MELO3C018131T2 (mRNA) Melon (DHL92) v3.5.1

NameMELO3C018131T2
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionOxygen-evolving enhancer protein 3-1
Locationchr4 : 10044712 .. 10046366 (-)
Sequence length1429
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTATATATTATATTAATATTTATAACATTATTTTATTTTTGAACCTGATGGGAAGAAATTTAACTTTTTATAACAAAATTACCAGAATAACCTTGGTGAGGATATCCTTTGGGTGGACAATGAAGAAACTGAAAAAGGGAAGCGGATAACTGAAATTAGAAGCTCTGCTTCTTCCTTTTGCTAATTTCCTCCGTTTCTCATCTTAGTCTTCCCATCAAATGGCTCGTCTTGCAAATTTAAACGGGAAATTCTCCGCCATTCCCAATCTCCCAAAGCTTCAAAACATTCATAAGAAACTCAAAATTACTGGGTTTCTCAAGAAACAAACGGATGTTTCTTCTCATCAAATCTCATTGACAAGAAGATTGGCTTTAACCAGCCTTGTCTCTGTTGCTCTCTTTGGCAATGCATCCCCCGAGATTGCTTCCGCTAACGAGTATTGGCTTGATGGCCCTTTGCCTGTCCCTTCTGTTGACAACAGTAAGCTTTCTCATTGAACAAGTTTGAAATGTTCGTTTGTGTTTTTGTTTTCCTTATCTGGGTGTACCTCCAAATTGGAAAATTCGAAATTGTTTGGTTAGTTTGACAGTAGAGACTAGAATTTGCTATGAATTATTTGTTACAGACATTGCGAATGAGCAAACAGGGACACGATCGTTTCTGAAGACAGGGATATACATAGCTAACATAGGAACAAAAGGAAGAAAATACAGGTTGAAAAAATATGCATTTGATCTTCTAGCTATGGCAGATTTGATTGGGAAAGATACTTTGAATTATGTCAGAAAGTATCTTCGACTCAAATCAACCTTCATGTACTATGATTTTGACAAAGTTATCTCGGCAGCAGCAGACGATGAGAAGCAGCCTCTTGTTGATTTAGCGAACAGATTATTTGACAATTTCGAAAAGGTAAAATGCAGATAAGTTTTACAAGTTTCTTCAAATATATGCAAATTTTCAAGCTGAAGTACCTCCTTTTGTACTTTGCAGCTTGAAAATGCAGCAAAGCAAAAGAATCTGAGTGAAACTGAATCCTACTACCAACAAACAACACCGATACTTCAAGAAGTCATGGATAGAATGGCATAAATTGAACAAATTAATTGATCAGAAGCGTTTGGAGGAACTGCTTGCTTTTCCATAATTCTTCTGTGGTGCTTGTTCACAATTAGTTTCCATTTTTCCCATGTATTTCAATGCGGCTTAAAGATGCAAAATCAAGACAAACAGTGCAGTGAGTTTCACAAATTATAGTTCAACTATCTGGATTTTGTCTTATATGGAAATGAAGACAGATAATTTGCAGCATGCTTGGCACAATTAAAGAGGCTTAATTGTAAATAAAAGTGAAGGGGAACAAAAGAATCTTACTTTCATTGATACAATCAGATCTCTTTTGCTATACATAACTAAGCCTAAGTCAGAATCATTCTCATATTTCATTATCAAATAGTTGATTTGCCAATGTATAGGCAATGTTCGAGCATAAATCTTAAGGTCGTGTATTGGTTAGACGCCGAGGAGTACCGATCTCGCAAGCATTGACCCGGGCAGCAAAGCGAAGCGAGCAGAGTGATTCATTGGCCGAGGAGGAATCAGGAGAGATATTTACAAACATCAACGTCTTTGAATCTCCACCGAGACACGGCTG

mRNA sequence

TCTATATATTATATTAATATTTATAACATTATTTTATTTTTGAACCTGATGGGAAGAAATTTAACTTTTTATAACAAAATTACCAGAATAACCTTGGTGAGGATATCCTTTGGGTGGACAATGAAGAAACTGAAAAAGGGAAGCGGATAACTGAAATTAGAAGCTCTGCTTCTTCCTTTTGCTAATTTCCTCCGTTTCTCATCTTAGTCTTCCCATCAAATGGCTCGTCTTGCAAATTTAAACGGGAAATTCTCCGCCATTCCCAATCTCCCAAAGCTTCAAAACATTCATAAGAAACTCAAAATTACTGGGTTTCTCAAGAAACAAACGGATGTTTCTTCTCATCAAATCTCATTGACAAGAAGATTGGCTTTAACCAGCCTTGTCTCTGTTGCTCTCTTTGGCAATGCATCCCCCGAGATTGCTTCCGCTAACGAGTATTGGCTTGATGGCCCTTTGCCTGTCCCTTCTGTTGACAACAACATTGCGAATGAGCAAACAGGGACACGATCGTTTCTGAAGACAGGGATATACATAGCTAACATAGGAACAAAAGGAAGAAAATACAGGTTGAAAAAATATGCATTTGATCTTCTAGCTATGGCAGATTTGATTGGGAAAGATACTTTGAATTATGTCAGAAAGTATCTTCGACTCAAATCAACCTTCATGTACTATGATTTTGACAAAGTTATCTCGGCAGCAGCAGACGATGAGAAGCAGCCTCTTGTTGATTTAGCGAACAGATTATTTGACAATTTCGAAAAGCTTGAAAATGCAGCAAAGCAAAAGAATCTGAGTGAAACTGAATCCTACTACCAACAAACAACACCGATACTTCAAGAAGTCATGGATAGAATGGCATAAATTGAACAAATTAATTGATCAGAAGCGTTTGGAGGAACTGCTTGCTTTTCCATAATTCTTCTGTGGTGCTTGTTCACAATTAGTTTCCATTTTTCCCATGTATTTCAATGCGGCTTAAAGATGCAAAATCAAGACAAACAGTGCAGTGAGTTTCACAAATTATAGTTCAACTATCTGGATTTTGTCTTATATGGAAATGAAGACAGATAATTTGCAGCATGCTTGGCACAATTAAAGAGGCTTAATTGTAAATAAAAGTGAAGGGGAACAAAAGAATCTTACTTTCATTGATACAATCAGATCTCTTTTGCTATACATAACTAAGCCTAAGTCAGAATCATTCTCATATTTCATTATCAAATAGTTGATTTGCCAATGTATAGGCAATGTTCGAGCATAAATCTTAAGGTCGTGTATTGGTTAGACGCCGAGGAGTACCGATCTCGCAAGCATTGACCCGGGCAGCAAAGCGAAGCGAGCAGAGTGATTCATTGGCCGAGGAGGAATCAGGAGAGATATTTACAAACATCAACGTCTTTGAATCTCCACCGAGACACGGCTG

Coding sequence (CDS)

ATGGCTCGTCTTGCAAATTTAAACGGGAAATTCTCCGCCATTCCCAATCTCCCAAAGCTTCAAAACATTCATAAGAAACTCAAAATTACTGGGTTTCTCAAGAAACAAACGGATGTTTCTTCTCATCAAATCTCATTGACAAGAAGATTGGCTTTAACCAGCCTTGTCTCTGTTGCTCTCTTTGGCAATGCATCCCCCGAGATTGCTTCCGCTAACGAGTATTGGCTTGATGGCCCTTTGCCTGTCCCTTCTGTTGACAACAACATTGCGAATGAGCAAACAGGGACACGATCGTTTCTGAAGACAGGGATATACATAGCTAACATAGGAACAAAAGGAAGAAAATACAGGTTGAAAAAATATGCATTTGATCTTCTAGCTATGGCAGATTTGATTGGGAAAGATACTTTGAATTATGTCAGAAAGTATCTTCGACTCAAATCAACCTTCATGTACTATGATTTTGACAAAGTTATCTCGGCAGCAGCAGACGATGAGAAGCAGCCTCTTGTTGATTTAGCGAACAGATTATTTGACAATTTCGAAAAGCTTGAAAATGCAGCAAAGCAAAAGAATCTGAGTGAAACTGAATCCTACTACCAACAAACAACACCGATACTTCAAGAAGTCATGGATAGAATGGCATAA

Protein sequence

MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA*
BLAST of MELO3C018131T2 vs. Swiss-Prot
Match: PNSL3_ARATH (Photosynthetic NDH subunit of lumenal location 3, chloroplastic OS=Arabidopsis thaliana GN=PNSL3 PE=1 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 4.8e-66
Identity = 128/220 (58.18%), Postives = 161/220 (73.18%), Query Frame = 1

Query: 1   MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSH--QISLTRRLALTSLVSV 60
           MA   +LN   + +P+LPKL    K  K +GF  ++T+       + +TRR+ L   VS+
Sbjct: 1   MAHFIDLNSLTNTLPSLPKLPESRKTGKSSGFACRRTEEFQEPDSVQITRRMTLGFAVSI 60

Query: 61  AL---FGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRK 120
            L    G  +  +A  N +W+DGPLP+P + NNI NE+TGTR+F+K G+Y+A+IGTKGR 
Sbjct: 61  GLTGILGENNVSLAQDNGFWIDGPLPIPPIYNNIVNEKTGTRTFIKKGVYVADIGTKGRM 120

Query: 121 YRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLAN 180
           YR+KK AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFD +ISAAA ++KQPL DLAN
Sbjct: 121 YRVKKNAFDLLAMEDLIGPDTLNYVKKYLRLKSTFLFYDFDNLISAAASEDKQPLTDLAN 180

Query: 181 RLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           RLFDNFEKLE+AAK KNL+ETES Y+ T  +LQEVM RMA
Sbjct: 181 RLFDNFEKLEDAAKTKNLAETESCYKDTKFLLQEVMTRMA 220

BLAST of MELO3C018131T2 vs. Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3)

HSP 1 Score: 84.3 bits (207), Expect = 1.7e-15
Identity = 64/223 (28.70%), Postives = 107/223 (47.98%), Query Frame = 1

Query: 1   MARLANLNGKFSAIPNLPKLQNIHKKLKITGFL----KKQTDVSSHQISLTRRLALTSLV 60
           MA +  L+G   A+       N   +L  +G +    + +  V + Q   T R ++  LV
Sbjct: 1   MASMGGLHGASPAVLEGSLKINGSSRLNGSGRVAVAQRSRLVVRAQQSEETSRRSVIGLV 60

Query: 61  SVALFGNASPEIASANEYWLD-GPLPVPSVDNNIANEQTG-TRSF---LKTGIYIANIGT 120
           +  L G +  +   A+   +  GP P PS       + +   R F   LK   Y+  +  
Sbjct: 61  AAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQARDFALALKDRFYLQPLPP 120

Query: 121 KGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLV 180
                R K+ A D++ +  LI +    YV+  LR K++++ YD + +IS+   DEK+ L 
Sbjct: 121 TEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIISSKPKDEKKSLK 180

Query: 181 DLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRM 215
           DL  +LFD  + L+ AAK+K+ S+ E YY +T   L EV+ ++
Sbjct: 181 DLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 223

BLAST of MELO3C018131T2 vs. Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-12
Identity = 56/187 (29.95%), Postives = 89/187 (47.59%), Query Frame = 1

Query: 33  LKKQTDVSSHQISLTRRLALTSLVSVALFGNASPE--IASANEYWLDGPLPVPSVDNNIA 92
           ++ Q +VS  + S   R ++  LV+  L G +  +   A A    + GP P+PS      
Sbjct: 47  IRAQQNVSVPESS---RRSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGP-PLPSGGLPGT 106

Query: 93  NEQTGTRSF---LKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLK 152
           +     R F   LK   YI  +       R K  A +++ +   I K    YV+  LRL+
Sbjct: 107 DNSDQARDFSLALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLR 166

Query: 153 STFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQQTTPIL 212
           ++++ YD + VISA   +EKQ L DL  +LF   + L+ AA+ K+  + E YY +T   L
Sbjct: 167 ASYLRYDLNTVISAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSL 226

Query: 213 QEVMDRM 215
             V+ ++
Sbjct: 227 NNVLAKL 229

BLAST of MELO3C018131T2 vs. Swiss-Prot
Match: PSBQ_ORYSI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_025465 PE=1 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 4.0e-12
Identity = 53/173 (30.64%), Postives = 87/173 (50.29%), Query Frame = 1

Query: 47  TRRLALTSLVSVALFGNASPE--IASANEYWLDGPLPVPS--VDNNIANEQTGTRSF-LK 106
           T R A+  LV+  + G A  +  +A A +    GP P PS  +   + ++Q       L+
Sbjct: 44  TGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLR 103

Query: 107 TGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISA 166
              Y+  +       R K+ A D++ +  LI K    +VR  LRL+++++ YD   VI++
Sbjct: 104 ERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINS 163

Query: 167 AADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRM 215
              DEK+ L DL  +LF   + L++AAK K+  E E YY  T   L +V+ ++
Sbjct: 164 KPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKL 216

BLAST of MELO3C018131T2 vs. Swiss-Prot
Match: PSBQ_ORYSJ (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0544800 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.0e-12
Identity = 53/173 (30.64%), Postives = 87/173 (50.29%), Query Frame = 1

Query: 47  TRRLALTSLVSVALFGNASPE--IASANEYWLDGPLPVPS--VDNNIANEQTGTRSF-LK 106
           T R A+  LV+  + G A  +  +A A +    GP P PS  +   + ++Q       L+
Sbjct: 44  TGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLR 103

Query: 107 TGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISA 166
              Y+  +       R K+ A D++ +  LI K    +VR  LRL+++++ YD   VI++
Sbjct: 104 ERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINS 163

Query: 167 AADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRM 215
              DEK+ L DL  +LF   + L++AAK K+  E E YY  T   L +V+ ++
Sbjct: 164 KPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKL 216

BLAST of MELO3C018131T2 vs. TrEMBL
Match: A0A0A0L7N1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G414060 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 4.3e-114
Identity = 212/215 (98.60%), Postives = 214/215 (99.53%), Query Frame = 1

Query: 1   MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60
           MARLANLNGKFSAIPNLPKLQNIHK+LKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL
Sbjct: 1   MARLANLNGKFSAIPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60

Query: 61  FGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRKYRLKK 120
           FGNASPEIASANEYWLDGPLPVPSVDNNI NEQTGTRSFLKTGIYIANIGTKGRKYRLKK
Sbjct: 61  FGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFLKTGIYIANIGTKGRKYRLKK 120

Query: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN 180
           YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN
Sbjct: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN 180

Query: 181 FEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           FEKLE+AAKQKNLSETESYYQQTTPILQEVMDRMA
Sbjct: 181 FEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 215

BLAST of MELO3C018131T2 vs. TrEMBL
Match: W9QQM8_9ROSA (Oxygen-evolving enhancer protein 3-1 OS=Morus notabilis GN=L484_021171 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.1e-69
Identity = 143/224 (63.84%), Postives = 167/224 (74.55%), Query Frame = 1

Query: 1   MARLANLNGKFSAIPN---LPKLQNIHKKLKITGFLKKQTD---VSSHQISLTRRLALTS 60
           MARLANLNG    +     LP L+   K+  I GF  K+ D    S H +  TRR     
Sbjct: 1   MARLANLNGISETLAGALRLPSLRRTQKRANIVGFQGKKKDDHSQSEHNVQTTRRKLALG 60

Query: 61  LVSVALFGNAS---PEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIGT 120
           L S+AL GN +     +A  N +W+DGPLPVP+VDNNIANE+TGTRSFLK GIY+A+IGT
Sbjct: 61  LASIALVGNTTCNGVSLAEDNGFWIDGPLPVPTVDNNIANEKTGTRSFLKKGIYMADIGT 120

Query: 121 KGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLV 180
           K RKYRL+K AFDLLA+ DLIGKDTLNYV+KYLRLKSTFMYYDFDKVI+AA  D+KQPL 
Sbjct: 121 KNRKYRLRKCAFDLLALEDLIGKDTLNYVQKYLRLKSTFMYYDFDKVITAATVDDKQPLT 180

Query: 181 DLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 216
            LANRLFD+FEKLE A KQ+NL ETE++Y+ T  ILQEVMDRMA
Sbjct: 181 HLANRLFDSFEKLEGATKQRNLPETETFYKDTKVILQEVMDRMA 224

BLAST of MELO3C018131T2 vs. TrEMBL
Match: A0A061FDQ5_THECC (PsbQ-like 1 OS=Theobroma cacao GN=TCM_031120 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 6.1e-68
Identity = 144/221 (65.16%), Postives = 167/221 (75.57%), Query Frame = 1

Query: 1   MARLANLNG---KFSAIPNLPKLQNIHKKLKITGFLKKQT-DVSSHQISLTRRLALTSLV 60
           M  LANLNG      AIP LP +Q   K  KI GFL K T D+    + +TRR+AL SL 
Sbjct: 1   MVHLANLNGITETLPAIPKLPSIQRSRKTAKIIGFLGKNTEDLREQPLQMTRRMAL-SLA 60

Query: 61  SVALFGNASPEIASA--NEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGR 120
           S+AL G +S  I+ A  N YW+   LPVPSV+NNIANE+TGTRSF+K G+Y+AN+ TK R
Sbjct: 61  SIALVGTSSNSISLAEDNGYWITDLLPVPSVENNIANEKTGTRSFVKKGLYVANLNTKNR 120

Query: 121 KYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLA 180
            YRLKKYAFDLLAMADLIG  TL+YV+KYLRLKST MYYDFDK+ISAA  D+KQPL  LA
Sbjct: 121 MYRLKKYAFDLLAMADLIGPGTLSYVKKYLRLKSTVMYYDFDKIISAAPVDDKQPLTTLA 180

Query: 181 NRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           NRLFD+FEKLE+AAK +NL +TES YQ T  ILQEVMDRMA
Sbjct: 181 NRLFDSFEKLEDAAKTRNLPQTESCYQNTKVILQEVMDRMA 220

BLAST of MELO3C018131T2 vs. TrEMBL
Match: V4TXQ4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009429mg PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 8.8e-67
Identity = 142/221 (64.25%), Postives = 161/221 (72.85%), Query Frame = 1

Query: 1   MARLANLNG---KFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQISLTRRLALTSLVS 60
           MA LANLNG      A+PNLPK Q   K+ KI G L  + +    Q  +TRR++L  L S
Sbjct: 1   MAHLANLNGVSETLPAVPNLPKFQKFQKRAKIIGLLGHKAENFQDQAQITRRVSL-GLAS 60

Query: 61  VALFGNASPE---IASANEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGR 120
           +AL G+ S     +A  N  W+ GPLPVP V NNIA+E+TGTRSFLK  IYIANIGTKGR
Sbjct: 61  LALIGSTSSNGASLAEDNGLWVTGPLPVPPVYNNIASEKTGTRSFLKKAIYIANIGTKGR 120

Query: 121 KYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLA 180
            +RLK+YAFDLLAMADLIG DTLNYVRKYLRLKSTFMYYDFD VISAAA  +KQPL DLA
Sbjct: 121 IHRLKRYAFDLLAMADLIGPDTLNYVRKYLRLKSTFMYYDFDNVISAAAPSDKQPLTDLA 180

Query: 181 NRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           NRLFD+FEKLE A   KN  +T+S Y  T  IL EVMDRMA
Sbjct: 181 NRLFDSFEKLEVAVSTKNFPQTQSTYADTAVILHEVMDRMA 220

BLAST of MELO3C018131T2 vs. TrEMBL
Match: A0A068UC11_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021098001 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.5e-66
Identity = 142/221 (64.25%), Postives = 163/221 (73.76%), Query Frame = 1

Query: 1   MARLANLNG---KFSAIPNLPKLQNIHKKLKITGFLKKQTD-VSSHQISLTRRLALTSLV 60
           MAR  NL+G    FS IP L +++NI KK     FL K+TD +    +  TRRLAL  L 
Sbjct: 1   MARATNLSGIFEAFSIIPKLHEVENIRKKATDVNFLSKRTDELQEDTLQTTRRLAL-GLA 60

Query: 61  SVALFGN---ASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIGTKG 120
           S+A+F     A   +A  N YWL GP+PVPS  N I NE TGTRSFLK GIYIANIGTKG
Sbjct: 61  SLAIFSTSRAAGISLAEDNGYWLTGPIPVPSAKNKITNEDTGTRSFLKRGIYIANIGTKG 120

Query: 121 RKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDL 180
           R +RLKKYAFDLLA+ DLIG DT NYV KYLRLKSTFMY+DFD+VI+AAAD EKQPL DL
Sbjct: 121 RMHRLKKYAFDLLALEDLIGPDTFNYVLKYLRLKSTFMYFDFDEVITAAADGEKQPLTDL 180

Query: 181 ANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRM 215
           ANRLFD+ EKLE+AAK +NL  T+S YQ TT ILQEVM+RM
Sbjct: 181 ANRLFDSVEKLEDAAKNQNLPRTQSLYQDTTVILQEVMNRM 220

BLAST of MELO3C018131T2 vs. TAIR10
Match: AT3G01440.1 (AT3G01440.1 PsbQ-like 1)

HSP 1 Score: 252.3 bits (643), Expect = 2.7e-67
Identity = 128/220 (58.18%), Postives = 161/220 (73.18%), Query Frame = 1

Query: 1   MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSH--QISLTRRLALTSLVSV 60
           MA   +LN   + +P+LPKL    K  K +GF  ++T+       + +TRR+ L   VS+
Sbjct: 1   MAHFIDLNSLTNTLPSLPKLPESRKTGKSSGFACRRTEEFQEPDSVQITRRMTLGFAVSI 60

Query: 61  AL---FGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRK 120
            L    G  +  +A  N +W+DGPLP+P + NNI NE+TGTR+F+K G+Y+A+IGTKGR 
Sbjct: 61  GLTGILGENNVSLAQDNGFWIDGPLPIPPIYNNIVNEKTGTRTFIKKGVYVADIGTKGRM 120

Query: 121 YRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLAN 180
           YR+KK AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFD +ISAAA ++KQPL DLAN
Sbjct: 121 YRVKKNAFDLLAMEDLIGPDTLNYVKKYLRLKSTFLFYDFDNLISAAASEDKQPLTDLAN 180

Query: 181 RLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           RLFDNFEKLE+AAK KNL+ETES Y+ T  +LQEVM RMA
Sbjct: 181 RLFDNFEKLEDAAKTKNLAETESCYKDTKFLLQEVMTRMA 220

BLAST of MELO3C018131T2 vs. TAIR10
Match: AT4G21280.2 (AT4G21280.2 photosystem II subunit QA)

HSP 1 Score: 84.3 bits (207), Expect = 9.8e-17
Identity = 64/223 (28.70%), Postives = 107/223 (47.98%), Query Frame = 1

Query: 1   MARLANLNGKFSAIPNLPKLQNIHKKLKITGFL----KKQTDVSSHQISLTRRLALTSLV 60
           MA +  L+G   A+       N   +L  +G +    + +  V + Q   T R ++  LV
Sbjct: 1   MASMGGLHGASPAVLEGSLKINGSSRLNGSGRVAVAQRSRLVVRAQQSEETSRRSVIGLV 60

Query: 61  SVALFGNASPEIASANEYWLD-GPLPVPSVDNNIANEQTG-TRSF---LKTGIYIANIGT 120
           +  L G +  +   A+   +  GP P PS       + +   R F   LK   Y+  +  
Sbjct: 61  AAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQARDFALALKDRFYLQPLPP 120

Query: 121 KGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLV 180
                R K+ A D++ +  LI +    YV+  LR K++++ YD + +IS+   DEK+ L 
Sbjct: 121 TEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIISSKPKDEKKSLK 180

Query: 181 DLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRM 215
           DL  +LFD  + L+ AAK+K+ S+ E YY +T   L EV+ ++
Sbjct: 181 DLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 223

BLAST of MELO3C018131T2 vs. TAIR10
Match: AT4G05180.1 (AT4G05180.1 photosystem II subunit Q-2)

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-13
Identity = 56/187 (29.95%), Postives = 89/187 (47.59%), Query Frame = 1

Query: 33  LKKQTDVSSHQISLTRRLALTSLVSVALFGNASPE--IASANEYWLDGPLPVPSVDNNIA 92
           ++ Q +VS  + S   R ++  LV+  L G +  +   A A    + GP P+PS      
Sbjct: 47  IRAQQNVSVPESS---RRSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGP-PLPSGGLPGT 106

Query: 93  NEQTGTRSF---LKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLK 152
           +     R F   LK   YI  +       R K  A +++ +   I K    YV+  LRL+
Sbjct: 107 DNSDQARDFSLALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLR 166

Query: 153 STFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQQTTPIL 212
           ++++ YD + VISA   +EKQ L DL  +LF   + L+ AA+ K+  + E YY +T   L
Sbjct: 167 ASYLRYDLNTVISAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSL 226

Query: 213 QEVMDRM 215
             V+ ++
Sbjct: 227 NNVLAKL 229

BLAST of MELO3C018131T2 vs. NCBI nr
Match: gi|659109145|ref|XP_008454569.1| (PREDICTED: psbQ-like protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 423.3 bits (1087), Expect = 2.5e-115
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1

Query: 1   MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60
           MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL
Sbjct: 1   MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60

Query: 61  FGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRKYRLKK 120
           FGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRKYRLKK
Sbjct: 61  FGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRKYRLKK 120

Query: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN 180
           YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN
Sbjct: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN 180

Query: 181 FEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           FEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA
Sbjct: 181 FEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 215

BLAST of MELO3C018131T2 vs. NCBI nr
Match: gi|449468510|ref|XP_004151964.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucumis sativus])

HSP 1 Score: 418.7 bits (1075), Expect = 6.2e-114
Identity = 212/215 (98.60%), Postives = 214/215 (99.53%), Query Frame = 1

Query: 1   MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60
           MARLANLNGKFSAIPNLPKLQNIHK+LKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL
Sbjct: 1   MARLANLNGKFSAIPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60

Query: 61  FGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRKYRLKK 120
           FGNASPEIASANEYWLDGPLPVPSVDNNI NEQTGTRSFLKTGIYIANIGTKGRKYRLKK
Sbjct: 61  FGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFLKTGIYIANIGTKGRKYRLKK 120

Query: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN 180
           YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN
Sbjct: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN 180

Query: 181 FEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           FEKLE+AAKQKNLSETESYYQQTTPILQEVMDRMA
Sbjct: 181 FEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 215

BLAST of MELO3C018131T2 vs. NCBI nr
Match: gi|645278675|ref|XP_008244339.1| (PREDICTED: psbQ-like protein 2, chloroplastic [Prunus mume])

HSP 1 Score: 283.1 bits (723), Expect = 4.1e-73
Identity = 149/221 (67.42%), Postives = 174/221 (78.73%), Query Frame = 1

Query: 1   MARLANLNG---KFSAIPNLPKLQNIHKKLKITGFL-KKQTDVSSHQISLTRRLALTSLV 60
           MA LANLNG      AIP LP +Q   K++ I GF+ KK+ D+    +  TRRLAL  L 
Sbjct: 1   MAHLANLNGVSETLPAIPRLPGIQWTQKRVSIVGFMGKKKDDLQEQPLHTTRRLAL-GLA 60

Query: 61  SVALFGNA--SPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGR 120
           S+AL GN+     +A  N +W+DGPLPVPS +N IANE+TGTRSFLK G+Y+ANIGTKGR
Sbjct: 61  SIALVGNSCNGVSLAEGNGFWIDGPLPVPSAENKIANEKTGTRSFLKKGLYMANIGTKGR 120

Query: 121 KYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLA 180
           K+RLKKYAFDLLAMADLI +DTLNYVR++LRLKSTFMY+DFD+VISAA  DEKQPL DLA
Sbjct: 121 KFRLKKYAFDLLAMADLIAQDTLNYVRRFLRLKSTFMYFDFDQVISAAPVDEKQPLTDLA 180

Query: 181 NRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           NRLFD  EKL+ A KQ+NLSETESYY+ TT ILQEVMDRMA
Sbjct: 181 NRLFDTVEKLDGAVKQRNLSETESYYKDTTVILQEVMDRMA 220

BLAST of MELO3C018131T2 vs. NCBI nr
Match: gi|470116327|ref|XP_004294334.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Fragaria vesca subsp. vesca])

HSP 1 Score: 278.1 bits (710), Expect = 1.3e-71
Identity = 150/223 (67.26%), Postives = 172/223 (77.13%), Query Frame = 1

Query: 1   MARLANLNGKFSAIP---NLPKLQNIHKKLKITGFL--KKQTDVSSHQISLTRRLALTSL 60
           MA+LANLNG    +P    LP +Q   K++ I G L  KK  DV    +  TRRLAL  L
Sbjct: 1   MAQLANLNGISETLPVLHRLPSIQKTRKRVSIIGCLGKKKDHDVLEQPLQTTRRLAL-GL 60

Query: 61  VSVALFGNASPEIASA---NEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIGTK 120
            S+AL GN+S E A A   N +WLDGPLPVPS DN IANE+TGTRSFLK  +Y+A+IGTK
Sbjct: 61  ASIALVGNSSSEAALAEGNNGFWLDGPLPVPSADNKIANEETGTRSFLKNHLYMADIGTK 120

Query: 121 GRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVD 180
           GRKYRLKKYAFDLLAMADLI +DTLNYV+KYLRLKSTFMY+DFDKVI+AA   EKQPL D
Sbjct: 121 GRKYRLKKYAFDLLAMADLIAQDTLNYVQKYLRLKSTFMYFDFDKVITAAPVTEKQPLTD 180

Query: 181 LANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           LANRLF+  EKL+ A +Q+NLSETE+YYQ TT ILQEVMDRMA
Sbjct: 181 LANRLFNTVEKLDGAVRQRNLSETETYYQDTTVILQEVMDRMA 222

BLAST of MELO3C018131T2 vs. NCBI nr
Match: gi|1009110877|ref|XP_015898087.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 275.8 bits (704), Expect = 6.5e-71
Identity = 149/222 (67.12%), Postives = 175/222 (78.83%), Query Frame = 1

Query: 1   MARLANLNGKFSAIPNLPKLQNIH---KKLKITGFLKKQTDVSSHQISL--TRRLALTSL 60
           MARLAN N     +P + KL +I    K++K  GFL K+TD  S Q SL  TRRLAL  L
Sbjct: 1   MARLANFNRVSETLPGIAKLPSIRRTQKRVKKIGFLCKKTDDDSQQHSLQTTRRLAL-GL 60

Query: 61  VSVALFGNA--SPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIGTKG 120
            S+ L GN+     +A  N +WLDGPLPVPSV NNIANE+TGTRSFLK G+YIA+I TKG
Sbjct: 61  ASITLVGNSCNGVSLAEENRFWLDGPLPVPSVYNNIANEKTGTRSFLKKGVYIADIPTKG 120

Query: 121 RKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDL 180
           R YRL+KYAFDLLAM DLIG+DTLNYV+KYLRLKSTFMYYDFDKVISAA  D+KQPL +L
Sbjct: 121 RMYRLRKYAFDLLAMEDLIGQDTLNYVQKYLRLKSTFMYYDFDKVISAAPVDDKQPLTNL 180

Query: 181 ANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           ANRLFDN EKL++AAKQ+NL++TE++Y+ T  ILQEVMDRMA
Sbjct: 181 ANRLFDNVEKLDDAAKQRNLTQTETFYKDTKVILQEVMDRMA 221

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PNSL3_ARATH4.8e-6658.18Photosynthetic NDH subunit of lumenal location 3, chloroplastic OS=Arabidopsis t... [more]
PSBQ1_ARATH1.7e-1528.70Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=P... [more]
PSBQ2_ARATH1.8e-1229.95Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=P... [more]
PSBQ_ORYSI4.0e-1230.64Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica ... [more]
PSBQ_ORYSJ4.0e-1230.64Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonic... [more]
Match NameE-valueIdentityDescription
A0A0A0L7N1_CUCSA4.3e-11498.60Uncharacterized protein OS=Cucumis sativus GN=Csa_3G414060 PE=4 SV=1[more]
W9QQM8_9ROSA1.1e-6963.84Oxygen-evolving enhancer protein 3-1 OS=Morus notabilis GN=L484_021171 PE=4 SV=1[more]
A0A061FDQ5_THECC6.1e-6865.16PsbQ-like 1 OS=Theobroma cacao GN=TCM_031120 PE=4 SV=1[more]
V4TXQ4_9ROSI8.8e-6764.25Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009429mg PE=4 SV=1[more]
A0A068UC11_COFCA1.5e-6664.25Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021098001 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G01440.12.7e-6758.18 PsbQ-like 1[more]
AT4G21280.29.8e-1728.70 photosystem II subunit QA[more]
AT4G05180.11.0e-1329.95 photosystem II subunit Q-2[more]
Match NameE-valueIdentityDescription
gi|659109145|ref|XP_008454569.1|2.5e-115100.00PREDICTED: psbQ-like protein 2, chloroplastic [Cucumis melo][more]
gi|449468510|ref|XP_004151964.1|6.2e-11498.60PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucu... [more]
gi|645278675|ref|XP_008244339.1|4.1e-7367.42PREDICTED: psbQ-like protein 2, chloroplastic [Prunus mume][more]
gi|470116327|ref|XP_004294334.1|1.3e-7167.26PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Frag... [more]
gi|1009110877|ref|XP_015898087.1|6.5e-7167.12PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic-like ... [more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR008797PSII_PsbQ
IPR023222PsbQ-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0009523photosystem II
GO:0009654photosystem II oxygen evolving complex
GO:0019898extrinsic component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015979 photosynthesis
cellular_component GO:0019898 extrinsic component of membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0009654 photosystem II oxygen evolving complex
cellular_component GO:0009534 chloroplast thylakoid
molecular_function GO:0005509 calcium ion binding

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C018131MELO3C018131gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C018131T2MELO3C018131T2-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C018131T2.cds3MELO3C018131T2.cds3CDS
MELO3C018131T2.cds2MELO3C018131T2.cds2CDS
MELO3C018131T2.cds1MELO3C018131T2.cds1CDS


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008797Oxygen-evolving enhancer protein 3PFAMPF05757PsbQcoord: 36..215
score: 5.3
IPR023222PsbQ-like domainGENE3DG3DSA:1.20.120.290coord: 75..215
score: 1.3
IPR023222PsbQ-like domainunknownSSF101112Oxygen-evolving enhancer protein 3,coord: 105..215
score: 7.85
NoneNo IPR availablePANTHERPTHR33399FAMILY NOT NAMEDcoord: 1..215
score: 8.2E
NoneNo IPR availablePANTHERPTHR33399:SF2PSBQ-LIKE PROTEIN 2, CHLOROPLASTICcoord: 1..215
score: 8.2E