MELO3C018531T2 (mRNA) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.AATGCGAATTTATGTAAATGTAAATTCTAAAACTCTTTCATCCTCCAGAAGAACAAACAAAATCACCTGAGCCCGTAAGGCGTAAACTACTCTTTCTTCTTCTTCAACAGCTAACTATGTCCTTACCTGCCGTTCTTTCACCGCCGTCCCTTTTTTCCATTCCTCAATCTCAACCGCCATTTCCAACTTCTCGAACCTCGCTTCTTTCCCATCCCTTCCAAATTTCTTATACGCTCCTCCGGGCTACCAGAAGAACCTCCAATTTCTCTCAGGTCCATTTTGATTTCTCTTCCCATCTATTCACCAATTTTTTTTTCCTGTGTTTTTGTTCTTAGTTTGCTCAATTAACTTCCAGGGAGTTGATAATTTTGTGGACGAGCGGCGTAATTGGAACCGCTCCGACTTCGACTTAATCGGTGGAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGATGACGATGAGGAAGAGGATAGAAGTTTGGATCTTTTGGTTCGTTTTGTTGAGAATGTTTTTAGGAAATCCTCGAGGCGAGCTCGGAAGGCTGTGAGATCGGTTCTTCCTCAATCCATCCCTACTAAACTGGTAAAGTTTATTCAGCTATGAGCTTAATCGTTGATTTTTTTTTTTTTCTTCCTGTTTTGTTGTTGGTTCATTGTGTATCAGTACTTGTTTTTCCAGGTGGCATTTTCTGTTAATGGGGTGCTAATGCTGGCGTTTTTGTGGGTTTTGAAAGCATTTCTTGAGGTAAATGCTTCGAAATTTAGCCATTTTTAATGCTTTTCCTTTGGTATTTCCATATGGAATTGTTTCCTCAGCAATATAGGTAGTTGTAAGCTTTTCATTGCAAAGGAGAAATTTGTGTTCGAAATTTAACGATAATATTGGAGATGGAATTATTATGACGCTTTGCTTGTTATTTTGCTTGTGCATGGCAAACGTATCAACCGTAAAAAAAAAAAACAAGAAAAAACGTGAAAAGAAGACAAAAAGAAGAGATGTCTTAGGCTTCTCTTTGTTGGAAGAAGCTATTCAATGGCCTCCTGTTTAGTCATACTTTCTGAAAGTCAGCAAATTCAATTGGTTTAATGTTTAGAGCCTTAAGAGTTTTTTTTCCCATCTTGAAGTTCCCTCCACAAGATATTTGTAATGGTTGCTTGTTGATAAGAGTCTCTTTGTAACTCCTTTAGTATTGCTGGTGCCATGGGCTAACTCCAACTCCAACTCCAATATATGTTCTGATACGAATCCACCTCA AATGCGAATTTATGTAAATGTAAATTCTAAAACTCTTTCATCCTCCAGAAGAACAAACAAAATCACCTGAGCCCGTAAGGCGTAAACTACTCTTTCTTCTTCTTCAACAGCTAACTATGTCCTTACCTGCCGTTCTTTCACCGCCGTCCCTTTTTTCCATTCCTCAATCTCAACCGCCATTTCCAACTTCTCGAACCTCGCTTCTTTCCCATCCCTTCCAAATTTCTTATACGCTCCTCCGGGCTACCAGAAGAACCTCCAATTTCTCTCAGGGAGTTGATAATTTTGTGGACGAGCGGCGTAATTGGAACCGCTCCGACTTCGACTTAATCGGTGGAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGATGACGATGAGGAAGAGGATAGAAGTTTGGATCTTTTGGTTCGTTTTGTTGAGAATGTTTTTAGGAAATCCTCGAGGCGAGCTCGGAAGGCTGTGAGATCGGTTCTTCCTCAATCCATCCCTACTAAACTGGTGGCATTTTCTGTTAATGGGGTGCTAATGCTGGCGTTTTTGTGGGTTTTGAAAGCATTTCTTGAGAAAAAACGTGAAAAGAAGACAAAAAGAAGAGATGTCTTAGGCTTCTCTTTGTTGGAAGAAGCTATTCAATGGCCTCCTGTTTAGTCATACTTTCTGAAAGTCAGCAAATTCAATTGGTTTAATGTTTAGAGCCTTAAGAGTTTTTTTTCCCATCTTGAAGTTCCCTCCACAAGATATTTGTAATGGTTGCTTGTTGATAAGAGTCTCTTTGTAACTCCTTTAGTATTGCTGGTGCCATGGGCTAACTCCAACTCCAACTCCAATATATGTTCTGATACGAATCCACCTCA ATGTCCTTACCTGCCGTTCTTTCACCGCCGTCCCTTTTTTCCATTCCTCAATCTCAACCGCCATTTCCAACTTCTCGAACCTCGCTTCTTTCCCATCCCTTCCAAATTTCTTATACGCTCCTCCGGGCTACCAGAAGAACCTCCAATTTCTCTCAGGGAGTTGATAATTTTGTGGACGAGCGGCGTAATTGGAACCGCTCCGACTTCGACTTAATCGGTGGAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGATGACGATGAGGAAGAGGATAGAAGTTTGGATCTTTTGGTTCGTTTTGTTGAGAATGTTTTTAGGAAATCCTCGAGGCGAGCTCGGAAGGCTGTGAGATCGGTTCTTCCTCAATCCATCCCTACTAAACTGGTGGCATTTTCTGTTAATGGGGTGCTAATGCTGGCGTTTTTGTGGGTTTTGAAAGCATTTCTTGAGAAAAAACGTGAAAAGAAGACAAAAAGAAGAGATGTCTTAGGCTTCTCTTTGTTGGAAGAAGCTATTCAATGGCCTCCTGTTTAG MSLPAVLSPPSLFSIPQSQPPFPTSRTSLLSHPFQISYTLLRATRRTSNFSQGVDNFVDERRNWNRSDFDLIGGEEEEEEEEEEDDDEEEDRSLDLLVRFVENVFRKSSRRARKAVRSVLPQSIPTKLVAFSVNGVLMLAFLWVLKAFLEKKREKKTKRRDVLGFSLLEEAIQWPPV*
BLAST of MELO3C018531T2 vs. TrEMBL
Match: A0A0A0K2W4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070780 PE=4 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 1.8e-70 Identity = 138/150 (92.00%), Postives = 144/150 (96.00%), Query Frame = 1
BLAST of MELO3C018531T2 vs. TrEMBL
Match: A0A061E0E9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007264 PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 2.7e-37 Identity = 96/157 (61.15%), Postives = 111/157 (70.70%), Query Frame = 1
BLAST of MELO3C018531T2 vs. TrEMBL
Match: M5VLD7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011398mg PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 3.9e-36 Identity = 90/164 (54.88%), Postives = 112/164 (68.29%), Query Frame = 1
BLAST of MELO3C018531T2 vs. TrEMBL
Match: M5VKP6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011398mg PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 6.6e-36 Identity = 89/161 (55.28%), Postives = 111/161 (68.94%), Query Frame = 1
BLAST of MELO3C018531T2 vs. TrEMBL
Match: A0A0B0NWW4_GOSAR (ATP phosphoribosyltransferase regulatory subunit OS=Gossypium arboreum GN=F383_00468 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.4e-33 Identity = 88/155 (56.77%), Postives = 107/155 (69.03%), Query Frame = 1
BLAST of MELO3C018531T2 vs. TAIR10
Match: AT4G33780.1 (AT4G33780.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 144.4 bits (363), Expect = 6.6e-35 Identity = 81/149 (54.36%), Postives = 100/149 (67.11%), Query Frame = 1
BLAST of MELO3C018531T2 vs. TAIR10
Match: AT1G69935.1 (AT1G69935.1 short hypocotyl in white light1) HSP 1 Score: 74.3 bits (181), Expect = 8.3e-14 Identity = 41/124 (33.06%), Postives = 72/124 (58.06%), Query Frame = 1
BLAST of MELO3C018531T2 vs. NCBI nr
Match: gi|659110111|ref|XP_008455053.1| (PREDICTED: uncharacterized protein LOC103495323 [Cucumis melo]) HSP 1 Score: 296.6 bits (758), Expect = 2.9e-77 Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1
BLAST of MELO3C018531T2 vs. NCBI nr
Match: gi|778724801|ref|XP_004136931.2| (PREDICTED: uncharacterized protein LOC101213497 [Cucumis sativus]) HSP 1 Score: 273.5 bits (698), Expect = 2.7e-70 Identity = 138/150 (92.00%), Postives = 144/150 (96.00%), Query Frame = 1
BLAST of MELO3C018531T2 vs. NCBI nr
Match: gi|590687524|ref|XP_007042688.1| (Uncharacterized protein TCM_007264 [Theobroma cacao]) HSP 1 Score: 163.3 bits (412), Expect = 3.9e-37 Identity = 96/157 (61.15%), Postives = 111/157 (70.70%), Query Frame = 1
BLAST of MELO3C018531T2 vs. NCBI nr
Match: gi|645261355|ref|XP_008236254.1| (PREDICTED: uncharacterized protein LOC103335039 [Prunus mume]) HSP 1 Score: 162.5 bits (410), Expect = 6.6e-37 Identity = 92/161 (57.14%), Postives = 113/161 (70.19%), Query Frame = 1
BLAST of MELO3C018531T2 vs. NCBI nr
Match: gi|470106721|ref|XP_004289710.1| (PREDICTED: uncharacterized protein LOC101310175 [Fragaria vesca subsp. vesca]) HSP 1 Score: 160.6 bits (405), Expect = 2.5e-36 Identity = 95/164 (57.93%), Postives = 117/164 (71.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
|