MELO3C018539.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C018539.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	pathogenesis-related protein 1-like
Location	chr01 : 991497 .. 992373 (-)
Sequence length	877

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACACCAAAACTTCTCAACATTTTATATATATATCACAACTCCAATTATACAAAACCAAGTAATATGGATGTTCTCAAGCTCTCCCTCTCCCTCTCCCTCTTTTGTGTCCTGACCTTTATCATGCTTCCATCTTCTCTTGCTCAAGACTCACCTCGAGACTTCGTCAATGCCCACAACGCAGCTCGTGCCCAAGTTGGGGTTGGGCCGGTTCACTGGGACGAAAGAGTAGCGAGTTTTGCTCGACAATATGCGAACCAACGCATCAACGACTGTAGGCTAGTGCACTCTGGCGGACCTTACGGGGAGAATATTGCATGGGGCATGCCAGACTTATCAGGCACGGCTGCAGTTCAAATGTGGGTGAATGAGAAGCAGTTCTACAATTATGGCTCCAATACATGTGCGGCTGGTAAGGTGTGTGGTCACTACACTCAAGTTGTGTGGAGGAATTCAGTGAGAATTGGATGTGCCAAAGTGAGATGCACAAATAATCGTGGCACGTTTATCATTTGCAACTATGAACCCCGTGGGAATATCATAGGCCAAAAGCCATATTGAGATATGTAGGGTTTAATTATCTAGCGAAAATAAGATCGTTATTGGTCACTCTAATCAACATGTAGGGTTTAATGTTCATGTCCATATGAACGTTATACAATATACATACACACATATAATGAAAATAAGGAAGGTCATATTATGTGATCAATAATATATATATTTATATATAAATATGGAGGCCATATTTGATATTTATGTGATCAATAGAATAAATAATAGATCTATTTGTATGGTCGTCCCTTAGTTTTCAAAATATATATTTTTAAGTTCCTCTTAAATATTCGAATACGAATGAAGAATCACTTGACTCTCCCT

mRNA sequence

CACACCAAAACTTCTCAACATTTTATATATATATCACAACTCCAATTATACAAAACCAAGTAATATGGATGTTCTCAAGCTCTCCCTCTCCCTCTCCCTCTTTTGTGTCCTGACCTTTATCATGCTTCCATCTTCTCTTGCTCAAGACTCACCTCGAGACTTCGTCAATGCCCACAACGCAGCTCGTGCCCAAGTTGGGGTTGGGCCGGTTCACTGGGACGAAAGAGTAGCGAGTTTTGCTCGACAATATGCGAACCAACGCATCAACGACTGTAGGCTAGTGCACTCTGGCGGACCTTACGGGGAGAATATTGCATGGGGCATGCCAGACTTATCAGGCACGGCTGCAGTTCAAATGTGGGTGAATGAGAAGCAGTTCTACAATTATGGCTCCAATACATGTGCGGCTGGTAAGGTGTGTGGTCACTACACTCAAGTTGTGTGGAGGAATTCAGTGAGAATTGGATGTGCCAAAGTGAGATGCACAAATAATCGTGGCACGTTTATCATTTGCAACTATGAACCCCGTGGGAATATCATAGGCCAAAAGCCATATTGAGATATGTAGGGTTTAATTATCTAGCGAAAATAAGATCGTTATTGGTCACTCTAATCAACATGTAGGGTTTAATGTTCATGTCCATATGAACGTTATACAATATACATACACACATATAATGAAAATAAGGAAGGTCATATTATGTGATCAATAATATATATATTTATATATAAATATGGAGGCCATATTTGATATTTATGTGATCAATAGAATAAATAATAGATCTATTTGTATGGTCGTCCCTTAGTTTTCAAAATATATATTTTTAAGTTCCTCTTAAATATTCGAATACGAATGAAGAATCACTTGACTCTCCCT

Coding sequence (CDS)

ATGGATGTTCTCAAGCTCTCCCTCTCCCTCTCCCTCTTTTGTGTCCTGACCTTTATCATGCTTCCATCTTCTCTTGCTCAAGACTCACCTCGAGACTTCGTCAATGCCCACAACGCAGCTCGTGCCCAAGTTGGGGTTGGGCCGGTTCACTGGGACGAAAGAGTAGCGAGTTTTGCTCGACAATATGCGAACCAACGCATCAACGACTGTAGGCTAGTGCACTCTGGCGGACCTTACGGGGAGAATATTGCATGGGGCATGCCAGACTTATCAGGCACGGCTGCAGTTCAAATGTGGGTGAATGAGAAGCAGTTCTACAATTATGGCTCCAATACATGTGCGGCTGGTAAGGTGTGTGGTCACTACACTCAAGTTGTGTGGAGGAATTCAGTGAGAATTGGATGTGCCAAAGTGAGATGCACAAATAATCGTGGCACGTTTATCATTTGCAACTATGAACCCCGTGGGAATATCATAGGCCAAAAGCCATATTGA

Protein sequence

MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY

Homology

[Close]

BLAST of MELO3C018539.2.1 vs. NCBI nr
Match: XP_008455064.1 (PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo])

HSP 1 Score: 349.4 bits (895), Expect = 6.8e-93
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR
Sbjct: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
           QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG
Sbjct: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY
Sbjct: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]

BLAST of MELO3C018539.2.1 vs. NCBI nr
Match: XP_011658861.1 (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus] >KGN43832.1 hypothetical protein Csa_7G070253 [Cucumis sativus])

HSP 1 Score: 303.1 bits (775), Expect = 5.6e-79
Identity = 140/164 (85.37%), Postives = 150/164 (91.46%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           MDVLKLSLSLSLFCVLTF MLPSSLAQDSP+DF++AHN ARAQ GV PV WDE VASFA 
Sbjct: 1   MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
           QYANQRINDC LVHSGGPYGENIAWGMPDLSGTAAV+MWVNEK+FY+YGSNTCAA +VCG
Sbjct: 61  QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWRNSVRIGCAKV CTNN GTFI CNY+P GN +GQ+PY
Sbjct: 121 HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

[Close]

BLAST of MELO3C018539.2.1 vs. NCBI nr
Match: XP_022952868.1 (pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 299.7 bits (766), Expect = 6.2e-78
Identity = 140/164 (85.37%), Postives = 152/164 (92.68%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           MD+ KLSLS+  + VL+F M  SSLAQDSP+DFVNAHNAARAQVGVGPV WDERVASFAR
Sbjct: 1   MDLFKLSLSI-FYVVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
           QYANQRINDCRLVHSGGPYGENIAWG PDLSGT AV+MWV+EKQFYN  +NTCAAG+VCG
Sbjct: 61  QYANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNY+PRGNIIGQ+P+
Sbjct: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 163

[Close]

BLAST of MELO3C018539.2.1 vs. NCBI nr
Match: XP_023553946.1 (pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.9 bits (764), Expect = 1.1e-77
Identity = 141/164 (85.98%), Postives = 151/164 (92.07%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           MD+ KLSLSL  +  L+F M  SSLAQDSP+DFVNAHNAARAQVGVGPV WDERVASFAR
Sbjct: 1   MDLFKLSLSL-FYVGLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
           QYANQRINDCRLVHSGGPYGENIAWG PDLSGT AV+MWV+EKQFYN  +NTCAAGKVCG
Sbjct: 61  QYANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSANTCAAGKVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNY+PRGNIIGQ+P+
Sbjct: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 163

[Close]

BLAST of MELO3C018539.2.1 vs. NCBI nr
Match: XP_022972506.1 (pathogenesis-related protein PR-1 type-like [Cucurbita maxima])

HSP 1 Score: 295.8 bits (756), Expect = 8.9e-77
Identity = 137/164 (83.54%), Postives = 150/164 (91.46%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           MD+ KLSLSL  + VL+F M  SSLAQDSP+DFVNAHNAARAQVGVGP+ WDERVASFAR
Sbjct: 1   MDLFKLSLSL-FYVVLSFAMFHSSLAQDSPQDFVNAHNAARAQVGVGPIRWDERVASFAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
           QYANQRINDCRLVHSGGPYGENIAWG PDLSGT AV+MWV+EKQFYN  +NTCAAGKVCG
Sbjct: 61  QYANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSTNTCAAGKVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWRNSVRIGCAKVRCTNNRGTFI CNY+P GN++GQ+P+
Sbjct: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFITCNYDPPGNVVGQRPF 163

[Close]

BLAST of MELO3C018539.2.1 vs. TAIR10
Match: AT2G14610.1 (pathogenesis-related gene 1)

HSP 1 Score: 213.8 bits (543), Expect = 8.1e-56
Identity = 100/164 (60.98%), Postives = 120/164 (73.17%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           M+    S  L +F  L   ++  S AQDSP+D++  HN AR  VGVGP+ WDERVA++AR
Sbjct: 1   MNFTGYSRFLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
            YA Q   +CRL+HSGGPYGEN+AWG  DLSG +AV MWV+EK  YNY +NTC    VCG
Sbjct: 61  SYAEQLRGNCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWR SVR+GCAKVRC NN GT I CNY+PRGN + +KPY
Sbjct: 121 HYTQVVWRKSVRLGCAKVRC-NNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of MELO3C018539.2.1 vs. TAIR10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 207.2 bits (526), Expect = 7.6e-54
Identity = 96/158 (60.76%), Postives = 118/158 (74.68%), Query Frame = 0


Query: 9   SLSLFCVLTF--IMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQR 68
           S +LF  +TF  +++    AQDSP+DF+  HN ARA+VGVGP+ WDE+VA++AR YANQR
Sbjct: 7   SQNLFLAITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQR 66

Query: 69  INDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVV 128
             DC + HS G YGENIAW    ++G AAV MWV+E+  Y+Y SNTCA  K CGHYTQVV
Sbjct: 67  KGDCAMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVV 126

Query: 129 WRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           WRNS R+GCAKVRC NN  TFI CNY+P GN +G+ PY
Sbjct: 127 WRNSERLGCAKVRC-NNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of MELO3C018539.2.1 vs. TAIR10
Match: AT2G14580.1 (basic pathogenesis-related protein 1)

HSP 1 Score: 206.5 bits (524), Expect = 1.3e-53
Identity = 101/164 (61.59%), Postives = 117/164 (71.34%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           M V   S  L +   L   ++    AQDS +D+VNAHN AR+Q+GVGP+ WDE +A++AR
Sbjct: 1   MKVTSYSRILIILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
            YANQ   DCRLVHS GPYGEN+A    DLSG AAV +WVNEK  YNY +NTC    VCG
Sbjct: 61  NYANQLKGDCRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWRNSVR+GCAKVRC NN GT I CNY+P GN   QKPY
Sbjct: 121 HYTQVVWRNSVRLGCAKVRC-NNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of MELO3C018539.2.1 vs. TAIR10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 190.7 bits (483), Expect = 7.3e-49
Identity = 87/159 (54.72%), Postives = 114/159 (71.70%), Query Frame = 0


Query: 8   LSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRI 67
           L  ++  +L   +   SLA+D  + F+ AHN AR +VG+ P+ WD+ VA++A  YANQRI
Sbjct: 4   LKTNILFLLAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRI 63

Query: 68  NDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTC--AAGKVCGHYTQV 127
           NDC LVHS GP+GENIA    ++S   A +MW+NEKQ+Y+Y SNTC    G  C HYTQV
Sbjct: 64  NDCALVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQV 123

Query: 128 VWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           VW+N+VR+GCAKV C N+ GTFI CNY+P GN IG+KP+
Sbjct: 124 VWKNTVRLGCAKVVC-NSGGTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of MELO3C018539.2.1 vs. TAIR10
Match: AT2G19990.1 (pathogenesis-related protein-1-like)

HSP 1 Score: 176.0 bits (445), Expect = 1.9e-44
Identity = 72/135 (53.33%), Postives = 100/135 (74.07%), Query Frame = 0


Query: 30  PRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCRLVHSGGPYGENIAWGMPD 89
           P++ +  HN ARA VGVGP+ W+E +A++A+ YA++R  DC + HS GP+GEN+A G   
Sbjct: 42  PQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAGWGT 101

Query: 90  LSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNNRGTFII 149
           +SG  A + W+ EK+ Y+Y SNTC    VCGHYTQ+VWR+SVR+GCA VRC N+   ++I
Sbjct: 102 MSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRCKNDEYIWVI 161

Query: 150 CNYEPRGNIIGQKPY 165
           C+Y+P GN IGQ+PY
Sbjct: 162 CSYDPPGNYIGQRPY 176

[Close]

BLAST of MELO3C018539.2.1 vs. Swiss-Prot
Match: sp|P35792|PR12_HORVU (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.8e-57
Identity = 106/166 (63.86%), Postives = 124/166 (74.70%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           M   KL++ L+L   +   M+  S AQ+SP+D+V+ HNAAR+ VGVG V W  ++ +FA+
Sbjct: 1   MQTPKLAILLAL--AMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQ 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGM--PDLSGTAAVQMWVNEKQFYNYGSNTCAAGKV 120
            YANQRINDC+L HSGGPYGENI WG    D     AV  WVNEK+ YNYGSNTCAAGKV
Sbjct: 61  NYANQRINDCKLQHSGGPYGENIFWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKV 120

Query: 121 CGHYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           CGHYTQVVWR S  IGCA+V C NNRG FI CNYEPRGNI+GQKPY
Sbjct: 121 CGHYTQVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of MELO3C018539.2.1 vs. Swiss-Prot
Match: sp|P35793|PR13_HORVU (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.6e-56
Identity = 105/166 (63.25%), Postives = 125/166 (75.30%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           M   KL + L+L   ++  M+  S AQ+SP+D+V+ HNAARA VGVG V W  ++ +FA+
Sbjct: 1   MQTPKLVILLAL--AMSAAMVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQ 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGM--PDLSGTAAVQMWVNEKQFYNYGSNTCAAGKV 120
            YANQRINDC+L HSGGPYGENI WG    D   + AV  WV+EK+ Y+YGSNTCAAGKV
Sbjct: 61  NYANQRINDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKV 120

Query: 121 CGHYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           CGHYTQVVWR S  IGCA+V C NNRG FI CNYEPRGNI+GQKPY
Sbjct: 121 CGHYTQVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of MELO3C018539.2.1 vs. Swiss-Prot
Match: sp|Q05968|PR1_HORVU (Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.6e-56
Identity = 105/166 (63.25%), Postives = 125/166 (75.30%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           M   KL++ L+L   +   M+  S AQ+SP+D+V+ HNAAR+ VGVG V W  ++ +FA+
Sbjct: 1   MQTPKLAILLAL--AMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQ 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGM--PDLSGTAAVQMWVNEKQFYNYGSNTCAAGKV 120
            YANQRINDC+L HSGGPYGENI WG    D   + AV  WV+EK+ Y+YGSNTCAAGKV
Sbjct: 61  NYANQRINDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKV 120

Query: 121 CGHYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           CGHYTQVVWR S  IGCA+V C NNRG FI CNYEPRGNIIGQKPY
Sbjct: 121 CGHYTQVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIIGQKPY 164

[Close]

BLAST of MELO3C018539.2.1 vs. Swiss-Prot
Match: sp|P33154|PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.5e-54
Identity = 100/164 (60.98%), Postives = 120/164 (73.17%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           M+    S  L +F  L   ++  S AQDSP+D++  HN AR  VGVGP+ WDERVA++AR
Sbjct: 1   MNFTGYSRFLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
            YA Q   +CRL+HSGGPYGEN+AWG  DLSG +AV MWV+EK  YNY +NTC    VCG
Sbjct: 61  SYAEQLRGNCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWR SVR+GCAKVRC NN GT I CNY+PRGN + +KPY
Sbjct: 121 HYTQVVWRKSVRLGCAKVRC-NNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of MELO3C018539.2.1 vs. Swiss-Prot
Match: sp|Q41359|PR1_SAMNI (Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.5e-54
Identity = 102/158 (64.56%), Postives = 122/158 (77.22%), Query Frame = 0


Query: 9   SLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRIN 68
           S++L CV+  +M+  S+AQ+SP+D+V+AHNAAR+ V VGPV WDE VA+FARQYA  R  
Sbjct: 11  SVALVCVVALVMVQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAG 70

Query: 69  DCRLVHSGGP-YGENIAWGMP-DLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVV 128
           DCRLVHSG P YGEN+A+G   +L+G  AV MWV E+  YN  +NTCA GKVCGHYTQVV
Sbjct: 71  DCRLVHSGDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVV 130

Query: 129 WRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           WRNSVRIGCA+VRC NN   FI CNY P GN  GQ+PY
Sbjct: 131 WRNSVRIGCARVRC-NNGAWFITCNYSPPGNYAGQRPY 167

[Close]

BLAST of MELO3C018539.2.1 vs. TrEMBL
Match: tr|A0A1S3C0R9|A0A1S3C0R9_CUCME (pathogenesis-related protein PRB1-2-like OS=Cucumis melo OX=3656 GN=LOC103495329 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 4.5e-93
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR
Sbjct: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
           QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG
Sbjct: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY
Sbjct: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]

BLAST of MELO3C018539.2.1 vs. TrEMBL
Match: tr|A0A0A0K6A4|A0A0A0K6A4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G070253 PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.7e-79
Identity = 140/164 (85.37%), Postives = 150/164 (91.46%), Query Frame = 0


Query: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60
           MDVLKLSLSLSLFCVLTF MLPSSLAQDSP+DF++AHN ARAQ GV PV WDE VASFA 
Sbjct: 1   MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL 60

Query: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120
           QYANQRINDC LVHSGGPYGENIAWGMPDLSGTAAV+MWVNEK+FY+YGSNTCAA +VCG
Sbjct: 61  QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           HYTQVVWRNSVRIGCAKV CTNN GTFI CNY+P GN +GQ+PY
Sbjct: 121 HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

[Close]

BLAST of MELO3C018539.2.1 vs. TrEMBL
Match: tr|H3K3Z1|H3K3Z1_CUCME (Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis melo OX=3656 GN=PR1-1a PE=2 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 7.2e-75
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 27  QDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCRLVHSGGPYGENIAWG 86
           QDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCRLVHSGGPYGENIAWG
Sbjct: 1   QDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCRLVHSGGPYGENIAWG 60

Query: 87  MPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNNRGT 146
           MPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNNRGT
Sbjct: 61  MPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNNRGT 120

Query: 147 FIICNYEPRG 157
           FIICNYEPRG
Sbjct: 121 FIICNYEPRG 130

[Close]

BLAST of MELO3C018539.2.1 vs. TrEMBL
Match: tr|A0A0A0K2V9|A0A0A0K2V9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G070255 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 7.7e-69
Identity = 117/160 (73.12%), Postives = 143/160 (89.38%), Query Frame = 0


Query: 6   LSLSLSLFCVLT-FIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYAN 65
           L+LS  LFCVL+ F MLPSSLAQDSP+D+VN+HN ARA VGVGP+ WDE+VA+++R YAN
Sbjct: 4   LNLSCILFCVLSCFTMLPSSLAQDSPQDYVNSHNHARAAVGVGPIKWDEKVANYSRYYAN 63

Query: 66  QRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQ 125
           +R+NDCRLVHS GPYGENIAWG PDLSG  AV++WV+EKQ+YNY SN+CA+GKVCGHYTQ
Sbjct: 64  KRMNDCRLVHSNGPYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASGKVCGHYTQ 123

Query: 126 VVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           VVW+NS+R+GCAKV+C N  G FI+CNY+PRGNI+GQ+PY
Sbjct: 124 VVWKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

[Close]

BLAST of MELO3C018539.2.1 vs. TrEMBL
Match: tr|A0A1S3C050|A0A1S3C050_CUCME (pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC103495328 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.2e-66
Identity = 115/160 (71.88%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 6   LSLSLSLFCVLT-FIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYAN 65
           L+LS  LFCVL  F MLPSSLAQDSP+D++N HN ARA V V  + WDE+VA+++RQYAN
Sbjct: 4   LNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQYAN 63

Query: 66  QRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQ 125
            R+NDCRLVHS GPYGENIAWG PDLSGT AV++WVNEKQ+Y+Y +N+CA+GKVCGHYTQ
Sbjct: 64  LRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGHYTQ 123

Query: 126 VVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 165
           VVW+NSVR+GCAKV+C N  G FI+CNY+PRGNI+GQ+PY
Sbjct: 124 VVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 163

The following BLAST results are available for this feature:

BLAST of MELO3C018539.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455064.1	6.8e-93	100.00	PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo]	[more]
XP_011658861.1	5.6e-79	85.37	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus] >...	[more]
XP_022952868.1	6.2e-78	85.37	pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_023553946.1	1.1e-77	85.98	pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022972506.1	8.9e-77	83.54	pathogenesis-related protein PR-1 type-like [Cucurbita maxima]	[more]

BLAST of MELO3C018539.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14610.1	8.1e-56	60.98	pathogenesis-related gene 1	[more]
AT4G33720.1	7.6e-54	60.76	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14580.1	1.3e-53	61.59	basic pathogenesis-related protein 1	[more]
AT3G19690.1	7.3e-49	54.72	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G19990.1	1.9e-44	53.33	pathogenesis-related protein-1-like	[more]

BLAST of MELO3C018539.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P35792\|PR12_HORVU	1.8e-57	63.86	Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
sp\|P35793\|PR13_HORVU	1.6e-56	63.25	Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
sp\|Q05968\|PR1_HORVU	1.6e-56	63.25	Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
sp\|P33154\|PR1_ARATH	1.5e-54	60.98	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1...	[more]
sp\|Q41359\|PR1_SAMNI	2.5e-54	64.56	Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1	[more]

BLAST of MELO3C018539.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C0R9\|A0A1S3C0R9_CUCME	4.5e-93	100.00	pathogenesis-related protein PRB1-2-like OS=Cucumis melo OX=3656 GN=LOC103495329...	[more]
tr\|A0A0A0K6A4\|A0A0A0K6A4_CUCSA	3.7e-79	85.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G070253 PE=3 SV=1	[more]
tr\|H3K3Z1\|H3K3Z1_CUCME	7.2e-75	100.00	Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis melo OX=3656 GN=PR1-1a P...	[more]
tr\|A0A0A0K2V9\|A0A0A0K2V9_CUCSA	7.7e-69	73.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G070255 PE=3 SV=1	[more]
tr\|A0A1S3C050\|A0A1S3C050_CUCME	1.2e-66	71.88	pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC103495328 PE=3...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

Vocabulary: **INTERPRO**
Term	Definition
IPR034111	SCP_PR1-like
IPR018244	Allrgn_V5/Tpx1_CS
IPR035940	CAP_sf
IPR014044	CAP_domain
IPR001283	Allrgn_V5/Tpx1

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C018539.2	MELO3C018539.2	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C018539.2.1.five_prime_UTR.1	MELO3C018539.2.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C018539.2.1.CDS.1	MELO3C018539.2.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C018539.2.1.exon.1	MELO3C018539.2.1.exon.1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C018539.2.1.three_prime_UTR.1	MELO3C018539.2.1.three_prime_UTR.1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C018539.2.1	MELO3C018539.2.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 95..108 score: 44.51 coord: 49..67 score: 35.68 coord: 119..135 score: 66.19 coord: 147..160 score: 50.53
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 9..164
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 28..160 e-value: 1.7E-64 score: 230.2
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 34..152 e-value: 1.2E-22 score: 80.9
IPR035940	CAP superfamily	GENE3D	G3DSA:3.40.33.10		coord: 28..164 e-value: 3.8E-46 score: 158.7
IPR035940	CAP superfamily	SUPERFAMILY	SSF55797	PR-1-like	coord: 13..164
None	No IPR available	PANTHER	PTHR10334:SF314	SUBFAMILY NOT NAMED	coord: 9..164
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 147..158
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 120..130
IPR034111	Pathogenesis-related protein 1-like, SCP domain	CDD	cd05381	SCP_PR-1_like	coord: 30..164 e-value: 1.77531E-86 score: 251.398