MELO3C015599T4 (mRNA) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGACCACTCTTGTGTCAAGTCCACCGCCATGATTTCCCCAGATGAAGCTCTTAAAACTGTGCTGGAAGTCGCTCAATGCCTCCCCCCTATCGTCGTCTCTCTTCACGATGCTATTGGGAAGGTCTTGGCTCAAGACATTCGCGCTTCTGACCCTTTGCCCCCTTATCCAGCCTCCATTAAGGTACTTTCACACTATAGTGAGCTTAATTTTTGTTCAGGATTGGTCGTTTCCTTAGTTGGCCGGAAGAAAATTTGGTTGCTCTGTGTGTAGCTGGTGGACTTTGCTTTGTGGGGTTCATTGTTTTTTGGTTTTTGATCGAAAGAAATGAAATGATGTCTTCAGATTATTATTGTTATTTTTAATACCAAAGTAGTGGCTTTCATCGAGGAAAAATGAAATGAAAGGGACGCTCTTTACAAGAAGGGGCTCTAACTATGTGAAATCATGTATAGAGAATGATTGCAAAAGGTCTTCGAAGTTAAAGCTCAAAGGAAAACATGAAATTAACAAAGGGACTGAAGCTCCCTAGAATTCGTGTGTACTCCCTAAACACCCTATTCCTTCCACTTACCGCATAAAACCCATAAAACTGCAGTGACTTCAGCAAGCGAAGGGAACCGACCTTTTTTTTTCTTTTTTCCCAAAAAACTGACCGAGGAGCTCCTCGATCATAGCTCCAATGTCTCTAATGTGAGTGCTCGCCATACCAAACGTCTGGAAGGAGGAACCCCAAACACCACTCGCCAAGTTGTTGCGCCAGAGCATATGATTCAAGTCTTCCACCGCCTTAGGACAAATAATACGACAAAATGCCTCAACATGCTTGTCAGAAGTTGCCTTTGCTAGTTGGTTCTTGGTTTTAGTGGAGCTGATAGATTAATTGATGTAGCGGAAAACAAATTAGTCCTAATCTTAATTAATCAAGTCAATCTAACTAAACTAAGGAAACTAATTCTAATCCTAGTAAACCGATGAAATAATGCTAGTCCTAATCAATTAAAAGTTTCACCAAGATATTCTAATTTACTACAATCCTACTACATCATTATCTTTCAGTGGATTTTCTCTCTTGCTTTGCTTTCTGAGGAAGCAATTATGTTATAAATTAACGTCTACTTTGGGAAATTCTGATTCAACTGTAATGCCTAGATTCATAACGCTCACGTAATCTCTCTTTGTAGGATGGCTATGCAGTGGTTGCTTCAGATGGGCCTGGGGAGTATCCGGTGATTATAGAATCTAGAGCTGGGAATGATGGAGTTGGTGTGACAGTTACTCCAGGAACCGTTGCCTATGTAACCACTGGAGGTGCTTTTCTGATCATATTTGAATCATAAACAAGTTTCCATTTTGTAGTTAGCATATGGTGAATAGGACTTATGCTAGGAGTATATTTTTTGGTAGATTACATCACATATTTGCTCAATATAATTCGTAAAAGATTTGGTATTCGCATTTGATAGAGCATCTACTGATTAAGTAGTGTAGTTAATCACCTTTTCTTGATGAAAATTCTGAAAGGAGTTCTTGTTGATGTACCGATAGTATCATTACAAGTGAACTTTGAATGGAGAATAATTGATATTTTCACCAACTTCACGAGATAATTGCTTTTCTAAGCTTTTTGATGACTGAAGTATTCAAGGTCTGCCTTGGAGGGAGTTGATAAGGATGGTACTTAGCACTTTGTTAGCTGGAACAAATTTGTTGCCTCCACTGAATTTTATGGTCTACCTTTGGAGGAATTGCTAAAGTTAAAAATAACACAACCCTTTTACTCAAATGGCTGTTGAGCTTCTCTGCACAGGAAATTAACTTTTTGGATAAACTGATGGTTAATTTTTAGGAAGAAACCTAGATGTTTTTTCTCTATCCATCGCCACTTTGCAAGTTGGAGCCTAGAAGTGAACTTTTAGTCTGTGGAAAAGGACATGGACAAACATGACTTTATTTGGGATGATTTTTGGTCTTTAGGTCTTGTGTGGAGCAATGAGGTAAGGATTTGATCCAAAATGTTCAAGCCCATCATCATTATACTTGGAGTGATGAGGAAATTTGGGAGGGCCATAGCCCCAAGAAGATCAAATTCTTTATCTGGTCAGCAGTTTGACAACCGAAATACCCCCTCAAAGTGTAGAGAAGAAATCCAGTTTTTACACTCCCTAAATCTGCCCATTATGTTTCAAGAATGAAGGGACCCCTAACGTCCTCTTTACACACTGCAGTTTGCTTTGTCTTCTATTCTTGCGAGGGTGGAATTTTATCTCTGAACCATTTGAGTTTGTCTTGCCCCTTGTGGTGGAAGATGACCTTTCTAAATGGTTCTCCGGCTGGTAGTTTAAGGATAAATCCAGGTTTCCATGGTTGAGTGTGGTCTTGGGCTCTCGGCTCTCCATGGCTTCTTTCAAAAGAAAGAAACTCTTGAATATTTTTAGATCAGTATGATTTTTCTGTTAATTTTTGCGTCTGTGTATAGTGTTTGACCTTCAACTTGAGTGCTCCTCACAAATATTTGTAATATTTCTATCATTCTCATCAACTTTGAAGGTATTTTGTTCAACTCCTCCTTTTTTGGTGTGGATTCATCTTGTCTTTACGGCCTTCAGGTTGTTTTTCTGAGAGTTGGAGTGATGAAATCCAATCTATAGTTGTGTGAACTTTTTCAATTTGAATTAAGATTGATCCTATAATTTTTTTGAGCAAATTGCAAAAACCACCCCTAAAATTTGGTGGTGGGAGTAGCAATTTATCCTCAAACTTGCAATGGTAAAAATTGAGTGCTTGAACTTATACAAGTGTTAAAACTGAACCCTCAAACTTGCATAATTGTAGAAATTTTAGCAATTATATGAATTTATTTTGAGCAAATTGCAAAAACCACCCCTAAAGTATGGTGGTGGTAGTAGCAATTTATCCTCAAACTTCTAATTGTAAAAATTGAGTTCTTGAACTTATACACATGTTAAAATTGAACCCTTGAACTTGCATAATTGTAGAAATTGTAGCAGTTATATGAATTTGAGGGTTCGATTTTTATCATTTGGGGGTCCAATTTCAACTGCCATCATAAGCTTTAAGTTCCAATTTTAACACTTATATAAGTTCCAGGGCTCAATTTTTACTACTGAAAGTTTGAGGGTGTAATTGCAACTACCGTCATACTTCAGGGATGAATTTTGCAATGTGTCATTTTTTTCAAGAAAAGGTGCTTGTGTTATGTTTTCTTCTTTTTCCTTATTGCAACTTTTTATTCACCTTCTGTAATTCCGATTCATTCTTGTTGTTACATTTTTAAGGACCAATACCTGATGGTGCTGATGCGGTAGTTCAAGTTGAGGACACCGAAAAAATTGAATCCAAGCGTGTTAAAATAAAAGTGAAAGCCAGGAAGGGTGCTGATATCCGCCCCGTGGTATTAGTTCATTACTTTTTTTTTCTTTTTTTTTCTTCTTATAATTAAATAATAAATTAAGCACTATTTTGTTGAAAGGTTCTACCACAATGACAATTACTTTGTTAGGCAAGAAAATTTTCCTTCATAGAATATCAACACAAAAAATTCCAACGGACAGTAATTACTGA ATGGCGGACCACTCTTGTGTCAAGTCCACCGCCATGATTTCCCCAGATGAAGCTCTTAAAACTGTGCTGGAAGTCGCTCAATGCCTCCCCCCTATCGTCGTCTCTCTTCACGATGCTATTGGGAAGGTCTTGGCTCAAGACATTCGCGCTTCTGACCCTTTGCCCCCTTATCCAGCCTCCATTAAGGATGGCTATGCAGTGGTTGCTTCAGATGGGCCTGGGGAGTATCCGGTGATTATAGAATCTAGAGCTGGGAATGATGGAGTTGGTGTGACAGTTACTCCAGGAACCGTTGCCTATGTAACCACTGGAGGACCAATACCTGATGGTGCTGATGCGGTAGTTCAAGTTGAGGACACCGAAAAAATTGAATCCAAGCGTGTTAAAATAAAAGTGAAAGCCAGGAAGGGTGCTGAAAAAATTCCAACGGACAGTAATTACTGA ATGGCGGACCACTCTTGTGTCAAGTCCACCGCCATGATTTCCCCAGATGAAGCTCTTAAAACTGTGCTGGAAGTCGCTCAATGCCTCCCCCCTATCGTCGTCTCTCTTCACGATGCTATTGGGAAGGTCTTGGCTCAAGACATTCGCGCTTCTGACCCTTTGCCCCCTTATCCAGCCTCCATTAAGGATGGCTATGCAGTGGTTGCTTCAGATGGGCCTGGGGAGTATCCGGTGATTATAGAATCTAGAGCTGGGAATGATGGAGTTGGTGTGACAGTTACTCCAGGAACCGTTGCCTATGTAACCACTGGAGGACCAATACCTGATGGTGCTGATGCGGTAGTTCAAGTTGAGGACACCGAAAAAATTGAATCCAAGCGTGTTAAAATAAAAGTGAAAGCCAGGAAGGGTGCTGAAAAAATTCCAACGGACAGTAATTACTGA MADHSCVKSTAMISPDEALKTVLEVAQCLPPIVVSLHDAIGKVLAQDIRASDPLPPYPASIKDGYAVVASDGPGEYPVIIESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDTEKIESKRVKIKVKARKGAEKIPTDSNY*
BLAST of MELO3C015599T4 vs. Swiss-Prot
Match: CNX1_ARATH (Molybdopterin biosynthesis protein CNX1 OS=Arabidopsis thaliana GN=CNX1 PE=1 SV=2) HSP 1 Score: 201.4 bits (511), Expect = 6.7e-51 Identity = 100/135 (74.07%), Postives = 115/135 (85.19%), Query Frame = 1
BLAST of MELO3C015599T4 vs. Swiss-Prot
Match: GEPH_CHICK (Gephyrin OS=Gallus gallus GN=GPHN PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.4e-27 Identity = 72/138 (52.17%), Postives = 88/138 (63.77%), Query Frame = 1
BLAST of MELO3C015599T4 vs. Swiss-Prot
Match: GEPH_HUMAN (Gephyrin OS=Homo sapiens GN=GPHN PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.4e-27 Identity = 72/138 (52.17%), Postives = 88/138 (63.77%), Query Frame = 1
BLAST of MELO3C015599T4 vs. Swiss-Prot
Match: GEPH_MOUSE (Gephyrin OS=Mus musculus GN=Gphn PE=1 SV=2) HSP 1 Score: 124.0 bits (310), Expect = 1.4e-27 Identity = 72/138 (52.17%), Postives = 88/138 (63.77%), Query Frame = 1
BLAST of MELO3C015599T4 vs. Swiss-Prot
Match: GEPH_RAT (Gephyrin OS=Rattus norvegicus GN=Gphn PE=1 SV=3) HSP 1 Score: 124.0 bits (310), Expect = 1.4e-27 Identity = 72/138 (52.17%), Postives = 88/138 (63.77%), Query Frame = 1
BLAST of MELO3C015599T4 vs. TrEMBL
Match: A0A0A0LZS5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600220 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 8.4e-69 Identity = 135/142 (95.07%), Postives = 138/142 (97.18%), Query Frame = 1
BLAST of MELO3C015599T4 vs. TrEMBL
Match: A0A061GVL5_THECC (Molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1) isoform 3 OS=Theobroma cacao GN=TCM_041148 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 7.2e-52 Identity = 111/151 (73.51%), Postives = 123/151 (81.46%), Query Frame = 1
BLAST of MELO3C015599T4 vs. TrEMBL
Match: A0A061GUP2_THECC (Molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1) isoform 1 OS=Theobroma cacao GN=TCM_041148 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 7.2e-52 Identity = 111/151 (73.51%), Postives = 123/151 (81.46%), Query Frame = 1
BLAST of MELO3C015599T4 vs. TrEMBL
Match: B9RQ35_RICCO (Molybdopterin biosynthesis protein, putative OS=Ricinus communis GN=RCOM_0953150 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 1.6e-51 Identity = 110/140 (78.57%), Postives = 120/140 (85.71%), Query Frame = 1
BLAST of MELO3C015599T4 vs. TrEMBL
Match: A0A067L376_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23858 PE=4 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 2.7e-51 Identity = 109/136 (80.15%), Postives = 118/136 (86.76%), Query Frame = 1
BLAST of MELO3C015599T4 vs. TAIR10
Match: AT5G20990.1 (AT5G20990.1 molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1)) HSP 1 Score: 201.4 bits (511), Expect = 3.8e-52 Identity = 100/135 (74.07%), Postives = 115/135 (85.19%), Query Frame = 1
BLAST of MELO3C015599T4 vs. NCBI nr
Match: gi|659100319|ref|XP_008451034.1| (PREDICTED: molybdopterin biosynthesis protein CNX1 [Cucumis melo]) HSP 1 Score: 275.4 bits (703), Expect = 5.8e-71 Identity = 139/142 (97.89%), Postives = 140/142 (98.59%), Query Frame = 1
BLAST of MELO3C015599T4 vs. NCBI nr
Match: gi|778663355|ref|XP_011660066.1| (PREDICTED: molybdopterin biosynthesis protein CNX1 [Cucumis sativus]) HSP 1 Score: 267.7 bits (683), Expect = 1.2e-68 Identity = 135/142 (95.07%), Postives = 138/142 (97.18%), Query Frame = 1
BLAST of MELO3C015599T4 vs. NCBI nr
Match: gi|700211286|gb|KGN66382.1| (hypothetical protein Csa_1G600220 [Cucumis sativus]) HSP 1 Score: 267.7 bits (683), Expect = 1.2e-68 Identity = 135/142 (95.07%), Postives = 138/142 (97.18%), Query Frame = 1
BLAST of MELO3C015599T4 vs. NCBI nr
Match: gi|590585889|ref|XP_007015553.1| (Molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1) isoform 3 [Theobroma cacao]) HSP 1 Score: 211.5 bits (537), Expect = 1.0e-51 Identity = 111/151 (73.51%), Postives = 123/151 (81.46%), Query Frame = 1
BLAST of MELO3C015599T4 vs. NCBI nr
Match: gi|590585881|ref|XP_007015551.1| (Molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1) isoform 1 [Theobroma cacao]) HSP 1 Score: 211.5 bits (537), Expect = 1.0e-51 Identity = 111/151 (73.51%), Postives = 123/151 (81.46%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
|