MELO3C018567.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C018567.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	E3 ubiquitin-protein ligase
Location	chr01 : 1144240 .. 1145037 (+)
Sequence length	798

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAAGAAATCTTTAATATTTGCAGGTATGGCTCTGGTTCCTACATGGGTATGTCACTGAGAATTACCGATCCCAACCCAAGGCATCAACCACTTAACCAAATTGATCAAACTAGCTCGCCAACACTTGTCGAACAAATCTGCCTGAAATTCAAAGTTCAACTCAAATGCCAACACTTTCAAGTGTGGGAAGGAGGCAATGGACATTCAACAACTTTGGTTCGTGAACACATAAGATCACAACATTCGTTTGCAACTTTCCAGCTTCCTATTTCCATCTTCAAGCATGGTGACAAAACTTTGAAGCGAATACTTTTTCGGGAGTTTAAGATGTATGGAGACATCATCAACATCGAACTGCTGGCTAACGAAATAATAAAACATTGGGTTAGAAAAGTTGAAGAAGAAGAAGATCAAGAGAATAACTCTAATGTATTATTTAAGAAGATTTATCCTCTTGAGATTATGATAAGGTTGTTGGTTTCTAAAATGATTCGTGCAGTTCAACCACGGTTAGCAATGATAGATCAACCCCTTATGGTTCCAACAAGCGATAGTGCTGTGGAGAGTATGCTAAAGAGAGTGGAGAACGAGGAAATAATGAAATCAGGTGACGATGAAAGCATTAACTGTGTTGTTTGTTTGGAAGAAATTAGTAAAGAAGAGAAAGGAAGTGAGACAACGGTGTTACAGATGCCATGTTTGCATATGTTTCACGAAGAATGTATACGGAAGTGGCTGAAAACAAGTCATTATTGTCCAACTTGTAGATTTTCAATGCCTATAGACAATTGA

mRNA sequence

ATGGCTGAAGAAATCTTTAATATTTGCAGGTATGGCTCTGGTTCCTACATGGGTATGTCACTGAGAATTACCGATCCCAACCCAAGGCATCAACCACTTAACCAAATTGATCAAACTAGCTCGCCAACACTTGTCGAACAAATCTGCCTGAAATTCAAAGTTCAACTCAAATGCCAACACTTTCAAGTGTGGGAAGGAGGCAATGGACATTCAACAACTTTGGTTCGTGAACACATAAGATCACAACATTCGTTTGCAACTTTCCAGCTTCCTATTTCCATCTTCAAGCATGGTGACAAAACTTTGAAGCGAATACTTTTTCGGGAGTTTAAGATGTATGGAGACATCATCAACATCGAACTGCTGGCTAACGAAATAATAAAACATTGGGTTAGAAAAGTTGAAGAAGAAGAAGATCAAGAGAATAACTCTAATGTATTATTTAAGAAGATTTATCCTCTTGAGATTATGATAAGGTTGTTGGTTTCTAAAATGATTCGTGCAGTTCAACCACGGTTAGCAATGATAGATCAACCCCTTATGGTTCCAACAAGCGATAGTGCTGTGGAGAGTATGCTAAAGAGAGTGGAGAACGAGGAAATAATGAAATCAGGTGACGATGAAAGCATTAACTGTGTTGTTTGTTTGGAAGAAATTAGTAAAGAAGAGAAAGGAAGTGAGACAACGGTGTTACAGATGCCATGTTTGCATATGTTTCACGAAGAATGTATACGGAAGTGGCTGAAAACAAGTCATTATTGTCCAACTTGTAGATTTTCAATGCCTATAGACAATTGA

Coding sequence (CDS)

ATGGCTGAAGAAATCTTTAATATTTGCAGGTATGGCTCTGGTTCCTACATGGGTATGTCACTGAGAATTACCGATCCCAACCCAAGGCATCAACCACTTAACCAAATTGATCAAACTAGCTCGCCAACACTTGTCGAACAAATCTGCCTGAAATTCAAAGTTCAACTCAAATGCCAACACTTTCAAGTGTGGGAAGGAGGCAATGGACATTCAACAACTTTGGTTCGTGAACACATAAGATCACAACATTCGTTTGCAACTTTCCAGCTTCCTATTTCCATCTTCAAGCATGGTGACAAAACTTTGAAGCGAATACTTTTTCGGGAGTTTAAGATGTATGGAGACATCATCAACATCGAACTGCTGGCTAACGAAATAATAAAACATTGGGTTAGAAAAGTTGAAGAAGAAGAAGATCAAGAGAATAACTCTAATGTATTATTTAAGAAGATTTATCCTCTTGAGATTATGATAAGGTTGTTGGTTTCTAAAATGATTCGTGCAGTTCAACCACGGTTAGCAATGATAGATCAACCCCTTATGGTTCCAACAAGCGATAGTGCTGTGGAGAGTATGCTAAAGAGAGTGGAGAACGAGGAAATAATGAAATCAGGTGACGATGAAAGCATTAACTGTGTTGTTTGTTTGGAAGAAATTAGTAAAGAAGAGAAAGGAAGTGAGACAACGGTGTTACAGATGCCATGTTTGCATATGTTTCACGAAGAATGTATACGGAAGTGGCTGAAAACAAGTCATTATTGTCCAACTTGTAGATTTTCAATGCCTATAGACAATTGA

Protein sequence

MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQTSSPTLVEQICLKFKVQLKCQHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINIELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQPLMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMPIDN

Homology

[Close]

BLAST of MELO3C018567.2.1 vs. NCBI nr
Match: ADN34252.1 (hypothetical zinc finger protein [Cucumis melo subsp. melo])

HSP 1 Score: 540.4 bits (1391), Expect = 3.4e-150
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQTSSPTLVEQICLKFKVQLKCQH 60
           MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQTSSPTLVEQICLKFKVQLKCQH
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQTSSPTLVEQICLKFKVQLKCQH 60

Query: 61  FQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINIE 120
           FQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINIE
Sbjct: 61  FQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINIE 120

Query: 121 LLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQPL 180
           LLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQPL
Sbjct: 121 LLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQPL 180

Query: 181 MVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFH 240
           MVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFH
Sbjct: 181 MVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFH 240

Query: 241 EECIRKWLKTSHYCPTCRFSMPIDN 266
           EECIRKWLKTSHYCPTCRFSMPIDN
Sbjct: 241 EECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]

BLAST of MELO3C018567.2.1 vs. NCBI nr
Match: KGN43801.1 (hypothetical protein Csa_7G067560 [Cucumis sativus])

HSP 1 Score: 365.2 bits (936), Expect = 1.9e-97
Identity = 187/271 (69.00%), Postives = 224/271 (82.66%), Query Frame = 0


Query: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQI-DQTSSPTLVEQICLKFKVQLKCQ 60
           MAE+IF  CRYGSGSY+GMSLRITDP+ RHQP +QI    +SPTLV+QI L FKV++KCQ
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60

Query: 61  H-FQVWEGGNG-HSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDII 120
           H FQ  EGGN   +T L+ EHI S H   T QLP+SIFKHGDKTLKR+LFREF++Y  II
Sbjct: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120

Query: 121 NIELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAV-QPRLAMI 180
           NIEL+ +EIIKHWV+KV    D+EN+++ +F++IYPLEI I LLV +MI A+ QP   M+
Sbjct: 121 NIELVVDEIIKHWVKKV----DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMM 180

Query: 181 DQP--LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMP 240
           DQP  +MVPTS+SA+ESMLK+VENEEI+K GD++SINCV+CLEEISKE+KGSE  VLQMP
Sbjct: 181 DQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMP 240

Query: 241 CLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 266
           CLHMFHEECIRKWLK SHYCPTCRFSMP +N
Sbjct: 241 CLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]

BLAST of MELO3C018567.2.1 vs. NCBI nr
Match: XP_011659721.1 (PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus] >KGN43799.1 hypothetical protein Csa_7G067540 [Cucumis sativus])

HSP 1 Score: 331.3 bits (848), Expect = 3.1e-87
Identity = 171/269 (63.57%), Postives = 215/269 (79.93%), Query Frame = 0


Query: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQT--SSPTLVEQICLKFKVQLKC 60
           MAE  F+ C   +G +MGMSLRITDP+   QP +Q +QT  +SPT V+QI LK KV++KC
Sbjct: 1   MAEHNFDDC-MSTGCFMGMSLRITDPDLSLQPQSQ-NQTPHNSPTFVKQINLKLKVEVKC 60

Query: 61  QHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIIN 120
           QHFQ  E G+  ++TL+ EHI S H F TFQLP+S+F+HG++TLKR+LF++F+++  IIN
Sbjct: 61  QHFQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIIN 120

Query: 121 IELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQ 180
           I+L+A+EII+HWV+K   EED+ENNS VL ++IYPLEI I LL+ +MI A+      IDQ
Sbjct: 121 IQLVADEIIEHWVKK---EEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETIDQ 180

Query: 181 P--LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCL 240
           P   MVP S+SA+ESMLKRVE EEI+K G+D+SINCV+CLEEISK+ KGSE  VLQMPCL
Sbjct: 181 PQVTMVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCL 240

Query: 241 HMFHEECIRKWLKTSHYCPTCRFSMPIDN 266
           HMFHEECIR WLKTSHYCPTCRFSMPI+N
Sbjct: 241 HMFHEECIRTWLKTSHYCPTCRFSMPINN 264

[Close]

BLAST of MELO3C018567.2.1 vs. NCBI nr
Match: ADN34253.1 (hypothetical zinc finger protein [Cucumis melo subsp. melo])

HSP 1 Score: 326.2 bits (835), Expect = 1.0e-85
Identity = 178/271 (65.68%), Postives = 213/271 (78.60%), Query Frame = 0


Query: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRH-QPLNQID-QTSSPTLVEQICLKFKVQLKC 60
           MAE+  + C   +G YMGMSLRITDP+ RH QP +QI  Q +SP LV+QI L FK+Q+KC
Sbjct: 1   MAEQNLDAC-MSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKC 60

Query: 61  QHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIIN 120
           QHF   E G+  +TTL+ EHI SQ +F   QLPISIFK GDKTLKR+LF++F+M+  I+N
Sbjct: 61  QHFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVN 120

Query: 121 IELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQ 180
           +EL+ +EIIKHW+RKV  EEDQENNS V F +IYPLEI I LLV +MI A+      IDQ
Sbjct: 121 VELVVDEIIKHWIRKV--EEDQENNSRV-FAEIYPLEIRIELLVCRMIPAI------IDQ 180

Query: 181 P---LMVPTSDSAVESMLKRVE-NEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMP 240
           P   +MVPTSD+A+ESMLKRVE NEE+MK GDD SI+CV+CLE+I KEEK S   VLQMP
Sbjct: 181 PQEVMMVPTSDNAMESMLKRVENNEELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMP 240

Query: 241 CLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 266
           CLHMFHEECIRKWLKTSH+CPTCRFSMPI+N
Sbjct: 241 CLHMFHEECIRKWLKTSHFCPTCRFSMPINN 260

[Close]

BLAST of MELO3C018567.2.1 vs. NCBI nr
Match: KGN43800.1 (hypothetical protein Csa_7G067550 [Cucumis sativus])

HSP 1 Score: 322.0 bits (824), Expect = 1.9e-84
Identity = 172/267 (64.42%), Postives = 206/267 (77.15%), Query Frame = 0


Query: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQTSSPTLVEQICLKFKVQLKCQH 60
           MAE+ F+ C   SG YMGMSLRITDP           +++SPT V+QI L FKV++KCQH
Sbjct: 1   MAEQNFDDCT--SGYYMGMSLRITDPIQ--------TRSNSPTSVKQIDLNFKVEVKCQH 60

Query: 61  FQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINIE 120
           FQ  E     +TT + EHI +   F   QLP+SIFKHGDKTLKR+LF++F+M+  IINIE
Sbjct: 61  FQAGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIE 120

Query: 121 LLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQP- 180
           L+ ++IIKHWV+KV  E+D+ENNS V F++IYPLEI I +LV +MI AV      IDQP 
Sbjct: 121 LVTDQIIKHWVKKV--EDDKENNSGV-FEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQ 180

Query: 181 -LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHM 240
             MVPTSDSA++SMLKRVENEEIMK GD +SI+CV+CLE+ISKEEKGSE  VLQMPCLHM
Sbjct: 181 VRMVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHM 240

Query: 241 FHEECIRKWLKTSHYCPTCRFSMPIDN 266
           FHEECIRKWLKTSHYCPTCRFSM I+N
Sbjct: 241 FHEECIRKWLKTSHYCPTCRFSMTINN 254

[Close]

BLAST of MELO3C018567.2.1 vs. TAIR10
Match: AT3G19950.1 (RING/U-box superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-11
Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = 0


Query: 183 PTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFHEE 242
           P S SA++++      ++++KS   E   C VC++E    E GS+  V QMPC H+FH++
Sbjct: 190 PASKSAIDALPTVKVTKDMLKS---EMNQCAVCMDEF---EDGSD--VKQMPCKHVFHQD 249

Query: 243 CIRKWLKTSHYCPTCRFSMPIDN 266
           C+  WL+  + CP CRF +P D+
Sbjct: 250 CLLPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of MELO3C018567.2.1 vs. TAIR10
Match: AT3G58720.2 (RING/U-box superfamily protein)

HSP 1 Score: 64.7 bits (156), Expect = 9.8e-11
Identity = 29/56 (51.79%), Postives = 35/56 (62.50%), Query Frame = 0


Query: 204 SGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFHEECIRKWLKTSHYCPTCRF 260
           SG+++   C VCLE+   +E     TV+  PC HMFHEECI  WLKT   CP CRF
Sbjct: 164 SGEEDDKRCSVCLEDFEPKE-----TVMLTPCKHMFHEECIVPWLKTKGQCPVCRF 214

[Close]

BLAST of MELO3C018567.2.1 vs. TAIR10
Match: AT1G26800.1 (RING/U-box superfamily protein)

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-10
Identity = 28/53 (52.83%), Postives = 32/53 (60.38%), Query Frame = 0


Query: 212 CVVCLEEISKEEKGSETTVLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMPID 265
           CV+CLEE   EE     TV +MPC H FH  CI KWL     CP CR+ MP+D
Sbjct: 113 CVICLEEWKSEE-----TVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]

BLAST of MELO3C018567.2.1 vs. TAIR10
Match: AT5G60820.1 (RING/U-box superfamily protein)

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-10
Identity = 32/85 (37.65%), Postives = 51/85 (60.00%), Query Frame = 0


Query: 183 PTSDSAVESM-LKRVENEEIMKSGDDESINCVVCLEE--ISKEEKGSETTVLQMPCLHMF 242
           P S S ++++ +  + NE++M++ DD+++ C VC EE  + KE       V ++PC H +
Sbjct: 343 PASKSFIKNLKVSPLSNEDVMEN-DDDAVCCAVCKEEMIVGKE-------VAELPCRHKY 402

Query: 243 HEECIRKWLKTSHYCPTCRFSMPID 265
           H ECI  WL   + CP CRF +P D
Sbjct: 403 HSECIVPWLGIRNTCPVCRFELPSD 419

[Close]

BLAST of MELO3C018567.2.1 vs. TAIR10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 62.0 bits (149), Expect = 6.4e-10
Identity = 34/80 (42.50%), Postives = 42/80 (52.50%), Query Frame = 0


Query: 183 PTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFHEE 242
           P S SA+ES L RV   EI         NC VC E        +ET   +MPC H+FH++
Sbjct: 174 PASKSAIES-LPRV---EISDCHIGSEANCAVCTEIFE-----TETEAREMPCKHLFHDD 233

Query: 243 CIRKWLKTSHYCPTCRFSMP 263
           CI  WL   + CP CRF +P
Sbjct: 234 CIVPWLSIRNSCPVCRFELP 244

[Close]

BLAST of MELO3C018567.2.1 vs. Swiss-Prot
Match: sp|Q8LPN7|RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.7e-10
Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = 0


Query: 183 PTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFHEE 242
           P S SA++++      ++++KS   E   C VC++E    E GS+  V QMPC H+FH++
Sbjct: 190 PASKSAIDALPTVKVTKDMLKS---EMNQCAVCMDEF---EDGSD--VKQMPCKHVFHQD 249

Query: 243 CIRKWLKTSHYCPTCRFSMPIDN 266
           C+  WL+  + CP CRF +P D+
Sbjct: 250 CLLPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of MELO3C018567.2.1 vs. Swiss-Prot
Match: sp|Q9LQX2|MPSR1_ARATH (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.9e-09
Identity = 28/53 (52.83%), Postives = 32/53 (60.38%), Query Frame = 0


Query: 212 CVVCLEEISKEEKGSETTVLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMPID 265
           CV+CLEE   EE     TV +MPC H FH  CI KWL     CP CR+ MP+D
Sbjct: 113 CVICLEEWKSEE-----TVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]

BLAST of MELO3C018567.2.1 vs. Swiss-Prot
Match: sp|Q3T0W3|RN181_BOVIN (E3 ubiquitin-protein ligase RNF181 OS=Bos taurus OX=9913 GN=RNF181 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.9e-09
Identity = 32/89 (35.96%), Postives = 46/89 (51.69%), Query Frame = 0


Query: 177 DQPLMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCL 236
           D  L  P + +AVE++ + V        G    + C VCL E  +EE     T ++MPC 
Sbjct: 47  DHHLPPPAAKTAVENLPRTVIR------GSQAELKCPVCLLEFEEEE-----TAIEMPCH 106

Query: 237 HMFHEECIRKWLKTSHYCPTCRFSMPIDN 266
           H+FH  CI  WL  ++ CP CR  +P D+
Sbjct: 107 HLFHSNCILPWLSKTNSCPLCRHELPTDD 124

[Close]

BLAST of MELO3C018567.2.1 vs. Swiss-Prot
Match: sp|Q940T5|RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08
Identity = 34/80 (42.50%), Postives = 42/80 (52.50%), Query Frame = 0


Query: 183 PTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFHEE 242
           P S SA+ES L RV   EI         NC VC E        +ET   +MPC H+FH++
Sbjct: 174 PASKSAIES-LPRV---EISDCHIGSEANCAVCTEIFE-----TETEAREMPCKHLFHDD 233

Query: 243 CIRKWLKTSHYCPTCRFSMP 263
           CI  WL   + CP CRF +P
Sbjct: 234 CIVPWLSIRNSCPVCRFELP 244

[Close]

BLAST of MELO3C018567.2.1 vs. Swiss-Prot
Match: sp|Q6AXU4|RN181_RAT (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08
Identity = 32/83 (38.55%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 183 PTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFHEE 242
           P + + VES+ + V     ++S   E + C VCL E  +EE     TV++MPC H+FH  
Sbjct: 65  PAAKAVVESLPRTV-----IRSSKAE-LKCPVCLLEFEEEE-----TVIEMPCHHLFHSN 124

Query: 243 CIRKWLKTSHYCPTCRFSMPIDN 266
           CI  WL  ++ CP CR  +P D+
Sbjct: 125 CILPWLSKTNSCPLCRHELPTDD 136

[Close]

BLAST of MELO3C018567.2.1 vs. TrEMBL
Match: tr|E5GCQ3|E5GCQ3_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 2.2e-150
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQTSSPTLVEQICLKFKVQLKCQH 60
           MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQTSSPTLVEQICLKFKVQLKCQH
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQTSSPTLVEQICLKFKVQLKCQH 60

Query: 61  FQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINIE 120
           FQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINIE
Sbjct: 61  FQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINIE 120

Query: 121 LLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQPL 180
           LLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQPL
Sbjct: 121 LLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQPL 180

Query: 181 MVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFH 240
           MVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFH
Sbjct: 181 MVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFH 240

Query: 241 EECIRKWLKTSHYCPTCRFSMPIDN 266
           EECIRKWLKTSHYCPTCRFSMPIDN
Sbjct: 241 EECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]

BLAST of MELO3C018567.2.1 vs. TrEMBL
Match: tr|A0A0A0K7L0|A0A0A0K7L0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.3e-97
Identity = 187/271 (69.00%), Postives = 224/271 (82.66%), Query Frame = 0


Query: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQI-DQTSSPTLVEQICLKFKVQLKCQ 60
           MAE+IF  CRYGSGSY+GMSLRITDP+ RHQP +QI    +SPTLV+QI L FKV++KCQ
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60

Query: 61  H-FQVWEGGNG-HSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDII 120
           H FQ  EGGN   +T L+ EHI S H   T QLP+SIFKHGDKTLKR+LFREF++Y  II
Sbjct: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120

Query: 121 NIELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAV-QPRLAMI 180
           NIEL+ +EIIKHWV+KV    D+EN+++ +F++IYPLEI I LLV +MI A+ QP   M+
Sbjct: 121 NIELVVDEIIKHWVKKV----DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMM 180

Query: 181 DQP--LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMP 240
           DQP  +MVPTS+SA+ESMLK+VENEEI+K GD++SINCV+CLEEISKE+KGSE  VLQMP
Sbjct: 181 DQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMP 240

Query: 241 CLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 266
           CLHMFHEECIRKWLK SHYCPTCRFSMP +N
Sbjct: 241 CLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]

BLAST of MELO3C018567.2.1 vs. TrEMBL
Match: tr|A0A0A0K493|A0A0A0K493_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067540 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.1e-87
Identity = 171/269 (63.57%), Postives = 215/269 (79.93%), Query Frame = 0


Query: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQT--SSPTLVEQICLKFKVQLKC 60
           MAE  F+ C   +G +MGMSLRITDP+   QP +Q +QT  +SPT V+QI LK KV++KC
Sbjct: 1   MAEHNFDDC-MSTGCFMGMSLRITDPDLSLQPQSQ-NQTPHNSPTFVKQINLKLKVEVKC 60

Query: 61  QHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIIN 120
           QHFQ  E G+  ++TL+ EHI S H F TFQLP+S+F+HG++TLKR+LF++F+++  IIN
Sbjct: 61  QHFQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIIN 120

Query: 121 IELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQ 180
           I+L+A+EII+HWV+K   EED+ENNS VL ++IYPLEI I LL+ +MI A+      IDQ
Sbjct: 121 IQLVADEIIEHWVKK---EEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETIDQ 180

Query: 181 P--LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCL 240
           P   MVP S+SA+ESMLKRVE EEI+K G+D+SINCV+CLEEISK+ KGSE  VLQMPCL
Sbjct: 181 PQVTMVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCL 240

Query: 241 HMFHEECIRKWLKTSHYCPTCRFSMPIDN 266
           HMFHEECIR WLKTSHYCPTCRFSMPI+N
Sbjct: 241 HMFHEECIRTWLKTSHYCPTCRFSMPINN 264

[Close]

BLAST of MELO3C018567.2.1 vs. TrEMBL
Match: tr|E5GCQ4|E5GCQ4_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 6.6e-86
Identity = 178/271 (65.68%), Postives = 213/271 (78.60%), Query Frame = 0


Query: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRH-QPLNQID-QTSSPTLVEQICLKFKVQLKC 60
           MAE+  + C   +G YMGMSLRITDP+ RH QP +QI  Q +SP LV+QI L FK+Q+KC
Sbjct: 1   MAEQNLDAC-MSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKC 60

Query: 61  QHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIIN 120
           QHF   E G+  +TTL+ EHI SQ +F   QLPISIFK GDKTLKR+LF++F+M+  I+N
Sbjct: 61  QHFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVN 120

Query: 121 IELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQ 180
           +EL+ +EIIKHW+RKV  EEDQENNS V F +IYPLEI I LLV +MI A+      IDQ
Sbjct: 121 VELVVDEIIKHWIRKV--EEDQENNSRV-FAEIYPLEIRIELLVCRMIPAI------IDQ 180

Query: 181 P---LMVPTSDSAVESMLKRVE-NEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMP 240
           P   +MVPTSD+A+ESMLKRVE NEE+MK GDD SI+CV+CLE+I KEEK S   VLQMP
Sbjct: 181 PQEVMMVPTSDNAMESMLKRVENNEELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMP 240

Query: 241 CLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 266
           CLHMFHEECIRKWLKTSH+CPTCRFSMPI+N
Sbjct: 241 CLHMFHEECIRKWLKTSHFCPTCRFSMPINN 260

[Close]

BLAST of MELO3C018567.2.1 vs. TrEMBL
Match: tr|A0A0A0K2A1|A0A0A0K2A1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.2e-84
Identity = 172/267 (64.42%), Postives = 206/267 (77.15%), Query Frame = 0


Query: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQTSSPTLVEQICLKFKVQLKCQH 60
           MAE+ F+ C   SG YMGMSLRITDP           +++SPT V+QI L FKV++KCQH
Sbjct: 1   MAEQNFDDCT--SGYYMGMSLRITDPIQ--------TRSNSPTSVKQIDLNFKVEVKCQH 60

Query: 61  FQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINIE 120
           FQ  E     +TT + EHI +   F   QLP+SIFKHGDKTLKR+LF++F+M+  IINIE
Sbjct: 61  FQAGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIE 120

Query: 121 LLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQP- 180
           L+ ++IIKHWV+KV  E+D+ENNS V F++IYPLEI I +LV +MI AV      IDQP 
Sbjct: 121 LVTDQIIKHWVKKV--EDDKENNSGV-FEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQ 180

Query: 181 -LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHM 240
             MVPTSDSA++SMLKRVENEEIMK GD +SI+CV+CLE+ISKEEKGSE  VLQMPCLHM
Sbjct: 181 VRMVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHM 240

Query: 241 FHEECIRKWLKTSHYCPTCRFSMPIDN 266
           FHEECIRKWLKTSHYCPTCRFSM I+N
Sbjct: 241 FHEECIRKWLKTSHYCPTCRFSMTINN 254

The following BLAST results are available for this feature:

BLAST of MELO3C018567.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34252.1	3.4e-150	100.00	hypothetical zinc finger protein [Cucumis melo subsp. melo]	[more]
KGN43801.1	1.9e-97	69.00	hypothetical protein Csa_7G067560 [Cucumis sativus]	[more]
XP_011659721.1	3.1e-87	63.57	PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus] >KGN43799.1 ...	[more]
ADN34253.1	1.0e-85	65.68	hypothetical zinc finger protein [Cucumis melo subsp. melo]	[more]
KGN43800.1	1.9e-84	64.42	hypothetical protein Csa_7G067550 [Cucumis sativus]	[more]

BLAST of MELO3C018567.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19950.1	2.6e-11	38.55	RING/U-box superfamily protein	[more]
AT3G58720.2	9.8e-11	51.79	RING/U-box superfamily protein	[more]
AT1G26800.1	2.2e-10	52.83	RING/U-box superfamily protein	[more]
AT5G60820.1	2.2e-10	37.65	RING/U-box superfamily protein	[more]
AT5G59550.1	6.4e-10	42.50	zinc finger (C3HC4-type RING finger) family protein	[more]

BLAST of MELO3C018567.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LPN7\|RNG1L_ARATH	4.7e-10	38.55	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
sp\|Q9LQX2\|MPSR1_ARATH	3.9e-09	52.83	E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ...	[more]
sp\|Q3T0W3\|RN181_BOVIN	3.9e-09	35.96	E3 ubiquitin-protein ligase RNF181 OS=Bos taurus OX=9913 GN=RNF181 PE=2 SV=1	[more]
sp\|Q940T5\|RDUF2_ARATH	1.1e-08	42.50	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
sp\|Q6AXU4\|RN181_RAT	1.1e-08	38.55	E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 ...	[more]

BLAST of MELO3C018567.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GCQ3\|E5GCQ3_CUCME	2.2e-150	100.00	Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A0A0K7L0\|A0A0A0K7L0_CUCSA	1.3e-97	69.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 PE=4 SV=1	[more]
tr\|A0A0A0K493\|A0A0A0K493_CUCSA	2.1e-87	63.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067540 PE=4 SV=1	[more]
tr\|E5GCQ4\|E5GCQ4_CUCME	6.6e-86	65.68	Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A0A0K2A1\|A0A0A0K2A1_CUCSA	1.2e-84	64.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR011016	Znf_RING-CH
IPR001841	Znf_RING

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C018567.2	MELO3C018567.2	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C018567.2.1.CDS.1	MELO3C018567.2.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C018567.2.1.exon.1	MELO3C018567.2.1.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C018567.2.1	MELO3C018567.2.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 212..257 e-value: 5.7E-8 score: 42.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 211..258 e-value: 2.3E-12 score: 46.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 212..258 score: 13.006
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 211..258 e-value: 0.0031 score: 11.6
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 177..264 e-value: 5.0E-18 score: 66.5
None	No IPR available	PANTHER	PTHR44683	FAMILY NOT NAMED	coord: 152..265
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 211..263