MELO3C016872.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C016872.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Late embryogenesis abundant protein, LEA-14
Location	chr07 : 1497395 .. 1498376 (-)
Sequence length	982

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCAAACTCACAGATTCTCTTAGTTGTACACAAAGCAAACCACTTACTCCTCTTTCTCTCTACTTTCCTTCTTCTTCTTCTTCTTCTTCAATTCCTCCCTTCCCAAACTCCCAATTCCCCACCATGCCCGACGCCGCTCCAAAACCCTCCGTTAACGGTGCCGCCACTACCAACGGCACTATCCCTCCTTCCTCTTCCAAACCAAACTTCCGTCAACACCCTTACCGTCCCCCTCCTTACAGGAACCACCACAATCACCACCGTACCCGTCGCAATCTCTGCTGCTGCTTCTGCTTTTGGACCATCATTATCGTTTTAGGCCTCATTCTTCTAGCTGCCATTGCCGGTGCTGCTCTTTACGTATTGTACCGTCCTCATCGCCCTCAATTCACTATCTCCTCCCTTCGAATTTCCAAGCTTAATCTCACTACCTCCCCGGATTCCTCCGCCTCTCACCTCTCATCTCTTTTCAATCTCACTCTCTCATCCTTTAACCCCAACTCCCACATTACCTTCTCTTACGACCCTTTCCTTATCTCCACTTTCTCCAATTCCGTCCTCCTCGCCAATGGCTCCATCCCGGCTTTCATCAGTGGAACCAAGAATCAGACGGTGTTTCGAACGTTGATGTCCGGCGCCGAAGATCTTGATGCGGATTCCGTTACGAGTCTCAGATCGGATCTGAAGAAGAGAGGGGGAACTCCTCTGACGATTGAAATGGATACGAAAGTGAAAGTCAAAATTGGACGAGTGAATAGTAAGAAAGTCGGAATCAGAGTAAGCTGTGAAGGAATTAAAGGAATTCCGCCACGAGGAAAGACGCCGACGGTGGCCTCTGTTTCCGACGCCGATTGTAAGGTTGATCTCCGAATCAAGATCTGGATATTCACTCTCTAATTACTCGGTAACAAATATTATATAATATCTTTCTTTTTTTTTTTCACCTTTGCTTTTGTTTTGTACTTTTCTTTTCTTTTTTTC

mRNA sequence

AAGCAAACTCACAGATTCTCTTAGTTGTACACAAAGCAAACCACTTACTCCTCTTTCTCTCTACTTTCCTTCTTCTTCTTCTTCTTCTTCAATTCCTCCCTTCCCAAACTCCCAATTCCCCACCATGCCCGACGCCGCTCCAAAACCCTCCGTTAACGGTGCCGCCACTACCAACGGCACTATCCCTCCTTCCTCTTCCAAACCAAACTTCCGTCAACACCCTTACCGTCCCCCTCCTTACAGGAACCACCACAATCACCACCGTACCCGTCGCAATCTCTGCTGCTGCTTCTGCTTTTGGACCATCATTATCGTTTTAGGCCTCATTCTTCTAGCTGCCATTGCCGGTGCTGCTCTTTACGTATTGTACCGTCCTCATCGCCCTCAATTCACTATCTCCTCCCTTCGAATTTCCAAGCTTAATCTCACTACCTCCCCGGATTCCTCCGCCTCTCACCTCTCATCTCTTTTCAATCTCACTCTCTCATCCTTTAACCCCAACTCCCACATTACCTTCTCTTACGACCCTTTCCTTATCTCCACTTTCTCCAATTCCGTCCTCCTCGCCAATGGCTCCATCCCGGCTTTCATCAGTGGAACCAAGAATCAGACGGTGTTTCGAACGTTGATGTCCGGCGCCGAAGATCTTGATGCGGATTCCGTTACGAGTCTCAGATCGGATCTGAAGAAGAGAGGGGGAACTCCTCTGACGATTGAAATGGATACGAAAGTGAAAGTCAAAATTGGACGAGTGAATAGTAAGAAAGTCGGAATCAGAGTAAGCTGTGAAGGAATTAAAGGAATTCCGCCACGAGGAAAGACGCCGACGGTGGCCTCTGTTTCCGACGCCGATTGTAAGGTTGATCTCCGAATCAAGATCTGGATATTCACTCTCTAATTACTCGGTAACAAATATTATATAATATCTTTCTTTTTTTTTTTCACCTTTGCTTTTGTTTTGTACTTTTCTTTTCTTTTTTTC

Coding sequence (CDS)

AGCAAACTCACAGATTCTCTTAGTTGTACACAAAGCAAACCACTTACTCCTCTTTCTCTCTACTTTCCTTCTTCTTCTTCTTCTTCTTCAATTCCTCCCTTCCCAAACTCCCAATTCCCCACCATGCCCGACGCCGCTCCAAAACCCTCCGTTAACGGTGCCGCCACTACCAACGGCACTATCCCTCCTTCCTCTTCCAAACCAAACTTCCGTCAACACCCTTACCGTCCCCCTCCTTACAGGAACCACCACAATCACCACCGTACCCGTCGCAATCTCTGCTGCTGCTTCTGCTTTTGGACCATCATTATCGTTTTAGGCCTCATTCTTCTAGCTGCCATTGCCGGTGCTGCTCTTTACGTATTGTACCGTCCTCATCGCCCTCAATTCACTATCTCCTCCCTTCGAATTTCCAAGCTTAATCTCACTACCTCCCCGGATTCCTCCGCCTCTCACCTCTCATCTCTTTTCAATCTCACTCTCTCATCCTTTAACCCCAACTCCCACATTACCTTCTCTTACGACCCTTTCCTTATCTCCACTTTCTCCAATTCCGTCCTCCTCGCCAATGGCTCCATCCCGGCTTTCATCAGTGGAACCAAGAATCAGACGGTGTTTCGAACGTTGATGTCCGGCGCCGAAGATCTTGATGCGGATTCCGTTACGAGTCTCAGATCGGATCTGAAGAAGAGAGGGGGAACTCCTCTGACGATTGAAATGGATACGAAAGTGAAAGTCAAAATTGGACGAGTGAATAGTAAGAAAGTCGGAATCAGAGTAAGCTGTGAAGGAATTAAAGGAATTCCGCCACGAGGAAAGACGCCGACGGTGGCCTCTGTTTCCGACGCCGATTGTAAGGTTGATCTCCGAATCAAGATCTGGATATTCACTCTCTAA

Protein sequence

SKLTDSLSCTQSKPLTPLSLYFPSSSSSSSIPPFPNSQFPTMPDAAPKPSVNGAATTNGTIPPSSSKPNFRQHPYRPPPYRNHHNHHRTRRNLCCCFCFWTIIIVLGLILLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSSFNPNSHITFSYDPFLISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSVTSLRSDLKKRGGTPLTIEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVSDADCKVDLRIKIWIFTL

Homology

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BLAST of MELO3C016872.2.1 vs. NCBI nr
Match: XP_008452726.1 (PREDICTED: uncharacterized protein At1g08160 [Cucumis melo])

HSP 1 Score: 401.0 bits (1029), Expect = 3.6e-108
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 42  MPDAAPKPSVNGAATTNGTIPPSSSKPNFRQHPYXXXXXXXXXXXXXXXXXXXXXXXXXX 101
           MPDAAPKPSVNGAATTNGTIPPSSSKPNFRQHPYXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MPDAAPKPSVNGAATTNGTIPPSSSKPNFRQHPYXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 102 XXXXXXXXXXXXXXXAALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTL 161
           XXXXXXXXXXXXXXXAALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTL
Sbjct: 61  XXXXXXXXXXXXXXXAALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTL 120

Query: 162 SSFNPNSHITFSYDPFLISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSV 221
           SSFNPNSHITFSYDPFLISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSV
Sbjct: 121 SSFNPNSHITFSYDPFLISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSV 180

Query: 222 TSLRSDLKKRGGTPLTIEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVS 281
           TSLRSDLKKRGGTPLTIEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVS
Sbjct: 181 TSLRSDLKKRGGTPLTIEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVS 240

Query: 282 DADCKVDLRIKIWIFTL 299
           DADCKVDLRIKIWIFTL
Sbjct: 241 DADCKVDLRIKIWIFTL 257

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BLAST of MELO3C016872.2.1 vs. NCBI nr
Match: XP_022977096.1 (NDR1/HIN1-like protein 6 [Cucurbita maxima])

HSP 1 Score: 328.9 bits (842), Expect = 1.7e-86
Identity = 212/255 (83.14%), Postives = 223/255 (87.45%), Query Frame = 0


Query: 47  PKPSVNGAA---TTNGTIPPSSSKPNFRQHPYXXXXXXXXXXXXXXXXXXXXXXXXXXXX 106
           PKP+VNG+A   T NGT P S  KP FR    XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 9   PKPAVNGSAAPPTVNGTAPASGGKPQFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 68

Query: 107 XXXXXXXXXXXXXAALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSS 166
           XXX          AALYVLYRPHRPQFTISSLRISKLNLTT+ DSSASH+SSLFNLTLSS
Sbjct: 69  XXXGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSSLFNLTLSS 128

Query: 167 FNPNSHITFSYDPFLISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSVTS 226
           FNPNSHIT++YDPF +S FSNSVLLANGSIPAF S TKNQTVFR+LMSGAEDLDADSVTS
Sbjct: 129 FNPNSHITYAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAEDLDADSVTS 188

Query: 227 LRSDLKKRGGTPLTIEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVSDA 286
           LRSDLKK+GG PLTIEMDTKVKVKIG VNSKKVGIRV+CEGIKG PP+GK PTVASVSDA
Sbjct: 189 LRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQPTVASVSDA 248

Query: 287 DCKVDLRIKIWIFTL 299
           DCKVDLRIKIWIFTL
Sbjct: 249 DCKVDLRIKIWIFTL 263

[Close]

BLAST of MELO3C016872.2.1 vs. NCBI nr
Match: XP_022936399.1 (NDR1/HIN1-like protein 6 [Cucurbita moschata] >XP_022936400.1 NDR1/HIN1-like protein 6 [Cucurbita moschata])

HSP 1 Score: 317.4 bits (812), Expect = 5.2e-83
Identity = 164/182 (90.11%), Postives = 172/182 (94.51%), Query Frame = 0


Query: 117 AALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSSFNPNSHITFSYDP 176
           AALYVLYRPHRPQFTISSLRISKLNLTT+ DSSASH+SSLFNLTLSSFNPNSHITF+YDP
Sbjct: 82  AALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSSLFNLTLSSFNPNSHITFAYDP 141

Query: 177 FLISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSVTSLRSDLKKRGGTPL 236
           F +S FSNSVLLANGSIPAF S TKNQTVFR+LMSGAEDLDADS TSLRSDLKK+GG PL
Sbjct: 142 FTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAEDLDADSFTSLRSDLKKKGGAPL 201

Query: 237 TIEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVSDADCKVDLRIKIWIF 296
           TIEMDTKVKVKIG VNSKKVGIRV+CEGIKG PP+GK PTVASVSDADCKVDLRIKIWIF
Sbjct: 202 TIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQPTVASVSDADCKVDLRIKIWIF 261

Query: 297 TL 299
           TL
Sbjct: 262 TL 263

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BLAST of MELO3C016872.2.1 vs. NCBI nr
Match: XP_023535537.1 (NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317.4 bits (812), Expect = 5.2e-83
Identity = 164/182 (90.11%), Postives = 172/182 (94.51%), Query Frame = 0


Query: 117 AALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSSFNPNSHITFSYDP 176
           AALYVLYRPHRPQFTISSLRISKLNLTT+ DSSASH+SSLFNLTLSSFNPNSHITF+YDP
Sbjct: 82  AALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSSLFNLTLSSFNPNSHITFAYDP 141

Query: 177 FLISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSVTSLRSDLKKRGGTPL 236
           F +S FSNSVLLANGSIPAF S TKNQTVFR+LMSGAEDLDADSVTSLRSDLKK+GG PL
Sbjct: 142 FTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAEDLDADSVTSLRSDLKKKGGAPL 201

Query: 237 TIEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVSDADCKVDLRIKIWIF 296
           TIEMDTKVKVKIG VNSKKVGIRV+CEGIKG PP+GK PTVA VSDADCKVDLRIKIWIF
Sbjct: 202 TIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQPTVAPVSDADCKVDLRIKIWIF 261

Query: 297 TL 299
           TL
Sbjct: 262 TL 263

[Close]

BLAST of MELO3C016872.2.1 vs. NCBI nr
Match: XP_023523397.1 (NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303.5 bits (776), Expect = 7.8e-79
Identity = 197/251 (78.49%), Postives = 209/251 (83.27%), Query Frame = 0


Query: 48  KPSVNGAATTNGTIPPSSSKPNFRQHPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 107
           KP+VNGAA      P SSSKP FRQ PY     XXXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 10  KPAVNGAA------PASSSKPQFRQQPY-----XXXXXXXXXXXXXXXXXXXXXXXXXXG 69

Query: 108 XXXXXXXXXAALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSSFNPN 167
                    AALYVLYRPHRPQFTISSLRISKLNLT + DSSAS+LSSLFNLTLSSFNPN
Sbjct: 70  LALLAAITGAALYVLYRPHRPQFTISSLRISKLNLTIAADSSASYLSSLFNLTLSSFNPN 129

Query: 168 SHITFSYDPFLISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSVTSLRSD 227
           SHITFSYDPF +S  S+SVLL NGSIP F S T NQTVFR L+SGA DLDADSVTSLRSD
Sbjct: 130 SHITFSYDPFTLSCLSHSVLLGNGSIPEFTSATNNQTVFRALISGARDLDADSVTSLRSD 189

Query: 228 LKKRGGTPLTIEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVSDADCKV 287
           LKK+GG PLTIEMDTKV VKIG+V SKKVGIRV+C+GIKG PP+GK+PTVASV DA CKV
Sbjct: 190 LKKKGGAPLTIEMDTKVNVKIGKVKSKKVGIRVTCDGIKGTPPKGKSPTVASVLDAACKV 249

Query: 288 DLRIKIWIFTL 299
           DLRIKIWIFTL
Sbjct: 250 DLRIKIWIFTL 249

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BLAST of MELO3C016872.2.1 vs. TAIR10
Match: AT5G11890.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 164.5 bits (415), Expect = 1.0e-40
Identity = 89/182 (48.90%), Postives = 121/182 (66.48%), Query Frame = 0


Query: 118 ALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSSFNPNSHITFSYDPF 177
           A+YV+Y P  P F++ S+RIS++NLTTS DSS SHLSS FN TL S NPN H++FSYDPF
Sbjct: 103 AMYVIYHPRPPSFSVPSIRISRVNLTTSSDSSVSHLSSFFNFTLISENPNQHLSFSYDPF 162

Query: 178 LISTFS--NSVLLANGSIPAFISGTKNQTVFRTLM---SGAEDLDADSVTSLRSDLKKRG 237
            ++  S  +  +L NG++PAF S   N+T F  ++   + A +LD D    LRSDL  R 
Sbjct: 163 TVTVNSAKSGTMLGNGTVPAFFSDNGNKTSFHGVIATSTAARELDPDEAKHLRSDL-TRA 222

Query: 238 GTPLTIEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVSDADCKVDLRIK 295
                IEM TKVK+ +G++ S+ V I+V+CEG +G  P+GKTP VA+     CK DL +K
Sbjct: 223 RVGYEIEMRTKVKMIMGKLKSEGVEIKVTCEGFEGTIPKGKTPIVATSKKTKCKSDLSVK 282

[Close]

BLAST of MELO3C016872.2.1 vs. TAIR10
Match: AT1G17620.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 127.1 bits (318), Expect = 1.8e-29
Identity = 78/183 (42.62%), Postives = 109/183 (59.56%), Query Frame = 0


Query: 122 LYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSSFNPNSHITFSYDPFLIST 181
           +YRP RP FT+S L+IS LN T     SA  L++  +L++ + NPN ++ F YD   I+ 
Sbjct: 86  IYRPQRPSFTVSELKISTLNFT-----SAVRLTTAISLSVIARNPNKNVGFIYDVTDITL 145

Query: 182 FSNS------VLLANGSIPAFISGTKNQTVFR-TLMSGAEDLDADSVTSLRSDLKKRGGT 241
           +  S      V++  G+I AF  G KN T  R T+ S  ++LD  S   L+ DLK +   
Sbjct: 146 YKASTGGDDDVVIGKGTIAAFSHGKKNTTTLRSTIGSPPDELDEISAGKLKGDLKAKKAV 205

Query: 242 PLTIEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVSDADCKVDLRIKIW 298
            + I +++KVKVK+G + + K GIRV+CEGIK + P GK  T A+ S A CKVD R KIW
Sbjct: 206 AIKIVLNSKVKVKMGALKTPKSGIRVTCEGIKVVAPTGKKATTATTSAAKCKVDPRFKIW 263

[Close]

BLAST of MELO3C016872.2.1 vs. TAIR10
Match: AT1G65690.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 68.2 bits (165), Expect = 1.0e-11
Identity = 53/174 (30.46%), Postives = 90/174 (51.72%), Query Frame = 0


Query: 119 LYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSSFNPNSHITFSY-DPF 178
           LY++++P  P ++I  L++++  L  + DSS   L++ FN+T+++ NPN  I   Y D  
Sbjct: 87  LYLVFKPKLPDYSIDRLQLTRFAL--NQDSS---LTTAFNVTITAKNPNEKIGIYYEDGS 146

Query: 179 LISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSVTSLRSDLKKRGGTPLT 238
            I+ +     L+NGS+P F  G +N TV    M+G     +   T+L    ++ G  PL 
Sbjct: 147 KITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQTQNASGLRTTLEEQQQRTGNIPLR 206

Query: 239 IEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVSDADCKVDLRI 292
           I ++  V+VK G++   +V   V C G+        T  V  +  + CK  LR+
Sbjct: 207 IRVNQPVRVKFGKLKLFEVRFLVRC-GV--FVDSLATNNVIKIQSSSCKFRLRL 252

[Close]

BLAST of MELO3C016872.2.1 vs. TAIR10
Match: AT5G36970.1 (NDR1/HIN1-like 25)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-11
Identity = 46/145 (31.72%), Postives = 76/145 (52.41%), Query Frame = 0


Query: 119 LYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSSFNPNSHITFSY-DPF 178
           LY+++RP  P + I  L++++  L  + D S   LS+ FN+T+++ NPN  I   Y D  
Sbjct: 83  LYLVFRPKFPDYNIDRLQLTRFQL--NQDLS---LSTAFNVTITAKNPNEKIGIYYEDGS 142

Query: 179 LISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSVTSLRSDLKKRGGTPLT 238
            IS       ++NGS+P F  G +N T+    M+G        +T+L+   +  G  PL 
Sbjct: 143 KISVLYMQTRISNGSLPKFYQGHENTTIILVEMTGFTQNATSLMTTLQEQQRLTGSIPLR 202

Query: 239 IEMDTKVKVKIGRVNSKKVGIRVSC 263
           I +   V++K+G++   KV   V C
Sbjct: 203 IRVTQPVRIKLGKLKLMKVRFLVRC 222

[Close]

BLAST of MELO3C016872.2.1 vs. TAIR10
Match: AT2G27080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 67.4 bits (163), Expect = 1.7e-11
Identity = 45/149 (30.20%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 117 AALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSSFNPNSHITFSYD- 176
           A LY++YRP  P+++I    +S +NL     +S S +S  FN+T+ S N N  I   Y+ 
Sbjct: 94  AVLYLIYRPEAPKYSIEGFSVSGINL-----NSTSPISPSFNVTVRSRNGNGKIGVYYEK 153

Query: 177 PFLISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAE-DLDADSVTSLRSDLKKRGGT 236
              +  + N V ++NG +P F    KN TV + ++SG++  L +     +R+++ K+   
Sbjct: 154 ESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKK-TV 213

Query: 237 PLTIEMDTKVKVKIGRVNSKKVGIRVSCE 264
           P  +++   VK+K G V +  + + V C+
Sbjct: 214 PFKLKIKAPVKIKFGSVKTWTMIVNVDCD 236

[Close]

BLAST of MELO3C016872.2.1 vs. Swiss-Prot
Match: sp|Q8LD98|NHL6_ARATH (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.8e-10
Identity = 53/174 (30.46%), Postives = 90/174 (51.72%), Query Frame = 0


Query: 119 LYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSSFNPNSHITFSY-DPF 178
           LY++++P  P ++I  L++++  L  + DSS   L++ FN+T+++ NPN  I   Y D  
Sbjct: 87  LYLVFKPKLPDYSIDRLQLTRFAL--NQDSS---LTTAFNVTITAKNPNEKIGIYYEDGS 146

Query: 179 LISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSVTSLRSDLKKRGGTPLT 238
            I+ +     L+NGS+P F  G +N TV    M+G     +   T+L    ++ G  PL 
Sbjct: 147 KITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQTQNASGLRTTLEEQQQRTGNIPLR 206

Query: 239 IEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVSDADCKVDLRI 292
           I ++  V+VK G++   +V   V C G+        T  V  +  + CK  LR+
Sbjct: 207 IRVNQPVRVKFGKLKLFEVRFLVRC-GV--FVDSLATNNVIKIQSSSCKFRLRL 252

[Close]

BLAST of MELO3C016872.2.1 vs. Swiss-Prot
Match: sp|Q9ZVD2|NHL13_ARATH (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.1e-10
Identity = 45/149 (30.20%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 117 AALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSSFNPNSHITFSYD- 176
           A LY++YRP  P+++I    +S +NL     +S S +S  FN+T+ S N N  I   Y+ 
Sbjct: 94  AVLYLIYRPEAPKYSIEGFSVSGINL-----NSTSPISPSFNVTVRSRNGNGKIGVYYEK 153

Query: 177 PFLISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAE-DLDADSVTSLRSDLKKRGGT 236
              +  + N V ++NG +P F    KN TV + ++SG++  L +     +R+++ K+   
Sbjct: 154 ESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKK-TV 213

Query: 237 PLTIEMDTKVKVKIGRVNSKKVGIRVSCE 264
           P  +++   VK+K G V +  + + V C+
Sbjct: 214 PFKLKIKAPVKIKFGSVKTWTMIVNVDCD 236

[Close]

BLAST of MELO3C016872.2.1 vs. Swiss-Prot
Match: sp|Q9FI03|NHL26_ARATH (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-07
Identity = 48/172 (27.91%), Postives = 77/172 (44.77%), Query Frame = 0


Query: 119 LYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSSFNPNSHITFSYDPFL 178
           ++++  P RP+F+++   I  LNLTT   SS   L+S   LTL S NPN  +   YD  L
Sbjct: 45  VWLILHPERPEFSLTEADIYSLNLTT---SSTHLLNSSVQLTLFSKNPNKKVGIYYDKLL 104

Query: 179 I-STFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSVTSLRSDLKKRGGTPLT 238
           + + +    + +  S+P F    +   +    + G E   A S     S  +  G   + 
Sbjct: 105 VYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKIIIG 164

Query: 239 IEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVSDADCKVDL 290
           ++MD K++ KIG   S      V+C  I        TP +AS+    C   +
Sbjct: 165 MKMDGKLRWKIGTWVSGAYRFNVNCLAIVAFGMNMTTPPLASLQGTRCSTTI 213

[Close]

BLAST of MELO3C016872.2.1 vs. Swiss-Prot
Match: sp|Q9SJ54|NHL12_ARATH (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 7.3e-04
Identity = 38/146 (26.03%), Postives = 67/146 (45.89%), Query Frame = 0


Query: 119 LYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSSFNPNSHITFSYDPF- 178
           ++++ +P +P+F +    +   NL     S  + L+S F +T++S N NS I   YD   
Sbjct: 39  VWIILQPTKPRFILQDATVYAFNL-----SQPNLLTSNFQITIASRNRNSRIGIYYDRLH 98

Query: 179 LISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSVTSLRSDLKKRGGTPLT 238
           + +T+ N  +    +IP    G K   V+   + G     A        D + RG   L 
Sbjct: 99  VYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVALGDEQNRGFVTLI 158

Query: 239 IEMDTKVKVKIGRVNSKKVGIRVSCE 264
           I  D +V+ K+G + + K  + V C+
Sbjct: 159 IRADGRVRWKVGTLITGKYHLHVRCQ 179

[Close]

BLAST of MELO3C016872.2.1 vs. TrEMBL
Match: tr|A0A1S3BVB2|A0A1S3BVB2_CUCME (uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103493662 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 2.4e-108
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 42  MPDAAPKPSVNGAATTNGTIPPSSSKPNFRQHPYXXXXXXXXXXXXXXXXXXXXXXXXXX 101
           MPDAAPKPSVNGAATTNGTIPPSSSKPNFRQHPYXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MPDAAPKPSVNGAATTNGTIPPSSSKPNFRQHPYXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 102 XXXXXXXXXXXXXXXAALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTL 161
           XXXXXXXXXXXXXXXAALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTL
Sbjct: 61  XXXXXXXXXXXXXXXAALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTL 120

Query: 162 SSFNPNSHITFSYDPFLISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSV 221
           SSFNPNSHITFSYDPFLISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSV
Sbjct: 121 SSFNPNSHITFSYDPFLISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSV 180

Query: 222 TSLRSDLKKRGGTPLTIEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVS 281
           TSLRSDLKKRGGTPLTIEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVS
Sbjct: 181 TSLRSDLKKRGGTPLTIEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVS 240

Query: 282 DADCKVDLRIKIWIFTL 299
           DADCKVDLRIKIWIFTL
Sbjct: 241 DADCKVDLRIKIWIFTL 257

[Close]

BLAST of MELO3C016872.2.1 vs. TrEMBL
Match: tr|A0A0A0L2R4|A0A0A0L2R4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646080 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.3e-78
Identity = 160/181 (88.40%), Postives = 163/181 (90.06%), Query Frame = 0


Query: 118 ALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSSFNPNSHITFSYDPF 177
           ALYVLYRPHRPQFTISSLRISKLNLTTS DSSASHLSSL               FSYDPF
Sbjct: 79  ALYVLYRPHRPQFTISSLRISKLNLTTSSDSSASHLSSLXXXXXXXXXXXXXXXFSYDPF 138

Query: 178 LISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSVTSLRSDLKKRGGTPLT 237
           L+STFSNSVLLANGSIPAF SGTKNQTVFR LMSGAEDLDADSVTSLRSDLKKRGGTPLT
Sbjct: 139 LLSTFSNSVLLANGSIPAFTSGTKNQTVFRALMSGAEDLDADSVTSLRSDLKKRGGTPLT 198

Query: 238 IEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVSDADCKVDLRIKIWIFT 297
           IEMDTKVKVKIGRVNSKKVGIRVSCEG+KGIPPRGKTP+VASVSDADCKVDLRIKIWIFT
Sbjct: 199 IEMDTKVKVKIGRVNSKKVGIRVSCEGMKGIPPRGKTPSVASVSDADCKVDLRIKIWIFT 258

Query: 298 L 299
           L
Sbjct: 259 L 259

[Close]

BLAST of MELO3C016872.2.1 vs. TrEMBL
Match: tr|A0A2N9F759|A0A2N9F759_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10850 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.5e-59
Identity = 121/183 (66.12%), Postives = 151/183 (82.51%), Query Frame = 0


Query: 117 AALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSSFNPNSHITFSYDP 176
           AA YVLYRP RPQF+ISSLRI+KLNLTT   SS SHL+SL N+TLSS NPNSHI F YD 
Sbjct: 81  AAFYVLYRPQRPQFSISSLRIAKLNLTTDSSSSTSHLNSLLNITLSSKNPNSHIVFFYDS 140

Query: 177 FLISTF--SNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSVTSLRSDLKKRGGT 236
           F +S    SNSV LANGSIP+F+SG  N+T FR++++ + DLD +SVT+LRSDLK++ G 
Sbjct: 141 FTLSVLSNSNSVQLANGSIPSFVSGKNNETNFRSVLTSSRDLDTESVTALRSDLKRKTGV 200

Query: 237 PLTIEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVSDADCKVDLRIKIW 296
           P+ ++MDTKVKVK+G + SKKVGIRV+C+GI+GI P+ K+P+VASVSDA C+VDLRIKIW
Sbjct: 201 PMKVQMDTKVKVKMGNLKSKKVGIRVTCQGIRGIAPKSKSPSVASVSDAKCEVDLRIKIW 260

Query: 297 IFT 298
            +T
Sbjct: 261 KWT 263

[Close]

BLAST of MELO3C016872.2.1 vs. TrEMBL
Match: tr|A0A2P5C5N4|A0A2P5C5N4_PARAD (Late embryogenesis abundant protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_181970 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.5e-57
Identity = 116/178 (65.17%), Postives = 149/178 (83.71%), Query Frame = 0


Query: 121 VLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSSFNPNSHITFSYDPFLIS 180
           VLY P RP+FT++SLRI+KLNLTTSPDSS+S L++L NLT+SS NPN H+TF YD F ++
Sbjct: 98  VLYHPTRPEFTVTSLRIAKLNLTTSPDSSSSRLTALLNLTVSSKNPNGHLTFFYDAFAVT 157

Query: 181 TFSNSVLLANGSIPAFISGTKNQTVFRTLM-SGAEDLDADSVTSLRSDLKKRGGTPLTIE 240
             S+SV + NGSIPAF+S  KN+T FRT++ S ++DLD D+ TSLRSDLKK+GG PL I+
Sbjct: 158 ASSSSVQIGNGSIPAFVSEKKNETTFRTIVASSSQDLDTDATTSLRSDLKKKGGVPLKIQ 217

Query: 241 MDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVSDADCKVDLRIKIWIFT 298
           MDT+VKVK+  + SK+VGIRV+C+GIK + P+GK+P+VASVSDA CKVDLRIKIW +T
Sbjct: 218 MDTRVKVKMESLRSKRVGIRVTCQGIKAVAPKGKSPSVASVSDAKCKVDLRIKIWKWT 275

[Close]

BLAST of MELO3C016872.2.1 vs. TrEMBL
Match: tr|A0A2I4HUA1|A0A2I4HUA1_9ROSI (uncharacterized protein LOC109021512 OS=Juglans regia OX=51240 GN=LOC109021512 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 5.5e-57
Identity = 169/259 (65.25%), Postives = 203/259 (78.38%), Query Frame = 0


Query: 43  PDAAPKPSVNGAAT---TNGTIPPSSSKPNFRQHPYXXXXXXXXXXXXXXXXXXXXXXXX 102
           P + P  S+NG AT    N T P +  KP  RQ PY  XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 7   PSSKP-TSINGTATAGVNNTTTPAAPVKPQLRQ-PYRHXXXXXXXXXXXXXXXXXXXXXX 66

Query: 103 XXXXXXXXXXXXXXXXXAALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNL 162
           XXXXXXXXXXXX      ALYV+Y P RPQF++SSLRISKLNLTT+ DSS SH+SSL NL
Sbjct: 67  XXXXXXXXXXXXVSIAGVALYVIYHPQRPQFSVSSLRISKLNLTTTADSS-SHVSSLLNL 126

Query: 163 TLSSFNPNSHITFSYDPFLISTF-SNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDA 222
           TL S NPNS ITF YDPF++S   S+SV +ANGSIPAF+S  KN+T FRT+++ + DLD 
Sbjct: 127 TLFSKNPNSQITFFYDPFVLSCLSSHSVQIANGSIPAFVSDKKNETTFRTILAASRDLDT 186

Query: 223 DSVTSLRSDLKKRGGTPLTIEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVA 282
           DSVT+LRSDLK++ G P+ I+MDT+VKVK+G + S KVGIRV+C+GI G+ P+ K+P+VA
Sbjct: 187 DSVTALRSDLKRKNGVPMKIQMDTEVKVKLGGMKSNKVGIRVTCQGINGVAPKSKSPSVA 246

Query: 283 SVSDADCKVDLRIKIWIFT 298
           SVS + CKVDLRIKIW +T
Sbjct: 247 SVSASKCKVDLRIKIWKWT 262

The following BLAST results are available for this feature:

BLAST of MELO3C016872.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452726.1	3.6e-108	100.00	PREDICTED: uncharacterized protein At1g08160 [Cucumis melo]	[more]
XP_022977096.1	1.7e-86	83.14	NDR1/HIN1-like protein 6 [Cucurbita maxima]	[more]
XP_022936399.1	5.2e-83	90.11	NDR1/HIN1-like protein 6 [Cucurbita moschata] >XP_022936400.1 NDR1/HIN1-like pro...	[more]
XP_023535537.1	5.2e-83	90.11	NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo]	[more]
XP_023523397.1	7.8e-79	78.49	NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C016872.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11890.1	1.0e-40	48.90	FUNCTIONS IN: molecular_function unknown	[more]
AT1G17620.1	1.8e-29	42.62	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G65690.1	1.0e-11	30.46	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G36970.1	1.3e-11	31.72	NDR1/HIN1-like 25	[more]
AT2G27080.1	1.7e-11	30.20	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

BLAST of MELO3C016872.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LD98\|NHL6_ARATH	1.8e-10	30.46	NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1	[more]
sp\|Q9ZVD2\|NHL13_ARATH	3.1e-10	30.20	NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1	[more]
sp\|Q9FI03\|NHL26_ARATH	1.1e-07	27.91	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
sp\|Q9SJ54\|NHL12_ARATH	7.3e-04	26.03	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]

BLAST of MELO3C016872.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BVB2\|A0A1S3BVB2_CUCME	2.4e-108	100.00	uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103493662 PE=4 S...	[more]
tr\|A0A0A0L2R4\|A0A0A0L2R4_CUCSA	3.3e-78	88.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646080 PE=4 SV=1	[more]
tr\|A0A2N9F759\|A0A2N9F759_FAGSY	3.5e-59	66.12	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10850 PE=4 SV=1	[more]
tr\|A0A2P5C5N4\|A0A2P5C5N4_PARAD	2.5e-57	65.17	Late embryogenesis abundant protein OS=Parasponia andersonii OX=3476 GN=PanWU01x...	[more]
tr\|A0A2I4HUA1\|A0A2I4HUA1_9ROSI	5.5e-57	65.25	uncharacterized protein LOC109021512 OS=Juglans regia OX=51240 GN=LOC109021512 P...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C016872.2	MELO3C016872.2	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C016872.2.1.five_prime_UTR.1	MELO3C016872.2.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C016872.2.1.CDS.1	MELO3C016872.2.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C016872.2.1.three_prime_UTR.1	MELO3C016872.2.1.three_prime_UTR.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C016872.2.1.exon.1	MELO3C016872.2.1.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C016872.2.1	MELO3C016872.2.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 161..262 e-value: 8.2E-9 score: 35.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..76
None	No IPR available	PANTHER	PTHR31234:SF6	SUBFAMILY NOT NAMED	coord: 46..297
None	No IPR available	PANTHER	PTHR31234	FAMILY NOT NAMED	coord: 46..297