MELO3C018568.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C018568.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	E3 ubiquitin-protein ligase
Location	chr01 : 1146842 .. 1147624 (+)
Sequence length	783

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGAACAAAACCTCGATGCTTGTATGTCTGCAGGTTACTACATGGGTATGTCCTTAAGAATTACCGATCCCGACCTAAGGCATCGTCAACCACAAAGCCAAATTCAAACTCAACCTAACTCGCCAGCACTTGTCAAACAAATCGACCTGAACTTCAAACTTCAAGTCAAATGCCAACACTTTGGAGCAGGTGAAGAAGGCAGCACATTTGCAACAACTTTACTTAGTGAACACATAATCTCACAACCTACCTTTCCTGCTTTGCAACTTCCTATCTCCATCTTCAAGCGTGGTGATAAAACTTTGAAGCGATTACTTTTCCAGAAGTTTCAGATGTTTAGAGGCATCGTCAACGTTGAACTTGTGGTTGATGAAATAATAAAACATTGGATTAGAAAAGTTGAAGAAGATCAAGAGAATAATTCTAGGGTGTTTGCAGAGATTTATCCTCTGGAAATTAGGATAGAGTTGTTGGTTTGTCGAATGATTCCTGCAATAATAGACCAACCACAAGAAGTAATGATGGTTCCAACAAGCGACAATGCAATGGAGAGTATGCTAAAGAGAGTGGAGAACAACGAAGAACTAATGAAATTAGGTGACGACAGTATTGATTGTGTTATTTGCTTGGAGAAAATTGGTAAAGAGGAGAAAAGAAGTGGGAGGGTGGTGTTACAAATGCCATGTTTGCATATGTTTCATGAAGAATGTATAAGGAAGTGGTTGAAGACAAGTCATTTCTGTCCAACTTGTAGATTTTCAATGCCTATAAACAATTGA

mRNA sequence

ATGGCCGAACAAAACCTCGATGCTTGTATGTCTGCAGGTTACTACATGGGTATGTCCTTAAGAATTACCGATCCCGACCTAAGGCATCGTCAACCACAAAGCCAAATTCAAACTCAACCTAACTCGCCAGCACTTGTCAAACAAATCGACCTGAACTTCAAACTTCAAGTCAAATGCCAACACTTTGGAGCAGGTGAAGAAGGCAGCACATTTGCAACAACTTTACTTAGTGAACACATAATCTCACAACCTACCTTTCCTGCTTTGCAACTTCCTATCTCCATCTTCAAGCGTGGTGATAAAACTTTGAAGCGATTACTTTTCCAGAAGTTTCAGATGTTTAGAGGCATCGTCAACGTTGAACTTGTGGTTGATGAAATAATAAAACATTGGATTAGAAAAGTTGAAGAAGATCAAGAGAATAATTCTAGGGTGTTTGCAGAGATTTATCCTCTGGAAATTAGGATAGAGTTGTTGGTTTGTCGAATGATTCCTGCAATAATAGACCAACCACAAGAAGTAATGATGGTTCCAACAAGCGACAATGCAATGGAGAGTATGCTAAAGAGAGTGGAGAACAACGAAGAACTAATGAAATTAGGTGACGACAGTATTGATTGTGTTATTTGCTTGGAGAAAATTGGTAAAGAGGAGAAAAGAAGTGGGAGGGTGGTGTTACAAATGCCATGTTTGCATATGTTTCATGAAGAATGTATAAGGAAGTGGTTGAAGACAAGTCATTTCTGTCCAACTTGTAGATTTTCAATGCCTATAAACAATTGA

Coding sequence (CDS)

ATGGCCGAACAAAACCTCGATGCTTGTATGTCTGCAGGTTACTACATGGGTATGTCCTTAAGAATTACCGATCCCGACCTAAGGCATCGTCAACCACAAAGCCAAATTCAAACTCAACCTAACTCGCCAGCACTTGTCAAACAAATCGACCTGAACTTCAAACTTCAAGTCAAATGCCAACACTTTGGAGCAGGTGAAGAAGGCAGCACATTTGCAACAACTTTACTTAGTGAACACATAATCTCACAACCTACCTTTCCTGCTTTGCAACTTCCTATCTCCATCTTCAAGCGTGGTGATAAAACTTTGAAGCGATTACTTTTCCAGAAGTTTCAGATGTTTAGAGGCATCGTCAACGTTGAACTTGTGGTTGATGAAATAATAAAACATTGGATTAGAAAAGTTGAAGAAGATCAAGAGAATAATTCTAGGGTGTTTGCAGAGATTTATCCTCTGGAAATTAGGATAGAGTTGTTGGTTTGTCGAATGATTCCTGCAATAATAGACCAACCACAAGAAGTAATGATGGTTCCAACAAGCGACAATGCAATGGAGAGTATGCTAAAGAGAGTGGAGAACAACGAAGAACTAATGAAATTAGGTGACGACAGTATTGATTGTGTTATTTGCTTGGAGAAAATTGGTAAAGAGGAGAAAAGAAGTGGGAGGGTGGTGTTACAAATGCCATGTTTGCATATGTTTCATGAAGAATGTATAAGGAAGTGGTTGAAGACAAGTCATTTCTGTCCAACTTGTAGATTTTCAATGCCTATAAACAATTGA

Protein sequence

MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQHFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNVELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTSDNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFSMPINN

Homology

[Close]

BLAST of MELO3C018568.2.1 vs. NCBI nr
Match: ADN34253.1 (hypothetical zinc finger protein [Cucumis melo subsp. melo])

HSP 1 Score: 528.5 bits (1360), Expect = 1.3e-146
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60
           MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ
Sbjct: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60

Query: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV 120
           HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV
Sbjct: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV 120

Query: 121 ELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTS 180
           ELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTS
Sbjct: 121 ELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTS 180

Query: 181 DNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIR 240
           DNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIR
Sbjct: 181 DNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIR 240

Query: 241 KWLKTSHFCPTCRFSMPINN 261
           KWLKTSHFCPTCRFSMPINN
Sbjct: 241 KWLKTSHFCPTCRFSMPINN 260

[Close]

BLAST of MELO3C018568.2.1 vs. NCBI nr
Match: KGN43800.1 (hypothetical protein Csa_7G067550 [Cucumis sativus])

HSP 1 Score: 379.0 bits (972), Expect = 1.3e-101
Identity = 198/267 (74.16%), Postives = 219/267 (82.02%), Query Frame = 0


Query: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60
           MAEQN D C S GYYMGMSLRITDP          IQT+ NSP  VKQIDLNFK++VKCQ
Sbjct: 1   MAEQNFDDCTS-GYYMGMSLRITDP----------IQTRSNSPTSVKQIDLNFKVEVKCQ 60

Query: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV 120
           HF AGEE +TFATT LSEHII+   FPALQLP+SIFK GDKTLKRLLFQKFQMFR I+N+
Sbjct: 61  HFQAGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINI 120

Query: 121 ELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAIIDQPQE------V 180
           ELV D+IIKHW++KVE+D+ENNS VF EIYPLEI IE+LV +MI A +DQPQE      V
Sbjct: 121 ELVTDQIIKHWVKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDA-VDQPQETIDQPQV 180

Query: 181 MMVPTSDNAMESMLKRVENNEELMKLGD-DSIDCVICLEKIGKEEKRSGRVVLQMPCLHM 240
            MVPTSD+AM+SMLKRVE NEE+MK+GD  SI CVICLEKI KEEK S  VVLQMPCLHM
Sbjct: 181 RMVPTSDSAMKSMLKRVE-NEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHM 240

Query: 241 FHEECIRKWLKTSHFCPTCRFSMPINN 261
           FHEECIRKWLKTSH+CPTCRFSM INN
Sbjct: 241 FHEECIRKWLKTSHYCPTCRFSMTINN 254

[Close]

BLAST of MELO3C018568.2.1 vs. NCBI nr
Match: KGN43801.1 (hypothetical protein Csa_7G067560 [Cucumis sativus])

HSP 1 Score: 358.6 bits (919), Expect = 1.8e-95
Identity = 193/271 (71.22%), Postives = 223/271 (82.29%), Query Frame = 0


Query: 1   MAEQNLDAC-MSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKC 60
           MAEQ    C   +G Y+GMSLRITDPDLRH QPQSQI+T PNSP LVKQIDLNFK++VKC
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRH-QPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60

Query: 61  QH-FGAGEEG-STFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGI 120
           QH F AGE G STFAT LLSEHI S    P LQLP+SIFK GDKTLKRLLF++FQ++R I
Sbjct: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120

Query: 121 VNVELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAI-------IDQ 180
           +N+ELVVDEIIKHW++KV+E + + S+VF EIYPLEI IELLV +MI AI       +DQ
Sbjct: 121 INIELVVDEIIKHWVKKVDE-ENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQ 180

Query: 181 PQEVMMVPTSDNAMESMLKRVENNEELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMP 240
           PQ VMMVPTS++AMESMLK+VE NEE++K GD+ SI+CVICLE+I KE+K S  VVLQMP
Sbjct: 181 PQ-VMMVPTSESAMESMLKKVE-NEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMP 240

Query: 241 CLHMFHEECIRKWLKTSHFCPTCRFSMPINN 261
           CLHMFHEECIRKWLK SH+CPTCRFSMP NN
Sbjct: 241 CLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]

BLAST of MELO3C018568.2.1 vs. NCBI nr
Match: XP_011659721.1 (PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus] >KGN43799.1 hypothetical protein Csa_7G067540 [Cucumis sativus])

HSP 1 Score: 351.7 bits (901), Expect = 2.2e-93
Identity = 184/268 (68.66%), Postives = 216/268 (80.60%), Query Frame = 0


Query: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60
           MAE N D CMS G +MGMSLRITDPDL   QPQSQ QT  NSP  VKQI+L  K++VKCQ
Sbjct: 1   MAEHNFDDCMSTGCFMGMSLRITDPDL-SLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQ 60

Query: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV 120
           HF A EEG TFA+TL+ EHI+S   FP  QLP+S+F+ G++TLKRLLFQ+FQ+FRGI+N+
Sbjct: 61  HFQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIINI 120

Query: 121 ELVVDEIIKHWIRKVEEDQENNSRV-FAEIYPLEIRIELLVCRMIPAI------IDQPQE 180
           +LV DEII+HW++K EED+ENNS V   EIYPLEI IELL+ RMI AI      IDQPQ 
Sbjct: 121 QLVADEIIEHWVKK-EEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETIDQPQ- 180

Query: 181 VMMVPTSDNAMESMLKRVENNEELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMPCLH 240
           V MVP S++AMESMLKRVE  EE++K+G+D SI+CVICLE+I K+ K S  VVLQMPCLH
Sbjct: 181 VTMVPASESAMESMLKRVE-KEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLH 240

Query: 241 MFHEECIRKWLKTSHFCPTCRFSMPINN 261
           MFHEECIR WLKTSH+CPTCRFSMPINN
Sbjct: 241 MFHEECIRTWLKTSHYCPTCRFSMPINN 264

[Close]

BLAST of MELO3C018568.2.1 vs. NCBI nr
Match: ADN34252.1 (hypothetical zinc finger protein [Cucumis melo subsp. melo])

HSP 1 Score: 327.4 bits (838), Expect = 4.4e-86
Identity = 178/271 (65.68%), Postives = 213/271 (78.60%), Query Frame = 0


Query: 1   MAEQNLDAC-MSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKC 60
           MAE+  + C   +G YMGMSLRITDP+ RH QP +QI  Q +SP LV+QI L FK+Q+KC
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRH-QPLNQID-QTSSPTLVEQICLKFKVQLKC 60

Query: 61  QHFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVN 120
           QHF   E G+  +TTL+ EHI SQ +F   QLPISIFK GDKTLKR+LF++F+M+  I+N
Sbjct: 61  QHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIIN 120

Query: 121 VELVVDEIIKHWIRKV--EEDQENNSRV-FAEIYPLEIRIELLVCRMIPAI------IDQ 180
           +EL+ +EIIKHW+RKV  EEDQENNS V F +IYPLEI I LLV +MI A+      IDQ
Sbjct: 121 IELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQ 180

Query: 181 PQEVMMVPTSDNAMESMLKRVENNEELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMP 240
           P   +MVPTSD+A+ESMLKRVE NEE+MK GDD SI+CV+CLE+I KEEK S   VLQMP
Sbjct: 181 P---LMVPTSDSAVESMLKRVE-NEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMP 240

Query: 241 CLHMFHEECIRKWLKTSHFCPTCRFSMPINN 261
           CLHMFHEECIRKWLKTSH+CPTCRFSMPI+N
Sbjct: 241 CLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]

BLAST of MELO3C018568.2.1 vs. TAIR10
Match: AT5G60820.1 (RING/U-box superfamily protein)

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-11
Identity = 29/80 (36.25%), Postives = 47/80 (58.75%), Query Frame = 0


Query: 178 PTSDNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEE 237
           P S + ++++     +NE++M+  DD++ C +C     KEE   G+ V ++PC H +H E
Sbjct: 343 PASKSFIKNLKVSPLSNEDVMENDDDAVCCAVC-----KEEMIVGKEVAELPCRHKYHSE 402

Query: 238 CIRKWLKTSHFCPTCRFSMP 258
           CI  WL   + CP CRF +P
Sbjct: 403 CIVPWLGIRNTCPVCRFELP 417

[Close]

BLAST of MELO3C018568.2.1 vs. TAIR10
Match: AT2G29840.1 (RING/U-box superfamily protein)

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-10
Identity = 39/132 (29.55%), Postives = 67/132 (50.76%), Query Frame = 0


Query: 126 EIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTSDNAME 185
           E++ HW+ + E D ++ +    E +  +        +++ A  ++     + P S  A+E
Sbjct: 174 EVLFHWLPRYEHDFDHQTE---EAFHPQFE------QVLQASFNETNTARLKPASKLAVE 233

Query: 186 SMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKT 245
           S L R    +    +G++ + C ICL     EE   GR ++ +PC H F +EC  KW +T
Sbjct: 234 S-LNRKTYKKASDVVGENEM-CSICL-----EEFDDGRSIVALPCGHEFDDECALKWFET 289

Query: 246 SHFCPTCRFSMP 258
           +H CP CRF +P
Sbjct: 294 NHDCPLCRFKLP 289

[Close]

BLAST of MELO3C018568.2.1 vs. TAIR10
Match: AT1G18770.1 (RING/U-box superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 8.2e-10
Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 207 CVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFSMP 258
           C+ICLE+  +     GR V+ +PC H F +EC+ KW +T+H CP CRF +P
Sbjct: 59  CIICLEEFSE-----GRRVVTLPCGHDFDDECVLKWFETNHSCPLCRFKLP 104

[Close]

BLAST of MELO3C018568.2.1 vs. TAIR10
Match: AT1G21960.1 (RING/U-box superfamily protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-09
Identity = 34/105 (32.38%), Postives = 54/105 (51.43%), Query Frame = 0


Query: 159 LVCRMI-PAIIDQPQEV-----MMVPTSDNAMESMLKRVENNEELMKLGDDSIDCVICLE 218
           + C++I P  ID   E      ++ P +   ++ + ++V N ++  K   D+  C ICLE
Sbjct: 106 MYCKVIVPPRIDSFDETTNNIELIRPANKLVVDRLARKVYNKKK--KSNSDASVCTICLE 165

Query: 219 KIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFSMP 258
           +  K     G +V+ +PC H F + CI KW    H CP CRF +P
Sbjct: 166 EFEK-----GEIVVTLPCGHEFDDGCIGKWFLKDHVCPLCRFELP 203

[Close]

BLAST of MELO3C018568.2.1 vs. TAIR10
Match: AT3G13228.1 (RING/U-box superfamily protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-09
Identity = 28/89 (31.46%), Postives = 48/89 (53.93%), Query Frame = 0


Query: 169 DQPQEVMMVPTSDNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQM 228
           D+     + P S   ++S+ +++ +     K+      C ICL     EE  +G +++ +
Sbjct: 242 DETTNFCLGPASKLVVKSLTRKIYD-----KINYTGERCTICL-----EEFNAGGILVAL 301

Query: 229 PCLHMFHEECIRKWLKTSHFCPTCRFSMP 258
           PC H F +EC  KW +T+HFCP CR+ +P
Sbjct: 302 PCGHDFDDECAVKWFETNHFCPLCRYELP 320

[Close]

BLAST of MELO3C018568.2.1 vs. Swiss-Prot
Match: sp|Q9LQX2|MPSR1_ARATH (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.6e-08
Identity = 26/54 (48.15%), Postives = 32/54 (59.26%), Query Frame = 0


Query: 206 DCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFSMPIN 260
           +CVICL     EE +S   V +MPC H FH  CI KWL     CP CR+ MP++
Sbjct: 112 ECVICL-----EEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]

BLAST of MELO3C018568.2.1 vs. Swiss-Prot
Match: sp|Q8LPN7|RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.3e-08
Identity = 28/92 (30.43%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 169 DQPQEVMMVPTSDNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQM 228
           + P      P S +A+++ L  V+  ++++K   +   C +C+     +E   G  V QM
Sbjct: 181 NDPNRYGTPPASKSAIDA-LPTVKVTKDMLK--SEMNQCAVCM-----DEFEDGSDVKQM 240

Query: 229 PCLHMFHEECIRKWLKTSHFCPTCRFSMPINN 261
           PC H+FH++C+  WL+  + CP CRF +P ++
Sbjct: 241 PCKHVFHQDCLLPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of MELO3C018568.2.1 vs. Swiss-Prot
Match: sp|P87139|YDM9_SCHPO (Uncharacterized RING finger protein C57A7.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC57A7.09 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.1e-07
Identity = 31/81 (38.27%), Postives = 42/81 (51.85%), Query Frame = 0


Query: 185 ESMLKRVENNEELMKLGDDS-------IDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEE 244
           E  ++    N EL+ L D+S       ++CVICLE   K +K     V+ +PC H FH  
Sbjct: 292 EEEIENSTQNGELVPLMDESTRRATFGVECVICLESFTKGDK-----VVALPCKHEFHRP 351

Query: 245 CIRKWL-KTSHFCPTCRFSMP 258
           CI KW+    H CPTC   +P
Sbjct: 352 CIAKWIVDYRHACPTCNTEVP 367

[Close]

BLAST of MELO3C018568.2.1 vs. Swiss-Prot
Match: sp|Q7T0Q3|R126A_XENLA (E3 ubiquitin-protein ligase RNF126-A OS=Xenopus laevis OX=8355 GN=rnf126-a PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.8e-07
Identity = 29/83 (34.94%), Postives = 42/83 (50.60%), Query Frame = 0


Query: 178 PTSDNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEE 237
           P +DN     L  ++  EE +  G   ++C +C     KE+   G  V Q+PC H+FH +
Sbjct: 202 PPADNEKIQALPTIQITEEHVGSG---LECPVC-----KEDYTVGECVRQLPCNHLFHND 261

Query: 238 CIRKWLKTSHFCPTCRFSMPINN 261
           CI  WL+    CP CR S+   N
Sbjct: 262 CIIPWLEQHDTCPVCRKSLSGQN 276

[Close]

BLAST of MELO3C018568.2.1 vs. Swiss-Prot
Match: sp|Q940T5|RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.8e-07
Identity = 30/80 (37.50%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 178 PTSDNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEE 237
           P S +A+ES L RVE ++    +G ++ +C +C E    E +       +MPC H+FH++
Sbjct: 174 PASKSAIES-LPRVEISD--CHIGSEA-NCAVCTEIFETETE-----AREMPCKHLFHDD 233

Query: 238 CIRKWLKTSHFCPTCRFSMP 258
           CI  WL   + CP CRF +P
Sbjct: 234 CIVPWLSIRNSCPVCRFELP 244

[Close]

BLAST of MELO3C018568.2.1 vs. TrEMBL
Match: tr|E5GCQ4|E5GCQ4_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 8.6e-147
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60
           MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ
Sbjct: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60

Query: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV 120
           HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV
Sbjct: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV 120

Query: 121 ELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTS 180
           ELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTS
Sbjct: 121 ELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTS 180

Query: 181 DNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIR 240
           DNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIR
Sbjct: 181 DNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIR 240

Query: 241 KWLKTSHFCPTCRFSMPINN 261
           KWLKTSHFCPTCRFSMPINN
Sbjct: 241 KWLKTSHFCPTCRFSMPINN 260

[Close]

BLAST of MELO3C018568.2.1 vs. TrEMBL
Match: tr|A0A0A0K2A1|A0A0A0K2A1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 8.4e-102
Identity = 198/267 (74.16%), Postives = 219/267 (82.02%), Query Frame = 0


Query: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60
           MAEQN D C S GYYMGMSLRITDP          IQT+ NSP  VKQIDLNFK++VKCQ
Sbjct: 1   MAEQNFDDCTS-GYYMGMSLRITDP----------IQTRSNSPTSVKQIDLNFKVEVKCQ 60

Query: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV 120
           HF AGEE +TFATT LSEHII+   FPALQLP+SIFK GDKTLKRLLFQKFQMFR I+N+
Sbjct: 61  HFQAGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINI 120

Query: 121 ELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAIIDQPQE------V 180
           ELV D+IIKHW++KVE+D+ENNS VF EIYPLEI IE+LV +MI A +DQPQE      V
Sbjct: 121 ELVTDQIIKHWVKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDA-VDQPQETIDQPQV 180

Query: 181 MMVPTSDNAMESMLKRVENNEELMKLGD-DSIDCVICLEKIGKEEKRSGRVVLQMPCLHM 240
            MVPTSD+AM+SMLKRVE NEE+MK+GD  SI CVICLEKI KEEK S  VVLQMPCLHM
Sbjct: 181 RMVPTSDSAMKSMLKRVE-NEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHM 240

Query: 241 FHEECIRKWLKTSHFCPTCRFSMPINN 261
           FHEECIRKWLKTSH+CPTCRFSM INN
Sbjct: 241 FHEECIRKWLKTSHYCPTCRFSMTINN 254

[Close]

BLAST of MELO3C018568.2.1 vs. TrEMBL
Match: tr|A0A0A0K7L0|A0A0A0K7L0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.2e-95
Identity = 193/271 (71.22%), Postives = 223/271 (82.29%), Query Frame = 0


Query: 1   MAEQNLDAC-MSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKC 60
           MAEQ    C   +G Y+GMSLRITDPDLRH QPQSQI+T PNSP LVKQIDLNFK++VKC
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRH-QPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60

Query: 61  QH-FGAGEEG-STFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGI 120
           QH F AGE G STFAT LLSEHI S    P LQLP+SIFK GDKTLKRLLF++FQ++R I
Sbjct: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120

Query: 121 VNVELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAI-------IDQ 180
           +N+ELVVDEIIKHW++KV+E + + S+VF EIYPLEI IELLV +MI AI       +DQ
Sbjct: 121 INIELVVDEIIKHWVKKVDE-ENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQ 180

Query: 181 PQEVMMVPTSDNAMESMLKRVENNEELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMP 240
           PQ VMMVPTS++AMESMLK+VE NEE++K GD+ SI+CVICLE+I KE+K S  VVLQMP
Sbjct: 181 PQ-VMMVPTSESAMESMLKKVE-NEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMP 240

Query: 241 CLHMFHEECIRKWLKTSHFCPTCRFSMPINN 261
           CLHMFHEECIRKWLK SH+CPTCRFSMP NN
Sbjct: 241 CLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]

BLAST of MELO3C018568.2.1 vs. TrEMBL
Match: tr|A0A0A0K493|A0A0A0K493_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067540 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 1.4e-93
Identity = 184/268 (68.66%), Postives = 216/268 (80.60%), Query Frame = 0


Query: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60
           MAE N D CMS G +MGMSLRITDPDL   QPQSQ QT  NSP  VKQI+L  K++VKCQ
Sbjct: 1   MAEHNFDDCMSTGCFMGMSLRITDPDL-SLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQ 60

Query: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV 120
           HF A EEG TFA+TL+ EHI+S   FP  QLP+S+F+ G++TLKRLLFQ+FQ+FRGI+N+
Sbjct: 61  HFQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIINI 120

Query: 121 ELVVDEIIKHWIRKVEEDQENNSRV-FAEIYPLEIRIELLVCRMIPAI------IDQPQE 180
           +LV DEII+HW++K EED+ENNS V   EIYPLEI IELL+ RMI AI      IDQPQ 
Sbjct: 121 QLVADEIIEHWVKK-EEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETIDQPQ- 180

Query: 181 VMMVPTSDNAMESMLKRVENNEELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMPCLH 240
           V MVP S++AMESMLKRVE  EE++K+G+D SI+CVICLE+I K+ K S  VVLQMPCLH
Sbjct: 181 VTMVPASESAMESMLKRVE-KEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLH 240

Query: 241 MFHEECIRKWLKTSHFCPTCRFSMPINN 261
           MFHEECIR WLKTSH+CPTCRFSMPINN
Sbjct: 241 MFHEECIRTWLKTSHYCPTCRFSMPINN 264

[Close]

BLAST of MELO3C018568.2.1 vs. TrEMBL
Match: tr|E5GCQ3|E5GCQ3_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 2.9e-86
Identity = 178/271 (65.68%), Postives = 213/271 (78.60%), Query Frame = 0


Query: 1   MAEQNLDAC-MSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKC 60
           MAE+  + C   +G YMGMSLRITDP+ RH QP +QI  Q +SP LV+QI L FK+Q+KC
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRH-QPLNQID-QTSSPTLVEQICLKFKVQLKC 60

Query: 61  QHFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVN 120
           QHF   E G+  +TTL+ EHI SQ +F   QLPISIFK GDKTLKR+LF++F+M+  I+N
Sbjct: 61  QHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIIN 120

Query: 121 VELVVDEIIKHWIRKV--EEDQENNSRV-FAEIYPLEIRIELLVCRMIPAI------IDQ 180
           +EL+ +EIIKHW+RKV  EEDQENNS V F +IYPLEI I LLV +MI A+      IDQ
Sbjct: 121 IELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQ 180

Query: 181 PQEVMMVPTSDNAMESMLKRVENNEELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMP 240
           P   +MVPTSD+A+ESMLKRVE NEE+MK GDD SI+CV+CLE+I KEEK S   VLQMP
Sbjct: 181 P---LMVPTSDSAVESMLKRVE-NEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMP 240

Query: 241 CLHMFHEECIRKWLKTSHFCPTCRFSMPINN 261
           CLHMFHEECIRKWLKTSH+CPTCRFSMPI+N
Sbjct: 241 CLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

The following BLAST results are available for this feature:

BLAST of MELO3C018568.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34253.1	1.3e-146	100.00	hypothetical zinc finger protein [Cucumis melo subsp. melo]	[more]
KGN43800.1	1.3e-101	74.16	hypothetical protein Csa_7G067550 [Cucumis sativus]	[more]
KGN43801.1	1.8e-95	71.22	hypothetical protein Csa_7G067560 [Cucumis sativus]	[more]
XP_011659721.1	2.2e-93	68.66	PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus] >KGN43799.1 ...	[more]
ADN34252.1	4.4e-86	65.68	hypothetical zinc finger protein [Cucumis melo subsp. melo]	[more]

BLAST of MELO3C018568.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60820.1	1.1e-11	36.25	RING/U-box superfamily protein	[more]
AT2G29840.1	1.6e-10	29.55	RING/U-box superfamily protein	[more]
AT1G18770.1	8.2e-10	47.06	RING/U-box superfamily protein	[more]
AT1G21960.1	1.8e-09	32.38	RING/U-box superfamily protein	[more]
AT3G13228.1	1.8e-09	31.46	RING/U-box superfamily protein	[more]

BLAST of MELO3C018568.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LQX2\|MPSR1_ARATH	5.6e-08	48.15	E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ...	[more]
sp\|Q8LPN7\|RNG1L_ARATH	7.3e-08	30.43	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
sp\|P87139\|YDM9_SCHPO	2.1e-07	38.27	Uncharacterized RING finger protein C57A7.09 OS=Schizosaccharomyces pombe (strai...	[more]
sp\|Q7T0Q3\|R126A_XENLA	2.8e-07	34.94	E3 ubiquitin-protein ligase RNF126-A OS=Xenopus laevis OX=8355 GN=rnf126-a PE=2 ...	[more]
sp\|Q940T5\|RDUF2_ARATH	2.8e-07	37.50	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]

BLAST of MELO3C018568.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GCQ4\|E5GCQ4_CUCME	8.6e-147	100.00	Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A0A0K2A1\|A0A0A0K2A1_CUCSA	8.4e-102	74.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 PE=4 SV=1	[more]
tr\|A0A0A0K7L0\|A0A0A0K7L0_CUCSA	1.2e-95	71.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 PE=4 SV=1	[more]
tr\|A0A0A0K493\|A0A0A0K493_CUCSA	1.4e-93	68.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067540 PE=4 SV=1	[more]
tr\|E5GCQ3\|E5GCQ3_CUCME	2.9e-86	65.68	Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING
IPR011016	Znf_RING-CH

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C018568.2	MELO3C018568.2	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C018568.2.1.CDS.1	MELO3C018568.2.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C018568.2.1.exon.1	MELO3C018568.2.1.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C018568.2.1	MELO3C018568.2.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 206..253 e-value: 0.0081 score: 8.0
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 207..252 e-value: 4.4E-8 score: 42.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 206..253 e-value: 1.6E-12 score: 47.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 207..253 score: 12.755
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 168..259 e-value: 1.1E-17 score: 65.4
None	No IPR available	PANTHER	PTHR14155:SF439	GB\|AAD18119.1	coord: 145..254
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 145..254
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 206..257