MELO3C018767.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C018767.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Wound-responsive family protein
Location	chr01 : 2694644 .. 2695227 (-)
Sequence length	584

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACAAAACCTGGGGGCGCTGTTTTTCCATCTATAGTAATCTAATCTAATCTAATCTCTGATACAGTTCTATATATAATCAGCAAATCCCAATTCATTTCCAAGCATCCAAATTTCAAACACAGAGATAACCAAAAATGAGTTGTTCCAGAAAAGGTTGGGTTGTAGCCGCAAGTGTTGGAGTGGTGGAGGCTTTGAAAGATCAAGGGATTTGCCGATGGAATCATACCATTAGATCCCTTCAACAATACGCTAAAAATCATGTTCGATCCATTTCTCAGGCTAAGAAGCTTTCTTCTCCCTCCGCTGCCACCGTTTCCGATCACAGATGGAAGCAGTCCGAGGAATCTTTGAGGACTGTCATGTACTTGAGCTGTTGGGGCCCTAATAACTGATCATTTCTTTACTCTATTACATTACTATTGTGTATATGTATATATATCCACTTCAATTCAAAATCAATGGAAGAGTTTTTCTTAATCATTTTTTCTTTTTTGGTTTTTAATTTTATTTAATAATTTAATGAATTGAGTTGTCATGATCATCAGAGAGATTTGCAAATCTTAAAAGATGGTTTGAAGTCT

mRNA sequence

AAAACAAAACCTGGGGGCGCTGTTTTTCCATCTATAGTAATCTAATCTAATCTAATCTCTGATACAGTTCTATATATAATCAGCAAATCCCAATTCATTTCCAAGCATCCAAATTTCAAACACAGAGATAACCAAAAATGAGTTGTTCCAGAAAAGGTTGGGTTGTAGCCGCAAGTGTTGGAGTGGTGGAGGCTTTGAAAGATCAAGGGATTTGCCGATGGAATCATACCATTAGATCCCTTCAACAATACGCTAAAAATCATGTTCGATCCATTTCTCAGGCTAAGAAGCTTTCTTCTCCCTCCGCTGCCACCGTTTCCGATCACAGATGGAAGCAGTCCGAGGAATCTTTGAGGACTGTCATGTACTTGAGCTGTTGGGGCCCTAATAACTGATCATTTCTTTACTCTATTACATTACTATTGTGTATATGTATATATATCCACTTCAATTCAAAATCAATGGAAGAGTTTTTCTTAATCATTTTTTCTTTTTTGGTTTTTAATTTTATTTAATAATTTAATGAATTGAGTTGTCATGATCATCAGAGAGATTTGCAAATCTTAAAAGATGGTTTGAAGTCT

Coding sequence (CDS)

ATGAGTTGTTCCAGAAAAGGTTGGGTTGTAGCCGCAAGTGTTGGAGTGGTGGAGGCTTTGAAAGATCAAGGGATTTGCCGATGGAATCATACCATTAGATCCCTTCAACAATACGCTAAAAATCATGTTCGATCCATTTCTCAGGCTAAGAAGCTTTCTTCTCCCTCCGCTGCCACCGTTTCCGATCACAGATGGAAGCAGTCCGAGGAATCTTTGAGGACTGTCATGTACTTGAGCTGTTGGGGCCCTAATAACTGA

Protein sequence

MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATVSDHRWKQSEESLRTVMYLSCWGPNN

Homology

[Close]

BLAST of MELO3C018767.2.1 vs. NCBI nr
Match: XP_008455355.1 (PREDICTED: uncharacterized protein LOC103495542 [Cucumis melo])

HSP 1 Score: 178.3 bits (451), Expect = 1.1e-41
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60
          MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV
Sbjct: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60

Query: 61 SDHRWKQSEESLRTVMYLSCWGPNN 86
          SDHRWKQSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHRWKQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of MELO3C018767.2.1 vs. NCBI nr
Match: XP_004136809.1 (PREDICTED: uncharacterized protein LOC101202743 [Cucumis sativus] >KGN43579.1 hypothetical protein Csa_7G046670 [Cucumis sativus])

HSP 1 Score: 171.4 bits (433), Expect = 1.3e-39
Identity = 81/85 (95.29%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60
          MSC RKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAA V
Sbjct: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60

Query: 61 SDHRWKQSEESLRTVMYLSCWGPNN 86
          SDH+W QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of MELO3C018767.2.1 vs. NCBI nr
Match: XP_023554652.1 (uncharacterized protein LOC111811840 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 160.2 bits (404), Expect = 3.0e-36
Identity = 74/85 (87.06%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60
          MS SR+ WVVAASVGVVEALKDQG+CRWNHTI+S+QQYAKNHVRS+SQAKKLSSPS A V
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHTIKSVQQYAKNHVRSVSQAKKLSSPSTAAV 60

Query: 61 SDHRWKQSEESLRTVMYLSCWGPNN 86
          SD +WKQSEESLRTVMYLSCWGPNN
Sbjct: 61 SDQKWKQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of MELO3C018767.2.1 vs. NCBI nr
Match: XP_022952158.1 (uncharacterized protein LOC111454919 [Cucurbita moschata])

HSP 1 Score: 158.3 bits (399), Expect = 1.2e-35
Identity = 73/85 (85.88%), Postives = 79/85 (92.94%), Query Frame = 0


Query: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60
          MS SR+ WVVAASVGVVEALKDQG+CRWNH I+S+QQYAKNHVRS+SQAKKLSSPS A V
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHAIKSVQQYAKNHVRSVSQAKKLSSPSTAAV 60

Query: 61 SDHRWKQSEESLRTVMYLSCWGPNN 86
          SD +WKQSEESLRTVMYLSCWGPNN
Sbjct: 61 SDQKWKQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of MELO3C018767.2.1 vs. NCBI nr
Match: XP_022969311.1 (uncharacterized protein LOC111468355 [Cucurbita maxima])

HSP 1 Score: 157.1 bits (396), Expect = 2.6e-35
Identity = 73/85 (85.88%), Postives = 79/85 (92.94%), Query Frame = 0


Query: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60
          MS SR+ WVVAASVGVVEALKDQG+CRWNHTI+S+QQYAKNHVRS+SQAKKLSS S A V
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHTIKSVQQYAKNHVRSVSQAKKLSSTSTAAV 60

Query: 61 SDHRWKQSEESLRTVMYLSCWGPNN 86
          SD +WKQSEESLRTVMYLSCWGPNN
Sbjct: 61 SDQKWKQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of MELO3C018767.2.1 vs. TAIR10
Match: AT4G10265.1 (Wound-responsive family protein)

HSP 1 Score: 109.8 bits (273), Expect = 8.5e-25
Identity = 55/85 (64.71%), Postives = 68/85 (80.00%), Query Frame = 0


Query: 1  MSCSRKGWVVAASVGVVEALKDQ-GICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAT 60
          MS + K W+VAAS+G VEALKDQ G+CRWN+ IRS  QY +N++RS+SQAKKLSS S   
Sbjct: 1  MSSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSSSIDY 60

Query: 61 VSDHRWKQSEESLRTVMYLSCWGPN 85
             ++ KQ+EESLRTVMYLSCWGP+
Sbjct: 61 T--NKTKQAEESLRTVMYLSCWGPS 83

[Close]

BLAST of MELO3C018767.2.1 vs. TAIR10
Match: AT4G10270.1 (Wound-responsive family protein)

HSP 1 Score: 103.6 bits (257), Expect = 6.1e-23
Identity = 50/90 (55.56%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 1  MSCSRKGWVVAASVGVVEALKDQ-GICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAT 60
          MS + K W VA S+G VEALKDQ G+CRWN+ +RS+ Q+ +N+VRS+SQ K+ SS S + 
Sbjct: 1  MSSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSA 60

Query: 61 V-----SDHRWKQSEESLRTVMYLSCWGPN 85
                   + K++EESLRTVMYLSCWGPN
Sbjct: 61 AVTSSGESEKAKKAEESLRTVMYLSCWGPN 90

[Close]

BLAST of MELO3C018767.2.1 vs. TAIR10
Match: AT4G33560.1 (Wound-responsive family protein)

HSP 1 Score: 55.1 bits (131), Expect = 2.5e-08
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 8  WVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSP-SAATVSDHRWK 67
          W VA ++  VE LKDQG+ RWN+  R L + A   VR+I+   + S P S+++ +  R K
Sbjct: 9  WAVATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRSK 68

Query: 68 -----QSEESLRTVMYLSCWGP 84
                 E S    M LSC+GP
Sbjct: 69 PLSTTPFETSFEKAMGLSCFGP 90

[Close]

BLAST of MELO3C018767.2.1 vs. TrEMBL
Match: tr|A0A1S3C0Q4|A0A1S3C0Q4_CUCME (uncharacterized protein LOC103495542 OS=Cucumis melo OX=3656 GN=LOC103495542 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 7.1e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60
          MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV
Sbjct: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60

Query: 61 SDHRWKQSEESLRTVMYLSCWGPNN 86
          SDHRWKQSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHRWKQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of MELO3C018767.2.1 vs. TrEMBL
Match: tr|A0A0A0K3P5|A0A0A0K3P5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046670 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 8.7e-40
Identity = 81/85 (95.29%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60
          MSC RKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAA V
Sbjct: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60

Query: 61 SDHRWKQSEESLRTVMYLSCWGPNN 86
          SDH+W QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of MELO3C018767.2.1 vs. TrEMBL
Match: tr|A0A1S3C1F8|A0A1S3C1F8_CUCME (uncharacterized protein LOC103495543 OS=Cucumis melo OX=3656 GN=LOC103495543 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.4e-28
Identity = 65/85 (76.47%), Postives = 72/85 (84.71%), Query Frame = 0


Query: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60
          MS SR+ W+VAASVGVVEALKDQGICRWNHTIRS  QYA+NHVRS+ QA +L+  SAA V
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60

Query: 61 SDH-RWKQSEESLRTVMYLSCWGPN 85
          S   + KQSEESLRTVMYLSCWGPN
Sbjct: 61 SSKPQQKQSEESLRTVMYLSCWGPN 85

[Close]

BLAST of MELO3C018767.2.1 vs. TrEMBL
Match: tr|A0A218X2B0|A0A218X2B0_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr002782 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.8e-27
Identity = 64/88 (72.73%), Postives = 72/88 (81.82%), Query Frame = 0


Query: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60
          MS S++ WVVA SVG VEALKDQG CRWN+TIRSL Q+AKNH RS+SQAKKLSS SAA V
Sbjct: 1  MSLSKRAWVVAVSVGAVEALKDQGFCRWNYTIRSLHQHAKNHARSVSQAKKLSSQSAAAV 60

Query: 61 S----DHRWKQSEESLRTVMYLSCWGPN 85
          S    D + K++EESLR VMYLSCWGPN
Sbjct: 61 SRVRDDEKVKRAEESLRKVMYLSCWGPN 88

[Close]

BLAST of MELO3C018767.2.1 vs. TrEMBL
Match: tr|A0A0D2PKH2|A0A0D2PKH2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G206000 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.8e-27
Identity = 62/86 (72.09%), Postives = 74/86 (86.05%), Query Frame = 0


Query: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60
          MS + + WVVAAS+G VEALKDQGICRWN+T+RS+ Q+AKNHVRS SQAK LSS S+A +
Sbjct: 1  MSSTSRAWVVAASIGAVEALKDQGICRWNYTVRSVVQHAKNHVRSASQAKNLSSQSSAAI 60

Query: 61 SD--HRWKQSEESLRTVMYLSCWGPN 85
          S   +++KQSEESLRTVMYLSCWGPN
Sbjct: 61 SKGLNKYKQSEESLRTVMYLSCWGPN 86

The following BLAST results are available for this feature:

BLAST of MELO3C018767.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455355.1	1.1e-41	100.00	PREDICTED: uncharacterized protein LOC103495542 [Cucumis melo]	[more]
XP_004136809.1	1.3e-39	95.29	PREDICTED: uncharacterized protein LOC101202743 [Cucumis sativus] >KGN43579.1 hy...	[more]
XP_023554652.1	3.0e-36	87.06	uncharacterized protein LOC111811840 [Cucurbita pepo subsp. pepo]	[more]
XP_022952158.1	1.2e-35	85.88	uncharacterized protein LOC111454919 [Cucurbita moschata]	[more]
XP_022969311.1	2.6e-35	85.88	uncharacterized protein LOC111468355 [Cucurbita maxima]	[more]

BLAST of MELO3C018767.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10265.1	8.5e-25	64.71	Wound-responsive family protein	[more]
AT4G10270.1	6.1e-23	55.56	Wound-responsive family protein	[more]
AT4G33560.1	2.5e-08	39.02	Wound-responsive family protein	[more]

BLAST of MELO3C018767.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C018767.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C0Q4\|A0A1S3C0Q4_CUCME	7.1e-42	100.00	uncharacterized protein LOC103495542 OS=Cucumis melo OX=3656 GN=LOC103495542 PE=...	[more]
tr\|A0A0A0K3P5\|A0A0A0K3P5_CUCSA	8.7e-40	95.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046670 PE=4 SV=1	[more]
tr\|A0A1S3C1F8\|A0A1S3C1F8_CUCME	3.4e-28	76.47	uncharacterized protein LOC103495543 OS=Cucumis melo OX=3656 GN=LOC103495543 PE=...	[more]
tr\|A0A218X2B0\|A0A218X2B0_PUNGR	3.8e-27	72.73	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr002782 PE=4 SV=1	[more]
tr\|A0A0D2PKH2\|A0A0D2PKH2_GOSRA	3.8e-27	72.09	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G206000 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR022251	DUF3774_wound-induced

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C018767.2	MELO3C018767.2	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C018767.2.1.five_prime_UTR.1	MELO3C018767.2.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C018767.2.1.CDS.1	MELO3C018767.2.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C018767.2.1.three_prime_UTR.1	MELO3C018767.2.1.three_prime_UTR.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C018767.2.1.exon.1	MELO3C018767.2.1.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C018767.2.1	MELO3C018767.2.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 10..83 e-value: 3.7E-34 score: 117.5
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	FAMILY NOT NAMED	coord: 1..84
None	No IPR available	PANTHER	PTHR33090:SF8	SUBFAMILY NOT NAMED	coord: 1..84