MELO3C015630.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C015630.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Late embryogenesis abundant protein
Location	chr02 : 3555696 .. 3556518 (-)
Sequence length	638

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACAACCCTCTCTCTCTCTCTCCCTCCGCCTCCCATGGCTGACCGCGTCCATCCCACCGTCGATTCCCCCCGTCCCAGCACCTCCTCCACCCTCTCCGACACCACCAAACCTCCCTCTCCACCTCCCGGCACCTACGTCATCCAGCTCCCCAAAGACCAAATCTACCGCGTTCCTCCTCCCGAAAACGCCCACCGCTTCCAACTCTACACTCGCCAAAACCGCCGCCGCCGCAACCCCTGCCGCTCCTGCCTTTTCTGCCTTCTCGCCATCCTCATCCTCCTCATCATCCTTCTAGGCATCACCGTCGCCGTTTTCTACTTAGTCGTTCGCCCTAAATCACCTAACTACTCCATCGACGCCATTTCCGTTTCCGGACTCAACTTATTAACATCCTTTCCTCCTCCTCCGCGATCTCGCCTCTATTCAATCTGACTGTTCGAGCGGATAATCCGAATAAGAAGATCGGAATCTATTACTTAACAGGTAGCTCAGTTCGAATATATTTCTCAAACGAGAAACTTTCGGAGGGTGTTTTGCCTGATTTTTTTCAGCCTGCGAAGAATGTGAGTGTGCTTAGATCTGTTGTGAGAGGAACGGGTGTTAATTTGTCGAGTGGGGCGAAGAATGGGTTGATTGAATCGGTGAAACAGAGGGTGGTGGTGTTGAAGGTTGAGATTGGAGTTCCGATTAAGGTGAAAGTTGGAGCGGTGAAGAGCTGGAAGATGAGAGTGAAGGTGAATTGTGATGTGACGGTGGATGAGTTGACGACGGCGGCGAAGATCGTTAAGAAGAATTGCGATTATAGTGTGAAGATTTGGTAG

mRNA sequence

TCACAACCCTCTCTCTCTCTCTCCCTCCGCCTCCCATGGCTGACCGCGTCCATCCCACCGTCGATTCCCCCCGTCCCAGCACCTCCTCCACCCTCTCCGACACCACCAAACCTCCCTCTCCACCTCCCGGCACCTACGTCATCCAGCTCCCCAAAGACCAAATCTACCGCGTTCCTCCTCCCGAAAACGCCCACCGCTTCCAACTCTACACTCGCCAAAACCGCCGCCGCCGCAACCCCTGCCGCTCCTGCCTTTTCTGCCTTCTCGCCATCCTCATCCTCCTCATCATCCTTCTAGGCATCACCGTCGCCGTTTTCTACTTAGTCGTTCGCCCTAAATCACCTAACTACTCCATCGACGCCATTTCCCCTGCGAAGAATGTGAGTGTGCTTAGATCTGTTGTGAGAGGAACGGGTGTTAATTTGTCGAGTGGGGCGAAGAATGGGTTGATTGAATCGGTGAAACAGAGGGTGGTGGTGTTGAAGGTTGAGATTGGAGTTCCGATTAAGGTGAAAGTTGGAGCGGTGAAGAGCTGGAAGATGAGAGTGAAGGTGAATTGTGATGTGACGGTGGATGAGTTGACGACGGCGGCGAAGATCGTTAAGAAGAATTGCGATTATAGTGTGAAGATTTGGTAG

Coding sequence (CDS)

ATGGCTGACCGCGTCCATCCCACCGTCGATTCCCCCCGTCCCAGCACCTCCTCCACCCTCTCCGACACCACCAAACCTCCCTCTCCACCTCCCGGCACCTACGTCATCCAGCTCCCCAAAGACCAAATCTACCGCGTTCCTCCTCCCGAAAACGCCCACCGCTTCCAACTCTACACTCGCCAAAACCGCCGCCGCCGCAACCCCTGCCGCTCCTGCCTTTTCTGCCTTCTCGCCATCCTCATCCTCCTCATCATCCTTCTAGGCATCACCGTCGCCGTTTTCTACTTAGTCGTTCGCCCTAAATCACCTAACTACTCCATCGACGCCATTTCCCCTGCGAAGAATGTGAGTGTGCTTAGATCTGTTGTGAGAGGAACGGGTGTTAATTTGTCGAGTGGGGCGAAGAATGGGTTGATTGAATCGGTGAAACAGAGGGTGGTGGTGTTGAAGGTTGAGATTGGAGTTCCGATTAAGGTGAAAGTTGGAGCGGTGAAGAGCTGGAAGATGAGAGTGAAGGTGAATTGTGATGTGACGGTGGATGAGTTGACGACGGCGGCGAAGATCGTTAAGAAGAATTGCGATTATAGTGTGAAGATTTGGTAG

Protein sequence

MADRVHPTVDSPRPSTSSTLSDTTKPPSPPPGTYVIQLPKDQIYRVPPPENAHRFQLYTRQNRRRRNPCRSCLFCLLAILILLIILLGITVAVFYLVVRPKSPNYSIDAISPAKNVSVLRSVVRGTGVNLSSGAKNGLIESVKQRVVVLKVEIGVPIKVKVGAVKSWKMRVKVNCDVTVDELTTAAKIVKKNCDYSVKIW

Homology

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BLAST of MELO3C015630.2.1 vs. NCBI nr
Match: XP_008451090.1 (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 296.2 bits (757), Expect = 8.3e-77
Identity = 199/261 (76.25%), Postives = 199/261 (76.25%), Query Frame = 0


Query: 1   MADRVHPTVDSPRPSTSSTLSDTTKPPSPPPGTYVIQLPKDQIYRVPPPENAHRFQLYTR 60
           MADRVHPTVDSPRPSTSSTLSDTTKPPSPPPGTYVIQLPKDQIYRVPPPENAHRFQLYTR
Sbjct: 1   MADRVHPTVDSPRPSTSSTLSDTTKPPSPPPGTYVIQLPKDQIYRVPPPENAHRFQLYTR 60

Query: 61  QXXXXXXXXXXXXXXXXXXXXXXXXXXGITVAVFYLVVRPKSPNYSIDAIS--------- 120
           QXXXXXXXXXXXXXXXXXXXXXXXXXX ITVAVFYLVVRPKSPNYSIDAIS         
Sbjct: 61  QXXXXXXXXXXXXXXXXXXXXXXXXXXXITVAVFYLVVRPKSPNYSIDAISVSGLNLLTS 120

Query: 121 ----------------------------------------------------PAKNVSVL 180
                                                               PAKNVSVL
Sbjct: 121 SSSSAISPLFNLTVRADNPNKKIGIYYLTGSSVRIYFSNEKLSEGVLPDFFQPAKNVSVL 180

Query: 181 RSVVRGTGVNLSSGAKNGLIESVKQRVVVLKVEIGVPIKVKVGAVKSWKMRVKVNCDVTV 201
           RSVVRGTGVNLSSGAKNGLIESVKQRVVVLKVEIGVPIKVKVGAVKSWKMRVKVNCDVTV
Sbjct: 181 RSVVRGTGVNLSSGAKNGLIESVKQRVVVLKVEIGVPIKVKVGAVKSWKMRVKVNCDVTV 240

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BLAST of MELO3C015630.2.1 vs. NCBI nr
Match: XP_004144152.1 (PREDICTED: protein YLS9-like [Cucumis sativus] >KGN66410.1 hypothetical protein Csa_1G601000 [Cucumis sativus])

HSP 1 Score: 270.4 bits (690), Expect = 4.9e-69
Identity = 178/258 (68.99%), Postives = 189/258 (73.26%), Query Frame = 0


Query: 1   MADRVHPTVDSPRPSTSSTLSDTTKPPSPPPGTYVIQLPKDQIYRVPPPENAHRFQLYTR 60
           MADRVHPT DSPRPSTSSTLSDTTKP SPPPGTYVIQLPKDQIYR+PPPENAHRF+LYTR
Sbjct: 1   MADRVHPTADSPRPSTSSTLSDTTKPSSPPPGTYVIQLPKDQIYRLPPPENAHRFKLYTR 60

Query: 61  QXXXXXXXXXXXXXXXXXXXXXXXXXXGITVAVFYLVVRPKSPNYSIDAIS--------- 120
           Q   XXXXXXXXXXXXXXXXXXXXXXXGIT+AVFY VVRPKSPNYSIDAIS         
Sbjct: 61  QSHRXXXXXXXXXXXXXXXXXXXXXXXGITLAVFYFVVRPKSPNYSIDAISISGLNNLTS 120

Query: 121 -------------------------------------------------PAKNVSVLRSV 180
                                                            P+KNVSVLR+V
Sbjct: 121 SAISPVFNLSVRADNPNKKIGIYYLTGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAV 180

Query: 181 VRGTGVNLSSGAKNGLIESVKQRVVVLKVEIGVPIKVKVGAVKSWKMRVKVNCDVTVDEL 201
           VRG GVNLSSGAKN +IE VKQR V+LKVEIGVPIKVK+G+VKSWK++VKVNCDVTVDEL
Sbjct: 181 VRGAGVNLSSGAKNEIIEWVKQRAVLLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDEL 240

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BLAST of MELO3C015630.2.1 vs. NCBI nr
Match: XP_022988187.1 (NDR1/HIN1-like protein 13 [Cucurbita maxima])

HSP 1 Score: 209.5 bits (532), Expect = 1.0e-50
Identity = 147/266 (55.26%), Postives = 167/266 (62.78%), Query Frame = 0


Query: 1   MADRVHPTVDSPRPSTSSTLSDTTKP------PSPPPGTYVIQLPKDQIYRVPPPENAHR 60
           MADRVHP  +SPRPSTSS +SD+  P      PSP PGTYVIQLPKDQIYRVPPPENAHR
Sbjct: 1   MADRVHP-AESPRPSTSSAVSDSKPPSPSADKPSPAPGTYVIQLPKDQIYRVPPPENAHR 60

Query: 61  FQLYTRQXXXXXXXXXXXXXXXXXXXXXXXXXXGITVAVFYLVVRPKSPNYSIDAIS--- 120
           F+LYTR+        XXXXXXXXXXXXXXXXX GI VA+FYLVVRPKSPNYSIDAI+   
Sbjct: 61  FELYTRR-KNRRSRCXXXXXXXXXXXXXXXXXLGIAVAIFYLVVRPKSPNYSIDAIAIRG 120

Query: 121 ---------------------------------------------------------PAK 180
                                                                    PAK
Sbjct: 121 LNSTASSSSRISPVFDVAVRADNPNKKIGIYYQTGSSVQIYFSDEKLSDGVLPAFFQPAK 180

Query: 181 NVSVLRSVVRGTGVNLSSGAKNGLIESVKQRVVVLKVEIGVPIKVKVGAVKSWKMRVKVN 201
           NV+V +S VRG+GVNLSS A   LI+S K+R V  KVEI  PIK+K+G+VK+WK+RVKV 
Sbjct: 181 NVTVFQSSVRGSGVNLSSQASKALIDSQKRRAVPFKVEIRAPIKLKIGSVKTWKIRVKVT 240

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BLAST of MELO3C015630.2.1 vs. NCBI nr
Match: XP_023516684.1 (NDR1/HIN1-like protein 13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.9 bits (520), Expect = 2.5e-49
Identity = 145/266 (54.51%), Postives = 167/266 (62.78%), Query Frame = 0


Query: 1   MADRVHPTVDSPRPSTSSTLSDTTKP------PSPPPGTYVIQLPKDQIYRVPPPENAHR 60
           MADRVHP  +SPRPSTSS +SD+  P      P+P PGTYVIQLPKDQIYRVPPPENAHR
Sbjct: 1   MADRVHP-AESPRPSTSSAVSDSKPPSPSADKPTPAPGTYVIQLPKDQIYRVPPPENAHR 60

Query: 61  FQLYTRQXXXXXXXXXXXXXXXXXXXXXXXXXXGITVAVFYLVVRPKSPNYSIDAIS--- 120
           F+LYTR+        XXXXXXXXXXXXXXXXXXGI VA+FYLVVRPKSPNYSIDAI+   
Sbjct: 61  FELYTRR-KNRRSRCXXXXXXXXXXXXXXXXXXGIAVAIFYLVVRPKSPNYSIDAIAIRG 120

Query: 121 ---------------------------------------------------------PAK 180
                                                                    PA 
Sbjct: 121 LNSTASSSSAISPVFDVAVRADNPNKKIGIYYQTDSSVQIYFSDEKLSDGVLPAFFQPAN 180

Query: 181 NVSVLRSVVRGTGVNLSSGAKNGLIESVKQRVVVLKVEIGVPIKVKVGAVKSWKMRVKVN 201
           NV+V +S VRG+GVNLS  A   LI+S K+R V  KVEI  PIK+K+G+VK+WK+RVKV 
Sbjct: 181 NVTVFQSSVRGSGVNLSKQASKALIDSQKRRAVPFKVEIRAPIKLKIGSVKTWKIRVKVT 240

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BLAST of MELO3C015630.2.1 vs. NCBI nr
Match: XP_022961077.1 (NDR1/HIN1-like protein 13 [Cucurbita moschata])

HSP 1 Score: 202.6 bits (514), Expect = 1.3e-48
Identity = 145/266 (54.51%), Postives = 165/266 (62.03%), Query Frame = 0


Query: 1   MADRVHPTVDSPRPSTSSTLSDTTKP------PSPPPGTYVIQLPKDQIYRVPPPENAHR 60
           MADRVHP  +SPRPSTSS +SD+  P      P+P PGTYVIQLPKDQIYRVPPPENAHR
Sbjct: 1   MADRVHP-AESPRPSTSSAVSDSKPPSPSADKPTPAPGTYVIQLPKDQIYRVPPPENAHR 60

Query: 61  FQLYTRQXXXXXXXXXXXXXXXXXXXXXXXXXXGITVAVFYLVVRPKSPNYSIDAIS--- 120
           F+LYTR+        XXXXXXXXXXXXXXXXXXGI VA+FYLVVRPKSPNYSIDAI+   
Sbjct: 61  FELYTRR-KNRRSRCXXXXXXXXXXXXXXXXXXGIAVAIFYLVVRPKSPNYSIDAIAIRG 120

Query: 121 ---------------------------------------------------------PAK 180
                                                                    PA 
Sbjct: 121 LNSTASSSSAISPVFDVAVRADNPNKKIGIYYQTDSSVQIYFSDEKLSDGVLPAFFQPAN 180

Query: 181 NVSVLRSVVRGTGVNLSSGAKNGLIESVKQRVVVLKVEIGVPIKVKVGAVKSWKMRVKVN 201
           NV+V +S VRG+GVNLS  A   LI+S K+R V   VEI  PIK+K+G+VK+WK+RVKV 
Sbjct: 181 NVTVFQSSVRGSGVNLSKQASKALIDSQKRRAVPFTVEIRAPIKLKIGSVKTWKIRVKVT 240

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BLAST of MELO3C015630.2.1 vs. TAIR10
Match: AT2G27080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 132.9 bits (333), Expect = 2.2e-31
Identity = 85/261 (32.57%), Postives = 126/261 (48.28%), Query Frame = 0


Query: 1   MADRVHPTVDSPRP---STSSTLSDTTKPPSPPPGTYVIQLPKDQIYRVPPPENAHRFQL 60
           MA+RV+P    P+    S + +  +  K P+PPP TYVIQ+PKDQIYR+PPPENAHRF+ 
Sbjct: 1   MAERVYPADSPPQSGQFSGNFSSGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENAHRFEQ 60

Query: 61  YTRQXXXXXXXXXXXXXXXXXXXXXXXXXXGITVAVFYLVVRPKSPNYSIDAIS------ 120
            +R+                          GI+ AV YL+ RP++P YSI+  S      
Sbjct: 61  LSRK-KTNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINL 120

Query: 121 ----------------------------------------------------PAKNVSVL 180
                                                               PAKNV+V+
Sbjct: 121 NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVV 180

Query: 181 RSVVRGTGVNLSSGAKNGLIESVKQRVVVLKVEIGVPIKVKVGAVKSWKMRVKVNCDVTV 201
           + V+ G+ + L+SG +  +   V ++ V  K++I  P+K+K G+VK+W M V V+CDVTV
Sbjct: 181 KLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTV 240

[Close]

BLAST of MELO3C015630.2.1 vs. TAIR10
Match: AT5G21130.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 107.1 bits (266), Expect = 1.3e-23
Identity = 76/253 (30.04%), Postives = 112/253 (44.27%), Query Frame = 0


Query: 6   HPTVDSPRPSTSSTLSDTTKPP-SPPPGTYVIQLPKDQIYRVPPPENAHRFQLYTRQXXX 65
           HP++D+   S+S    D+ K    PPPGTYVI+LPKDQIYRVPPPENAHR++ Y  +   
Sbjct: 29  HPSLDTNDSSSSRYSVDSQKSRIGPPPGTYVIKLPKDQIYRVPPPENAHRYE-YLSRRKT 88

Query: 66  XXXXXXXXXXXXXXXXXXXXXXXGITVAVFYLVVRPKSPNYSIDAIS------------- 125
                                   I    FYLV +P  P +S+  +S             
Sbjct: 89  NKSCCRRCLCYSLSALLIIIVLAAIAFGFFYLVYQPHKPQFSVSGVSVTGINLTSSSPFS 148

Query: 126 ---------------------------------------------PAKNVSVLRSVVRGT 185
                                                        PA NV+V+ +V++G+
Sbjct: 149 PVIRIKLRSQNVKGKLGLIYEKGNEADVFFNGTKLGNGEFTAFKQPAGNVTVIVTVLKGS 208

Query: 186 GVNLSSGAKNGLIESVKQRVVVLKVEIGVPIKVKVGAVKSWKMRVKVNCDVTVDELTTAA 200
            V L S ++  L ES K+  V   + I  P+K KVG+V +W M + V+C +TVD+LT +A
Sbjct: 209 SVKLKSSSRKELTESQKKGKVPFGLRIKAPVKFKVGSVTTWTMTITVDCKITVDKLTASA 268

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BLAST of MELO3C015630.2.1 vs. Swiss-Prot
Match: sp|Q9ZVD2|NHL13_ARATH (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.0e-30
Identity = 85/261 (32.57%), Postives = 126/261 (48.28%), Query Frame = 0


Query: 1   MADRVHPTVDSPRP---STSSTLSDTTKPPSPPPGTYVIQLPKDQIYRVPPPENAHRFQL 60
           MA+RV+P    P+    S + +  +  K P+PPP TYVIQ+PKDQIYR+PPPENAHRF+ 
Sbjct: 1   MAERVYPADSPPQSGQFSGNFSSGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENAHRFEQ 60

Query: 61  YTRQXXXXXXXXXXXXXXXXXXXXXXXXXXGITVAVFYLVVRPKSPNYSIDAIS------ 120
            +R+                          GI+ AV YL+ RP++P YSI+  S      
Sbjct: 61  LSRK-KTNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINL 120

Query: 121 ----------------------------------------------------PAKNVSVL 180
                                                               PAKNV+V+
Sbjct: 121 NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVV 180

Query: 181 RSVVRGTGVNLSSGAKNGLIESVKQRVVVLKVEIGVPIKVKVGAVKSWKMRVKVNCDVTV 201
           + V+ G+ + L+SG +  +   V ++ V  K++I  P+K+K G+VK+W M V V+CDVTV
Sbjct: 181 KLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTV 240

[Close]

BLAST of MELO3C015630.2.1 vs. TrEMBL
Match: tr|A0A1S3BRG5|A0A1S3BRG5_CUCME (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103492469 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 5.5e-77
Identity = 199/261 (76.25%), Postives = 199/261 (76.25%), Query Frame = 0


Query: 1   MADRVHPTVDSPRPSTSSTLSDTTKPPSPPPGTYVIQLPKDQIYRVPPPENAHRFQLYTR 60
           MADRVHPTVDSPRPSTSSTLSDTTKPPSPPPGTYVIQLPKDQIYRVPPPENAHRFQLYTR
Sbjct: 1   MADRVHPTVDSPRPSTSSTLSDTTKPPSPPPGTYVIQLPKDQIYRVPPPENAHRFQLYTR 60

Query: 61  QXXXXXXXXXXXXXXXXXXXXXXXXXXGITVAVFYLVVRPKSPNYSIDAIS--------- 120
           QXXXXXXXXXXXXXXXXXXXXXXXXXX ITVAVFYLVVRPKSPNYSIDAIS         
Sbjct: 61  QXXXXXXXXXXXXXXXXXXXXXXXXXXXITVAVFYLVVRPKSPNYSIDAISVSGLNLLTS 120

Query: 121 ----------------------------------------------------PAKNVSVL 180
                                                               PAKNVSVL
Sbjct: 121 SSSSAISPLFNLTVRADNPNKKIGIYYLTGSSVRIYFSNEKLSEGVLPDFFQPAKNVSVL 180

Query: 181 RSVVRGTGVNLSSGAKNGLIESVKQRVVVLKVEIGVPIKVKVGAVKSWKMRVKVNCDVTV 201
           RSVVRGTGVNLSSGAKNGLIESVKQRVVVLKVEIGVPIKVKVGAVKSWKMRVKVNCDVTV
Sbjct: 181 RSVVRGTGVNLSSGAKNGLIESVKQRVVVLKVEIGVPIKVKVGAVKSWKMRVKVNCDVTV 240

[Close]

BLAST of MELO3C015630.2.1 vs. TrEMBL
Match: tr|A0A0A0LX01|A0A0A0LX01_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G601000 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 3.2e-69
Identity = 178/258 (68.99%), Postives = 189/258 (73.26%), Query Frame = 0


Query: 1   MADRVHPTVDSPRPSTSSTLSDTTKPPSPPPGTYVIQLPKDQIYRVPPPENAHRFQLYTR 60
           MADRVHPT DSPRPSTSSTLSDTTKP SPPPGTYVIQLPKDQIYR+PPPENAHRF+LYTR
Sbjct: 1   MADRVHPTADSPRPSTSSTLSDTTKPSSPPPGTYVIQLPKDQIYRLPPPENAHRFKLYTR 60

Query: 61  QXXXXXXXXXXXXXXXXXXXXXXXXXXGITVAVFYLVVRPKSPNYSIDAIS--------- 120
           Q   XXXXXXXXXXXXXXXXXXXXXXXGIT+AVFY VVRPKSPNYSIDAIS         
Sbjct: 61  QSHRXXXXXXXXXXXXXXXXXXXXXXXGITLAVFYFVVRPKSPNYSIDAISISGLNNLTS 120

Query: 121 -------------------------------------------------PAKNVSVLRSV 180
                                                            P+KNVSVLR+V
Sbjct: 121 SAISPVFNLSVRADNPNKKIGIYYLTGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAV 180

Query: 181 VRGTGVNLSSGAKNGLIESVKQRVVVLKVEIGVPIKVKVGAVKSWKMRVKVNCDVTVDEL 201
           VRG GVNLSSGAKN +IE VKQR V+LKVEIGVPIKVK+G+VKSWK++VKVNCDVTVDEL
Sbjct: 181 VRGAGVNLSSGAKNEIIEWVKQRAVLLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDEL 240

[Close]

BLAST of MELO3C015630.2.1 vs. TrEMBL
Match: tr|A0A2P4LCW8|A0A2P4LCW8_QUESU (Ndr1/hin1-like protein 13 OS=Quercus suber OX=58331 GN=CFP56_69029 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.0e-35
Identity = 100/272 (36.76%), Postives = 135/272 (49.63%), Query Frame = 0


Query: 1   MADRVHPTVDSPRP-----STSSTLSDTTKP--------------PSPPPGTYVIQLPKD 60
           MADRVHP  DSP P     +   T S++++P              P PPPGTYVI +PKD
Sbjct: 1   MADRVHPR-DSPPPQPPVSANDETSSESSEPMLTLATRPNPCPDKPVPPPGTYVIHIPKD 60

Query: 61  QIYRVPPPENAHRFQLYTRQXXXXXXXXXXXXXXXXXXXXXXXXXXGITVAVFYLVVRPK 120
           Q+YRVPPPENA+R+Q  TR+                           ++ A+FYLVV+P+
Sbjct: 61  QVYRVPPPENANRYQALTRKSKTRRRPCCRCLCWSLGILAFLLALLAVSAAIFYLVVKPR 120

Query: 121 SPNYSIDAIS-------------------------------------------------- 180
           SPNYS+DAIS                                                  
Sbjct: 121 SPNYSVDAISVSGLNLTAADAAASTASLKVSPEFDVTVRADNPNDKIGIYYEPKSSVEIY 180

Query: 181 ---PAKNVSVLRSVVRGTGVNLSSGAKNGLIESVKQRVVVLKVEIGVPIKVKVGAVKSWK 201
              P+ NV+V  + ++G+GV L+S  KN L+++  Q  V L + +  P+K+KVG+VKSW 
Sbjct: 181 YDDPSNNVTVFETALKGSGVVLTSTVKNSLLQAQSQGKVPLLLTVRAPVKIKVGSVKSWT 240

[Close]

BLAST of MELO3C015630.2.1 vs. TrEMBL
Match: tr|A0A2I4HR92|A0A2I4HR92_9ROSI (protein YLS9-like OS=Juglans regia OX=51240 GN=LOC109020608 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.7e-31
Identity = 95/278 (34.17%), Postives = 130/278 (46.76%), Query Frame = 0


Query: 1   MADRVHPTVDSPRP-------------STSSTLSDTTKPPSPPPGTYVIQLPKDQIYRVP 60
           MADRVHP  DSPRP             +T  ++S  +  P P PGTYVI +PKDQ+YRVP
Sbjct: 1   MADRVHPR-DSPRPEAGPEDNFSESSETTLKSVSPDSDKPLPQPGTYVIHIPKDQVYRVP 60

Query: 61  PPENAHRFQLYTRQXXXXXXXXXXXXXXXXXXXXXXXXXXGITVAVFYLVVRPKSPNYSI 120
           PPENA R+Q   R+                           +   +FYLVV+P+SPNYS+
Sbjct: 61  PPENASRYQHLARR-SNRRRPCCLCLCWSFALLAIFLVLSAVAAGIFYLVVKPESPNYSV 120

Query: 121 DAI--------------------------------------------------------- 180
            AI                                                         
Sbjct: 121 KAIIIRGLNLTXXXXXXXXVQMVSPEFDITVRSDNPNDKIGIYYQKDSSVEIFYSDVRLC 180

Query: 181 --------SPAKNVSVLRSVVRGTGVNLSSGAKNGLIESVKQRVVVLKVEIGVPIKVKVG 201
                    P+ NV+V  + ++G+G+ LS   KN L+E+ K+  V L ++I  P+K+KVG
Sbjct: 181 NGVLPVFYQPSNNVTVFHTTLKGSGIELSGTVKNSLVEAQKRGEVPLDLKIRAPVKIKVG 240

[Close]

BLAST of MELO3C015630.2.1 vs. TrEMBL
Match: tr|A0A1Q2T819|A0A1Q2T819_LOTJA (Avr9/Cf-9 rapidly elicited protein OS=Lotus japonicus OX=34305 GN=LjACRE76 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.3e-30
Identity = 91/263 (34.60%), Postives = 125/263 (47.53%), Query Frame = 0


Query: 1   MADRVHPTVDSPRPSTSSTLSDTTKPPSPPPGTYVIQLPKDQIYRVPPPENAHRFQLYTR 60
           MADRVHP    P  + S      ++ P+ P GTYVIQ+PKDQ+YRVPPPENA R+  Y R
Sbjct: 1   MADRVHPHTSPPASAESQPAPPPSEKPASPTGTYVIQIPKDQVYRVPPPENARRYANYNR 60

Query: 61  QXXXXXXXXXXXXXXXXXXXXXXXXXXGITVAVFYLVVRPKSPNYSID------------ 120
           +                          GI   VFYLV RPK+PNYSI             
Sbjct: 61  R-KTRRCGFCCCLCWLIGLLFIFLILLGIAAGVFYLVFRPKAPNYSIQTVSVKGMNLTSP 120

Query: 121 ------AISP---------------------------------------------AKNVS 180
                 AISP                                             + NV+
Sbjct: 121 SPSSAAAISPEFDVAVRANNGNDKIGIYYLKGSSVEMFYRDSRLCGGALPAFYQASNNVT 180

Query: 181 VLRSVVRGTGVNLSSGAKNGLIESVKQRVVVLKVEIGVPIKVKVGAVKSWKMRVKVNCDV 201
           V ++V++G GV L+   +  L+ +V +R V L +++  P+K+KVG+VK+WK+ VKV+CDV
Sbjct: 181 VFKAVLKGDGVELAGSDRTALVNAVAKRSVPLTMKLRAPVKIKVGSVKTWKITVKVDCDV 240

The following BLAST results are available for this feature:

BLAST of MELO3C015630.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451090.1	8.3e-77	76.25	PREDICTED: protein YLS9-like [Cucumis melo]	[more]
XP_004144152.1	4.9e-69	68.99	PREDICTED: protein YLS9-like [Cucumis sativus] >KGN66410.1 hypothetical protein ...	[more]
XP_022988187.1	1.0e-50	55.26	NDR1/HIN1-like protein 13 [Cucurbita maxima]	[more]
XP_023516684.1	2.5e-49	54.51	NDR1/HIN1-like protein 13 [Cucurbita pepo subsp. pepo]	[more]
XP_022961077.1	1.3e-48	54.51	NDR1/HIN1-like protein 13 [Cucurbita moschata]	[more]

BLAST of MELO3C015630.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27080.1	2.2e-31	32.57	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G21130.1	1.3e-23	30.04	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

BLAST of MELO3C015630.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZVD2\|NHL13_ARATH	4.0e-30	32.57	NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1	[more]

BLAST of MELO3C015630.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BRG5\|A0A1S3BRG5_CUCME	5.5e-77	76.25	protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103492469 PE=4 SV=1	[more]
tr\|A0A0A0LX01\|A0A0A0LX01_CUCSA	3.2e-69	68.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G601000 PE=4 SV=1	[more]
tr\|A0A2P4LCW8\|A0A2P4LCW8_QUESU	4.0e-35	36.76	Ndr1/hin1-like protein 13 OS=Quercus suber OX=58331 GN=CFP56_69029 PE=4 SV=1	[more]
tr\|A0A2I4HR92\|A0A2I4HR92_9ROSI	2.7e-31	34.17	protein YLS9-like OS=Juglans regia OX=51240 GN=LOC109020608 PE=4 SV=1	[more]
tr\|A0A1Q2T819\|A0A1Q2T819_LOTJA	1.3e-30	34.60	Avr9/Cf-9 rapidly elicited protein OS=Lotus japonicus OX=34305 GN=LjACRE76 PE=2 ...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C015630.2	MELO3C015630.2	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C015630.2.1.five_prime_UTR.1	MELO3C015630.2.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C015630.2.1.exon.2	MELO3C015630.2.1.exon.2	exon
MELO3C015630.2.1.exon.1	MELO3C015630.2.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C015630.2.1.CDS.2	MELO3C015630.2.1.CDS.2	CDS
MELO3C015630.2.1.CDS.1	MELO3C015630.2.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C015630.2.1	MELO3C015630.2.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 21..111 coord: 112..198
None	No IPR available	PANTHER	PTHR31852:SF0	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED	coord: 112..198
None	No IPR available	PANTHER	PTHR31852:SF0	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED	coord: 21..111