MELO3C018769.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C018769.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Wound-responsive family protein
Location	chr01 : 2698748 .. 2699454 (-)
Sequence length	707

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAACAATACATCATGTTGGGTCCCACCCCACTTACCACCGGGAAAAAAACAAACAGACCAAAACCGGAGGCTTCTATTCCAAAGGCTGCGACCGCCTATGTATAAAAACCACCACTTCACAATCAAATTTCACCAACAAAATTTGGAATTGAAAAGCGATTATTGTAGAGAGAAGAAAGAAGAAAATGAGTTCATCAACAAGAGCGTTGATCGTAGCGGCCACCGTCGGCGTTGTGGAGGCACTTAAGGATCAAGGAATTTGCCGGTGGAATCATATCTTAAGATCGGCGCATCACTACGCCAGAAACCATGTTGGGTCTATTTCTCAGGCTAAGAAATTCTCCTCCGCCGTGTCTTCCGCCAACCGCCTCCAACAGTCGGAGGAATCTCTCAGAACAGTTATGTATCTTAGCTGTTGGGGTCCTAATAACTGAACCCACCTGAATCTTTCATCCAACCAGATACTCCGGTTGGACTGGCGGCTTTCCGAGTCAAAAAAGACATTGCTGTCCGGTTTTGGAGCACTTGAGCTCACTTTTATCTTCCTCCCTTCATCAGTTTGTAATTGTAATTAAATGTTTAATGGAGGATTTGGGAGCTAGTCTGATTCTTTCAACAACTGTAAACCCAATATTTCCCTTTATTAATACCGGATTATTGATTATTGAACATTTTAGCTTTTTTCCACTTTTCATTACCAAA

mRNA sequence

AAAAAAAACAATACATCATGTTGGGTCCCACCCCACTTACCACCGGGAAAAAAACAAACAGACCAAAACCGGAGGCTTCTATTCCAAAGGCTGCGACCGCCTATGTATAAAAACCACCACTTCACAATCAAATTTCACCAACAAAATTTGGAATTGAAAAGCGATTATTGTAGAGAGAAGAAAGAAGAAAATGAGTTCATCAACAAGAGCGTTGATCGTAGCGGCCACCGTCGGCGTTGTGGAGGCACTTAAGGATCAAGGAATTTGCCGGTGGAATCATATCTTAAGATCGGCGCATCACTACGCCAGAAACCATGTTGGGTCTATTTCTCAGGCTAAGAAATTCTCCTCCGCCGTGTCTTCCGCCAACCGCCTCCAACAGTCGGAGGAATCTCTCAGAACAGTTATGTATCTTAGCTGTTGGGGTCCTAATAACTGAACCCACCTGAATCTTTCATCCAACCAGATACTCCGGTTGGACTGGCGGCTTTCCGAGTCAAAAAAGACATTGCTGTCCGGTTTTGGAGCACTTGAGCTCACTTTTATCTTCCTCCCTTCATCAGTTTGTAATTGTAATTAAATGTTTAATGGAGGATTTGGGAGCTAGTCTGATTCTTTCAACAACTGTAAACCCAATATTTCCCTTTATTAATACCGGATTATTGATTATTGAACATTTTAGCTTTTTTCCACTTTTCATTACCAAA

Coding sequence (CDS)

ATGAGTTCATCAACAAGAGCGTTGATCGTAGCGGCCACCGTCGGCGTTGTGGAGGCACTTAAGGATCAAGGAATTTGCCGGTGGAATCATATCTTAAGATCGGCGCATCACTACGCCAGAAACCATGTTGGGTCTATTTCTCAGGCTAAGAAATTCTCCTCCGCCGTGTCTTCCGCCAACCGCCTCCAACAGTCGGAGGAATCTCTCAGAACAGTTATGTATCTTAGCTGTTGGGGTCCTAATAACTGA

Protein sequence

MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSANRLQQSEESLRTVMYLSCWGPNN

Homology

[Close]

BLAST of MELO3C018769.2.1 vs. NCBI nr
Match: XP_008455358.1 (PREDICTED: uncharacterized protein LOC103495544 [Cucumis melo])

HSP 1 Score: 163.7 bits (413), Expect = 2.7e-37
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSAN 60
          MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSAN
Sbjct: 1  MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSAN 60

Query: 61 RLQQSEESLRTVMYLSCWGPNN 83
          RLQQSEESLRTVMYLSCWGPNN
Sbjct: 61 RLQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of MELO3C018769.2.1 vs. NCBI nr
Match: XP_004136807.1 (PREDICTED: uncharacterized protein LOC101222779 [Cucumis sativus] >KGN43577.1 hypothetical protein Csa_7G046650 [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 1.3e-36
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 1  MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSAN 60
          MSSSTRAL VAATVGVVEALKDQGICRWNHILRSAHHYARNHVGS+SQAKKFSSAVSSAN
Sbjct: 1  MSSSTRALFVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSLSQAKKFSSAVSSAN 60

Query: 61 RLQQSEESLRTVMYLSCWGPNN 83
          RLQQSEESLRTVMYLSCWGPNN
Sbjct: 61 RLQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of MELO3C018769.2.1 vs. NCBI nr
Match: XP_004136808.1 (PREDICTED: uncharacterized protein LOC101223015 [Cucumis sativus] >XP_008455359.1 PREDICTED: uncharacterized protein LOC103495545 [Cucumis melo] >KGN43576.1 hypothetical protein Csa_7G046640 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 2.7e-34
Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 1  MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSAN 60
          MSSSTRAL+VAATVGVVEALKDQGICRWNH+LRSAHHYARNHV SISQAKK SSAV SAN
Sbjct: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60

Query: 61 RLQQSEESLRTVMYLSCWGPNN 83
          R QQSEESLRTVMYLSCWGPNN
Sbjct: 61 RFQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of MELO3C018769.2.1 vs. NCBI nr
Match: XP_023554653.1 (uncharacterized protein LOC111811841 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 145.6 bits (366), Expect = 7.5e-32
Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 1  MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSA- 60
          MSSSTRALIVAA+VGVVEALKDQGICRWNH++RSAHHYA+NHVGSISQAKKFSSAV+ A 
Sbjct: 1  MSSSTRALIVAASVGVVEALKDQGICRWNHLIRSAHHYAKNHVGSISQAKKFSSAVAPAP 60

Query: 61 -NRLQQSEESLRTVMYLSCWGPNN 83
            +L QSEESLRTVMYLSCWGPNN
Sbjct: 61 GKQLHQSEESLRTVMYLSCWGPNN 84

[Close]

BLAST of MELO3C018769.2.1 vs. NCBI nr
Match: XP_022969312.1 (uncharacterized protein LOC111468356 [Cucurbita maxima])

HSP 1 Score: 143.7 bits (361), Expect = 2.8e-31
Identity = 72/84 (85.71%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 1  MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSA- 60
          MSSSTRALIVAA+VGVVEALKDQGICRWNH++RSAHHYA++HVGSISQAKKFSSAV+ A 
Sbjct: 1  MSSSTRALIVAASVGVVEALKDQGICRWNHLIRSAHHYAKSHVGSISQAKKFSSAVAPAP 60

Query: 61 -NRLQQSEESLRTVMYLSCWGPNN 83
            +L QSEESLRTVMYLSCWGPNN
Sbjct: 61 GKQLHQSEESLRTVMYLSCWGPNN 84

[Close]

BLAST of MELO3C018769.2.1 vs. TAIR10
Match: AT4G10265.1 (Wound-responsive family protein)

HSP 1 Score: 104.0 bits (258), Expect = 4.5e-23
Identity = 50/83 (60.24%), Postives = 70/83 (84.34%), Query Frame = 0


Query: 1  MSSSTRALIVAATVGVVEALKDQ-GICRWNHILRSAHHYARNHVGSISQAKKF-SSAVSS 60
          MSS+++  +VAA++G VEALKDQ G+CRWN+++RSA+ Y RN++ S+SQAKK  SS++  
Sbjct: 1  MSSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSSSIDY 60

Query: 61 ANRLQQSEESLRTVMYLSCWGPN 82
           N+ +Q+EESLRTVMYLSCWGP+
Sbjct: 61 TNKTKQAEESLRTVMYLSCWGPS 83

[Close]

BLAST of MELO3C018769.2.1 vs. TAIR10
Match: AT4G10270.1 (Wound-responsive family protein)

HSP 1 Score: 97.8 bits (242), Expect = 3.2e-21
Identity = 51/90 (56.67%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 1  MSSSTRALIVAATVGVVEALKDQ-GICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSA 60
          MSS+++A  VA ++G VEALKDQ G+CRWN+ILRS + + RN+V S+SQ K+FSS+  SA
Sbjct: 1  MSSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSA 60

Query: 61 --------NRLQQSEESLRTVMYLSCWGPN 82
                   + +++EESLRTVMYLSCWGPN
Sbjct: 61 AVTSSGESEKAKKAEESLRTVMYLSCWGPN 90

[Close]

BLAST of MELO3C018769.2.1 vs. TAIR10
Match: AT4G33560.1 (Wound-responsive family protein)

HSP 1 Score: 46.2 bits (108), Expect = 1.1e-05
Identity = 28/80 (35.00%), Postives = 38/80 (47.50%), Query Frame = 0


Query: 10 VAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSANRLQ------ 69
          VA  +  VE LKDQG+ RWN++ R  H  A   V +I+   + S   SS++         
Sbjct: 11 VATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRSKPL 70

Query: 70 ---QSEESLRTVMYLSCWGP 81
               E S    M LSC+GP
Sbjct: 71 STTPFETSFEKAMGLSCFGP 90

[Close]

BLAST of MELO3C018769.2.1 vs. TAIR10
Match: AT4G05070.1 (Wound-responsive family protein)

HSP 1 Score: 41.2 bits (95), Expect = 3.6e-04
Identity = 19/32 (59.38%), Postives = 26/32 (81.25%), Query Frame = 0


Query: 48 QAKKFSSAVSSANRLQQSEESLRTVMYLSCWG 80
          ++ +F +A S   RL+Q+EESLRTVM+LSCWG
Sbjct: 56 ESSRFGAAAS--ERLRQAEESLRTVMFLSCWG 85

[Close]

BLAST of MELO3C018769.2.1 vs. TrEMBL
Match: tr|A0A1S3C1Y6|A0A1S3C1Y6_CUCME (uncharacterized protein LOC103495544 OS=Cucumis melo OX=3656 GN=LOC103495544 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.8e-37
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSAN 60
          MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSAN
Sbjct: 1  MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSAN 60

Query: 61 RLQQSEESLRTVMYLSCWGPNN 83
          RLQQSEESLRTVMYLSCWGPNN
Sbjct: 61 RLQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of MELO3C018769.2.1 vs. TrEMBL
Match: tr|A0A0A0K5N2|A0A0A0K5N2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046650 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 8.7e-37
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 1  MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSAN 60
          MSSSTRAL VAATVGVVEALKDQGICRWNHILRSAHHYARNHVGS+SQAKKFSSAVSSAN
Sbjct: 1  MSSSTRALFVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSLSQAKKFSSAVSSAN 60

Query: 61 RLQQSEESLRTVMYLSCWGPNN 83
          RLQQSEESLRTVMYLSCWGPNN
Sbjct: 61 RLQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of MELO3C018769.2.1 vs. TrEMBL
Match: tr|A0A1S3C0A5|A0A1S3C0A5_CUCME (uncharacterized protein LOC103495545 OS=Cucumis melo OX=3656 GN=LOC103495545 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.8e-34
Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 1  MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSAN 60
          MSSSTRAL+VAATVGVVEALKDQGICRWNH+LRSAHHYARNHV SISQAKK SSAV SAN
Sbjct: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60

Query: 61 RLQQSEESLRTVMYLSCWGPNN 83
          R QQSEESLRTVMYLSCWGPNN
Sbjct: 61 RFQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of MELO3C018769.2.1 vs. TrEMBL
Match: tr|A0A0A0K6Y8|A0A0A0K6Y8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046640 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.8e-34
Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 1  MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSAN 60
          MSSSTRAL+VAATVGVVEALKDQGICRWNH+LRSAHHYARNHV SISQAKK SSAV SAN
Sbjct: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60

Query: 61 RLQQSEESLRTVMYLSCWGPNN 83
          R QQSEESLRTVMYLSCWGPNN
Sbjct: 61 RFQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of MELO3C018769.2.1 vs. TrEMBL
Match: tr|A0A1S3C1F8|A0A1S3C1F8_CUCME (uncharacterized protein LOC103495543 OS=Cucumis melo OX=3656 GN=LOC103495543 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 8.5e-24
Identity = 61/85 (71.76%), Postives = 69/85 (81.18%), Query Frame = 0


Query: 1  MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKF----SSAV 60
          MSSS RA IVAA+VGVVEALKDQGICRWNH +RSAH YARNHV S+ QA +     ++ V
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60

Query: 61 SSANRLQQSEESLRTVMYLSCWGPN 82
          SS  + +QSEESLRTVMYLSCWGPN
Sbjct: 61 SSKPQQKQSEESLRTVMYLSCWGPN 85

The following BLAST results are available for this feature:

BLAST of MELO3C018769.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455358.1	2.7e-37	100.00	PREDICTED: uncharacterized protein LOC103495544 [Cucumis melo]	[more]
XP_004136807.1	1.3e-36	97.56	PREDICTED: uncharacterized protein LOC101222779 [Cucumis sativus] >KGN43577.1 hy...	[more]
XP_004136808.1	2.7e-34	92.68	PREDICTED: uncharacterized protein LOC101223015 [Cucumis sativus] >XP_008455359....	[more]
XP_023554653.1	7.5e-32	86.90	uncharacterized protein LOC111811841 [Cucurbita pepo subsp. pepo]	[more]
XP_022969312.1	2.8e-31	85.71	uncharacterized protein LOC111468356 [Cucurbita maxima]	[more]

BLAST of MELO3C018769.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10265.1	4.5e-23	60.24	Wound-responsive family protein	[more]
AT4G10270.1	3.2e-21	56.67	Wound-responsive family protein	[more]
AT4G33560.1	1.1e-05	35.00	Wound-responsive family protein	[more]
AT4G05070.1	3.6e-04	59.38	Wound-responsive family protein	[more]

BLAST of MELO3C018769.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C018769.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C1Y6\|A0A1S3C1Y6_CUCME	1.8e-37	100.00	uncharacterized protein LOC103495544 OS=Cucumis melo OX=3656 GN=LOC103495544 PE=...	[more]
tr\|A0A0A0K5N2\|A0A0A0K5N2_CUCSA	8.7e-37	97.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046650 PE=4 SV=1	[more]
tr\|A0A1S3C0A5\|A0A1S3C0A5_CUCME	1.8e-34	92.68	uncharacterized protein LOC103495545 OS=Cucumis melo OX=3656 GN=LOC103495545 PE=...	[more]
tr\|A0A0A0K6Y8\|A0A0A0K6Y8_CUCSA	1.8e-34	92.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046640 PE=4 SV=1	[more]
tr\|A0A1S3C1F8\|A0A1S3C1F8_CUCME	8.5e-24	71.76	uncharacterized protein LOC103495543 OS=Cucumis melo OX=3656 GN=LOC103495543 PE=...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR022251	DUF3774_wound-induced

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C018769.2	MELO3C018769.2	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C018769.2.1.five_prime_UTR.1	MELO3C018769.2.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C018769.2.1.CDS.1	MELO3C018769.2.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C018769.2.1.exon.1	MELO3C018769.2.1.exon.1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C018769.2.1.three_prime_UTR.1	MELO3C018769.2.1.three_prime_UTR.1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C018769.2.1	MELO3C018769.2.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 10..80 e-value: 5.0E-32 score: 110.7
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	FAMILY NOT NAMED	coord: 1..81