MELO3C019151.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C019151.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	A-kinase anchor protein 12
Location	chr08 : 14593641 .. 14593898 (+)
Sequence length	258

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGCGTATCTTTAATAAGATAGCTCAGAGGTTGGCTGACGGTGTTAGGTTAGCTCAAGCAGATCTTGAGAAGAAATATGGCATTGAGAGGATGAAAGCTCTAGGTGCCACTCCGTTTAAGGGGACTGTAGATTCTGTTGAAGTGGAGGCATGGTTGACGTTGATAGAGAAATGTTTCTGGGTTATGCATTGTCTGGAAGACAGAAAAGTGGAATTAGCCACGTTCCTGCTTAAAAAAAGAGCAGAGGATTGA

mRNA sequence

ATGGAAGAGCGTATCTTTAATAAGATAGCTCAGAGGTTGGCTGACGGTGTTAGGTTAGCTCAAGCAGATCTTGAGAAGAAATATGGCATTGAGAGGATGAAAGCTCTAGGTGCCACTCCGTTTAAGGGGACTGTAGATTCTGTTGAAGTGGAGGCATGGTTGACGTTGATAGAGAAATGTTTCTGGGTTATGCATTGTCTGGAAGACAGAAAAGTGGAATTAGCCACGTTCCTGCTTAAAAAAAGAGCAGAGGATTGA

Coding sequence (CDS)

ATGGAAGAGCGTATCTTTAATAAGATAGCTCAGAGGTTGGCTGACGGTGTTAGGTTAGCTCAAGCAGATCTTGAGAAGAAATATGGCATTGAGAGGATGAAAGCTCTAGGTGCCACTCCGTTTAAGGGGACTGTAGATTCTGTTGAAGTGGAGGCATGGTTGACGTTGATAGAGAAATGTTTCTGGGTTATGCATTGTCTGGAAGACAGAAAAGTGGAATTAGCCACGTTCCTGCTTAAAAAAAGAGCAGAGGATTGA

Protein sequence

MEERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAED

Homology

[Close]

BLAST of MELO3C019151.2.1 vs. NCBI nr
Match: XP_016899851.1 (PREDICTED: uncharacterized protein LOC103487680 [Cucumis melo])

HSP 1 Score: 86.7 bits (213), Expect = 4.3e-14
Identity = 40/79 (50.63%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 6   FNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMH 65
           F + AQ ++   R   +DL+K YGIE++K LGAT F+G+ D  + E WL ++EKCF VM 
Sbjct: 42  FARSAQEISRPERARPSDLDKMYGIEQLKKLGATVFQGSTDPADAEVWLNMLEKCFDVMS 101

Query: 66  CLEDRKVELATFLLKKRAE 85
           C +++KV LATFLL+K AE
Sbjct: 102 CPQEQKVRLATFLLQKEAE 120

[Close]

BLAST of MELO3C019151.2.1 vs. NCBI nr
Match: XP_008448403.1 (PREDICTED: uncharacterized protein LOC103490604 [Cucumis melo])

HSP 1 Score: 86.3 bits (212), Expect = 5.6e-14
Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 0


Query: 6   FNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMH 65
           F + AQ +    R+  +D EK YGIER+K LGAT F+G+ D    E WL ++EKCF VM+
Sbjct: 42  FARSAQEIGRPERVGPSDPEKMYGIERLKKLGATVFEGSTDPANAEVWLNMLEKCFDVMN 101

Query: 66  CLEDRKVELATFLLKKRAE 85
           C + RKV L TFLL+K AE
Sbjct: 102 CPQKRKVRLTTFLLQKEAE 120

[Close]

BLAST of MELO3C019151.2.1 vs. NCBI nr
Match: KGN61535.1 (hypothetical protein Csa_2G163160 [Cucumis sativus])

HSP 1 Score: 84.3 bits (207), Expect = 2.1e-13
Identity = 44/84 (52.38%), Postives = 59/84 (70.24%), Query Frame = 0


Query: 2   EERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCF 61
           EE ++++ AQRL +   LAQ  L+K +GIER+KALGAT F G  +  E E W+  +EKCF
Sbjct: 21  EEALYDRFAQRLINA--LAQ-QLKKNFGIERVKALGATEFNGIENHEEAEKWIRTLEKCF 80

Query: 62  WVMHCLEDRKVELATFLLKKRAED 86
            VM C ++R+V LA FLL +RAED
Sbjct: 81  RVMQCPKERRVNLAVFLLLERAED 101

[Close]

BLAST of MELO3C019151.2.1 vs. NCBI nr
Match: XP_016900827.1 (PREDICTED: uncharacterized protein LOC107991043 [Cucumis melo])

HSP 1 Score: 83.2 bits (204), Expect = 4.7e-13
Identity = 39/67 (58.21%), Postives = 50/67 (74.63%), Query Frame = 0


Query: 18  RLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATF 77
           R   +D EK YGIER+K LGAT F+G++D  +VE WL ++EKCF VM+C E+RKV LATF
Sbjct: 59  RAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVMNCPEERKVRLATF 118

Query: 78  LLKKRAE 85
           L +K  E
Sbjct: 119 LSQKEDE 125

[Close]

BLAST of MELO3C019151.2.1 vs. NCBI nr
Match: XP_008456815.1 (PREDICTED: uncharacterized protein LOC103496653 [Cucumis melo])

HSP 1 Score: 78.6 bits (192), Expect = 1.2e-11
Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 28 YGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAE 85
          YGIER+K LGAT F+G+ D  + +AWL ++EKCF VM C ++RKV LATFLL+K AE
Sbjct: 2  YGIERLKKLGATVFEGSTDLADADAWLNMLEKCFDVMSCPQERKVRLATFLLQKEAE 58

[Close]

BLAST of MELO3C019151.2.1 vs. TrEMBL
Match: tr|A0A1S4DV40|A0A1S4DV40_CUCME (uncharacterized protein LOC103487680 OS=Cucumis melo OX=3656 GN=LOC103487680 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.8e-14
Identity = 40/79 (50.63%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 6   FNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMH 65
           F + AQ ++   R   +DL+K YGIE++K LGAT F+G+ D  + E WL ++EKCF VM 
Sbjct: 42  FARSAQEISRPERARPSDLDKMYGIEQLKKLGATVFQGSTDPADAEVWLNMLEKCFDVMS 101

Query: 66  CLEDRKVELATFLLKKRAE 85
           C +++KV LATFLL+K AE
Sbjct: 102 CPQEQKVRLATFLLQKEAE 120

[Close]

BLAST of MELO3C019151.2.1 vs. TrEMBL
Match: tr|A0A1S3BJ07|A0A1S3BJ07_CUCME (uncharacterized protein LOC103490604 OS=Cucumis melo OX=3656 GN=LOC103490604 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.7e-14
Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 0


Query: 6   FNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMH 65
           F + AQ +    R+  +D EK YGIER+K LGAT F+G+ D    E WL ++EKCF VM+
Sbjct: 42  FARSAQEIGRPERVGPSDPEKMYGIERLKKLGATVFEGSTDPANAEVWLNMLEKCFDVMN 101

Query: 66  CLEDRKVELATFLLKKRAE 85
           C + RKV L TFLL+K AE
Sbjct: 102 CPQKRKVRLTTFLLQKEAE 120

[Close]

BLAST of MELO3C019151.2.1 vs. TrEMBL
Match: tr|A0A0A0LI31|A0A0A0LI31_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G163160 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.4e-13
Identity = 44/84 (52.38%), Postives = 59/84 (70.24%), Query Frame = 0


Query: 2   EERIFNKIAQRLADGVRLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCF 61
           EE ++++ AQRL +   LAQ  L+K +GIER+KALGAT F G  +  E E W+  +EKCF
Sbjct: 21  EEALYDRFAQRLINA--LAQ-QLKKNFGIERVKALGATEFNGIENHEEAEKWIRTLEKCF 80

Query: 62  WVMHCLEDRKVELATFLLKKRAED 86
            VM C ++R+V LA FLL +RAED
Sbjct: 81  RVMQCPKERRVNLAVFLLLERAED 101

[Close]

BLAST of MELO3C019151.2.1 vs. TrEMBL
Match: tr|A0A1S4DXX0|A0A1S4DXX0_CUCME (uncharacterized protein LOC107991043 OS=Cucumis melo OX=3656 GN=LOC107991043 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-13
Identity = 39/67 (58.21%), Postives = 50/67 (74.63%), Query Frame = 0


Query: 18  RLAQADLEKKYGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATF 77
           R   +D EK YGIER+K LGAT F+G++D  +VE WL ++EKCF VM+C E+RKV LATF
Sbjct: 59  RAEPSDPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVMNCPEERKVRLATF 118

Query: 78  LLKKRAE 85
           L +K  E
Sbjct: 119 LSQKEDE 125

[Close]

BLAST of MELO3C019151.2.1 vs. TrEMBL
Match: tr|A0A1S3C3Q7|A0A1S3C3Q7_CUCME (uncharacterized protein LOC103496653 OS=Cucumis melo OX=3656 GN=LOC103496653 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 7.7e-12
Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 28 YGIERMKALGATPFKGTVDSVEVEAWLTLIEKCFWVMHCLEDRKVELATFLLKKRAE 85
          YGIER+K LGAT F+G+ D  + +AWL ++EKCF VM C ++RKV LATFLL+K AE
Sbjct: 2  YGIERLKKLGATVFEGSTDLADADAWLNMLEKCFDVMSCPQERKVRLATFLLQKEAE 58

The following BLAST results are available for this feature:

BLAST of MELO3C019151.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899851.1	4.3e-14	50.63	PREDICTED: uncharacterized protein LOC103487680 [Cucumis melo]	[more]
XP_008448403.1	5.6e-14	51.90	PREDICTED: uncharacterized protein LOC103490604 [Cucumis melo]	[more]
KGN61535.1	2.1e-13	52.38	hypothetical protein Csa_2G163160 [Cucumis sativus]	[more]
XP_016900827.1	4.7e-13	58.21	PREDICTED: uncharacterized protein LOC107991043 [Cucumis melo]	[more]
XP_008456815.1	1.2e-11	61.40	PREDICTED: uncharacterized protein LOC103496653 [Cucumis melo]	[more]

BLAST of MELO3C019151.2.1 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C019151.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C019151.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DV40\|A0A1S4DV40_CUCME	2.8e-14	50.63	uncharacterized protein LOC103487680 OS=Cucumis melo OX=3656 GN=LOC103487680 PE=...	[more]
tr\|A0A1S3BJ07\|A0A1S3BJ07_CUCME	3.7e-14	51.90	uncharacterized protein LOC103490604 OS=Cucumis melo OX=3656 GN=LOC103490604 PE=...	[more]
tr\|A0A0A0LI31\|A0A0A0LI31_CUCSA	1.4e-13	52.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G163160 PE=4 SV=1	[more]
tr\|A0A1S4DXX0\|A0A1S4DXX0_CUCME	3.1e-13	58.21	uncharacterized protein LOC107991043 OS=Cucumis melo OX=3656 GN=LOC107991043 PE=...	[more]
tr\|A0A1S3C3Q7\|A0A1S3C3Q7_CUCME	7.7e-12	61.40	uncharacterized protein LOC103496653 OS=Cucumis melo OX=3656 GN=LOC103496653 PE=...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016301	kinase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C019151.2	MELO3C019151.2	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C019151.2.1.CDS.1	MELO3C019151.2.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C019151.2.1.exon.1	MELO3C019151.2.1.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C019151.2.1	MELO3C019151.2.1-protein	polypeptide