAGACATGCAATAGTTTGAGGCGAAAGTTTTGATCTATTTTTTATTTCTTCTCAAATATCTGTTATTACTTCACCGGTATGAATCTTGGTTATACGCTTCGTTTTTTCTGAGTATTGTCTGTTTATTCAAATAATTGAACGGTTTTAGGGTTTATTTCCGCTATCTGATCCGTGATTCCTAAAGACTGTCATGGATTTAAGCATATAAGACTGATATGGGCTGTACTATCAAAAGCCCCATTTTGTAATGCCTGTTTGTCCCGCCTCTTATTTCAAGTTAATAGGAACTGATCAAGGATTTATAGTCACCATTGTACGAGTTGATTCTATTATCGTTCGTTATGTTCTATTATTTAAATCTTGGCTTTAAATTGTGATAATAAAGTGCCATGTCTGAGTATCATGTTCTTAGT

Coding sequence (CDS)

ATGGCGTCGAAGGTTTCTCTTAGGAGCAAGGGGAAGAGCTCCAAGTCTTCATCCAAGTCATCTGAGGAGAAATCCGCTACTCAAGCCTTCAAGGAGTGGACTACATGGGCCGTAAAGAAAGCTAAGGTCATCACCCACTACGGCTTTATTCCTCTGGTCATCATCATCGGCATGAACTCCGAGCCTAAGCCTCAGCTCTCCCAACTCCTCAGCCCCGTTTGA

Protein sequence

MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNSEPKPQLSQLLSPV*
Homology
[Close]
BLAST of MELO3C019213T1 vs. Swiss-Prot
Match: TOM71_ARATH (Mitochondrial import receptor subunit TOM7-1 OS=Arabidopsis thaliana GN=TOM7-1 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.6e-19
Identity = 48/76 (63.16%), Postives = 56/76 (73.68%), Query Frame = 1 

Query: 1  MASKVSLR---SKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIG 60
          M S +SL+    KGK SK +S SS++KS     KEWT W++KKAKV+THYGFIPLVI +G
Sbjct: 1  MESTISLKVNKGKGKGSKGAS-SSDDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVG 60

Query: 61 MNSEPKPQLSQLLSPV 74
          MNS+PKP L QLLSPV
Sbjct: 61 MNSDPKPHLFQLLSPV 75

[Close]
BLAST of MELO3C019213T1 vs. Swiss-Prot
Match: TOM72_ARATH (Mitochondrial import receptor subunit TOM7-2 OS=Arabidopsis thaliana GN=TOM7-2 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.3e-18
Identity = 46/77 (59.74%), Postives = 55/77 (71.43%), Query Frame = 1 

Query: 1  MASKVSLRSKGKSS----KSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIII 60
          MA+K +L+ KGK+      SSS SS   S  + FK+WT W+++KAKV THYGFIPL+III
Sbjct: 1  MAAKSTLKIKGKAKPSKGSSSSSSSSASSKYKVFKDWTNWSLQKAKVATHYGFIPLIIII 60

Query: 61 GMNSEPKPQLSQLLSPV 74
          GMNS+PKP L  LLSPV
Sbjct: 61 GMNSDPKPHLFHLLSPV 77

[Close]
BLAST of MELO3C019213T1 vs. Swiss-Prot
Match: TOM7A_SOLTU (Mitochondrial import receptor subunit TOM7-1 OS=Solanum tuberosum GN=TOM7-1 PE=3 SV=3)

HSP 1 Score: 92.8 bits (229), Expect = 1.7e-18
Identity = 46/71 (64.79%), Postives = 51/71 (71.83%), Query Frame = 1 

Query: 7  LRSKGKSSKSSSKSSEEKSATQAF----KEWTTWAVKKAKVITHYGFIPLVIIIGMNSEP 66
          L+ KGK++K ++ + E+  A        KEW TW  KKAKVITHYGFIPLVIIIGMNSEP
Sbjct: 2  LKPKGKNTKKAAAADEDDGAVAVVGKFVKEWGTWTAKKAKVITHYGFIPLVIIIGMNSEP 61

Query: 67 KPQLSQLLSPV 74
          KP LSQLLSPV
Sbjct: 62 KPSLSQLLSPV 72

[Close]
BLAST of MELO3C019213T1 vs. TrEMBL
Match: A0A0A0LN99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G424720 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 9.2e-32
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 1 

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKV+THYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]
BLAST of MELO3C019213T1 vs. TrEMBL
Match: M5XYQ7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014339mg PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.9e-24
Identity = 54/73 (73.97%), Postives = 66/73 (90.41%), Query Frame = 1 

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKV+L+SKGK++   SK S+E+S  Q+ KEW+TWA+KKAKV+THYGFIPL+I+IGMNS
Sbjct: 1  MASKVTLKSKGKTTNKGSKGSDERSVAQSVKEWSTWAMKKAKVVTHYGFIPLIIVIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]
BLAST of MELO3C019213T1 vs. TrEMBL
Match: A0A0D2W5P2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G132400 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.6e-23
Identity = 57/73 (78.08%), Postives = 64/73 (87.67%), Query Frame = 1 

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MAS+VSL++KGK  K S K S+EKS TQ  KEW+TWA+KKAKV+THYGFIPLVIIIGMNS
Sbjct: 1  MASRVSLKTKGKGGKGS-KGSDEKSTTQCLKEWSTWAMKKAKVVTHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          EPKPQL QLLSPV
Sbjct: 61 EPKPQLYQLLSPV 72

[Close]
BLAST of MELO3C019213T1 vs. TrEMBL
Match: A0A0B2NRY8_GLYSO (Mitochondrial import receptor subunit TOM7-1 OS=Glycine soja GN=glysoja_017553 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.1e-23
Identity = 56/73 (76.71%), Postives = 68/73 (93.15%), Query Frame = 1 

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MAS+VSL++KGKSSK S K++E++SA++  KEWTTWA++KAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASRVSLKAKGKSSKGS-KAAEDRSASECLKEWTTWAMRKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          +PKP LSQLLSPV
Sbjct: 61 DPKPPLSQLLSPV 72

[Close]
BLAST of MELO3C019213T1 vs. TrEMBL
Match: I1K650_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G2214001 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.1e-23
Identity = 56/73 (76.71%), Postives = 68/73 (93.15%), Query Frame = 1 

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MAS+VSL++KGKSSK S K++E++SA++  KEWTTWA++KAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASRVSLKAKGKSSKGS-KAAEDRSASECLKEWTTWAMRKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          +PKP LSQLLSPV
Sbjct: 61 DPKPPLSQLLSPV 72

[Close]
BLAST of MELO3C019213T1 vs. TAIR10
Match: AT5G41685.1 (AT5G41685.1 Mitochondrial outer membrane translocase complex, subunit Tom7)

HSP 1 Score: 95.5 bits (236), Expect = 1.5e-20
Identity = 48/76 (63.16%), Postives = 56/76 (73.68%), Query Frame = 1 

Query: 1  MASKVSLR---SKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIG 60
          M S +SL+    KGK SK +S SS++KS     KEWT W++KKAKV+THYGFIPLVI +G
Sbjct: 1  MESTISLKVNKGKGKGSKGAS-SSDDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVG 60

Query: 61 MNSEPKPQLSQLLSPV 74
          MNS+PKP L QLLSPV
Sbjct: 61 MNSDPKPHLFQLLSPV 75

[Close]
BLAST of MELO3C019213T1 vs. TAIR10
Match: AT1G64220.1 (AT1G64220.1 translocase of outer membrane 7 kDa subunit 2)

HSP 1 Score: 93.2 bits (230), Expect = 7.2e-20
Identity = 46/77 (59.74%), Postives = 55/77 (71.43%), Query Frame = 1 

Query: 1  MASKVSLRSKGKSS----KSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIII 60
          MA+K +L+ KGK+      SSS SS   S  + FK+WT W+++KAKV THYGFIPL+III
Sbjct: 1  MAAKSTLKIKGKAKPSKGSSSSSSSSASSKYKVFKDWTNWSLQKAKVATHYGFIPLIIII 60

Query: 61 GMNSEPKPQLSQLLSPV 74
          GMNS+PKP L  LLSPV
Sbjct: 61 GMNSDPKPHLFHLLSPV 77

[Close]
BLAST of MELO3C019213T1 vs. NCBI nr
Match: gi|659111612|ref|XP_008455820.1| (PREDICTED: mitochondrial import receptor subunit TOM7-1-like [Cucumis melo])

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-31
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1 

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]
BLAST of MELO3C019213T1 vs. NCBI nr
Match: gi|449468321|ref|XP_004151870.1| (PREDICTED: mitochondrial import receptor subunit TOM7-1 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-31
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 1 

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKV+THYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]
BLAST of MELO3C019213T1 vs. NCBI nr
Match: gi|658011794|ref|XP_008341149.1| (PREDICTED: mitochondrial import receptor subunit TOM7-2-like [Malus domestica])

HSP 1 Score: 122.1 bits (305), Expect = 4.1e-25
Identity = 57/73 (78.08%), Postives = 66/73 (90.41%), Query Frame = 1 

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MAS++SL+SKGK+    SK SEE+S  Q+FKEW+TWA+KKAKV+THYGFIPLVIIIGMNS
Sbjct: 1  MASRISLKSKGKTPAKPSKGSEERSVAQSFKEWSTWALKKAKVVTHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]
BLAST of MELO3C019213T1 vs. NCBI nr
Match: gi|694388666|ref|XP_009370016.1| (PREDICTED: mitochondrial import receptor subunit TOM7-2-like [Pyrus x bretschneideri])

HSP 1 Score: 121.3 bits (303), Expect = 7.0e-25
Identity = 56/73 (76.71%), Postives = 66/73 (90.41%), Query Frame = 1 

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MAS++SL+SKGK+    SK SEE+S  Q+FKEW+TWA+KKAKV+THYGFIP+VIIIGMNS
Sbjct: 1  MASRISLKSKGKTPAKPSKGSEERSVAQSFKEWSTWALKKAKVVTHYGFIPMVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]
BLAST of MELO3C019213T1 vs. NCBI nr
Match: gi|596287525|ref|XP_007225789.1| (hypothetical protein PRUPE_ppa014339mg [Prunus persica])

HSP 1 Score: 119.4 bits (298), Expect = 2.7e-24
Identity = 54/73 (73.97%), Postives = 66/73 (90.41%), Query Frame = 1 

Query: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKV+L+SKGK++   SK S+E+S  Q+ KEW+TWA+KKAKV+THYGFIPL+I+IGMNS
Sbjct: 1  MASKVTLKSKGKTTNKGSKGSDERSVAQSVKEWSTWAMKKAKVVTHYGFIPLIIVIGMNS 60

Query: 61 EPKPQLSQLLSPV 74
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

The following BLAST results are available for this feature:
BLAST of MELO3C019213T1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TOM71_ARATH2.6e-1963.16Mitochondrial import receptor subunit TOM7-1 OS=Arabidopsis thaliana GN=TOM7-1 P... [more]
TOM72_ARATH1.3e-1859.74Mitochondrial import receptor subunit TOM7-2 OS=Arabidopsis thaliana GN=TOM7-2 P... [more]
TOM7A_SOLTU1.7e-1864.79Mitochondrial import receptor subunit TOM7-1 OS=Solanum tuberosum GN=TOM7-1 PE=3... [more]
BLAST of MELO3C019213T1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LN99_CUCSA9.2e-3298.63Uncharacterized protein OS=Cucumis sativus GN=Csa_2G424720 PE=4 SV=1[more]
M5XYQ7_PRUPE1.9e-2473.97Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014339mg PE=4 SV=1[more]
A0A0D2W5P2_GOSRA1.6e-2378.08Uncharacterized protein OS=Gossypium raimondii GN=B456_013G132400 PE=4 SV=1[more]
A0A0B2NRY8_GLYSO2.1e-2376.71Mitochondrial import receptor subunit TOM7-1 OS=Glycine soja GN=glysoja_017553 P... [more]
I1K650_SOYBN2.1e-2376.71Uncharacterized protein OS=Glycine max GN=GLYMA_05G2214001 PE=4 SV=1[more]
BLAST of MELO3C019213T1 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G41685.11.5e-2063.16 Mitochondrial outer membrane translocase complex, subunit Tom7[more]
AT1G64220.17.2e-2059.74 translocase of outer membrane 7 kDa subunit 2[more]
BLAST of MELO3C019213T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659111612|ref|XP_008455820.1|1.0e-31100.00PREDICTED: mitochondrial import receptor subunit TOM7-1-like [Cucumis melo][more]
gi|449468321|ref|XP_004151870.1|1.3e-3198.63PREDICTED: mitochondrial import receptor subunit TOM7-1 [Cucumis sativus][more]
gi|658011794|ref|XP_008341149.1|4.1e-2578.08PREDICTED: mitochondrial import receptor subunit TOM7-2-like [Malus domestica][more]
gi|694388666|ref|XP_009370016.1|7.0e-2576.71PREDICTED: mitochondrial import receptor subunit TOM7-2-like [Pyrus x bretschnei... [more]
gi|596287525|ref|XP_007225789.1|2.7e-2473.97hypothetical protein PRUPE_ppa014339mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR012621Tom7
Vocabulary: Cellular Component
TermDefinition
GO:0005742mitochondrial outer membrane translocase complex
Vocabulary: Biological Process
TermDefinition
GO:0030150protein import into mitochondrial matrix
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030150 protein import into mitochondrial matrix
cellular_component GO:0005742 mitochondrial outer membrane translocase complex
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C019213MELO3C019213gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C019213T1MELO3C019213T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C019213T1.cds1MELO3C019213T1.cds1CDS


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012621Mitochondrial import receptor subunit TOM7PFAMPF08038Tom7coord: 31..70
score: 1.1
NoneNo IPR availablePANTHERPTHR34944FAMILY NOT NAMEDcoord: 1..73
score: 5.1
NoneNo IPR availablePANTHERPTHR34944:SF2MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM7-1-RELATEDcoord: 1..73
score: 5.1