MELO3C017073T3 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C017073T3
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Tetratricopeptide repeat (TPR)-like superfamily protein
Location	chr7 : 100785 .. 102015 (-)
Sequence length	534

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGTTAGAAACTGTGTTGTTGGTACATGTACTTCATACTTGAGTTAATGATCACAAATATCTTGATGTTCCTAAACTTGGTTGTGTTCTACATTTCTTACTCTTTTCTTTACAGTTATACTGGAATAGGTGCGAAAAGCAATTGGCGAGACAGGCTTTTGATTATGCCAGAAGTATAGATCCTTCTCTAGCATTACCCTGGGCTGGCATGTCGGCTGATTTGAACGTTAGGTGATATATAAATGTTCTTTTTGAAGTGTTTTCCATCATGAAGGAAATGTTTGTTGTGTATATTTTCCTTTGGGAGGGGGGGGGGGGGGGGGGGGGGTTAAGAACGTTGGACTGGGTGAATTTACTGAGTAGCATATCACTCGTTTACCTAAGAGATTTTTACTTGACAGGGAGTCAACATCGGAAGAAGCATTCGAGAGCTGTTTAAGAGCTGCACAAATACTTCCTGTAATTTTTCTGTCTTTAAGATTATTGAAATAGTAGCCCTGAAATCAATCCGCAGAAAGGATTTGCTCCAATTGATGCTATTTTAAGATAAATGAGATCAAGTATTCTGTTTTGTTATTAATTGTTTCATTTTAAAAGCTTGGATACGTCCCAGGATTTTTCTTTTTATTCATTTCCTTCTAAAAGAAAAAGAAAATGAAAAAGAAAGGAGGAAAATACTATTCTTTCTAACATTTTTTGTTGTCGTCTTTGTTTTTTTGTCTTGTTTTGACTGTTGTGCAGCTGTTGGCTCTTCTGTTTGTCTACAAAAAAACATTCTAAAAGGTAAAAACAATATTCTTGTAGGTGGCGGAATTCCAAATTGGTCTTGCCAAGCTTTCTCTGCAGGCGGGCCATCTTTCATCTCCACAGGTCTGATTGTTGTCAAGTTATGATGGAATTCTACTTGATAACCTTTTCTTTTCTTCAGAATGTTCTACGGATTTTTCTTTTATGTTCAGGTGTTTGGAGCTATACGTCAGGCTGTTCAACTTGCACCTTGTTACCCTGAATCCTATAATCTAAGTGGACTAGCTTTTGAGGCACAATTAGATTATCAATCTGCTGTTGCTGCTTATCGTTTAGCACACCTCACAATTAGCCACTTTTCAGATAGAGTTCCAAGGTCTCATGTCAGAGATATATCGATCAACTTAGCCAGATCACTCTGCATGGTGAAGTTTACTAAATTTTTTTGCACCTCTACATCTGTGTGCCCCATGAAACCTTGA

mRNA sequence

ATGTGGTTAGAAACTGTGTTGTTGTTATACTGGAATAGGTGCGAAAAGCAATTGGCGAGACAGGCTTTTGATTATGCCAGAAGTATAGATCCTTCTCTAGCATTACCCTGGGCTGGCATGTCGGCTGATTTGAACGTTAGGGAGTCAACATCGGAAGAAGCATTCGAGAGCTGTTTAAGAGCTGCACAAATACTTCCTGTGGCGGAATTCCAAATTGGTCTTGCCAAGCTTTCTCTGCAGGCGGGCCATCTTTCATCTCCACAGGTGTTTGGAGCTATACGTCAGGCTGTTCAACTTGCACCTTGTTACCCTGAATCCTATAATCTAAGTGGACTAGCTTTTGAGGCACAATTAGATTATCAATCTGCTGTTGCTGCTTATCGTTTAGCACACCTCACAATTAGCCACTTTTCAGATAGAGTTCCAAGGTCTCATGTCAGAGATATATCGATCAACTTAGCCAGATCACTCTGCATGGTGAAGTTTACTAAATTTTTTTGCACCTCTACATCTGTGTGCCCCATGAAACCTTGA

Coding sequence (CDS)

ATGTGGTTAGAAACTGTGTTGTTGTTATACTGGAATAGGTGCGAAAAGCAATTGGCGAGACAGGCTTTTGATTATGCCAGAAGTATAGATCCTTCTCTAGCATTACCCTGGGCTGGCATGTCGGCTGATTTGAACGTTAGGGAGTCAACATCGGAAGAAGCATTCGAGAGCTGTTTAAGAGCTGCACAAATACTTCCTGTGGCGGAATTCCAAATTGGTCTTGCCAAGCTTTCTCTGCAGGCGGGCCATCTTTCATCTCCACAGGTGTTTGGAGCTATACGTCAGGCTGTTCAACTTGCACCTTGTTACCCTGAATCCTATAATCTAAGTGGACTAGCTTTTGAGGCACAATTAGATTATCAATCTGCTGTTGCTGCTTATCGTTTAGCACACCTCACAATTAGCCACTTTTCAGATAGAGTTCCAAGGTCTCATGTCAGAGATATATCGATCAACTTAGCCAGATCACTCTGCATGGTGAAGTTTACTAAATTTTTTTGCACCTCTACATCTGTGTGCCCCATGAAACCTTGA

Protein sequence

MWLETVLLLYWNRCEKQLARQAFDYARSIDPSLALPWAGMSADLNVRESTSEEAFESCLRAAQILPVAEFQIGLAKLSLQAGHLSSPQVFGAIRQAVQLAPCYPESYNLSGLAFEAQLDYQSAVAAYRLAHLTISHFSDRVPRSHVRDISINLARSLCMVKFTKFFCTSTSVCPMKP*

Homology

[Close]

BLAST of MELO3C017073T3 vs. Swiss-Prot
Match: SKI3_ARATH (Tetratricopeptide repeat protein SKI3 OS=Arabidopsis thaliana GN=SKI3 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.2e-40
Identity = 87/143 (60.84%), Postives = 107/143 (74.83%), Query Frame = 1


Query: 15  EKQLARQAFDYARSIDPSLALPWAGMSADLNVRESTSEEAFESCLRAAQILPVAEFQIGL 74
           E + A+QAFD ARSIDP+LALPWAG SAD   RESTS+EAFESCLRAAQI P+AEFQ+GL
Sbjct: 427 EMKFAKQAFDCARSIDPTLALPWAG-SADTYARESTSDEAFESCLRAAQISPLAEFQVGL 486

Query: 75  AKLSLQAGHLSSPQVFGAIRQAVQLAPCYPESYNLSGLAFEAQLDYQSAVAAYRLAHLTI 134
           A L+L  G++SSPQ+F  I QAVQ +P YPE +NL GL  EA+ +Y +A+A+YRLA   +
Sbjct: 487 AWLALLQGNISSPQIFACIEQAVQRSPYYPEPHNLHGLVCEARHNYHTAIASYRLALAAM 546

Query: 135 SHFSDRVPRSHVRDISINLARSL 158
           S + +   +SH   +SINL RSL
Sbjct: 547 SIYPESSVKSHAGKVSINLVRSL 568

[Close]

BLAST of MELO3C017073T3 vs. TrEMBL
Match: A0A0A0L4Q4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G665130 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.4e-78
Identity = 150/152 (98.68%), Postives = 152/152 (100.00%), Query Frame = 1


Query: 9   LYWNRCEKQLARQAFDYARSIDPSLALPWAGMSADLNVRESTSEEAFESCLRAAQILPVA 68
           LYWNRCEKQLARQAFDYARSIDPSLALPWAGMSADLNVRESTS+EAFESCLRAAQILPVA
Sbjct: 440 LYWNRCEKQLARQAFDYARSIDPSLALPWAGMSADLNVRESTSDEAFESCLRAAQILPVA 499

Query: 69  EFQIGLAKLSLQAGHLSSPQVFGAIRQAVQLAPCYPESYNLSGLAFEAQLDYQSAVAAYR 128
           EFQIGLAKLSLQAGHLSSPQVFGAIRQAVQLAPCYPESYNL+GLAFEAQLDYQSAVAAYR
Sbjct: 500 EFQIGLAKLSLQAGHLSSPQVFGAIRQAVQLAPCYPESYNLNGLAFEAQLDYQSAVAAYR 559

Query: 129 LAHLTISHFSDRVPRSHVRDISINLARSLCMV 161
           LAHLTISHFSDRVPRSHVRDISINLARSLCMV
Sbjct: 560 LAHLTISHFSDRVPRSHVRDISINLARSLCMV 591

[Close]

BLAST of MELO3C017073T3 vs. TrEMBL
Match: A5C333_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042202 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 8.6e-52
Identity = 109/149 (73.15%), Postives = 125/149 (83.89%), Query Frame = 1


Query: 9   LYWNRCEKQLARQAFDYARSIDPSLALPWAGMSADLNVRESTSEEAFESCLRAAQILPVA 68
           LY    EKQLARQAFD ARSIDPSLALPWAGMSAD + R+ T++EA+ESCLRA QILPVA
Sbjct: 53  LYRKEGEKQLARQAFDSARSIDPSLALPWAGMSADTHARDXTTDEAYESCLRAVQILPVA 112

Query: 69  EFQIGLAKLSLQAGHLSSPQVFGAIRQAVQLAPCYPESYNLSGLAFEAQLDYQSAVAAYR 128
           EFQIGLAKL+L +GHLSS QVFGAI+QAVQ AP YPES+NL+GL  EAQ DYQSAVA+YR
Sbjct: 113 EFQIGLAKLALLSGHLSSSQVFGAIQQAVQHAPYYPESHNLNGLVCEAQCDYQSAVASYR 172

Query: 129 LAHLTISHFSDRVPRSHVRDISINLARSL 158
           LA   I+ FS  + +SH+RDIS N+ARSL
Sbjct: 173 LARCAINTFSGSILKSHLRDISFNIARSL 201

[Close]

BLAST of MELO3C017073T3 vs. TrEMBL
Match: F6I6X8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g00260 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.5e-51
Identity = 108/149 (72.48%), Postives = 125/149 (83.89%), Query Frame = 1


Query: 9   LYWNRCEKQLARQAFDYARSIDPSLALPWAGMSADLNVRESTSEEAFESCLRAAQILPVA 68
           LY    EKQLARQAFD ARSIDPSLALPWAGMSAD + R+ T++EA+ESCLRA QILPVA
Sbjct: 484 LYRKEGEKQLARQAFDSARSIDPSLALPWAGMSADTHARDPTTDEAYESCLRAVQILPVA 543

Query: 69  EFQIGLAKLSLQAGHLSSPQVFGAIRQAVQLAPCYPESYNLSGLAFEAQLDYQSAVAAYR 128
           EFQIGLAKL+L +GHLSS QVFGAI+QAVQ AP YPES+NL+GL  EA+ DYQSAVA+YR
Sbjct: 544 EFQIGLAKLALLSGHLSSSQVFGAIQQAVQHAPYYPESHNLNGLVCEARCDYQSAVASYR 603

Query: 129 LAHLTISHFSDRVPRSHVRDISINLARSL 158
           LA   I+ FS  + +SH+RDIS N+ARSL
Sbjct: 604 LARCAINTFSGSILKSHLRDISFNIARSL 632

[Close]

BLAST of MELO3C017073T3 vs. TrEMBL
Match: A0A067HC24_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g045024mg PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.3e-47
Identity = 104/149 (69.80%), Postives = 118/149 (79.19%), Query Frame = 1


Query: 9   LYWNRCEKQLARQAFDYARSIDPSLALPWAGMSADLNVRESTSEEAFESCLRAAQILPVA 68
           LY    EK+LARQAFD ARSIDPSLALPWAGMSAD+   ES  ++AFESCLRA QILP+A
Sbjct: 427 LYGEVGEKKLARQAFDSARSIDPSLALPWAGMSADVQASESLVDDAFESCLRAVQILPLA 486

Query: 69  EFQIGLAKLSLQAGHLSSPQVFGAIRQAVQLAPCYPESYNLSGLAFEAQLDYQSAVAAYR 128
           EFQIGLAKL+  +GHLSS QVFGAI+QA+Q  P YPES+NL GL  EA+ DYQ+AV +YR
Sbjct: 487 EFQIGLAKLAKLSGHLSSSQVFGAIQQAIQRGPHYPESHNLYGLVCEARSDYQAAVVSYR 546

Query: 129 LAHLTISHFSDRVPRSHVRDISINLARSL 158
           LA   IS  S  VP SH +DISINLARSL
Sbjct: 547 LARYAISSSSGTVPNSHFQDISINLARSL 575

[Close]

BLAST of MELO3C017073T3 vs. TrEMBL
Match: V4SLV1_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10003766mg PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.3e-47
Identity = 104/149 (69.80%), Postives = 118/149 (79.19%), Query Frame = 1


Query: 9   LYWNRCEKQLARQAFDYARSIDPSLALPWAGMSADLNVRESTSEEAFESCLRAAQILPVA 68
           LY    EK+LARQAFD ARSIDPSLALPWAGMSAD+   ES  ++AFESCLRA QILP+A
Sbjct: 427 LYGEVGEKKLARQAFDSARSIDPSLALPWAGMSADVQASESLVDDAFESCLRAVQILPLA 486

Query: 69  EFQIGLAKLSLQAGHLSSPQVFGAIRQAVQLAPCYPESYNLSGLAFEAQLDYQSAVAAYR 128
           EFQIGLAKL+  +GHLSS QVFGAI+QA+Q  P YPES+NL GL  EA+ DYQ+AV +YR
Sbjct: 487 EFQIGLAKLAKLSGHLSSSQVFGAIQQAIQRGPHYPESHNLYGLVCEARSDYQAAVVSYR 546

Query: 129 LAHLTISHFSDRVPRSHVRDISINLARSL 158
           LA   IS  S  VP SH +DISINLARSL
Sbjct: 547 LARYAISSSSGTVPNSHFQDISINLARSL 575

[Close]

BLAST of MELO3C017073T3 vs. TAIR10
Match: AT1G76630.2 (AT1G76630.2 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 166.8 bits (421), Expect = 1.2e-41
Identity = 87/143 (60.84%), Postives = 107/143 (74.83%), Query Frame = 1


Query: 15  EKQLARQAFDYARSIDPSLALPWAGMSADLNVRESTSEEAFESCLRAAQILPVAEFQIGL 74
           E + A+QAFD ARSIDP+LALPWAG SAD   RESTS+EAFESCLRAAQI P+AEFQ+GL
Sbjct: 427 EMKFAKQAFDCARSIDPTLALPWAG-SADTYARESTSDEAFESCLRAAQISPLAEFQVGL 486

Query: 75  AKLSLQAGHLSSPQVFGAIRQAVQLAPCYPESYNLSGLAFEAQLDYQSAVAAYRLAHLTI 134
           A L+L  G++SSPQ+F  I QAVQ +P YPE +NL GL  EA+ +Y +A+A+YRLA   +
Sbjct: 487 AWLALLQGNISSPQIFACIEQAVQRSPYYPEPHNLHGLVCEARHNYHTAIASYRLALAAM 546

Query: 135 SHFSDRVPRSHVRDISINLARSL 158
           S + +   +SH   +SINL RSL
Sbjct: 547 SIYPESSVKSHAGKVSINLVRSL 568

[Close]

BLAST of MELO3C017073T3 vs. NCBI nr
Match: gi|659105230|ref|XP_008453040.1| (PREDICTED: uncharacterized protein LOC103493866 [Cucumis melo])

HSP 1 Score: 302.8 bits (774), Expect = 4.1e-79
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1


Query: 9   LYWNRCEKQLARQAFDYARSIDPSLALPWAGMSADLNVRESTSEEAFESCLRAAQILPVA 68
           LYWNRCEKQLARQAFDYARSIDPSLALPWAGMSADLNVRESTSEEAFESCLRAAQILPVA
Sbjct: 439 LYWNRCEKQLARQAFDYARSIDPSLALPWAGMSADLNVRESTSEEAFESCLRAAQILPVA 498

Query: 69  EFQIGLAKLSLQAGHLSSPQVFGAIRQAVQLAPCYPESYNLSGLAFEAQLDYQSAVAAYR 128
           EFQIGLAKLSLQAGHLSSPQVFGAIRQAVQLAPCYPESYNLSGLAFEAQLDYQSAVAAYR
Sbjct: 499 EFQIGLAKLSLQAGHLSSPQVFGAIRQAVQLAPCYPESYNLSGLAFEAQLDYQSAVAAYR 558

Query: 129 LAHLTISHFSDRVPRSHVRDISINLARSLCMV 161
           LAHLTISHFSDRVPRSHVRDISINLARSLCMV
Sbjct: 559 LAHLTISHFSDRVPRSHVRDISINLARSLCMV 590

[Close]

BLAST of MELO3C017073T3 vs. NCBI nr
Match: gi|778697318|ref|XP_011654295.1| (PREDICTED: tetratricopeptide repeat protein 37 [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 2.0e-78
Identity = 150/152 (98.68%), Postives = 152/152 (100.00%), Query Frame = 1


Query: 9   LYWNRCEKQLARQAFDYARSIDPSLALPWAGMSADLNVRESTSEEAFESCLRAAQILPVA 68
           LYWNRCEKQLARQAFDYARSIDPSLALPWAGMSADLNVRESTS+EAFESCLRAAQILPVA
Sbjct: 440 LYWNRCEKQLARQAFDYARSIDPSLALPWAGMSADLNVRESTSDEAFESCLRAAQILPVA 499

Query: 69  EFQIGLAKLSLQAGHLSSPQVFGAIRQAVQLAPCYPESYNLSGLAFEAQLDYQSAVAAYR 128
           EFQIGLAKLSLQAGHLSSPQVFGAIRQAVQLAPCYPESYNL+GLAFEAQLDYQSAVAAYR
Sbjct: 500 EFQIGLAKLSLQAGHLSSPQVFGAIRQAVQLAPCYPESYNLNGLAFEAQLDYQSAVAAYR 559

Query: 129 LAHLTISHFSDRVPRSHVRDISINLARSLCMV 161
           LAHLTISHFSDRVPRSHVRDISINLARSLCMV
Sbjct: 560 LAHLTISHFSDRVPRSHVRDISINLARSLCMV 591

[Close]

BLAST of MELO3C017073T3 vs. NCBI nr
Match: gi|147855264|emb|CAN81773.1| (hypothetical protein VITISV_042202 [Vitis vinifera])

HSP 1 Score: 211.5 bits (537), Expect = 1.2e-51
Identity = 109/149 (73.15%), Postives = 125/149 (83.89%), Query Frame = 1


Query: 9   LYWNRCEKQLARQAFDYARSIDPSLALPWAGMSADLNVRESTSEEAFESCLRAAQILPVA 68
           LY    EKQLARQAFD ARSIDPSLALPWAGMSAD + R+ T++EA+ESCLRA QILPVA
Sbjct: 53  LYRKEGEKQLARQAFDSARSIDPSLALPWAGMSADTHARDXTTDEAYESCLRAVQILPVA 112

Query: 69  EFQIGLAKLSLQAGHLSSPQVFGAIRQAVQLAPCYPESYNLSGLAFEAQLDYQSAVAAYR 128
           EFQIGLAKL+L +GHLSS QVFGAI+QAVQ AP YPES+NL+GL  EAQ DYQSAVA+YR
Sbjct: 113 EFQIGLAKLALLSGHLSSSQVFGAIQQAVQHAPYYPESHNLNGLVCEAQCDYQSAVASYR 172

Query: 129 LAHLTISHFSDRVPRSHVRDISINLARSL 158
           LA   I+ FS  + +SH+RDIS N+ARSL
Sbjct: 173 LARCAINTFSGSILKSHLRDISFNIARSL 201

[Close]

BLAST of MELO3C017073T3 vs. NCBI nr
Match: gi|297745630|emb|CBI40795.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 209.9 bits (533), Expect = 3.6e-51
Identity = 108/149 (72.48%), Postives = 125/149 (83.89%), Query Frame = 1


Query: 9   LYWNRCEKQLARQAFDYARSIDPSLALPWAGMSADLNVRESTSEEAFESCLRAAQILPVA 68
           LY    EKQLARQAFD ARSIDPSLALPWAGMSAD + R+ T++EA+ESCLRA QILPVA
Sbjct: 484 LYRKEGEKQLARQAFDSARSIDPSLALPWAGMSADTHARDPTTDEAYESCLRAVQILPVA 543

Query: 69  EFQIGLAKLSLQAGHLSSPQVFGAIRQAVQLAPCYPESYNLSGLAFEAQLDYQSAVAAYR 128
           EFQIGLAKL+L +GHLSS QVFGAI+QAVQ AP YPES+NL+GL  EA+ DYQSAVA+YR
Sbjct: 544 EFQIGLAKLALLSGHLSSSQVFGAIQQAVQHAPYYPESHNLNGLVCEARCDYQSAVASYR 603

Query: 129 LAHLTISHFSDRVPRSHVRDISINLARSL 158
           LA   I+ FS  + +SH+RDIS N+ARSL
Sbjct: 604 LARCAINTFSGSILKSHLRDISFNIARSL 632

[Close]

BLAST of MELO3C017073T3 vs. NCBI nr
Match: gi|731427623|ref|XP_010664047.1| (PREDICTED: uncharacterized protein LOC100259801 [Vitis vinifera])

HSP 1 Score: 209.9 bits (533), Expect = 3.6e-51
Identity = 108/149 (72.48%), Postives = 125/149 (83.89%), Query Frame = 1


Query: 9   LYWNRCEKQLARQAFDYARSIDPSLALPWAGMSADLNVRESTSEEAFESCLRAAQILPVA 68
           LY    EKQLARQAFD ARSIDPSLALPWAGMSAD + R+ T++EA+ESCLRA QILPVA
Sbjct: 435 LYRKEGEKQLARQAFDSARSIDPSLALPWAGMSADTHARDPTTDEAYESCLRAVQILPVA 494

Query: 69  EFQIGLAKLSLQAGHLSSPQVFGAIRQAVQLAPCYPESYNLSGLAFEAQLDYQSAVAAYR 128
           EFQIGLAKL+L +GHLSS QVFGAI+QAVQ AP YPES+NL+GL  EA+ DYQSAVA+YR
Sbjct: 495 EFQIGLAKLALLSGHLSSSQVFGAIQQAVQHAPYYPESHNLNGLVCEARCDYQSAVASYR 554

Query: 129 LAHLTISHFSDRVPRSHVRDISINLARSL 158
           LA   I+ FS  + +SH+RDIS N+ARSL
Sbjct: 555 LARCAINTFSGSILKSHLRDISFNIARSL 583

The following BLAST results are available for this feature:

BLAST of MELO3C017073T3 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SKI3_ARATH	2.2e-40	60.84	Tetratricopeptide repeat protein SKI3 OS=Arabidopsis thaliana GN=SKI3 PE=1 SV=1	[more]

BLAST of MELO3C017073T3 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4Q4_CUCSA	1.4e-78	98.68	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G665130 PE=4 SV=1	[more]
A5C333_VITVI	8.6e-52	73.15	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042202 PE=4 SV=1	[more]
F6I6X8_VITVI	2.5e-51	72.48	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g00260 PE=4 SV=...	[more]
A0A067HC24_CITSI	1.3e-47	69.80	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g045024mg PE=4 S...	[more]
V4SLV1_9ROSI	1.3e-47	69.80	Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10003766mg PE=...	[more]

BLAST of MELO3C017073T3 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76630.2	1.2e-41	60.84	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of MELO3C017073T3 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659105230\|ref\|XP_008453040.1\|	4.1e-79	100.00	PREDICTED: uncharacterized protein LOC103493866 [Cucumis melo]	[more]
gi\|778697318\|ref\|XP_011654295.1\|	2.0e-78	98.68	PREDICTED: tetratricopeptide repeat protein 37 [Cucumis sativus]	[more]
gi\|147855264\|emb\|CAN81773.1\|	1.2e-51	73.15	hypothetical protein VITISV_042202 [Vitis vinifera]	[more]
gi\|297745630\|emb\|CBI40795.3\|	3.6e-51	72.48	unnamed protein product [Vitis vinifera]	[more]
gi\|731427623\|ref\|XP_010664047.1\|	3.6e-51	72.48	PREDICTED: uncharacterized protein LOC100259801 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C017073	MELO3C017073	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C017073T3	MELO3C017073T3-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C017073T3.cds5	MELO3C017073T3.cds5	CDS
MELO3C017073T3.cds4	MELO3C017073T3.cds4	CDS
MELO3C017073T3.cds3	MELO3C017073T3.cds3	CDS
MELO3C017073T3.cds2	MELO3C017073T3.cds2	CDS
MELO3C017073T3.cds1	MELO3C017073T3.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 10..130 score: 4.
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 10..130 score: 1.1
None	No IPR available	PANTHER	PTHR15704	SUPERKILLER 3 PROTEIN-RELATED	coord: 8..160 score: 6.3