MELO3C018131T2 (mRNA) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.TCTATATATTATATTAATATTTATAACATTATTTTATTTTTGAACCTGATGGGAAGAAATTTAACTTTTTATAACAAAATTACCAGAATAACCTTGGTGAGGATATCCTTTGGGTGGACAATGAAGAAACTGAAAAAGGGAAGCGGATAACTGAAATTAGAAGCTCTGCTTCTTCCTTTTGCTAATTTCCTCCGTTTCTCATCTTAGTCTTCCCATCAAATGGCTCGTCTTGCAAATTTAAACGGGAAATTCTCCGCCATTCCCAATCTCCCAAAGCTTCAAAACATTCATAAGAAACTCAAAATTACTGGGTTTCTCAAGAAACAAACGGATGTTTCTTCTCATCAAATCTCATTGACAAGAAGATTGGCTTTAACCAGCCTTGTCTCTGTTGCTCTCTTTGGCAATGCATCCCCCGAGATTGCTTCCGCTAACGAGTATTGGCTTGATGGCCCTTTGCCTGTCCCTTCTGTTGACAACAGTAAGCTTTCTCATTGAACAAGTTTGAAATGTTCGTTTGTGTTTTTGTTTTCCTTATCTGGGTGTACCTCCAAATTGGAAAATTCGAAATTGTTTGGTTAGTTTGACAGTAGAGACTAGAATTTGCTATGAATTATTTGTTACAGACATTGCGAATGAGCAAACAGGGACACGATCGTTTCTGAAGACAGGGATATACATAGCTAACATAGGAACAAAAGGAAGAAAATACAGGTTGAAAAAATATGCATTTGATCTTCTAGCTATGGCAGATTTGATTGGGAAAGATACTTTGAATTATGTCAGAAAGTATCTTCGACTCAAATCAACCTTCATGTACTATGATTTTGACAAAGTTATCTCGGCAGCAGCAGACGATGAGAAGCAGCCTCTTGTTGATTTAGCGAACAGATTATTTGACAATTTCGAAAAGGTAAAATGCAGATAAGTTTTACAAGTTTCTTCAAATATATGCAAATTTTCAAGCTGAAGTACCTCCTTTTGTACTTTGCAGCTTGAAAATGCAGCAAAGCAAAAGAATCTGAGTGAAACTGAATCCTACTACCAACAAACAACACCGATACTTCAAGAAGTCATGGATAGAATGGCATAAATTGAACAAATTAATTGATCAGAAGCGTTTGGAGGAACTGCTTGCTTTTCCATAATTCTTCTGTGGTGCTTGTTCACAATTAGTTTCCATTTTTCCCATGTATTTCAATGCGGCTTAAAGATGCAAAATCAAGACAAACAGTGCAGTGAGTTTCACAAATTATAGTTCAACTATCTGGATTTTGTCTTATATGGAAATGAAGACAGATAATTTGCAGCATGCTTGGCACAATTAAAGAGGCTTAATTGTAAATAAAAGTGAAGGGGAACAAAAGAATCTTACTTTCATTGATACAATCAGATCTCTTTTGCTATACATAACTAAGCCTAAGTCAGAATCATTCTCATATTTCATTATCAAATAGTTGATTTGCCAATGTATAGGCAATGTTCGAGCATAAATCTTAAGGTCGTGTATTGGTTAGACGCCGAGGAGTACCGATCTCGCAAGCATTGACCCGGGCAGCAAAGCGAAGCGAGCAGAGTGATTCATTGGCCGAGGAGGAATCAGGAGAGATATTTACAAACATCAACGTCTTTGAATCTCCACCGAGACACGGCTG TCTATATATTATATTAATATTTATAACATTATTTTATTTTTGAACCTGATGGGAAGAAATTTAACTTTTTATAACAAAATTACCAGAATAACCTTGGTGAGGATATCCTTTGGGTGGACAATGAAGAAACTGAAAAAGGGAAGCGGATAACTGAAATTAGAAGCTCTGCTTCTTCCTTTTGCTAATTTCCTCCGTTTCTCATCTTAGTCTTCCCATCAAATGGCTCGTCTTGCAAATTTAAACGGGAAATTCTCCGCCATTCCCAATCTCCCAAAGCTTCAAAACATTCATAAGAAACTCAAAATTACTGGGTTTCTCAAGAAACAAACGGATGTTTCTTCTCATCAAATCTCATTGACAAGAAGATTGGCTTTAACCAGCCTTGTCTCTGTTGCTCTCTTTGGCAATGCATCCCCCGAGATTGCTTCCGCTAACGAGTATTGGCTTGATGGCCCTTTGCCTGTCCCTTCTGTTGACAACAACATTGCGAATGAGCAAACAGGGACACGATCGTTTCTGAAGACAGGGATATACATAGCTAACATAGGAACAAAAGGAAGAAAATACAGGTTGAAAAAATATGCATTTGATCTTCTAGCTATGGCAGATTTGATTGGGAAAGATACTTTGAATTATGTCAGAAAGTATCTTCGACTCAAATCAACCTTCATGTACTATGATTTTGACAAAGTTATCTCGGCAGCAGCAGACGATGAGAAGCAGCCTCTTGTTGATTTAGCGAACAGATTATTTGACAATTTCGAAAAGCTTGAAAATGCAGCAAAGCAAAAGAATCTGAGTGAAACTGAATCCTACTACCAACAAACAACACCGATACTTCAAGAAGTCATGGATAGAATGGCATAAATTGAACAAATTAATTGATCAGAAGCGTTTGGAGGAACTGCTTGCTTTTCCATAATTCTTCTGTGGTGCTTGTTCACAATTAGTTTCCATTTTTCCCATGTATTTCAATGCGGCTTAAAGATGCAAAATCAAGACAAACAGTGCAGTGAGTTTCACAAATTATAGTTCAACTATCTGGATTTTGTCTTATATGGAAATGAAGACAGATAATTTGCAGCATGCTTGGCACAATTAAAGAGGCTTAATTGTAAATAAAAGTGAAGGGGAACAAAAGAATCTTACTTTCATTGATACAATCAGATCTCTTTTGCTATACATAACTAAGCCTAAGTCAGAATCATTCTCATATTTCATTATCAAATAGTTGATTTGCCAATGTATAGGCAATGTTCGAGCATAAATCTTAAGGTCGTGTATTGGTTAGACGCCGAGGAGTACCGATCTCGCAAGCATTGACCCGGGCAGCAAAGCGAAGCGAGCAGAGTGATTCATTGGCCGAGGAGGAATCAGGAGAGATATTTACAAACATCAACGTCTTTGAATCTCCACCGAGACACGGCTG ATGGCTCGTCTTGCAAATTTAAACGGGAAATTCTCCGCCATTCCCAATCTCCCAAAGCTTCAAAACATTCATAAGAAACTCAAAATTACTGGGTTTCTCAAGAAACAAACGGATGTTTCTTCTCATCAAATCTCATTGACAAGAAGATTGGCTTTAACCAGCCTTGTCTCTGTTGCTCTCTTTGGCAATGCATCCCCCGAGATTGCTTCCGCTAACGAGTATTGGCTTGATGGCCCTTTGCCTGTCCCTTCTGTTGACAACAACATTGCGAATGAGCAAACAGGGACACGATCGTTTCTGAAGACAGGGATATACATAGCTAACATAGGAACAAAAGGAAGAAAATACAGGTTGAAAAAATATGCATTTGATCTTCTAGCTATGGCAGATTTGATTGGGAAAGATACTTTGAATTATGTCAGAAAGTATCTTCGACTCAAATCAACCTTCATGTACTATGATTTTGACAAAGTTATCTCGGCAGCAGCAGACGATGAGAAGCAGCCTCTTGTTGATTTAGCGAACAGATTATTTGACAATTTCGAAAAGCTTGAAAATGCAGCAAAGCAAAAGAATCTGAGTGAAACTGAATCCTACTACCAACAAACAACACCGATACTTCAAGAAGTCATGGATAGAATGGCATAA MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA*
BLAST of MELO3C018131T2 vs. Swiss-Prot
Match: PNSL3_ARATH (Photosynthetic NDH subunit of lumenal location 3, chloroplastic OS=Arabidopsis thaliana GN=PNSL3 PE=1 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 4.8e-66 Identity = 128/220 (58.18%), Postives = 161/220 (73.18%), Query Frame = 1
BLAST of MELO3C018131T2 vs. Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3) HSP 1 Score: 84.3 bits (207), Expect = 1.7e-15 Identity = 64/223 (28.70%), Postives = 107/223 (47.98%), Query Frame = 1
BLAST of MELO3C018131T2 vs. Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2) HSP 1 Score: 74.3 bits (181), Expect = 1.8e-12 Identity = 56/187 (29.95%), Postives = 89/187 (47.59%), Query Frame = 1
BLAST of MELO3C018131T2 vs. Swiss-Prot
Match: PSBQ_ORYSI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_025465 PE=1 SV=2) HSP 1 Score: 73.2 bits (178), Expect = 4.0e-12 Identity = 53/173 (30.64%), Postives = 87/173 (50.29%), Query Frame = 1
BLAST of MELO3C018131T2 vs. Swiss-Prot
Match: PSBQ_ORYSJ (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0544800 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 4.0e-12 Identity = 53/173 (30.64%), Postives = 87/173 (50.29%), Query Frame = 1
BLAST of MELO3C018131T2 vs. TrEMBL
Match: A0A0A0L7N1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G414060 PE=4 SV=1) HSP 1 Score: 418.7 bits (1075), Expect = 4.3e-114 Identity = 212/215 (98.60%), Postives = 214/215 (99.53%), Query Frame = 1
BLAST of MELO3C018131T2 vs. TrEMBL
Match: W9QQM8_9ROSA (Oxygen-evolving enhancer protein 3-1 OS=Morus notabilis GN=L484_021171 PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 1.1e-69 Identity = 143/224 (63.84%), Postives = 167/224 (74.55%), Query Frame = 1
BLAST of MELO3C018131T2 vs. TrEMBL
Match: A0A061FDQ5_THECC (PsbQ-like 1 OS=Theobroma cacao GN=TCM_031120 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 6.1e-68 Identity = 144/221 (65.16%), Postives = 167/221 (75.57%), Query Frame = 1
BLAST of MELO3C018131T2 vs. TrEMBL
Match: V4TXQ4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009429mg PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 8.8e-67 Identity = 142/221 (64.25%), Postives = 161/221 (72.85%), Query Frame = 1
BLAST of MELO3C018131T2 vs. TrEMBL
Match: A0A068UC11_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021098001 PE=4 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 1.5e-66 Identity = 142/221 (64.25%), Postives = 163/221 (73.76%), Query Frame = 1
BLAST of MELO3C018131T2 vs. TAIR10
Match: AT3G01440.1 (AT3G01440.1 PsbQ-like 1) HSP 1 Score: 252.3 bits (643), Expect = 2.7e-67 Identity = 128/220 (58.18%), Postives = 161/220 (73.18%), Query Frame = 1
BLAST of MELO3C018131T2 vs. TAIR10
Match: AT4G21280.2 (AT4G21280.2 photosystem II subunit QA) HSP 1 Score: 84.3 bits (207), Expect = 9.8e-17 Identity = 64/223 (28.70%), Postives = 107/223 (47.98%), Query Frame = 1
BLAST of MELO3C018131T2 vs. TAIR10
Match: AT4G05180.1 (AT4G05180.1 photosystem II subunit Q-2) HSP 1 Score: 74.3 bits (181), Expect = 1.0e-13 Identity = 56/187 (29.95%), Postives = 89/187 (47.59%), Query Frame = 1
BLAST of MELO3C018131T2 vs. NCBI nr
Match: gi|659109145|ref|XP_008454569.1| (PREDICTED: psbQ-like protein 2, chloroplastic [Cucumis melo]) HSP 1 Score: 423.3 bits (1087), Expect = 2.5e-115 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1
BLAST of MELO3C018131T2 vs. NCBI nr
Match: gi|449468510|ref|XP_004151964.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucumis sativus]) HSP 1 Score: 418.7 bits (1075), Expect = 6.2e-114 Identity = 212/215 (98.60%), Postives = 214/215 (99.53%), Query Frame = 1
BLAST of MELO3C018131T2 vs. NCBI nr
Match: gi|645278675|ref|XP_008244339.1| (PREDICTED: psbQ-like protein 2, chloroplastic [Prunus mume]) HSP 1 Score: 283.1 bits (723), Expect = 4.1e-73 Identity = 149/221 (67.42%), Postives = 174/221 (78.73%), Query Frame = 1
BLAST of MELO3C018131T2 vs. NCBI nr
Match: gi|470116327|ref|XP_004294334.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Fragaria vesca subsp. vesca]) HSP 1 Score: 278.1 bits (710), Expect = 1.3e-71 Identity = 150/223 (67.26%), Postives = 172/223 (77.13%), Query Frame = 1
BLAST of MELO3C018131T2 vs. NCBI nr
Match: gi|1009110877|ref|XP_015898087.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [Ziziphus jujuba]) HSP 1 Score: 275.8 bits (704), Expect = 6.5e-71 Identity = 149/222 (67.12%), Postives = 175/222 (78.83%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
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