MELO3C017010.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGCTTCCATCTTCTTCATTCGATCCTTTCTGCAGTCGGATTTTGGTGATCAATTGAAAGTGTAGAGGGCAATTATGGGAGGCGGTGGACATGGAGCTGGAACTACTTACAAGGGCGTGACCATACACCCACCAAAGCGATGGCACACCGTCACCGGCAAGGGGCTGTGCGCCATTATGTGGTATAAACCCTAGCTTCATTAGTTTCCGATCGAGCAATTCTATTGAAGGAACCTAATTTTGATTTTCCTGTTTCAGCCAAATTGCCTCATAGTTAATTTCTTTACTTTCTTTTTCTGTTTTACAAATCCTGCGTCTATTCCGATCTGTCCTCGTCGCATTATTCCAAATAAATGCATCGCGCTCGAGTGGAGTTACAAGTTTTAATAATATCTTGATGCCAGATGCTATATCCGAGTTCATCGTCTCGTATGCAATTTGATGTTGAGAATCAGTAGGATTGCTATTGAGAAATTGGCATCTGGGTATTGACCAAATTTTTTATGACTATCTTTCAGGTTTTGGGTGCTATACAGGGCGAAACAAGATGGACCTGTAGTACTGGTAAAAATCACTGTTTCCTTAATCGTAAATTATATTTCTACTTATTATTGGTTAAAATCTCTAAATTTTCTGGCTGAAGTTCTTGAGGATATATATGTTATAGGGCAATCTTTGGAGCGATTTAAAATCATTTGTTGTTTTTAAATTTAGTAGAAAAATGTTGCAATCATTCAAAATCCATTATATTTCTAATAGTATGGAAAATTCAATTAGAAGTGTAAAATTAAACATTAAATTGATTTTAAGTGATTAAAGCCTAACCTTGTGTTTGGAAGTTATTTTAAATATGACAAAAAGTGACGTTAACCATTTTCAAAACATTTTGTTGCCATTTTTAGCTTACACAGTATGTATTTTCTATTCCAGAAAATCTAACTTTTGTAATATTTGTTACGATCAGGGCTGGAGACATCCATGGGAAGGCCATGGTCATGGTGACCATGGTGACCATGGGCATGGGCACTAGGTATTGTTTTTATTATTTACCTCTCTTTCCAAATTTCCCCAATTAATTATCTGTTTTTATAGAGAAAAAAAAGTCAAAACAAAGTGTGTCCTAGCATTCTGATATAATTACAACACTGAACTATTAGCTATTTGACATCAGGTAATATGAGCGCTATCAGCTATGGGCACTTTTTTTTTTTTTTTTGGTTGGAGTGCATTTCTATTGATAAGCTTTCCAGTTTACTTGTAGTGGCTCGATGCTAATGGTGGGCGAAGGGGAAATGGCAAGGCCTCAGTTGCAGGTTATCTATTTGAACGTTAAGAGTACCATATTTGCTAAGTTCTTTTCAAATAAGGATATTGTGATAGCCAAATGGATATAAACATCACTTCATCATTTTTATTTTGTAATCATGAATTCTTCTGATGTGTTTTGAATATTTAATTTGTGTTCAATCACAGCTGTGGTTGAGTTGAAGCAAAGATCAATGCGCTATTTCTGAATATAGGTTGTTCTTTTATTTCATTATGTCTTTTGCATGGCGCATACCTTTCTTTTAAATTAAGGTTATTCCATTTGAATAATTTGATCTGCTTAAACTGAAATTCACGTACCCTTCAATCTAGTGTCACAACAATGGGATTTTATTTGCCATGAGACAGTTACAGGCATTGTATTTGCATAAT AAGCTTCCATCTTCTTCATTCGATCCTTTCTGCAGTCGGATTTTGGTGATCAATTGAAAGTGTAGAGGGCAATTATGGGAGGCGGTGGACATGGAGCTGGAACTACTTACAAGGGCGTGACCATACACCCACCAAAGCGATGGCACACCGTCACCGGCAAGGGGCTGTGCGCCATTATGTGGTTTTGGGTGCTATACAGGGCGAAACAAGATGGACCTGTAGTACTGGGCTGGAGACATCCATGGGAAGGCCATGGTCATGGTGACCATGGTGACCATGGGCATGGGCACTAGAGAAAAAAAAGTCAAAACAAAGTGTGTCCTAGCATTCTGATATAATTACAACACTGAACTATTAGCTATTTGACATCAGTTTACTTGTAGTGGCTCGATGCTAATGGTGGGCGAAGGGGAAATGGCAAGGCCTCAGTTGCAGGTTATCTATTTGAACGTTAAGAGTACCATATTTGCTAAGTTCTTTTCAAATAAGGATATTGTGATAGCCAAATGGATATAAACATCACTTCATCATTTTTATTTTGTAATCATGAATTCTTCTGATGTGTTTTGAATATTTAATTTGTGTTCAATCACAGCTGTGGTTGAGTTGAAGCAAAGATCAATGCGCTATTTCTGAATATAGGTTGTTCTTTTATTTCATTATGTCTTTTGCATGGCGCATACCTTTCTTTTAAATTAAGGTTATTCCATTTGAATAATTTGATCTGCTTAAACTGAAATTCACGTACCCTTCAATCTAGTGTCACAACAATGGGATTTTATTTGCCATGAGACAGTTACAGGCATTGTATTTGCATAAT ATGGGAGGCGGTGGACATGGAGCTGGAACTACTTACAAGGGCGTGACCATACACCCACCAAAGCGATGGCACACCGTCACCGGCAAGGGGCTGTGCGCCATTATGTGGTTTTGGGTGCTATACAGGGCGAAACAAGATGGACCTGTAGTACTGGGCTGGAGACATCCATGGGAAGGCCATGGTCATGGTGACCATGGTGACCATGGGCATGGGCACTAG MGGGGHGAGTTYKGVTIHPPKRWHTVTGKGLCAIMWFWVLYRAKQDGPVVLGWRHPWEGHGHGDHGDHGHGH
BLAST of MELO3C017010.2.1 vs. NCBI nr
Match: XP_008452937.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cucumis melo] >XP_008452938.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cucumis melo]) HSP 1 Score: 156.4 bits (394), Expect = 3.7e-35 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of MELO3C017010.2.1 vs. NCBI nr
Match: XP_004145533.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cucumis sativus] >XP_011654263.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cucumis sativus] >KGN55485.1 hypothetical protein Csa_4G653460 [Cucumis sativus]) HSP 1 Score: 149.4 bits (376), Expect = 4.5e-33 Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of MELO3C017010.2.1 vs. NCBI nr
Match: XP_022936519.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cucurbita moschata] >XP_022936520.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cucurbita moschata] >XP_022975909.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cucurbita maxima] >XP_022975910.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cucurbita maxima] >XP_023534987.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cucurbita pepo subsp. pepo] >XP_023534988.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 137.9 bits (346), Expect = 1.4e-29 Identity = 60/72 (83.33%), Postives = 63/72 (87.50%), Query Frame = 0
BLAST of MELO3C017010.2.1 vs. NCBI nr
Match: OMO85481.1 (hypothetical protein COLO4_21601 [Corchorus olitorius] >OMP02996.1 hypothetical protein CCACVL1_02628 [Corchorus capsularis]) HSP 1 Score: 137.5 bits (345), Expect = 1.8e-29 Identity = 59/67 (88.06%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of MELO3C017010.2.1 vs. NCBI nr
Match: XP_024989510.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cynara cardunculus var. scolymus]) HSP 1 Score: 137.1 bits (344), Expect = 2.3e-29 Identity = 55/61 (90.16%), Postives = 59/61 (96.72%), Query Frame = 0
BLAST of MELO3C017010.2.1 vs. TAIR10
Match: AT1G76200.1 (unknown protein) HSP 1 Score: 133.7 bits (335), Expect = 4.7e-32 Identity = 55/67 (82.09%), Postives = 60/67 (89.55%), Query Frame = 0
BLAST of MELO3C017010.2.1 vs. Swiss-Prot
Match: sp|Q8LDK3|NDUB2_ARATH (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At1g76200 PE=3 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 8.4e-31 Identity = 55/67 (82.09%), Postives = 60/67 (89.55%), Query Frame = 0
BLAST of MELO3C017010.2.1 vs. TrEMBL
Match: tr|A0A1S3BV22|A0A1S3BV22_CUCME (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 OS=Cucumis melo OX=3656 GN=LOC103493798 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 2.5e-35 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of MELO3C017010.2.1 vs. TrEMBL
Match: tr|A0A0A0L0L4|A0A0A0L0L4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G653460 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 3.0e-33 Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of MELO3C017010.2.1 vs. TrEMBL
Match: tr|A0A1R3K7H4|A0A1R3K7H4_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_02628 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.2e-29 Identity = 59/67 (88.06%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of MELO3C017010.2.1 vs. TrEMBL
Match: tr|A0A1R3ISD8|A0A1R3ISD8_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_21601 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.2e-29 Identity = 59/67 (88.06%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of MELO3C017010.2.1 vs. TrEMBL
Match: tr|I3T978|I3T978_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 4.5e-29 Identity = 57/63 (90.48%), Postives = 59/63 (93.65%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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