MELO3C016676T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C016676T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Peptide methionine sulfoxide reductase msrB
Location	chr7 : 2922430 .. 2923682 (-)
Sequence length	663

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCTCCCCCTCGGGCCTCCTCTGGTGAGTACTTGAGTCAAAACTAAAAGCCCAAGTTCCTTTTAATGTCGACAATGGCTGCCAGAAGTTTGAATTTATCGATTCTTCCAACTGGGTTTATTAGTACTTCAAAAACCCAACAAAGCTTCAACTTTCTTTCTTTTTCTTCTCCTCCAGGTTTCAGAGCAATCAAAAACAAAAAGCTTTCATCATTTTCTACCAGAGTAATGGGCTCTTCCTCCTCTTCCCAGAAACCAGATGGCATCAAAGGTTTTTCCTTTTCCTTTATGAACTTGTGATTTACTAAATATTGGTCTATGATATAATGAATTAAGTAATGATTATCAATGGTGTGGCATGAGAAAATTTACATAGAGAATTTGTCTTACCAATTTGATGGTGTGAATGGCTTTGATATTGACCATTGAAGAAGCTTAGTTGCCTGTTGGTGCAGAGGCTGGCACCGTCGATTACAAATCTTTAAGCGATGATGAATGGAAGAAGCGGCTCACGGGAGAGCAGTTTTATATTACCCGTCAGAAGGGCACTGAGAGAGCTTTTACTGGGTATGCTTCAATGAATATCTTCAACATAAAACACCTATGTGGTCGCAGTTCTGATCCTTTGTTAACTTTTTTCTTCAATTTCAGTGAGTATTGGAACACCAAAACGGCAGGGCTATACCACTGTATATGTTGTGACACACCTCTGTTTGAGTAAATATTTTGACTCTTTTTGTAACTTCTCTCTGCTGCTGTTATTTCATAGAACTTCCAATAATGGTGTGACATTCTCTCTTTCAGATCATCTACTAAATTTGACAGTGGAACTGGTTGGCCATCATATTACCAACCTATTGGTGATAATGTCAAATCCAAGCTAGACCTTTCCATCATTTTCATGCCTAGAGAGGAAGTTCTTTGTGCTGTCTGTGATGCTCATCTGGGCCATGTATTTGACGATGGACCGCCGCCAACTGGAAAACGTTACTGCATCAATAGGTAAGTTGATGTTGCTGGCGTGCTTGTGTGTTTAACTACCTGCTGGTTGTCAGAACTGACTTGTAAATGAAACTTTCTGCAGTGCGGCACTGAAATTGAAGCCAGATAAGTGATGATGAAGATATTACCATACCTGCCTGCAAATTATGTAACTGAAACCCGTACTCATTACATGTTTGTGCTTATAAACTGAGGATTCTCGAGAGATGTACACGTTTATTGGGCTGAATGAAAATAATTGTATTGGGCTGT

mRNA sequence

ACCCTCCCCCTCGGGCCTCCTCTGGTTTCAGAGCAATCAAAAACAAAAAGCTTTCATCATTTTCTACCAGAGTAATGGGCTCTTCCTCCTCTTCCCAGAAACCAGATGGCATCAAAGAGGCTGGCACCGTCGATTACAAATCTTTAAGCGATGATGAATGGAAGAAGCGGCTCACGGGAGAGCAGTTTTATATTACCCGTCAGAAGGGCACTGAGAGAGCTTTTACTGGTGAGTATTGGAACACCAAAACGGCAGGGCTATACCACTGTATATGTTGTGACACACCTCTGTTTGAATCATCTACTAAATTTGACAGTGGAACTGGTTGGCCATCATATTACCAACCTATTGGTGATAATGTCAAATCCAAGCTAGACCTTTCCATCATTTTCATGCCTAGAGAGGAAGTTCTTTGTGCTGTCTGTGATGCTCATCTGGGCCATGTATTTGACGATGGACCGCCGCCAACTGGAAAACGTTACTGCATCAATAGTGCGGCACTGAAATTGAAGCCAGATAAGTGATGATGAAGATATTACCATACCTGCCTGCAAATTATGTAACTGAAACCCGTACTCATTACATGTTTGTGCTTATAAACTGAGGATTCTCGAGAGATGTACACGTTTATTGGGCTGAATGAAAATAATTGTATTGGGCTGT

Coding sequence (CDS)

ATGGGCTCTTCCTCCTCTTCCCAGAAACCAGATGGCATCAAAGAGGCTGGCACCGTCGATTACAAATCTTTAAGCGATGATGAATGGAAGAAGCGGCTCACGGGAGAGCAGTTTTATATTACCCGTCAGAAGGGCACTGAGAGAGCTTTTACTGGTGAGTATTGGAACACCAAAACGGCAGGGCTATACCACTGTATATGTTGTGACACACCTCTGTTTGAATCATCTACTAAATTTGACAGTGGAACTGGTTGGCCATCATATTACCAACCTATTGGTGATAATGTCAAATCCAAGCTAGACCTTTCCATCATTTTCATGCCTAGAGAGGAAGTTCTTTGTGCTGTCTGTGATGCTCATCTGGGCCATGTATTTGACGATGGACCGCCGCCAACTGGAAAACGTTACTGCATCAATAGTGCGGCACTGAAATTGAAGCCAGATAAGTGA

Protein sequence

MGSSSSSQKPDGIKEAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGLYHCICCDTPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDGPPPTGKRYCINSAALKLKPDK*

Homology

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BLAST of MELO3C016676T1 vs. Swiss-Prot
Match: MSRB1_ARATH (Peptide methionine sulfoxide reductase B1, chloroplastic OS=Arabidopsis thaliana GN=MSRB1 PE=1 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 1.9e-69
Identity = 118/145 (81.38%), Postives = 134/145 (92.41%), Query Frame = 1


Query: 1   MGSSSSSQKPDGIKEAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTA 60
           MGSSSSS KPD ++EA   ++ SLS++EWKKRLT EQ+YITRQKGTERAFTGEYWN+KT 
Sbjct: 50  MGSSSSSPKPDNVQEAEKNEFASLSENEWKKRLTPEQYYITRQKGTERAFTGEYWNSKTP 109

Query: 61  GLYHCICCDTPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAH 120
           G+Y+C+CCDTPLF+SSTKFDSGTGWPSYYQPIG+NVK+KLDLSIIFMPR+EV+CAVC+AH
Sbjct: 110 GVYNCVCCDTPLFDSSTKFDSGTGWPSYYQPIGNNVKTKLDLSIIFMPRQEVVCAVCNAH 169

Query: 121 LGHVFDDGPPPTGKRYCINSAALKL 146
           LGHVFDDGP PTGKRYC+NSAALKL
Sbjct: 170 LGHVFDDGPRPTGKRYCLNSAALKL 194

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BLAST of MELO3C016676T1 vs. Swiss-Prot
Match: MSRB1_ORYSJ (Peptide methionine sulfoxide reductase B1, chloroplastic OS=Oryza sativa subsp. japonica GN=MSRB1 PE=2 SV=2)

HSP 1 Score: 255.8 bits (652), Expect = 3.0e-67
Identity = 120/148 (81.08%), Postives = 129/148 (87.16%), Query Frame = 1


Query: 3   SSSSSQKPDGIKEA---GTVDYK-SLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTK 62
           SSSSS  P G  +A   G  +Y  SL+D+EW+KRLT +Q+YITRQKGTERAFTGEYWNTK
Sbjct: 64  SSSSSPSPQGQAQAQAQGKPNYSTSLTDEEWRKRLTKDQYYITRQKGTERAFTGEYWNTK 123

Query: 63  TAGLYHCICCDTPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCD 122
           T G+YHC+CCDTPLFESSTKFDSGTGWPSYYQPIGDNVK KLD+SIIFMPR EVLCAVCD
Sbjct: 124 TPGIYHCVCCDTPLFESSTKFDSGTGWPSYYQPIGDNVKCKLDMSIIFMPRTEVLCAVCD 183

Query: 123 AHLGHVFDDGPPPTGKRYCINSAALKLK 147
           AHLGHVFDDGP PTGKRYCINSA+LKLK
Sbjct: 184 AHLGHVFDDGPRPTGKRYCINSASLKLK 211

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BLAST of MELO3C016676T1 vs. Swiss-Prot
Match: MSRB_THEEB (Peptide methionine sulfoxide reductase MsrB OS=Thermosynechococcus elongatus (strain BP-1) GN=msrB PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 8.5e-46
Identity = 84/125 (67.20%), Postives = 99/125 (79.20%), Query Frame = 1


Query: 25  SDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGLYHCICCDTPLFESSTKFDSGTG 84
           +D EW+ +LT EQ+Y+TR+KGTERAFTG YWN K  GLY C+CC TPLF S TK+DSGTG
Sbjct: 7   TDAEWQAQLTPEQYYVTRKKGTERAFTGCYWNNKKPGLYSCVCCGTPLFRSETKYDSGTG 66

Query: 85  WPSYYQPIG-DNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDGPPPTGKRYCINSAAL 144
           WPS++QP+  +N++ + DLS   M R EVLCAVCDAHLGHVF+DGPPPTG RYCINSAAL
Sbjct: 67  WPSFWQPLDPNNIRMERDLS-HGMVRTEVLCAVCDAHLGHVFEDGPPPTGLRYCINSAAL 126

Query: 145 KLKPD 149
              P+
Sbjct: 127 AFVPE 130

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BLAST of MELO3C016676T1 vs. Swiss-Prot
Match: MSRB_ACAM1 (Peptide methionine sulfoxide reductase MsrB OS=Acaryochloris marina (strain MBIC 11017) GN=msrB PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 2.8e-41
Identity = 80/124 (64.52%), Postives = 92/124 (74.19%), Query Frame = 1


Query: 25  SDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGLYHCICCDTPLFESSTKFDSGTG 84
           ++ EW+ +LT EQF +TR  GTERAFTGEY + K AG Y C+CC T LF S TKFDSGTG
Sbjct: 7   TEQEWEAQLTPEQFRVTRHHGTERAFTGEYHDLKAAGTYQCVCCGTELFTSDTKFDSGTG 66

Query: 85  WPSYYQPIGD-NVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDGPPPTGKRYCINSAAL 144
           WPS++ P    +V+ K D S+ FM R EVLCAVCDAHLGHVF+DGP PTG RYC+NSAAL
Sbjct: 67  WPSFWAPADKTHVEEKTDRSL-FMVRTEVLCAVCDAHLGHVFNDGPKPTGLRYCMNSAAL 126

Query: 145 KLKP 148
           K  P
Sbjct: 127 KFVP 129

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BLAST of MELO3C016676T1 vs. Swiss-Prot
Match: MSRB2_MOUSE (Methionine-R-sulfoxide reductase B2, mitochondrial OS=Mus musculus GN=Msrb2 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.8e-40
Identity = 79/148 (53.38%), Postives = 99/148 (66.89%), Query Frame = 1


Query: 12  GIKEAG--TVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGLYHCICCD 71
           G K+ G  T   +SLS+ +W+K+LT EQFY+TR+KGTE  F+G Y N K  G+YHC+CCD
Sbjct: 28  GSKDTGSLTKSKRSLSEADWQKKLTPEQFYVTREKGTEAPFSGMYLNNKETGMYHCVCCD 87

Query: 72  TPLFESSTKFDSGTGWPSYYQPIGD--------NVKSKLDLSIIFMPREEVLCAVCDAHL 131
           +PLF S  K+ SGTGWPS+ +  G          +  +LD S +  PR EV+C  C+AHL
Sbjct: 88  SPLFSSEKKYCSGTGWPSFSEAYGSKGSDESHTGILRRLDTS-LGCPRMEVVCKQCEAHL 147

Query: 132 GHVFDDGPPPTGKRYCINSAALKLKPDK 150
           GHVF DGP PTG+R+CINS ALK KP K
Sbjct: 148 GHVFPDGPKPTGQRFCINSVALKFKPSK 174

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BLAST of MELO3C016676T1 vs. TrEMBL
Match: A0A0A0L4I4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G622800 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 8.8e-82
Identity = 143/147 (97.28%), Postives = 147/147 (100.00%), Query Frame = 1


Query: 3   SSSSSQKPDGIKEAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGL 62
           SSSSSQKPDGIKEAGTV+YKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAG+
Sbjct: 58  SSSSSQKPDGIKEAGTVNYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGI 117

Query: 63  YHCICCDTPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAHLG 122
           YHCICCDTPLFESSTKFDSGTGWPSYYQP+GDNVKSKLDLSIIFMPREEVLCAVCDAHLG
Sbjct: 118 YHCICCDTPLFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLG 177

Query: 123 HVFDDGPPPTGKRYCINSAALKLKPDK 150
           HVF+DGPPPTGKRYCINSAALKLKPDK
Sbjct: 178 HVFNDGPPPTGKRYCINSAALKLKPDK 204

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BLAST of MELO3C016676T1 vs. TrEMBL
Match: F2YS22_CARPA (Chloroplast methionine sulfoxide reductase B1 (Fragment) OS=Carica papaya PE=2 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 1.6e-75
Identity = 129/147 (87.76%), Postives = 141/147 (95.92%), Query Frame = 1


Query: 1   MGSSSSSQKPDGIKEAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTA 60
           MGSS+SSQKPD +++AG +DY S +DDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKT 
Sbjct: 51  MGSSASSQKPDSVQDAGKIDYASWTDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTP 110

Query: 61  GLYHCICCDTPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAH 120
           G YHCICCDTPLFESSTKFDSGTGWPSYY+P+G+NVKSKLDLSIIFMPR+EVLC+VCDAH
Sbjct: 111 GTYHCICCDTPLFESSTKFDSGTGWPSYYEPVGNNVKSKLDLSIIFMPRQEVLCSVCDAH 170

Query: 121 LGHVFDDGPPPTGKRYCINSAALKLKP 148
           LGHVFDDGPPPTGKRYCINSAAL+LKP
Sbjct: 171 LGHVFDDGPPPTGKRYCINSAALRLKP 197

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BLAST of MELO3C016676T1 vs. TrEMBL
Match: A0A067D491_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028408mg PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 2.1e-75
Identity = 131/147 (89.12%), Postives = 140/147 (95.24%), Query Frame = 1


Query: 1   MGSSSSSQKPDGIKEAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTA 60
           MGSS+SSQKPD I+EA  VDY S+SD+EWK+RLTGEQ+YITRQKGTERAFTGEYWNTKT 
Sbjct: 54  MGSSASSQKPDNIQEANRVDYASISDEEWKRRLTGEQYYITRQKGTERAFTGEYWNTKTP 113

Query: 61  GLYHCICCDTPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAH 120
           G YHCICCDTPLFESSTKFDSGTGWPSYYQPIG N+KSKLDLSIIFMPR+EVLCAVCDAH
Sbjct: 114 GTYHCICCDTPLFESSTKFDSGTGWPSYYQPIGSNMKSKLDLSIIFMPRQEVLCAVCDAH 173

Query: 121 LGHVFDDGPPPTGKRYCINSAALKLKP 148
           LGHVFDDGPPPTGKRYCINSA+LKLKP
Sbjct: 174 LGHVFDDGPPPTGKRYCINSASLKLKP 200

[Close]

BLAST of MELO3C016676T1 vs. TrEMBL
Match: V4TUN1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022321mg PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 3.6e-75
Identity = 132/147 (89.80%), Postives = 139/147 (94.56%), Query Frame = 1


Query: 1   MGSSSSSQKPDGIKEAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTA 60
           MGSS+SSQKPD I+EA  VDY S+SD+EWK RLTGEQ+YITRQKGTERAFTGEYWNTKTA
Sbjct: 54  MGSSASSQKPDNIQEANRVDYASISDEEWKGRLTGEQYYITRQKGTERAFTGEYWNTKTA 113

Query: 61  GLYHCICCDTPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAH 120
           G YHCICCDTPLFESSTKFDSGTGWPSYYQPIG NVKSKLDLSIIFMPR+EVLCA CDAH
Sbjct: 114 GTYHCICCDTPLFESSTKFDSGTGWPSYYQPIGSNVKSKLDLSIIFMPRQEVLCAECDAH 173

Query: 121 LGHVFDDGPPPTGKRYCINSAALKLKP 148
           LGHVFDDGPPPTGKRYCINSA+LKLKP
Sbjct: 174 LGHVFDDGPPPTGKRYCINSASLKLKP 200

[Close]

BLAST of MELO3C016676T1 vs. TrEMBL
Match: F6H2J9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g00170 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 3.6e-75
Identity = 134/148 (90.54%), Postives = 140/148 (94.59%), Query Frame = 1


Query: 1   MGSS-SSSQKPDGIKEAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKT 60
           MGSS SSSQKPD I+E G VDY S+SD+EWKKRLTGEQFYITRQKGTERAFTGEYWNTKT
Sbjct: 50  MGSSASSSQKPDSIQEPGKVDYTSISDEEWKKRLTGEQFYITRQKGTERAFTGEYWNTKT 109

Query: 61  AGLYHCICCDTPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDA 120
            G YHCICCDTPLFESSTKFDSGTGWPSYYQPIG+NVKSKLDLSIIFMPR+EVLCA CDA
Sbjct: 110 PGAYHCICCDTPLFESSTKFDSGTGWPSYYQPIGNNVKSKLDLSIIFMPRQEVLCAACDA 169

Query: 121 HLGHVFDDGPPPTGKRYCINSAALKLKP 148
           HLGHVFDDGPPPTGKRYCINSA+LKLKP
Sbjct: 170 HLGHVFDDGPPPTGKRYCINSASLKLKP 197

[Close]

BLAST of MELO3C016676T1 vs. TAIR10
Match: AT1G53670.1 (AT1G53670.1 methionine sulfoxide reductase B 1)

HSP 1 Score: 263.1 bits (671), Expect = 1.1e-70
Identity = 118/145 (81.38%), Postives = 134/145 (92.41%), Query Frame = 1


Query: 1   MGSSSSSQKPDGIKEAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTA 60
           MGSSSSS KPD ++EA   ++ SLS++EWKKRLT EQ+YITRQKGTERAFTGEYWN+KT 
Sbjct: 50  MGSSSSSPKPDNVQEAEKNEFASLSENEWKKRLTPEQYYITRQKGTERAFTGEYWNSKTP 109

Query: 61  GLYHCICCDTPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAH 120
           G+Y+C+CCDTPLF+SSTKFDSGTGWPSYYQPIG+NVK+KLDLSIIFMPR+EV+CAVC+AH
Sbjct: 110 GVYNCVCCDTPLFDSSTKFDSGTGWPSYYQPIGNNVKTKLDLSIIFMPRQEVVCAVCNAH 169

Query: 121 LGHVFDDGPPPTGKRYCINSAALKL 146
           LGHVFDDGP PTGKRYC+NSAALKL
Sbjct: 170 LGHVFDDGPRPTGKRYCLNSAALKL 194

[Close]

BLAST of MELO3C016676T1 vs. TAIR10
Match: AT4G04830.1 (AT4G04830.1 methionine sulfoxide reductase B5)

HSP 1 Score: 113.6 bits (283), Expect = 1.0e-25
Identity = 54/127 (42.52%), Postives = 77/127 (60.63%), Query Frame = 1


Query: 25  SDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGLYHCICCDTPLFESSTKFDSGTG 84
           +++EW+  L+ EQF I RQKGTE+  TGEY      G++ C+ C TPL++S+TKFDSG G
Sbjct: 11  TEEEWRAVLSPEQFRILRQKGTEKPGTGEYDKFFEEGIFDCVGCKTPLYKSTTKFDSGCG 70

Query: 85  WPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSAA 144
           WP++++ +   +    D       R E+ CA CD HLGHVF  +    PT +R+C+NS +
Sbjct: 71  WPAFFEGLPGAINRTPDPD---GRRTEITCAACDGHLGHVFKGEGYGNPTDERHCVNSVS 130

Query: 145 LKLKPDK 150
           +   P K
Sbjct: 131 ISFNPAK 134

[Close]

BLAST of MELO3C016676T1 vs. TAIR10
Match: AT4G04800.1 (AT4G04800.1 methionine sulfoxide reductase B3)

HSP 1 Score: 112.1 bits (279), Expect = 3.0e-25
Identity = 55/124 (44.35%), Postives = 75/124 (60.48%), Query Frame = 1


Query: 26  DDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGLYHCICCDTPLFESSTKFDSGTGW 85
           D+EW+  L+ EQF I RQKGTE   TGEY N    G+Y C+ C+ PL++S+TKF++G GW
Sbjct: 51  DEEWRAILSPEQFRILRQKGTEYPGTGEYVNFDKEGVYGCVGCNAPLYKSTTKFNAGCGW 110

Query: 86  PSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSAAL 145
           P++++ I   +    D       R E+ CA C  HLGHVF  +    PT +R+C+NS +L
Sbjct: 111 PAFFEGIPGAITRTTDPD---GRRIEINCATCGGHLGHVFKGEGFATPTDERHCVNSVSL 170

Query: 146 KLKP 148
           K  P
Sbjct: 171 KFTP 171

[Close]

BLAST of MELO3C016676T1 vs. TAIR10
Match: AT4G21860.1 (AT4G21860.1 methionine sulfoxide reductase B 2)

HSP 1 Score: 112.1 bits (279), Expect = 3.0e-25
Identity = 56/125 (44.80%), Postives = 74/125 (59.20%), Query Frame = 1


Query: 26  DDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGLYHCICCDTPLFESSTKFDSGTGW 85
           ++EW+  L+ EQF I RQKGTE   TGEY      G+Y C  C TPL++S+TKFDSG GW
Sbjct: 77  EEEWRAILSPEQFRILRQKGTEYPGTGEYNKVFDDGIYCCAGCGTPLYKSTTKFDSGCGW 136

Query: 86  PSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSAAL 145
           P+++  +   +    D       R E+ CA C  HLGHVF  +  P PT +R+C+NS +L
Sbjct: 137 PAFFDGLPGAITRTPDPD---GRRIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSISL 196

Query: 146 KLKPD 149
           K  P+
Sbjct: 197 KFTPE 198

[Close]

BLAST of MELO3C016676T1 vs. TAIR10
Match: AT4G21850.1 (AT4G21850.1 methionine sulfoxide reductase B9)

HSP 1 Score: 108.2 bits (269), Expect = 4.4e-24
Identity = 53/121 (43.80%), Postives = 71/121 (58.68%), Query Frame = 1


Query: 26  DDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGLYHCICCDTPLFESSTKFDSGTGW 85
           D +W+  L+ EQF + R+KGTE    GEY      G+Y C  C TPL++S+TKFDSG GW
Sbjct: 19  DQDWRAILSPEQFRVLREKGTENRGKGEYTKLFDDGIYSCAGCATPLYKSTTKFDSGCGW 78

Query: 86  PSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSAAL 145
           PS++  I   +K   +       R E+ CA CD HLGHV   +  P  T +R+C+NS +L
Sbjct: 79  PSFFDAIPGAIKQTPEAG---GRRMEITCAACDGHLGHVVKGEGFPTATDERHCVNSVSL 136

[Close]

BLAST of MELO3C016676T1 vs. NCBI nr
Match: gi|659103010|ref|XP_008452427.1| (PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 320.1 bits (819), Expect = 2.1e-84
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MGSSSSSQKPDGIKEAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTA 60
           MGSSSSSQKPDGIKEAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTA
Sbjct: 55  MGSSSSSQKPDGIKEAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTA 114

Query: 61  GLYHCICCDTPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAH 120
           GLYHCICCDTPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAH
Sbjct: 115 GLYHCICCDTPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAH 174

Query: 121 LGHVFDDGPPPTGKRYCINSAALKLKPDK 150
           LGHVFDDGPPPTGKRYCINSAALKLKPDK
Sbjct: 175 LGHVFDDGPPPTGKRYCINSAALKLKPDK 203

[Close]

BLAST of MELO3C016676T1 vs. NCBI nr
Match: gi|778695599|ref|XP_004146010.2| (PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 1.3e-81
Identity = 143/147 (97.28%), Postives = 147/147 (100.00%), Query Frame = 1


Query: 3   SSSSSQKPDGIKEAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGL 62
           SSSSSQKPDGIKEAGTV+YKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAG+
Sbjct: 58  SSSSSQKPDGIKEAGTVNYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGI 117

Query: 63  YHCICCDTPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAHLG 122
           YHCICCDTPLFESSTKFDSGTGWPSYYQP+GDNVKSKLDLSIIFMPREEVLCAVCDAHLG
Sbjct: 118 YHCICCDTPLFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLG 177

Query: 123 HVFDDGPPPTGKRYCINSAALKLKPDK 150
           HVF+DGPPPTGKRYCINSAALKLKPDK
Sbjct: 178 HVFNDGPPPTGKRYCINSAALKLKPDK 204

[Close]

BLAST of MELO3C016676T1 vs. NCBI nr
Match: gi|659103012|ref|XP_008452428.1| (PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 293.9 bits (751), Expect = 1.6e-76
Identity = 138/144 (95.83%), Postives = 140/144 (97.22%), Query Frame = 1


Query: 6   SSQKPDGIKEAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGLYHC 65
           +S+ P G  EAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGLYHC
Sbjct: 2   ASKLPVGA-EAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGLYHC 61

Query: 66  ICCDTPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVF 125
           ICCDTPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVF
Sbjct: 62  ICCDTPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVF 121

Query: 126 DDGPPPTGKRYCINSAALKLKPDK 150
           DDGPPPTGKRYCINSAALKLKPDK
Sbjct: 122 DDGPPPTGKRYCINSAALKLKPDK 144

[Close]

BLAST of MELO3C016676T1 vs. NCBI nr
Match: gi|327387767|gb|AEA72443.1| (chloroplast methionine sulfoxide reductase B1, partial [Carica papaya])

HSP 1 Score: 290.0 bits (741), Expect = 2.3e-75
Identity = 129/147 (87.76%), Postives = 141/147 (95.92%), Query Frame = 1


Query: 1   MGSSSSSQKPDGIKEAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTA 60
           MGSS+SSQKPD +++AG +DY S +DDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKT 
Sbjct: 51  MGSSASSQKPDSVQDAGKIDYASWTDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTP 110

Query: 61  GLYHCICCDTPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAH 120
           G YHCICCDTPLFESSTKFDSGTGWPSYY+P+G+NVKSKLDLSIIFMPR+EVLC+VCDAH
Sbjct: 111 GTYHCICCDTPLFESSTKFDSGTGWPSYYEPVGNNVKSKLDLSIIFMPRQEVLCSVCDAH 170

Query: 121 LGHVFDDGPPPTGKRYCINSAALKLKP 148
           LGHVFDDGPPPTGKRYCINSAAL+LKP
Sbjct: 171 LGHVFDDGPPPTGKRYCINSAALRLKP 197

[Close]

BLAST of MELO3C016676T1 vs. NCBI nr
Match: gi|641814122|gb|KDO37774.1| (hypothetical protein CISIN_1g028408mg [Citrus sinensis])

HSP 1 Score: 289.7 bits (740), Expect = 3.0e-75
Identity = 131/147 (89.12%), Postives = 140/147 (95.24%), Query Frame = 1


Query: 1   MGSSSSSQKPDGIKEAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTA 60
           MGSS+SSQKPD I+EA  VDY S+SD+EWK+RLTGEQ+YITRQKGTERAFTGEYWNTKT 
Sbjct: 54  MGSSASSQKPDNIQEANRVDYASISDEEWKRRLTGEQYYITRQKGTERAFTGEYWNTKTP 113

Query: 61  GLYHCICCDTPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAH 120
           G YHCICCDTPLFESSTKFDSGTGWPSYYQPIG N+KSKLDLSIIFMPR+EVLCAVCDAH
Sbjct: 114 GTYHCICCDTPLFESSTKFDSGTGWPSYYQPIGSNMKSKLDLSIIFMPRQEVLCAVCDAH 173

Query: 121 LGHVFDDGPPPTGKRYCINSAALKLKP 148
           LGHVFDDGPPPTGKRYCINSA+LKLKP
Sbjct: 174 LGHVFDDGPPPTGKRYCINSASLKLKP 200

The following BLAST results are available for this feature:

BLAST of MELO3C016676T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MSRB1_ARATH	1.9e-69	81.38	Peptide methionine sulfoxide reductase B1, chloroplastic OS=Arabidopsis thaliana...	[more]
MSRB1_ORYSJ	3.0e-67	81.08	Peptide methionine sulfoxide reductase B1, chloroplastic OS=Oryza sativa subsp. ...	[more]
MSRB_THEEB	8.5e-46	67.20	Peptide methionine sulfoxide reductase MsrB OS=Thermosynechococcus elongatus (st...	[more]
MSRB_ACAM1	2.8e-41	64.52	Peptide methionine sulfoxide reductase MsrB OS=Acaryochloris marina (strain MBIC...	[more]
MSRB2_MOUSE	1.8e-40	53.38	Methionine-R-sulfoxide reductase B2, mitochondrial OS=Mus musculus GN=Msrb2 PE=1...	[more]

BLAST of MELO3C016676T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4I4_CUCSA	8.8e-82	97.28	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G622800 PE=4 SV=1	[more]
F2YS22_CARPA	1.6e-75	87.76	Chloroplast methionine sulfoxide reductase B1 (Fragment) OS=Carica papaya PE=2 S...	[more]
A0A067D491_CITSI	2.1e-75	89.12	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028408mg PE=4 SV=1	[more]
V4TUN1_9ROSI	3.6e-75	89.80	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022321mg PE=4 SV=1	[more]
F6H2J9_VITVI	3.6e-75	90.54	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g00170 PE=4 SV=...	[more]

BLAST of MELO3C016676T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53670.1	1.1e-70	81.38	methionine sulfoxide reductase B 1	[more]
AT4G04830.1	1.0e-25	42.52	methionine sulfoxide reductase B5	[more]
AT4G04800.1	3.0e-25	44.35	methionine sulfoxide reductase B3	[more]
AT4G21860.1	3.0e-25	44.80	methionine sulfoxide reductase B 2	[more]
AT4G21850.1	4.4e-24	43.80	methionine sulfoxide reductase B9	[more]

BLAST of MELO3C016676T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659103010\|ref\|XP_008452427.1\|	2.1e-84	100.00	PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic isoform X1 [...	[more]
gi\|778695599\|ref\|XP_004146010.2\|	1.3e-81	97.28	PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic isoform X1 [...	[more]
gi\|659103012\|ref\|XP_008452428.1\|	1.6e-76	95.83	PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic isoform X2 [...	[more]
gi\|327387767\|gb\|AEA72443.1\|	2.3e-75	87.76	chloroplast methionine sulfoxide reductase B1, partial [Carica papaya]	[more]
gi\|641814122\|gb\|KDO37774.1\|	3.0e-75	89.12	hypothetical protein CISIN_1g028408mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002579	Met_Sox_Rdtase_MsrB
IPR011057	Mss4-like_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0006979	response to oxidative stress
GO:0030091	protein repair
GO:0055114	oxidation-reduction process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
GO:0033743	peptide-methionine (R)-S-oxide reductase activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0030091	protein repair
biological_process	GO:0006979	response to oxidative stress
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0033743	peptide-methionine (R)-S-oxide reductase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C016676	MELO3C016676	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C016676T1	MELO3C016676T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C016676T1.cds5	MELO3C016676T1.cds5	CDS
MELO3C016676T1.cds4	MELO3C016676T1.cds4	CDS
MELO3C016676T1.cds3	MELO3C016676T1.cds3	CDS
MELO3C016676T1.cds2	MELO3C016676T1.cds2	CDS
MELO3C016676T1.cds1	MELO3C016676T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002579	Peptide methionine sulphoxide reductase MrsB	GENE3D	G3DSA:2.170.150.20		coord: 22..148 score: 1.5
IPR002579	Peptide methionine sulphoxide reductase MrsB	PFAM	PF01641	SelR	coord: 28..147 score: 4.2
IPR002579	Peptide methionine sulphoxide reductase MrsB	TIGRFAMs	TIGR00357	TIGR00357	coord: 24..147 score: 2.4
IPR011057	Mss4-like	unknown	SSF51316	Mss4-like	coord: 24..148 score: 4.71
None	No IPR available	PANTHER	PTHR10173:SF38	PEPTIDE METHIONINE SULFOXIDE REDUCTASE B1, CHLOROPLASTIC	coord: 1..148 score: 5.9E